BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041655
(238 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 109/226 (48%), Gaps = 29/226 (12%)
Query: 30 MQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWL 89
+Q ++E+ + HRN+L L P LLVY +M NGS+ L + + LDW
Sbjct: 80 LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP 139
Query: 90 ARYRTVRGIASGLEYLHMH-----------QALVLLDHDMEARISEFGLAKVFPEAHTHI 138
R R G A GL YLH H A +LLD + EA + +FGLAK+ H+
Sbjct: 140 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHV 199
Query: 139 TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE-----------------EMSLVK 181
+ V GT G+IAPEY T + D++ +GV+L E ++ L+
Sbjct: 200 XXA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 258
Query: 182 WMRNVMTSENPKRAIDSKLLGNGYEEQMLLVLKTACFCTLDDPKER 227
W++ ++ + + +D L GN +E++ +++ A CT P ER
Sbjct: 259 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMER 304
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 29/226 (12%)
Query: 30 MQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWL 89
+Q ++E+ + HRN+L L P LLVY +M NGS+ L + + LDW
Sbjct: 72 LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP 131
Query: 90 ARYRTVRGIASGLEYLHMH-----------QALVLLDHDMEARISEFGLAKVFPEAHTHI 138
R R G A GL YLH H A +LLD + EA + +FGLAK+ H+
Sbjct: 132 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHV 191
Query: 139 TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE-----------------EMSLVK 181
+ V G G+IAPEY T + D++ +GV+L E ++ L+
Sbjct: 192 XXA-VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 250
Query: 182 WMRNVMTSENPKRAIDSKLLGNGYEEQMLLVLKTACFCTLDDPKER 227
W++ ++ + + +D L GN +E++ +++ A CT P ER
Sbjct: 251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMER 296
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 11/161 (6%)
Query: 24 LLTEEM-MQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRG 82
+ TEE+ Q EI + + +H N++ LL + LVY +M NGSL D L+ + G
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-G 126
Query: 83 RRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
L W R + +G A+G+ +LH + A +LLD A+IS+FGLA+ +
Sbjct: 127 TPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ S +VGT Y+APE + IT DIYSFGV+L E
Sbjct: 187 AQTVMXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLE 226
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 85/161 (52%), Gaps = 11/161 (6%)
Query: 24 LLTEEM-MQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRG 82
+ TEE+ Q EI + + +H N++ LL + LVY +M NGSL D L+ + G
Sbjct: 62 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-G 120
Query: 83 RRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
L W R + +G A+G+ +LH + A +LLD A+IS+FGLA+ +
Sbjct: 121 TPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +VGT Y+APE + IT DIYSFGV+L E
Sbjct: 181 AQXVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLE 220
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 85/161 (52%), Gaps = 11/161 (6%)
Query: 24 LLTEEM-MQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRG 82
+ TEE+ Q EI + + +H N++ LL + LVY +M NGSL D L+ + G
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-G 126
Query: 83 RRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
L W R + +G A+G+ +LH + A +LLD A+IS+FGLA+ +
Sbjct: 127 TPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +VGT Y+APE + IT DIYSFGV+L E
Sbjct: 187 AQTVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLE 226
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 24 LLTEEM-MQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRG 82
+ TEE+ Q EI + +H N++ LL + LVY + NGSL D L+ + G
Sbjct: 59 ITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD-G 117
Query: 83 RRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
L W R + +G A+G+ +LH + A +LLD A+IS+FGLA+ +
Sbjct: 118 TPPLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ S +VGT Y APE + IT DIYSFGV+L E
Sbjct: 178 AQXVXXSRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLE 217
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 13/164 (7%)
Query: 26 TEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQ 85
E + + E+ + ++RH NI+ + + +P +V E++ GSL +L+ S R Q
Sbjct: 75 AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK-SGAREQ 133
Query: 86 LDWLARYRTVRGIASGLEYLH------MHQAL----VLLDHDMEARISEFGLAKVFPEAH 135
LD R +A G+ YLH +H+ L +L+D ++ +FGL+++ +A
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KAS 191
Query: 136 THITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
T +++ GT ++APE + D+YSFGV+L E +L
Sbjct: 192 TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATL 235
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGL 102
RH +++ L+ +L+Y++M+NG+L+ L + W R G A GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 103 EYLHMHQAL--------VLLDHDMEARISEFGLAKVFPE-AHTHITTSDVVGTAGYIAPE 153
YLH + +LLD + +I++FG++K E TH+ V GT GYI PE
Sbjct: 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV-VKGTLGYIDPE 211
Query: 154 YQQTLSITYMCDIYSFGVLLAE 175
Y +T D+YSFGV+L E
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFE 233
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGL 102
RH +++ L+ +L+Y++M+NG+L+ L + W R G A GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 103 EYLHMHQAL--------VLLDHDMEARISEFGLAKVFPE-AHTHITTSDVVGTAGYIAPE 153
YLH + +LLD + +I++FG++K E TH+ V GT GYI PE
Sbjct: 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV-VKGTLGYIDPE 211
Query: 154 YQQTLSITYMCDIYSFGVLLAE 175
Y +T D+YSFGV+L E
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFE 233
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 92/175 (52%), Gaps = 14/175 (8%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
SE +GQ H N++ L + + +++ EFM+NGSL L + Q +
Sbjct: 57 SEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR---QNDGQFTVIQLVG 113
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVG 145
+RGIA+G++YL ++H+AL +L++ ++ ++S+FGL++ + + T + +G
Sbjct: 114 MLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 173
Query: 146 TA---GYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAID 197
+ APE Q T D++S+G+++ E MS + MT+++ AI+
Sbjct: 174 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE 228
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 26 TEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQ 85
E + + E+ + ++RH NI+ + + +P +V E++ GSL +L+ S R Q
Sbjct: 75 AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK-SGAREQ 133
Query: 86 LDWLARYRTVRGIASGLEYLH------MHQAL----VLLDHDMEARISEFGLAKVFPEAH 135
LD R +A G+ YLH +H+ L +L+D ++ +FGL+++ +A
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KAS 191
Query: 136 THITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ + GT ++APE + D+YSFGV+L E +L
Sbjct: 192 XFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATL 235
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 14/175 (8%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
SE +GQ H N++ L + + +++ EFM+NGSL L + Q +
Sbjct: 83 SEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR---QNDGQFTVIQLVG 139
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVG 145
+RGIA+G++YL ++H+ L +L++ ++ ++S+FGL++ + + T + +G
Sbjct: 140 MLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 199
Query: 146 TA---GYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAID 197
+ APE Q T D++S+G+++ E MS + MT+++ AI+
Sbjct: 200 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE 254
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
E +GQ H NI+ L + + ++V E+M+NGSL L + Q +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVG 151
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RGIASG++YL ++H+ L +L++ ++ ++S+FGLA+V PEA TT
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEA--AYTTRG 209
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAID 197
+ +PE T D++S+G++L E MS + M++++ +A+D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 92/174 (52%), Gaps = 16/174 (9%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E +GQ H N++ L + R ++V EFM+NG+L L + Q +
Sbjct: 94 EASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLR---KHDGQFTVIQLVGM 150
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSDV 143
+RGIA+G+ YL ++H+ L +L++ ++ ++S+FGL++V PEA + TT
Sbjct: 151 LRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEA-VYTTTGGK 209
Query: 144 VGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAID 197
+ + APE Q T D++S+G+++ E MS + M++++ +AI+
Sbjct: 210 I-PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE 262
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
E +GQ H NI+ L + + ++V E+M+NGSL L + Q +
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVG 122
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RGIASG++YL ++H+ L +L++ ++ ++S+FGL++V PEA TT
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA--AYTTRG 180
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAID 197
+ +PE T D++S+G++L E MS + M++++ +A+D
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 235
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
E +GQ H NI+ L + + ++V E+M+NGSL L + Q +
Sbjct: 83 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVG 139
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RGIASG++YL ++H+ L +L++ ++ ++S+FGL++V PEA TT
Sbjct: 140 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA--AYTTRG 197
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAID 197
+ +PE T D++S+G++L E MS + M++++ +A+D
Sbjct: 198 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 252
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 84/156 (53%), Gaps = 16/156 (10%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
E +GQ H NI+ L +++ +++ E+M+NG+L L + + L
Sbjct: 95 GEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKD---GEFSVLQLVG 151
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RGIA+G++YL ++H+ L +L++ ++ ++S+FGL++V PEA T+ T+
Sbjct: 152 MLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-TYTTSGG 210
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ + APE T D++SFG+++ E M+
Sbjct: 211 KIPIR-WTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
E +GQ H NI+ L + + ++V E+M+NGSL L + Q +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVG 151
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RGIASG++YL ++H+ L +L++ ++ ++S+FGL++V PEA TT
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA--AYTTRG 209
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAID 197
+ +PE T D++S+G++L E MS + M++++ +A+D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
E +GQ H NI+ L + + ++V E+M+NGSL L + Q +
Sbjct: 93 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVG 149
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RGIASG++YL ++H+ L +L++ ++ ++S+FGL++V PEA TT
Sbjct: 150 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA--AYTTRG 207
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAID 197
+ +PE T D++S+G++L E MS + M++++ +A+D
Sbjct: 208 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 262
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
E +GQ H NI+ L + + ++V E+M+NGSL L + Q +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVG 151
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RGIASG++YL ++H+ L +L++ ++ ++S+FGL++V PEA TT
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA--AYTTRG 209
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAID 197
+ +PE T D++S+G++L E MS + M++++ +A+D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
E +GQ H NI+ L + + ++V E+M+NGSL L + Q +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVG 151
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RGIASG++YL ++H+ L +L++ ++ ++S+FGL++V PEA TT
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA--AYTTRG 209
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAID 197
+ +PE T D++S+G++L E MS + M++++ +A+D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
E +GQ H NI+ L + + ++V E+M+NGSL L + Q +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVG 151
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RGIASG++YL ++H+ L +L++ ++ ++S+FGL++V PEA TT
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA--AYTTRG 209
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAID 197
+ +PE T D++S+G++L E MS + M++++ +A+D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 33/222 (14%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL--NDVSRGRRQLDWLAR 91
SE +GQ H NI+ L + +++ EFM+NG+L L ND Q +
Sbjct: 66 SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLND-----GQFTVIQL 120
Query: 92 YRTVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDV 143
+RGIASG+ YL ++H+ L +L++ ++ ++S+FGL++ E + T +
Sbjct: 121 VGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSS 180
Query: 144 VGTA---GYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAIDSKL 200
+G + APE T D +S+G+++ E MS E P + ++
Sbjct: 181 LGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSF---------GERPYWDMSNQD 231
Query: 201 LGNGYEEQMLLVLKTACFCTLDD------PKERHVRCMLSQI 236
+ N E+ L C +L K+R+ R Q+
Sbjct: 232 VINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQV 273
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 16/175 (9%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
E +GQ H NI+ L + + ++V E+M+NGSL L + Q +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVG 151
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RGIASG++YL ++H+ L +L++ ++ ++S+FGL +V PEA TT
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA--AYTTRG 209
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAID 197
+ +PE T D++S+G++L E MS + M++++ +A+D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 33/222 (14%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL--NDVSRGRRQLDWLAR 91
SE +GQ H NI+ L + +++ EFM+NG+L L ND Q +
Sbjct: 64 SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLND-----GQFTVIQL 118
Query: 92 YRTVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDV 143
+RGIASG+ YL ++H+ L +L++ ++ ++S+FGL++ E + T +
Sbjct: 119 VGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS 178
Query: 144 VGTA---GYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAIDSKL 200
+G + APE T D +S+G+++ E MS E P + ++
Sbjct: 179 LGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSF---------GERPYWDMSNQD 229
Query: 201 LGNGYEEQMLLVLKTACFCTLDD------PKERHVRCMLSQI 236
+ N E+ L C +L K+R+ R Q+
Sbjct: 230 VINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQV 271
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 16/175 (9%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
E +GQ H NI+ L + + ++V E+M+NGSL L + Q +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVG 151
Query: 94 TVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RGIASG++YL +H+ L +L++ ++ ++S+FGL++V PEA TT
Sbjct: 152 MLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA--AYTTRG 209
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAID 197
+ +PE T D++S+G++L E MS + M++++ +A+D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 16/175 (9%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
E +GQ H NI+ L + + ++V E M+NGSL L + Q +
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR---KHDAQFTVIQLVG 122
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RGIASG++YL ++H+ L +L++ ++ ++S+FGL++V PEA TT
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA--AYTTRG 180
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAID 197
+ +PE T D++S+G++L E MS + M++++ +A+D
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 235
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 16/175 (9%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
E +GQ H NI+ L + + ++V E M+NGSL L + Q +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR---KHDAQFTVIQLVG 151
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RGIASG++YL ++H+ L +L++ ++ ++S+FGL++V PEA TT
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA--AYTTRG 209
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAID 197
+ +PE T D++S+G++L E MS + M++++ +A+D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 16/153 (10%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
SE +GQ H NI+ L + R ++V E+M+NGSL L Q +
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD---GQFTIMQLVG 155
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RG+ +G+ YL ++H+ L VL+D ++ ++S+FGL++V P+A T
Sbjct: 156 MLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGK 215
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ + APE + + D++SFGV++ E
Sbjct: 216 I--PIRWTAPEAIAFRTFSSASDVWSFGVVMWE 246
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VL 113
LV E++ GSL+D L G QL A+ I G+ YLH +H+AL VL
Sbjct: 89 LVMEYVPLGSLRDYLPRHCVGLAQLLLFAQ-----QICEGMAYLHAQHYIHRALAARNVL 143
Query: 114 LDHDMEARISEFGLAKVFPEAHTHI-TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
LD+D +I +FGLAK PE H + D + APE + Y D++SFGV
Sbjct: 144 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVT 203
Query: 173 LAE 175
L E
Sbjct: 204 LYE 206
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VL 113
LV E++ GSL+D L G QL A+ I G+ YLH +H+AL VL
Sbjct: 90 LVMEYVPLGSLRDYLPRHCVGLAQLLLFAQ-----QICEGMAYLHAQHYIHRALAARNVL 144
Query: 114 LDHDMEARISEFGLAKVFPEAHTHI-TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
LD+D +I +FGLAK PE H + D + APE + Y D++SFGV
Sbjct: 145 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVT 204
Query: 173 LAE 175
L E
Sbjct: 205 LYE 207
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 16/153 (10%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
SE +GQ H NI+ L + R ++V E+M+NGSL L Q +
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD---GQFTIMQLVG 155
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RG+ +G+ YL ++H+ L VL+D ++ ++S+FGL++V P+A + TT
Sbjct: 156 MLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA-AYTTTGG 214
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ + APE + + D++SFGV++ E
Sbjct: 215 KIPIR-WTAPEAIAFRTFSSASDVWSFGVVMWE 246
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VL 113
LV E++ GSL+D L S G QL A+ I G+ YLH +H+ L VL
Sbjct: 95 LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ-----QICEGMAYLHAQHYIHRNLAARNVL 149
Query: 114 LDHDMEARISEFGLAKVFPEAHTHI-TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
LD+D +I +FGLAK PE H + D + APE + Y D++SFGV
Sbjct: 150 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 209
Query: 173 LAE 175
L E
Sbjct: 210 LYE 212
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VL 113
LV E++ GSL+D L S G QL A+ I G+ YLH +H+ L VL
Sbjct: 95 LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ-----QICEGMAYLHSQHYIHRNLAARNVL 149
Query: 114 LDHDMEARISEFGLAKVFPEAHTHI-TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
LD+D +I +FGLAK PE H + D + APE + Y D++SFGV
Sbjct: 150 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 209
Query: 173 LAE 175
L E
Sbjct: 210 LYE 212
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 16/175 (9%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
E +GQ H NI+ L + + ++V E M+NGSL L + Q +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR---KHDAQFTVIQLVG 151
Query: 94 TVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RGIASG++YL +H+ L +L++ ++ ++S+FGL++V PEA TT
Sbjct: 152 MLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA--AYTTRG 209
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAID 197
+ +PE T D++S+G++L E MS + M++++ +A+D
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 80/181 (44%), Gaps = 20/181 (11%)
Query: 10 PPMDATALVEADSKLLTEEMMQIRS----EIVTLGQIRHRNILPLLAHLARPGCH--LLV 63
P D T + A L + Q RS EI L + H +I+ G LV
Sbjct: 54 PTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113
Query: 64 YEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLD 115
E++ GSL+D L S G QL A+ I G+ YLH +H+ L VLLD
Sbjct: 114 MEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHAQHYIHRDLAARNVLLD 168
Query: 116 HDMEARISEFGLAKVFPEAH-THITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLA 174
+D +I +FGLAK PE H + D + APE + Y D++SFGV L
Sbjct: 169 NDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 228
Query: 175 E 175
E
Sbjct: 229 E 229
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 16/156 (10%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
SE +GQ H NI+ L + + +++ E+M+NGSL L + GR + L
Sbjct: 58 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK-NDGRFTVIQLV--G 114
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RGI SG++YL ++H+ L +L++ ++ ++S+FG+++V PEA TT
Sbjct: 115 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA--AYTTRG 172
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ APE T D++S+G+++ E MS
Sbjct: 173 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 20/158 (12%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL--NDVSRGRRQLDWLAR 91
SE +GQ H NI+ L + + +++ E+M+NGSL L ND GR + L
Sbjct: 64 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKND---GRFTVIQLV- 119
Query: 92 YRTVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITT 140
+RGI SG++YL ++H+ L +L++ ++ ++S+FG+++V PEA TT
Sbjct: 120 -GMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA--AYTT 176
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ APE T D++S+G+++ E MS
Sbjct: 177 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
E +GQ H NI+ L + + ++V E+M+NGSL L + Q +
Sbjct: 72 GEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLK---KNDGQFTVIQLVG 128
Query: 94 TVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RGI++G++YL ++H+ L +L++ ++ ++S+FGL++V PEA TT
Sbjct: 129 MLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA--AYTTRG 186
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAID 197
+ APE T D++S+G+++ E +S + MT+++ +A++
Sbjct: 187 GKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVE 241
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 16/156 (10%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
SE +GQ H NI+ L + + +++ E+M+NGSL L + GR + L
Sbjct: 79 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK-NDGRFTVIQLV--G 135
Query: 94 TVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITTSD 142
+RGI SG++YL +H+ L +L++ ++ ++S+FG+++V PEA TT
Sbjct: 136 MLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA--AYTTRG 193
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ APE T D++S+G+++ E MS
Sbjct: 194 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 26/185 (14%)
Query: 3 AIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLL 62
AI+ I + D + D+K + + +I +EI L + H NI+ L L
Sbjct: 65 AIKVIKKSQFDKGRYSD-DNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYL 123
Query: 63 VYEFMKNGSL-QDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VL 113
V EF + G L + I+N R + D ++ I SG+ YLH H + +L
Sbjct: 124 VTEFYEGGELFEQIIN-----RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENIL 178
Query: 114 LDHD---MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITY--MCDIYS 168
L++ + +I +FGL+ F + + D +GTA YIAPE L Y CD++S
Sbjct: 179 LENKNSLLNIKIVDFGLSSFFSKDYK---LRDRLGTAYYIAPE---VLKKKYNEKCDVWS 232
Query: 169 FGVLL 173
GV++
Sbjct: 233 CGVIM 237
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+ I PP + E + + E+ Q+ H+NI+ ++ C+
Sbjct: 39 VAIKAIFIPPREKE-----------ETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYY 87
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VL 113
LV E+++ +L + + S G +D + I G+++ H +H+ + +L
Sbjct: 88 LVMEYIEGPTLSEYIE--SHGPLSVDTAINF--TNQILDGIKHAHDMRIVHRDIKPQNIL 143
Query: 114 LDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
+D + +I +FG+AK E T +T T+ V+GT Y +PE + + DIYS G++
Sbjct: 144 IDSNKTLKIFDFGIAKALSE--TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIV 201
Query: 173 LAE 175
L E
Sbjct: 202 LYE 204
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 75/152 (49%), Gaps = 23/152 (15%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E+ L Q+ H NI+ L G LV E G L D + +SR R + R
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI--ISRKR--FSEVDAARI 131
Query: 95 VRGIASGLEYLH----MHQAL----VLLD---HDMEARISEFGLAKVFPEAHTHITTSDV 143
+R + SG+ Y+H +H+ L +LL+ D RI +FGL+ F EA + D
Sbjct: 132 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKM--KDK 188
Query: 144 VGTAGYIAPEYQQTLSITY--MCDIYSFGVLL 173
+GTA YIAPE L TY CD++S GV+L
Sbjct: 189 IGTAYYIAPE---VLHGTYDEKCDVWSTGVIL 217
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
E+ + + H N+L + L + + E++K G+L+ I+ + Q W R
Sbjct: 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS---QYPWSQRVS 112
Query: 94 TVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVF------PEAHTHIT 139
+ IASG+ YLH +H+ L L+ + +++FGLA++ PE +
Sbjct: 113 FAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLK 172
Query: 140 TSD------VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
D VVG ++APE S D++SFG++L E
Sbjct: 173 KPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCE 214
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 75/152 (49%), Gaps = 23/152 (15%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E+ L Q+ H NI+ L G LV E G L D + +SR R + R
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI--ISRKR--FSEVDAARI 154
Query: 95 VRGIASGLEYLH----MHQAL----VLLD---HDMEARISEFGLAKVFPEAHTHITTSDV 143
+R + SG+ Y+H +H+ L +LL+ D RI +FGL+ F EA + D
Sbjct: 155 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKM--KDK 211
Query: 144 VGTAGYIAPEYQQTLSITY--MCDIYSFGVLL 173
+GTA YIAPE L TY CD++S GV+L
Sbjct: 212 IGTAYYIAPE---VLHGTYDEKCDVWSTGVIL 240
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 75/152 (49%), Gaps = 23/152 (15%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E+ L Q+ H NI+ L G LV E G L D + +SR R + R
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI--ISRKR--FSEVDAARI 155
Query: 95 VRGIASGLEYLH----MHQAL----VLLD---HDMEARISEFGLAKVFPEAHTHITTSDV 143
+R + SG+ Y+H +H+ L +LL+ D RI +FGL+ F EA + D
Sbjct: 156 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKM--KDK 212
Query: 144 VGTAGYIAPEYQQTLSITY--MCDIYSFGVLL 173
+GTA YIAPE L TY CD++S GV+L
Sbjct: 213 IGTAYYIAPE---VLHGTYDEKCDVWSTGVIL 241
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 34 SEIVTLGQIRHRNILPLLAHLAR-PGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY 92
+E + Q+RH N++ LL + G +V E+M GSL D L SRGR L
Sbjct: 54 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLL 111
Query: 93 RTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVV 144
+ + +EYL +H+ L VL+ D A++S+FGL K EA + T +
Sbjct: 112 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL- 167
Query: 145 GTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ APE + + + D++SFG+LL E S
Sbjct: 168 -PVKWTAPEALREAAFSTKSDVWSFGILLWEIYSF 201
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E+ L Q+ H NI+ L G LV E G L D + +SR R + R
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI--ISRKR--FSEVDAARI 137
Query: 95 VRGIASGLEYLHMHQAL--------VLLD---HDMEARISEFGLAKVFPEAHTHITTSDV 143
+R + SG+ Y+H ++ + +LL+ D RI +FGL+ F EA + D
Sbjct: 138 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKM--KDK 194
Query: 144 VGTAGYIAPEYQQTLSITY--MCDIYSFGVLL 173
+GTA YIAPE L TY CD++S GV+L
Sbjct: 195 IGTAYYIAPE---VLHGTYDEKCDVWSTGVIL 223
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 10 PPMDATALVEADSKLL--TEEMMQ-IRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVY 64
P D T V A KL TEE ++ EI L ++H NI+ G L+
Sbjct: 34 PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 93
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDH 116
E++ GSL+D L + + ++D + + I G+EYL ++H+ L +L+++
Sbjct: 94 EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVEN 150
Query: 117 DMEARISEFGLAKVFPEAHTHITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +I +FGL KV P+ + + + + APE + D++SFGV+L E
Sbjct: 151 ENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 210
Query: 176 EMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQMLLV 212
+ ++ S++P +++GN + QM++
Sbjct: 211 LFTYIE------KSKSPPAEF-MRMIGNDKQGQMIVF 240
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 16/152 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
+IR EI L RH +I+ L ++ P +V E++ G L D + GR LD
Sbjct: 62 KIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI--CKNGR--LDEKE 117
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
R + I SG++Y H H + VLLD M A+I++FGL+ + +
Sbjct: 118 SRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRX 174
Query: 143 VVGTAGYIAPEY-QQTLSITYMCDIYSFGVLL 173
G+ Y APE L DI+S GV+L
Sbjct: 175 SCGSPNYAAPEVISGRLYAGPEVDIWSSGVIL 206
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 16/155 (10%)
Query: 34 SEIVTLGQIRHRNILPLLAHLAR-PGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY 92
+E + Q+RH N++ LL + G +V E+M GSL D L SRGR L
Sbjct: 48 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLL 105
Query: 93 RTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVV 144
+ + +EYL +H+ L VL+ D A++S+FGL K EA + T +
Sbjct: 106 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL- 161
Query: 145 GTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ APE + + D++SFG+LL E S
Sbjct: 162 -PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 195
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 16/155 (10%)
Query: 34 SEIVTLGQIRHRNILPLLAHLAR-PGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY 92
+E + Q+RH N++ LL + G +V E+M GSL D L SRGR L
Sbjct: 63 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLL 120
Query: 93 RTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVV 144
+ + +EYL +H+ L VL+ D A++S+FGL K EA + T +
Sbjct: 121 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL- 176
Query: 145 GTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ APE + + D++SFG+LL E S
Sbjct: 177 -PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 10 PPMDATALVEADSKLL--TEEMMQ-IRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVY 64
P D T V A KL TEE ++ EI L ++H NI+ G L+
Sbjct: 33 PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 92
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDH 116
E++ GSL+D L + + ++D + + I G+EYL ++H+ L +L+++
Sbjct: 93 EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 149
Query: 117 DMEARISEFGLAKVFPEAHTHITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +I +FGL KV P+ + + + APE + D++SFGV+L E
Sbjct: 150 ENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 209
Query: 176 EMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQMLL 211
+ ++ S++P +++GN + QM++
Sbjct: 210 LFTYIE------KSKSPPAEF-MRMIGNDKQGQMIV 238
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 16/155 (10%)
Query: 34 SEIVTLGQIRHRNILPLLAHLAR-PGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY 92
+E + Q+RH N++ LL + G +V E+M GSL D L SRGR L
Sbjct: 235 AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLL 292
Query: 93 RTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVV 144
+ + +EYL +H+ L VL+ D A++S+FGL K EA + T +
Sbjct: 293 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL- 348
Query: 145 GTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ APE + + D++SFG+LL E S
Sbjct: 349 -PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 382
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 30/207 (14%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ R+E+ L + RH NIL + ++ + +V ++ + SL L+ V + Q+
Sbjct: 74 EQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLH-VQETKFQM 131
Query: 87 DWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEAHTHI 138
L R A G++YLH M + L + +I +FGLA V
Sbjct: 132 FQLI--DIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189
Query: 139 TTSDVVGTAGYIAPEY---QQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRA 195
G+ ++APE Q ++ D+YS+G++L E +MT E P
Sbjct: 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYE----------LMTGELPYSH 239
Query: 196 IDSK-----LLGNGYEEQMLLVLKTAC 217
I+++ ++G GY L L C
Sbjct: 240 INNRDQIIFMVGRGYASPDLSKLYKNC 266
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 10 PPMDATALVEADSKL---LTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVY 64
P D T V A KL E + EI L ++H NI+ G L+
Sbjct: 37 PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 96
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDH 116
E++ GSL+D L + + ++D + + I G+EYL ++H+ L +L+++
Sbjct: 97 EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 153
Query: 117 DMEARISEFGLAKVFPEAHTHITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +I +FGL KV P+ + + + APE + D++SFGV+L E
Sbjct: 154 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 213
Query: 176 EMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQMLL 211
+ ++ S++P +++GN + QM++
Sbjct: 214 LFTYIE------KSKSPPAEF-MRMIGNDKQGQMIV 242
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 10 PPMDATALVEADSKLL--TEEMMQ-IRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVY 64
P D T V A KL TEE ++ EI L ++H NI+ G L+
Sbjct: 32 PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 91
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDH 116
E++ GSL+D L + + ++D + + I G+EYL ++H+ L +L+++
Sbjct: 92 EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 148
Query: 117 DMEARISEFGLAKVFPEAHTHITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +I +FGL KV P+ + + + APE + D++SFGV+L E
Sbjct: 149 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 208
Query: 176 EMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQMLL 211
+ ++ S++P +++GN + QM++
Sbjct: 209 LFTYIE------KSKSPPAEF-MRMIGNDKQGQMIV 237
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 10 PPMDATALVEADSKL---LTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVY 64
P D T V A KL E + EI L ++H NI+ G L+
Sbjct: 33 PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 92
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDH 116
E++ GSL+D L + + ++D + + I G+EYL ++H+ L +L+++
Sbjct: 93 EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 149
Query: 117 DMEARISEFGLAKVFPEAHTHITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +I +FGL KV P+ + + + APE + D++SFGV+L E
Sbjct: 150 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 209
Query: 176 EMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQMLL 211
+ ++ S++P +++GN + QM++
Sbjct: 210 LFTYIE------KSKSPPAEF-MRMIGNDKQGQMIV 238
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 10 PPMDATALVEADSKLL--TEEMMQ-IRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVY 64
P D T V A KL TEE ++ EI L ++H NI+ G L+
Sbjct: 31 PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 90
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDH 116
E++ GSL+D L + + ++D + + I G+EYL ++H+ L +L+++
Sbjct: 91 EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 147
Query: 117 DMEARISEFGLAKVFPEAHTHITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +I +FGL KV P+ + + + APE + D++SFGV+L E
Sbjct: 148 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 207
Query: 176 EMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQMLL 211
+ ++ S++P +++GN + QM++
Sbjct: 208 LFTYIE------KSKSPPAEF-MRMIGNDKQGQMIV 236
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 10 PPMDATALVEADSKL---LTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVY 64
P D T V A KL E + EI L ++H NI+ G L+
Sbjct: 39 PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 98
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDH 116
E++ GSL+D L + + ++D + + I G+EYL ++H+ L +L+++
Sbjct: 99 EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 155
Query: 117 DMEARISEFGLAKVFPEAHTHITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +I +FGL KV P+ + + + APE + D++SFGV+L E
Sbjct: 156 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 215
Query: 176 EMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQMLL 211
+ ++ S++P +++GN + QM++
Sbjct: 216 LFTYIE------KSKSPPAEF-MRMIGNDKQGQMIV 244
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 30/158 (18%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVS-----RGRRQLDWL 89
E+ L ++ H NI+ L P C LV E+ + GSL ++L+ + W
Sbjct: 51 ELRQLSRVNHPNIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC 108
Query: 90 ARYRTVRGIASGLEYLHMHQALVLLDHDMEA------------RISEFGLAKVFPEAHTH 137
+ + G+ YLH Q L+ D++ +I +FG A + TH
Sbjct: 109 LQ------CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTH 159
Query: 138 ITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+T + G+A ++APE + + + CD++S+G++L E
Sbjct: 160 MTNNK--GSAAWMAPEVFEGSNYSEKCDVFSWGIILWE 195
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 30/158 (18%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVS-----RGRRQLDWL 89
E+ L ++ H NI+ L P C LV E+ + GSL ++L+ + W
Sbjct: 52 ELRQLSRVNHPNIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC 109
Query: 90 ARYRTVRGIASGLEYLHMHQALVLLDHDMEA------------RISEFGLAKVFPEAHTH 137
+ + G+ YLH Q L+ D++ +I +FG A + TH
Sbjct: 110 LQ------CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTH 160
Query: 138 ITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+T + G+A ++APE + + + CD++S+G++L E
Sbjct: 161 MTNNK--GSAAWMAPEVFEGSNYSEKCDVFSWGIILWE 196
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 10 PPMDATALVEADSKL---LTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVY 64
P D T V A KL E + EI L ++H NI+ G L+
Sbjct: 38 PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 97
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDH 116
E++ GSL+D L + + ++D + + I G+EYL ++H+ L +L+++
Sbjct: 98 EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 154
Query: 117 DMEARISEFGLAKVFPEAHTHITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +I +FGL KV P+ + + + APE + D++SFGV+L E
Sbjct: 155 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 214
Query: 176 EMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQMLL 211
+ ++ S++P +++GN + QM++
Sbjct: 215 LFTYIE------KSKSPPAEF-MRMIGNDKQGQMIV 243
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 10 PPMDATALVEADSKLL--TEEMMQ-IRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVY 64
P D T V A KL TEE ++ EI L ++H NI+ G L+
Sbjct: 51 PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 110
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDH 116
E++ GSL+D L + + ++D + + I G+EYL ++H+ L +L+++
Sbjct: 111 EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 167
Query: 117 DMEARISEFGLAKVFPEAHTHITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +I +FGL KV P+ + + + APE + D++SFGV+L E
Sbjct: 168 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 227
Query: 176 EMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQMLL 211
+ ++ S++P +++GN + QM++
Sbjct: 228 LFTYIE------KSKSPPAEF-MRMIGNDKQGQMIV 256
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 10 PPMDATALVEADSKL---LTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVY 64
P D T V A KL E + EI L ++H NI+ G L+
Sbjct: 36 PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 95
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDH 116
E++ GSL+D L + + ++D + + I G+EYL ++H+ L +L+++
Sbjct: 96 EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 152
Query: 117 DMEARISEFGLAKVFPEAHTHITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +I +FGL KV P+ + + + APE + D++SFGV+L E
Sbjct: 153 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 212
Query: 176 EMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQMLL 211
+ ++ S++P +++GN + QM++
Sbjct: 213 LFTYIE------KSKSPPAEF-MRMIGNDKQGQMIV 241
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 10 PPMDATALVEADSKLL--TEEMMQ-IRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVY 64
P D T V A KL TEE ++ EI L ++H NI+ G L+
Sbjct: 64 PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 123
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDH 116
E++ GSL+D L + + ++D + + I G+EYL ++H+ L +L+++
Sbjct: 124 EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 180
Query: 117 DMEARISEFGLAKVFPEAHTHITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +I +FGL KV P+ + + + APE + D++SFGV+L E
Sbjct: 181 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 240
Query: 176 EMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQMLL 211
+ ++ S++P +++GN + QM++
Sbjct: 241 LFTYIE------KSKSPPAEF-MRMIGNDKQGQMIV 269
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 71/152 (46%), Gaps = 23/152 (15%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E+ L Q+ H NI L G LV E G L D + +SR R + R
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI--ISRKR--FSEVDAARI 131
Query: 95 VRGIASGLEYLH----MHQAL----VLLD---HDMEARISEFGLAKVFPEAHTHITTSDV 143
+R + SG+ Y H +H+ L +LL+ D RI +FGL+ F + D
Sbjct: 132 IRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---XKDK 188
Query: 144 VGTAGYIAPEYQQTLSITY--MCDIYSFGVLL 173
+GTA YIAPE L TY CD++S GV+L
Sbjct: 189 IGTAYYIAPE---VLHGTYDEKCDVWSTGVIL 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 10 PPMDATALVEADSKL---LTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVY 64
P D T V A KL E + EI L ++H NI+ G L+
Sbjct: 33 PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 92
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDH 116
E++ GSL+D L + + ++D + + I G+EYL ++H+ L +L+++
Sbjct: 93 EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 149
Query: 117 DMEARISEFGLAKVFPEAHTHITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +I +FGL KV P+ + + + APE + D++SFGV+L E
Sbjct: 150 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 209
Query: 176 EMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQMLL 211
+ ++ S++P +++GN + QM++
Sbjct: 210 LFTYIE------KSKSPPAEF-MRMIGNDKQGQMIV 238
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 10 PPMDATALVEADSKL---LTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVY 64
P D T V A KL E + EI L ++H NI+ G L+
Sbjct: 51 PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 110
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDH 116
E++ GSL+D L + + ++D + + I G+EYL ++H+ L +L+++
Sbjct: 111 EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 167
Query: 117 DMEARISEFGLAKVFPEAHTHITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +I +FGL KV P+ + + + APE + D++SFGV+L E
Sbjct: 168 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 227
Query: 176 EMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQMLL 211
+ ++ S++P +++GN + QM++
Sbjct: 228 LFTYIE------KSKSPPAEF-MRMIGNDKQGQMIV 256
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 10 PPMDATALVEADSKLL--TEEMMQ-IRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVY 64
P D T V A KL TEE ++ EI L ++H NI+ G L+
Sbjct: 40 PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 99
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDH 116
E++ GSL+D L + + ++D + + I G+EYL ++H+ L +L+++
Sbjct: 100 EYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 156
Query: 117 DMEARISEFGLAKVFPEAHTHITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +I +FGL KV P+ + + + APE + D++SFGV+L E
Sbjct: 157 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 216
Query: 176 EMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQMLL 211
+ ++ S++P +++GN + QM++
Sbjct: 217 LFTYIE------KSKSPPAEF-MRMIGNDKQGQMIV 245
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 10 PPMDATALVEADSKL---LTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVY 64
P D T V A KL E + EI L ++H NI+ G L+
Sbjct: 36 PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 95
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDH 116
EF+ GSL++ L + + ++D + + I G+EYL ++H+ L +L+++
Sbjct: 96 EFLPYGSLREYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 152
Query: 117 DMEARISEFGLAKVFPEAHTHITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +I +FGL KV P+ + + + APE + D++SFGV+L E
Sbjct: 153 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 212
Query: 176 EMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQMLL 211
+ ++ S++P +++GN + QM++
Sbjct: 213 LFTYIE------KSKSPPAEF-MRMIGNDKQGQMIV 241
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 30/207 (14%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
+++ ++E+ L + RH NIL + + +P +V ++ + SL L+ + +
Sbjct: 46 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHII---ETKF 101
Query: 87 DWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHI 138
+ + R A G++YLH +H+ L + L D+ +I +FGLA V
Sbjct: 102 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161
Query: 139 TTSDVVGTAGYIAPEY---QQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRA 195
+ G+ ++APE Q ++ D+Y+FG++L E +MT + P
Sbjct: 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE----------LMTGQLPYSN 211
Query: 196 IDSK-----LLGNGYEEQMLLVLKTAC 217
I+++ ++G GY L +++ C
Sbjct: 212 INNRDQIIFMVGRGYLSPDLSKVRSNC 238
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 30/207 (14%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
+++ ++E+ L + RH NIL + + +P +V ++ + SL L+ + +
Sbjct: 48 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHII---ETKF 103
Query: 87 DWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHI 138
+ + R A G++YLH +H+ L + L D+ +I +FGLA V
Sbjct: 104 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 163
Query: 139 TTSDVVGTAGYIAPEY---QQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRA 195
+ G+ ++APE Q ++ D+Y+FG++L E +MT + P
Sbjct: 164 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE----------LMTGQLPYSN 213
Query: 196 IDSK-----LLGNGYEEQMLLVLKTAC 217
I+++ ++G GY L +++ C
Sbjct: 214 INNRDQIIFMVGRGYLSPDLSKVRSNC 240
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 25/181 (13%)
Query: 6 KIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYE 65
+I Q + +A +K ++ I E+ L ++ H NI+ L L +V E
Sbjct: 44 RITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLD-- 115
G L D + R++ R ++ + SG+ Y+H H + +LL+
Sbjct: 102 LYTGGELFDEI----IKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK 157
Query: 116 -HDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITY--MCDIYSFGVL 172
D + +I +FGL+ F + + D +GTA YIAPE L TY CD++S GV+
Sbjct: 158 EKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPE---VLRGTYDEKCDVWSAGVI 211
Query: 173 L 173
L
Sbjct: 212 L 212
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 30/207 (14%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
+++ ++E+ L + RH NIL + + +P +V ++ + SL L+ + +
Sbjct: 73 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIE---TKF 128
Query: 87 DWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHI 138
+ + R A G++YLH +H+ L + L D+ +I +FGLA V
Sbjct: 129 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 188
Query: 139 TTSDVVGTAGYIAPEY---QQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRA 195
+ G+ ++APE Q ++ D+Y+FG++L E +MT + P
Sbjct: 189 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE----------LMTGQLPYSN 238
Query: 196 IDSK-----LLGNGYEEQMLLVLKTAC 217
I+++ ++G GY L +++ C
Sbjct: 239 INNRDQIIFMVGRGYLSPDLSKVRSNC 265
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 25/181 (13%)
Query: 6 KIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYE 65
+I Q + +A +K ++ I E+ L ++ H NI+ L L +V E
Sbjct: 44 RITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLD-- 115
G L D + + R R AR ++ + SG+ Y+H H + +LL+
Sbjct: 102 LYTGGELFDEI--IKRKRFSEHDAAR--IIKQVFSGITYMHKHNIVHRDLKPENILLESK 157
Query: 116 -HDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITY--MCDIYSFGVL 172
D + +I +FGL+ F + + D +GTA YIAPE L TY CD++S GV+
Sbjct: 158 EKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPE---VLRGTYDEKCDVWSAGVI 211
Query: 173 L 173
L
Sbjct: 212 L 212
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 30/207 (14%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
+++ ++E+ L + RH NIL + + +P +V ++ + SL L+ + +
Sbjct: 51 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHII---ETKF 106
Query: 87 DWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHI 138
+ + R A G++YLH +H+ L + L D+ +I +FGLA V
Sbjct: 107 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 166
Query: 139 TTSDVVGTAGYIAPEY---QQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRA 195
+ G+ ++APE Q ++ D+Y+FG++L E +MT + P
Sbjct: 167 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE----------LMTGQLPYSN 216
Query: 196 IDSK-----LLGNGYEEQMLLVLKTAC 217
I+++ ++G GY L +++ C
Sbjct: 217 INNRDQIIFMVGRGYLSPDLSKVRSNC 243
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 25/181 (13%)
Query: 6 KIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYE 65
+I Q + +A +K ++ I E+ L ++ H NI+ L L +V E
Sbjct: 44 RITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLD-- 115
G L D + + R R AR ++ + SG+ Y+H H + +LL+
Sbjct: 102 LYTGGELFDEI--IKRKRFSEHDAAR--IIKQVFSGITYMHKHNIVHRDLKPENILLESK 157
Query: 116 -HDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITY--MCDIYSFGVL 172
D + +I +FGL+ F + + D +GTA YIAPE L TY CD++S GV+
Sbjct: 158 EKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPE---VLRGTYDEKCDVWSAGVI 211
Query: 173 L 173
L
Sbjct: 212 L 212
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 30/207 (14%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
+++ ++E+ L + RH NIL + + +P +V ++ + SL L+ + +
Sbjct: 74 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIE---TKF 129
Query: 87 DWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHI 138
+ + R A G++YLH +H+ L + L D+ +I +FGLA V
Sbjct: 130 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 189
Query: 139 TTSDVVGTAGYIAPEY---QQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRA 195
+ G+ ++APE Q ++ D+Y+FG++L E +MT + P
Sbjct: 190 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE----------LMTGQLPYSN 239
Query: 196 IDSK-----LLGNGYEEQMLLVLKTAC 217
I+++ ++G GY L +++ C
Sbjct: 240 INNRDQIIFMVGRGYLSPDLSKVRSNC 266
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 30/207 (14%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
+++ ++E+ L + RH NIL + + +P +V ++ + SL L+ + +
Sbjct: 51 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHII---ETKF 106
Query: 87 DWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHI 138
+ + R A G++YLH +H+ L + L D+ +I +FGLA V
Sbjct: 107 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 166
Query: 139 TTSDVVGTAGYIAPEY---QQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRA 195
+ G+ ++APE Q ++ D+Y+FG++L E +MT + P
Sbjct: 167 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE----------LMTGQLPYSN 216
Query: 196 IDSK-----LLGNGYEEQMLLVLKTAC 217
I+++ ++G GY L +++ C
Sbjct: 217 INNRDQIIFMVGRGYLSPDLSKVRSNC 243
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 39/213 (18%)
Query: 25 LTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRR 84
+++ + +R E ++H NI+ L + LV EF + G L +L S R
Sbjct: 46 ISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL---SGKRI 102
Query: 85 QLDWLARYRTVRGIASGLEYLHMHQALVLLDHDMEA-------------------RISEF 125
D L + IA G+ YLH + ++ D+++ +I++F
Sbjct: 103 PPDILVNWAV--QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160
Query: 126 GLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRN 185
GLA+ E H T G ++APE + + D++S+GVLL E
Sbjct: 161 GLAR---EWH-RTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWE---------- 206
Query: 186 VMTSENPKRAIDSKLLGNGYE-EQMLLVLKTAC 217
++T E P R ID + G ++ L + + C
Sbjct: 207 LLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTC 239
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Query: 10 PPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKN 69
P + A+ + + M ++ EI + Q H NI+ LV + +
Sbjct: 38 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97
Query: 70 GSLQDILND-VSRGRRQ---LDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHD 117
GS+ DI+ V++G + LD +R + GLEYLH + + +LL D
Sbjct: 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGED 157
Query: 118 MEARISEFGLAKVFPEAHTHITTSDV----VGTAGYIAPEY-QQTLSITYMCDIYSFGVL 172
+I++FG++ F IT + V VGT ++APE +Q + DI+SFG+
Sbjct: 158 GSVQIADFGVS-AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGIT 216
Query: 173 LAE 175
E
Sbjct: 217 AIE 219
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Query: 10 PPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKN 69
P + A+ + + M ++ EI + Q H NI+ LV + +
Sbjct: 33 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 92
Query: 70 GSLQDILND-VSRGRRQ---LDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHD 117
GS+ DI+ V++G + LD +R + GLEYLH + + +LL D
Sbjct: 93 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGED 152
Query: 118 MEARISEFGLAKVFPEAHTHITTSDV----VGTAGYIAPEY-QQTLSITYMCDIYSFGVL 172
+I++FG++ F IT + V VGT ++APE +Q + DI+SFG+
Sbjct: 153 GSVQIADFGVS-AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGIT 211
Query: 173 LAE 175
E
Sbjct: 212 AIE 214
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 24/184 (13%)
Query: 7 IVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHL-ARPGCHL-LVY 64
+V +D ++ EA+ ++L SE+ L +++H NI+ + R L +V
Sbjct: 34 LVWKELDYGSMTEAEKQMLV-------SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH---------MHQAL---- 111
E+ + G L ++ ++ R+ LD R + + L+ H +H+ L
Sbjct: 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 112 VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGV 171
V LD ++ +FGLA++ H + VGT Y++PE +S DI+S G
Sbjct: 147 VFLDGKQNVKLGDFGLARIL--NHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGC 204
Query: 172 LLAE 175
LL E
Sbjct: 205 LLYE 208
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 94/207 (45%), Gaps = 30/207 (14%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
+++ ++E+ L + RH NIL + + P +V ++ + SL L+ + +
Sbjct: 46 QQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHII---ETKF 101
Query: 87 DWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHI 138
+ + R A G++YLH +H+ L + L D+ +I +FGLA V
Sbjct: 102 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161
Query: 139 TTSDVVGTAGYIAPEY---QQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRA 195
+ G+ ++APE Q ++ D+Y+FG++L E +MT + P
Sbjct: 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE----------LMTGQLPYSN 211
Query: 196 IDSK-----LLGNGYEEQMLLVLKTAC 217
I+++ ++G GY L +++ C
Sbjct: 212 INNRDQIIFMVGRGYLSPDLSKVRSNC 238
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
+I+ EI L RH +I+ L ++ P +V E++ G L D + GR ++ +
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGR--VEEME 112
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
R + I S ++Y H H + VLLD M A+I++FGL+ + + D
Sbjct: 113 ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRD 169
Query: 143 VVGTAGYIAPEY-QQTLSITYMCDIYSFGVLL 173
G+ Y APE L DI+S GV+L
Sbjct: 170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVIL 201
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 10 PPMDATALVEADSKL---LTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVY 64
P D T V A KL E + EI L ++H NI+ G L+
Sbjct: 36 PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 95
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDH 116
E++ GSL+D L + ++D + + I G+EYL ++H+ L +L+++
Sbjct: 96 EYLPYGSLRDYLQAHAE---RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 152
Query: 117 DMEARISEFGLAKVFPEAHTHITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +I +FGL KV P+ + + + APE + D++SFGV+L E
Sbjct: 153 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 212
Query: 176 EMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQMLL 211
+ ++ S++P +++GN + QM++
Sbjct: 213 LFTYIE------KSKSPPAEF-MRMIGNDKQGQMIV 241
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 45 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 104
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R++++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 105 N--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 162
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 163 -TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 205
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 30/207 (14%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
+++ ++E+ L + RH NIL + + +P +V ++ + SL L+ + +
Sbjct: 46 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHII---ETKF 101
Query: 87 DWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHI 138
+ + R A G++YLH +H+ L + L D+ +I +FGLA
Sbjct: 102 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH 161
Query: 139 TTSDVVGTAGYIAPEY---QQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRA 195
+ G+ ++APE Q ++ D+Y+FG++L E +MT + P
Sbjct: 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE----------LMTGQLPYSN 211
Query: 196 IDSK-----LLGNGYEEQMLLVLKTAC 217
I+++ ++G GY L +++ C
Sbjct: 212 INNRDQIIFMVGRGYLSPDLSKVRSNC 238
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 46 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 105
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R++++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 106 N--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 163
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 164 -TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 30/207 (14%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
+++ ++E+ L + RH NIL + + +P +V ++ + SL L+ + +
Sbjct: 66 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIE---TKF 121
Query: 87 DWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHI 138
+ + R A G++YLH +H+ L + L D+ +I +FGLA
Sbjct: 122 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH 181
Query: 139 TTSDVVGTAGYIAPEY---QQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRA 195
+ G+ ++APE Q ++ D+Y+FG++L E +MT + P
Sbjct: 182 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE----------LMTGQLPYSN 231
Query: 196 IDSK-----LLGNGYEEQMLLVLKTAC 217
I+++ ++G GY L +++ C
Sbjct: 232 INNRDQIIFMVGRGYLSPDLSKVRSNC 258
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 30/207 (14%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
+++ ++E+ L + RH NIL + + +P +V ++ + SL L+ + +
Sbjct: 74 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIE---TKF 129
Query: 87 DWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHI 138
+ + R A G++YLH +H+ L + L D+ +I +FGLA
Sbjct: 130 EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH 189
Query: 139 TTSDVVGTAGYIAPEY---QQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRA 195
+ G+ ++APE Q ++ D+Y+FG++L E +MT + P
Sbjct: 190 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE----------LMTGQLPYSN 239
Query: 196 IDSK-----LLGNGYEEQMLLVLKTAC 217
I+++ ++G GY L +++ C
Sbjct: 240 INNRDQIIFMVGRGYLSPDLSKVRSNC 266
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
+I+ EI L RH +I+ L ++ P +V E++ G L D + GR ++ +
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGR--VEEME 112
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
R + I S ++Y H H + VLLD M A+I++FGL+ + + T+
Sbjct: 113 ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC- 171
Query: 143 VVGTAGYIAPEY-QQTLSITYMCDIYSFGVLL 173
G+ Y APE L DI+S GV+L
Sbjct: 172 --GSPNYAAPEVISGRLYAGPEVDIWSCGVIL 201
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 49 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 108
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R++++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 109 N--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 167 -TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 49 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC 108
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R++++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 109 N--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 167 -TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 24/184 (13%)
Query: 7 IVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHL-ARPGCHL-LVY 64
+V +D ++ EA+ ++L SE+ L +++H NI+ + R L +V
Sbjct: 34 LVWKELDYGSMTEAEKQMLV-------SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH---------MHQAL---- 111
E+ + G L ++ ++ R+ LD R + + L+ H +H+ L
Sbjct: 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 112 VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGV 171
V LD ++ +FGLA++ H VGT Y++PE +S DI+S G
Sbjct: 147 VFLDGKQNVKLGDFGLARIL--NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGC 204
Query: 172 LLAE 175
LL E
Sbjct: 205 LLYE 208
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 46 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 105
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R++++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 106 N--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 163
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 164 T-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 206
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 44 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 103
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R++++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 104 N--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 162 -TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 44 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 103
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R++++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 104 N--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 162 -TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 46 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 105
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R++++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 106 N--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 163
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 164 T-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 206
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 49 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 108
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R++++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 109 N--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 167 -TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 48 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 107
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R++++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 108 N--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 165
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 166 -TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 208
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 57 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 116
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R++++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 117 N--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 174
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 175 T-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 217
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 24/184 (13%)
Query: 7 IVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHL-ARPGCHL-LVY 64
+V +D ++ EA+ ++L SE+ L +++H NI+ + R L +V
Sbjct: 34 LVWKELDYGSMTEAEKQMLV-------SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH---------MHQAL---- 111
E+ + G L ++ ++ R+ LD R + + L+ H +H+ L
Sbjct: 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 112 VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGV 171
V LD ++ +FGLA++ H VGT Y++PE +S DI+S G
Sbjct: 147 VFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGC 204
Query: 172 LLAE 175
LL E
Sbjct: 205 LLYE 208
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 44 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 103
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R+++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 104 N--RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 162 T-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 44 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC 103
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R+++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 104 N--RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 162 T-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 44 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC 103
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R+++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 104 N--RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 162 T-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 44 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 103
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R+++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 104 N--RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 162 T-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 49 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 108
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R+++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 109 N--RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 167 -TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 248 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 307
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R++++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 308 N--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 365
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 366 -TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 408
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 290 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 349
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R++++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 350 N--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 407
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 408 -TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 450
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ Q +E + + H N+L LL R G L+V +MK+G L++ + + +
Sbjct: 74 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 133
Query: 87 DWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLAKVF--PEAHT 136
D + V A G++YL +H+ L +LD ++++FGLA+ E ++
Sbjct: 134 DLIGFGLQV---AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 190
Query: 137 HITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ ++A E QT T D++SFGVLL E M+
Sbjct: 191 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ Q +E + + H N+L LL R G L+V +MK+G L++ + + +
Sbjct: 71 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 130
Query: 87 DWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLAKVF--PEAHT 136
D + V A G++YL +H+ L +LD ++++FGLA+ E ++
Sbjct: 131 DLIGFGLQV---AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 187
Query: 137 HITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ ++A E QT T D++SFGVLL E M+
Sbjct: 188 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ Q +E + + H N+L LL R G L+V +MK+G L++ + + +
Sbjct: 75 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 134
Query: 87 DWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLA-----KVFPE 133
D + V A G+++L +H+ L +LD ++++FGLA K F
Sbjct: 135 DLIGFGLQV---AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDS 191
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
H V ++A E QT T D++SFGVLL E M+
Sbjct: 192 VHNKTGAKLPVK---WMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ Q +E + + H N+L LL R G L+V +MK+G L++ + + +
Sbjct: 93 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 152
Query: 87 DWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLAKVF--PEAHT 136
D + V A G++YL +H+ L +LD ++++FGLA+ E ++
Sbjct: 153 DLIGFGLQV---AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 209
Query: 137 HITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ ++A E QT T D++SFGVLL E M+
Sbjct: 210 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ Q +E + + H N+L LL R G L+V +MK+G L++ + + +
Sbjct: 66 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 125
Query: 87 DWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLAKVF--PEAHT 136
D + V A G++YL +H+ L +LD ++++FGLA+ E ++
Sbjct: 126 DLIGFGLQV---AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 182
Query: 137 HITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ ++A E QT T D++SFGVLL E M+
Sbjct: 183 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ Q +E + + H N+L LL R G L+V +MK+G L++ + + +
Sbjct: 75 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 134
Query: 87 DWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLA-----KVFPE 133
D + V A G+++L +H+ L +LD ++++FGLA K F
Sbjct: 135 DLIGFGLQV---AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 191
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
H V ++A E QT T D++SFGVLL E M+
Sbjct: 192 VHNKTGAKLPVK---WMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 45 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC 104
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R++++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 105 N--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 162
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + + APE + D+++FGVLL E
Sbjct: 163 -TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 205
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ Q +E + + H N+L LL R G L+V +MK+G L++ + + +
Sbjct: 92 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 151
Query: 87 DWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLAKVF--PEAHT 136
D + V A G++YL +H+ L +LD ++++FGLA+ E ++
Sbjct: 152 DLIGFGLQV---AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 208
Query: 137 HITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ ++A E QT T D++SFGVLL E M+
Sbjct: 209 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 49 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 108
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R++++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 109 N--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + + APE + D+++FGVLL E
Sbjct: 167 -TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ Q +E + + H N+L LL R G L+V +MK+G L++ + + +
Sbjct: 74 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 133
Query: 87 DWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLA-----KVFPE 133
D + V A G+++L +H+ L +LD ++++FGLA K F
Sbjct: 134 DLIGFGLQV---AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 190
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
H V ++A E QT T D++SFGVLL E M+
Sbjct: 191 VHNKTGAKLPVK---WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ Q +E + + H N+L LL R G L+V +MK+G L++ + + +
Sbjct: 72 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 131
Query: 87 DWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLA-----KVFPE 133
D + V A G+++L +H+ L +LD ++++FGLA K F
Sbjct: 132 DLIGFGLQV---AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 188
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
H V ++A E QT T D++SFGVLL E M+
Sbjct: 189 VHNKTGAKLPVK---WMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ Q +E + + H N+L LL R G L+V +MK+G L++ + + +
Sbjct: 133 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 192
Query: 87 DWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLA-----KVFPE 133
D + V A G+++L +H+ L +LD ++++FGLA K F
Sbjct: 193 DLIGFGLQV---AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 249
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
H V ++A E QT T D++SFGVLL E M+
Sbjct: 250 VHNKTGAKLPVK---WMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ Q +E + + H N+L LL R G L+V +MK+G L++ + + +
Sbjct: 74 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 133
Query: 87 DWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLA-----KVFPE 133
D + V A G+++L +H+ L +LD ++++FGLA K F
Sbjct: 134 DLIGFGLQV---AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 190
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
H V ++A E QT T D++SFGVLL E M+
Sbjct: 191 VHNKTGAKLPVK---WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ Q +E + + H N+L LL R G L+V +MK+G L++ + + +
Sbjct: 79 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 138
Query: 87 DWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLA-----KVFPE 133
D + V A G+++L +H+ L +LD ++++FGLA K F
Sbjct: 139 DLIGFGLQV---AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 195
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
H V ++A E QT T D++SFGVLL E M+
Sbjct: 196 VHNKTGAKLPVK---WMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ Q +E + + H N+L LL R G L+V +MK+G L++ + + +
Sbjct: 74 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 133
Query: 87 DWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLAKVF--PEAHT 136
D + V A G++YL +H+ L +LD ++++FGLA+ E ++
Sbjct: 134 DLIGFGLQV---AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 190
Query: 137 HITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ ++A E QT T D++SFGVLL E M+
Sbjct: 191 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ Q +E + + H N+L LL R G L+V +MK+G L++ + + +
Sbjct: 73 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 132
Query: 87 DWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLAKVF--PEAHT 136
D + V A G++YL +H+ L +LD ++++FGLA+ E ++
Sbjct: 133 DLIGFGLQV---AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 189
Query: 137 HITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ ++A E QT T D++SFGVLL E M+
Sbjct: 190 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ Q +E + + H N+L LL R G L+V +MK+G L++ + + +
Sbjct: 72 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 131
Query: 87 DWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLAKVF--PEAHT 136
D + V A G++YL +H+ L +LD ++++FGLA+ E ++
Sbjct: 132 DLIGFGLQV---AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 188
Query: 137 HITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ ++A E QT T D++SFGVLL E M+
Sbjct: 189 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ Q +E + + H N+L LL R G L+V +MK+G L++ + + +
Sbjct: 69 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 128
Query: 87 DWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLAKVF--PEAHT 136
D + V A G++YL +H+ L +LD ++++FGLA+ E ++
Sbjct: 129 DLIGFGLQV---AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 185
Query: 137 HITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ ++A E QT T D++SFGVLL E M+
Sbjct: 186 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 16/163 (9%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E+ Q +E + + H N+L LL R G L+V +MK+G L++ + + +
Sbjct: 73 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 132
Query: 87 DWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLAKVFPEAH--- 135
D + V A G++YL +H+ L +LD ++++FGLA+ +
Sbjct: 133 DLIGFGLQV---AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXS 189
Query: 136 THITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
H T + ++A E QT T D++SFGVLL E M+
Sbjct: 190 VHNKTGAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 251 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 310
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R+++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 311 N--RQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 368
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + D+++FGVLL E
Sbjct: 369 -TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 411
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 42 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 101
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R+++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 102 N--RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 159
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + + APE + D+++FGVLL E
Sbjct: 160 T-GDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 202
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 24/195 (12%)
Query: 61 LLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------V 112
V E++ G D++ + R R+ + AR+ + I+ L YLH + V
Sbjct: 86 FFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLHERGIIYRDLKLDNV 141
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
LLD + +++++G+ K TTS GT YIAPE + + D ++ GVL
Sbjct: 142 LLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVL 199
Query: 173 LAEEMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQML----LVLKTACFCTL---DDPK 225
+ E M+ V +S+NP + + L E+Q+ L +K A DPK
Sbjct: 200 MFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPK 259
Query: 226 ER---HVRCMLSQIQ 237
ER H + + IQ
Sbjct: 260 ERLGCHPQTGFADIQ 274
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 42 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 101
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R+++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 102 N--RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 159
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + + APE + D+++FGVLL E
Sbjct: 160 T-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 202
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 24/195 (12%)
Query: 61 LLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------V 112
V E++ G D++ + R R+ + AR+ + I+ L YLH + V
Sbjct: 129 FFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLHERGIIYRDLKLDNV 184
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
LLD + +++++G+ K TTS GT YIAPE + + D ++ GVL
Sbjct: 185 LLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVL 242
Query: 173 LAEEMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQM----LLVLKTACFCTL---DDPK 225
+ E M+ V +S+NP + + L E+Q+ L +K A DPK
Sbjct: 243 MFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPK 302
Query: 226 ER---HVRCMLSQIQ 237
ER H + + IQ
Sbjct: 303 ERLGCHPQTGFADIQ 317
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 24/195 (12%)
Query: 61 LLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------V 112
V E++ G D++ + R R+ + AR+ + I+ L YLH + V
Sbjct: 82 FFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLHERGIIYRDLKLDNV 137
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
LLD + +++++G+ K TTS GT YIAPE + + D ++ GVL
Sbjct: 138 LLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVL 195
Query: 173 LAEEMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQML----LVLKTACFCTL---DDPK 225
+ E M+ V +S+NP + + L E+Q+ L +K A DPK
Sbjct: 196 MFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPK 255
Query: 226 ER---HVRCMLSQIQ 237
ER H + + IQ
Sbjct: 256 ERLGCHPQTGFADIQ 270
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 14/141 (9%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGL 102
H + L P V EF+ G D++ + + RR + AR+ I S L
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGG---DLMFHIQKSRRFDEARARFYAAE-IISAL 137
Query: 103 EYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEY 154
+LH + VLLDH+ ++++FG+ K +TT+ GT YIAPE
Sbjct: 138 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPEI 195
Query: 155 QQTLSITYMCDIYSFGVLLAE 175
Q + D ++ GVLL E
Sbjct: 196 LQEMLYGPAVDWWAMGVLLYE 216
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 25/153 (16%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYR 93
E+ L + H NI+ L + LV E K G L D I++ R + + +
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH-----RMKFNEVDAAV 140
Query: 94 TVRGIASGLEYLHMH---------QALVLLDHDMEA--RISEFGLAKVFPEAHTHITTSD 142
++ + SG+ YLH H + L+L + +A +I +FGL+ VF +
Sbjct: 141 IIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKE 197
Query: 143 VVGTAGYIAPEYQQTLSITY--MCDIYSFGVLL 173
+GTA YIAPE L Y CD++S GV+L
Sbjct: 198 RLGTAYYIAPE---VLRKKYDEKCDVWSIGVIL 227
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL R ++ EFM G+L D L +
Sbjct: 42 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC 101
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R+++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 102 N--RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 159
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + + APE + D+++FGVLL E
Sbjct: 160 T-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 202
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 113 YAKNGCLLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 168
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S + D+++ G ++
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCII 224
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
+++ ++E+ L + RH NIL + + +P +V ++ + SL L+ S + ++
Sbjct: 50 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-ASETKFEM 107
Query: 87 DWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHI 138
L R A G++YLH +H+ L + L D +I +FGLA V
Sbjct: 108 KKLI--DIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSH 165
Query: 139 TTSDVVGTAGYIAPEY---QQTLSITYMCDIYSFGVLLAEEMS 178
+ G+ ++APE Q + ++ D+Y+FG++L E M+
Sbjct: 166 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 208
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 42 IRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASG 101
++H ++ L A + R ++ E+M GSL D L G+ L L + IA G
Sbjct: 65 LQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA--QIAEG 122
Query: 102 LEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPE 153
+ Y+ ++H+ L VL+ + +I++FGLA+V E + + + APE
Sbjct: 123 MAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPE 181
Query: 154 YQQTLSITYMCDIYSFGVLLAE 175
T D++SFG+LL E
Sbjct: 182 AINFGCFTIKSDVWSFGILLYE 203
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 114 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 169
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 170 MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII 225
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 110 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 165
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 166 MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII 221
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 91 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 146
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 147 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 202
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 90 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 145
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 146 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 201
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 89 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 144
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 145 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 200
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR----RQLDWL 89
+E + Q++H+ ++ L A + + +++ E+M+NGSL D L S + + LD
Sbjct: 62 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMA 120
Query: 90 ARYRTVRGIASGLEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTA 147
A+ Y+H + A +L+ + +I++FGLA++ E + +
Sbjct: 121 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPI 179
Query: 148 GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE + T D++SFG+LL E
Sbjct: 180 KWTAPEAINYGTFTIKSDVWSFGILLTE 207
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR----RQLDWL 89
+E + Q++H+ ++ L A + + +++ E+M+NGSL D L S + + LD
Sbjct: 63 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMA 121
Query: 90 ARYRTVRGIASGLEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTA 147
A+ Y+H + A +L+ + +I++FGLA++ E + +
Sbjct: 122 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPI 180
Query: 148 GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE + T D++SFG+LL E
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTE 208
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 88 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 143
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 144 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 199
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR----RQLDWL 89
+E + Q++H+ ++ L A + + +++ E+M+NGSL D L S + + LD
Sbjct: 57 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 90 ARYRTVRGIASGLEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTA 147
A+ Y+H + A +L+ + +I++FGLA++ E + +
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPI 174
Query: 148 GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE + T D++SFG+LL E
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTE 202
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 21/174 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I +EI+ + + ++ NI+ L +V E++ GSL D++ + Q+ + R
Sbjct: 64 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR 123
Query: 92 YRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGL-AKVFPEAHTHITTSD 142
LE+LH +Q + +LL D ++++FG A++ PE S+
Sbjct: 124 E-----CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SE 175
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAI 196
+VGT ++APE + DI+S G++ E + N ENP RA+
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN----ENPLRAL 225
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR----RQLDWL 89
+E + Q++H+ ++ L A + + +++ E+M+NGSL D L S + + LD
Sbjct: 67 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMA 125
Query: 90 ARYRTVRGIASGLEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTA 147
A+ Y+H + A +L+ + +I++FGLA++ E + +
Sbjct: 126 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPI 184
Query: 148 GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE + T D++SFG+LL E
Sbjct: 185 KWTAPEAINYGTFTIKSDVWSFGILLTE 212
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR----RQLDWL 89
+E + Q++H+ ++ L A + + +++ E+M+NGSL D L S + + LD
Sbjct: 52 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMA 110
Query: 90 ARYRTVRGIASGLEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTA 147
A+ Y+H + A +L+ + +I++FGLA++ E + +
Sbjct: 111 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPI 169
Query: 148 GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE + T D++SFG+LL E
Sbjct: 170 KWTAPEAINYGTFTIKSDVWSFGILLTE 197
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 113 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 168
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 118 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 173
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 174 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 229
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 95 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 150
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 151 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 206
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 114 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 169
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 170 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 225
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILN-----------DVSR-GRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L D++R Q+ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL + + VL+ + RI++FGLA+ + T++
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVL+ E +L
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 12/150 (8%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
+E + ++H ++ L A + + +++ EFM GSL D L ++ L L +
Sbjct: 59 AEANVMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFS 117
Query: 94 TVRGIASGL------EYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVG 145
IA G+ Y+H + A +L+ + +I++FGLA+V E + +
Sbjct: 118 A--QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKF 174
Query: 146 TAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE S T D++SFG+LL E
Sbjct: 175 PIKWTAPEAINFGSFTIKSDVWSFGILLME 204
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 113 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 168
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 113 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 168
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 111 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 166
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 167 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 113 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 168
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCII 224
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 113 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 168
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 17/123 (13%)
Query: 61 LLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------V 112
++ ++++ G L +L + +R + +A++ + LEYLH + +
Sbjct: 82 FMIMDYIEGGELFSLLR---KSQRFPNPVAKFYAAE-VCLALEYLHSKDIIYRDLKPENI 137
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
LLD + +I++FG AK P+ T + GT YIAPE T D +SFG+L
Sbjct: 138 LLDKNGHIKITDFGFAKYVPDV-----TYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGIL 192
Query: 173 LAE 175
+ E
Sbjct: 193 IYE 195
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 111 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 166
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 167 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 27 EEMMQIRSEIVTLGQI-RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILN-------- 77
E++ + SE+ + I +H+NI+ LL + G ++ E+ G+L++ L
Sbjct: 82 EDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 78 ---DVSR-GRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEF 125
D++R Q+ + +A G+EYL + + VL+ + +I++F
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 126 GLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
GLA+ + T++ ++APE T+ D++SFGVL+ E +L
Sbjct: 202 GLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR----RQLDWL 89
+E + Q++H+ ++ L A + + +++ E+M+NGSL D L S + + LD
Sbjct: 53 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMA 111
Query: 90 ARYRTVRGIASGLEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTA 147
A+ Y+H + A +L+ + +I++FGLA++ E + +
Sbjct: 112 AQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPI 170
Query: 148 GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE + T D++SFG+LL E
Sbjct: 171 KWTAPEAINYGTFTIKSDVWSFGILLTE 198
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 111 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 166
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 167 MHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 110 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 165
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 166 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 221
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 111 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 166
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 167 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 66 FMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHD 117
+ KNG L + + + R+ T I S LEYLH +H+ L +LL+ D
Sbjct: 116 YAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNED 171
Query: 118 MEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
M +I++FG AKV + VGTA Y++PE S D+++ G ++
Sbjct: 172 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 227
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
+R EI T+ +RH ++ L +++YEFM G L + + D + D
Sbjct: 95 VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD-EHNKMSEDEAVE 153
Query: 92 YRTVRGIASGLEYLHMHQA-LVLLD-----------HDMEARISEFGL-AKVFPEAHTHI 138
Y +R + GL HMH+ V LD E ++ +FGL A + P+ +
Sbjct: 154 Y--MRQVCKGL--CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 209
Query: 139 TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
TT GTA + APE + + Y D++S GVL
Sbjct: 210 TT----GTAEFAAPEVAEGKPVGYYTDMWSVGVL 239
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
+R EI T+ +RH ++ L +++YEFM G L + + D + D
Sbjct: 201 VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD-EHNKMSEDEAVE 259
Query: 92 YRTVRGIASGLEYLHMHQA-LVLLD-----------HDMEARISEFGL-AKVFPEAHTHI 138
Y +R + GL HMH+ V LD E ++ +FGL A + P+ +
Sbjct: 260 Y--MRQVCKGL--CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 315
Query: 139 TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
TT GTA + APE + + Y D++S GVL
Sbjct: 316 TT----GTAEFAAPEVAEGKPVGYYTDMWSVGVL 345
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 22 SKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSR 81
++L + + ++ E+ + + H NI+ L + LV E+ G + D L V+
Sbjct: 50 TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAH 107
Query: 82 GR-RQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFP 132
GR ++ + A++R I S ++Y H +H+ L +LLD DM +I++FG + F
Sbjct: 108 GRMKEKEARAKFRQ---IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
Query: 133 EAHTHITTSDVVGTAGYIAPE-YQQTLSITYMCDIYSFGVLL 173
+ + G+ Y APE +Q D++S GV+L
Sbjct: 165 FGN---KLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL------------NDVSRGRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L N QL
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 91 RYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL +H+ L VL+ D +I++FGLA+ + T++
Sbjct: 137 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVLL E +L
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 233
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 61 LLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------V 112
V E++ G D++ + R R+ + AR+ + I+ L YLH + V
Sbjct: 97 FFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLHERGIIYRDLKLDNV 152
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
LLD + +++++G+ K TTS GT YIAPE + + D ++ GVL
Sbjct: 153 LLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVL 210
Query: 173 LAEEMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQML----LVLKTACFCTL---DDPK 225
+ E M+ V +S+NP + + L E+Q+ + +K A DPK
Sbjct: 211 MFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKAASVLKSFLNKDPK 270
Query: 226 ER 227
ER
Sbjct: 271 ER 272
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 42 IRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASG 101
++H ++ L A + + ++ EFM GSL D L G+ L L + IA G
Sbjct: 64 LQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSA--QIAEG 121
Query: 102 LEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPE 153
+ Y+ ++H+ L VL+ + +I++FGLA+V E + + + APE
Sbjct: 122 MAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPE 180
Query: 154 YQQTLSITYMCDIYSFGVLLAE 175
T +++SFG+LL E
Sbjct: 181 AINFGCFTIKSNVWSFGILLYE 202
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 31/198 (15%)
Query: 3 AIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLL 62
A+ K+ + +TA + L++E ++I S LGQ H NI+ LL G L+
Sbjct: 75 AVLKVAVKMLKSTAHADEKEALMSE--LKIMSH---LGQ--HENIVNLLGACTHGGPVLV 127
Query: 63 VYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL----------- 111
+ E+ G D+LN + R R L+ + AS + LH +
Sbjct: 128 ITEYCCYG---DLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN 184
Query: 112 ----------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSIT 161
VLL + A+I +FGLA+ +I + ++APE T
Sbjct: 185 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT 244
Query: 162 YMCDIYSFGVLLAEEMSL 179
D++S+G+LL E SL
Sbjct: 245 VQSDVWSYGILLWEIFSL 262
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL------------NDVSRGRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L N QL
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 91 RYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL +H+ L VL+ D +I++FGLA+ + T++
Sbjct: 145 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVLL E +L
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 241
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILN-----------DVSR-GRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L D++R Q+ +
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL + + VL+ + +I++FGLA+ + T++
Sbjct: 146 LVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVL+ E +L
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 242
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL------------NDVSRGRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L N QL
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 91 RYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL +H+ L VL+ D +I++FGLA+ + T++
Sbjct: 141 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVLL E +L
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 237
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILN-----------DVSR-GRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L D++R Q+ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL + + VL+ + +I++FGLA+ + T++
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVL+ E +L
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I +EI+ + + ++ NI+ L +V E++ GSL D++ + Q+ + R
Sbjct: 65 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR 124
Query: 92 YRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGL-AKVFPEAHTHITTSD 142
LE+LH +Q + +LL D ++++FG A++ PE S
Sbjct: 125 E-----CLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---ST 176
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAI 196
+VGT ++APE + DI+S G++ E + N ENP RA+
Sbjct: 177 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN----ENPLRAL 226
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 22 SKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSR 81
++L + + ++ E+ + + H NI+ L + LV E+ G + D L V+
Sbjct: 50 TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAH 107
Query: 82 GR-RQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFP 132
GR ++ + A++R I S ++Y H +H+ L +LLD DM +I++FG + F
Sbjct: 108 GRMKEKEARAKFRQ---IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
Query: 133 EAHTHITTSDVVGTAGYIAPE-YQQTLSITYMCDIYSFGVLL 173
+ T G+ Y APE +Q D++S GV+L
Sbjct: 165 FGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILN-----------DVSR-GRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L D++R Q+ +
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL + + VL+ + +I++FGLA+ + T++
Sbjct: 205 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVL+ E +L
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 301
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL------------NDVSRGRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L N QL
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 91 RYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL +H+ L VL+ D +I++FGLA+ + T++
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVLL E +L
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL------------NDVSRGRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L N QL
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 91 RYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL +H+ L VL+ D +I++FGLA+ + T++
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVLL E +L
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR----RQLDWL 89
+E + Q++H+ ++ L A + + +++ E+M+NGSL D L S + + LD
Sbjct: 63 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMA 121
Query: 90 ARYRTVRGIASGLEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTA 147
A+ Y+H + A +L+ + +I++FGLA++ E +
Sbjct: 122 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPI 180
Query: 148 GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE + T D++SFG+LL E
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTE 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR----RQLDWL 89
+E + Q++H+ ++ L A + + +++ E+M+NGSL D L S + + LD
Sbjct: 59 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMA 117
Query: 90 ARYRTVRGIASGLEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTA 147
A+ Y+H + A +L+ + +I++FGLA++ E +
Sbjct: 118 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPI 176
Query: 148 GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE + T D++SFG+LL E
Sbjct: 177 KWTAPEAINYGTFTIKSDVWSFGILLTE 204
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I +EI+ + + ++ NI+ L +V E++ GSL D++ + Q+ + R
Sbjct: 65 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR 124
Query: 92 YRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGL-AKVFPEAHTHITTSD 142
LE+LH +Q + +LL D ++++FG A++ PE S
Sbjct: 125 E-----CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SX 176
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAI 196
+VGT ++APE + DI+S G++ E + N ENP RA+
Sbjct: 177 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN----ENPLRAL 226
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 22 SKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSR 81
++L + + ++ E+ + + H NI+ L + LV E+ G + D L V+
Sbjct: 50 TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAH 107
Query: 82 GR-RQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFP 132
GR ++ + A++R I S ++Y H +H+ L +LLD DM +I++FG + F
Sbjct: 108 GRMKEKEARAKFRQ---IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
Query: 133 EAHTHITTSDVVGTAGYIAPE-YQQTLSITYMCDIYSFGVLL 173
+ T G+ Y APE +Q D++S GV+L
Sbjct: 165 FGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILN-----------DVSR-GRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L D++R Q+ +
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL + + VL+ + +I++FGLA+ + T++
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVL+ E +L
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 22 SKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSR 81
++L + + ++ E+ + + H NI+ L + LV E+ G + D L V+
Sbjct: 50 TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAH 107
Query: 82 GR-RQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFP 132
GR ++ + A++R I S ++Y H +H+ L +LLD DM +I++FG + F
Sbjct: 108 GRMKEKEARAKFRQ---IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
Query: 133 EAHTHITTSDVVGTAGYIAPE-YQQTLSITYMCDIYSFGVLL 173
+ T G+ Y APE +Q D++S GV+L
Sbjct: 165 FGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR----RQLDWL 89
+E + Q++H+ ++ L A + + +++ E+M+NGSL D L S + + LD
Sbjct: 57 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 90 ARYRTVRGIASGLEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTA 147
A+ Y+H + A +L+ + +I++FGLA++ +A
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEX-TAREGAKFPI 174
Query: 148 GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE + T D++SFG+LL E
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTE 202
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I +EI+ + + ++ NI+ L +V E++ GSL D++ + Q+ + R
Sbjct: 64 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR 123
Query: 92 YRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGL-AKVFPEAHTHITTSD 142
LE+LH +Q + +LL D ++++FG A++ PE S
Sbjct: 124 E-----CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---ST 175
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAI 196
+VGT ++APE + DI+S G++ E + N ENP RA+
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN----ENPLRAL 225
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL------------NDVSRGRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L N QL
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 91 RYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL +H+ L VL+ D +I++FGLA+ + T++
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVLL E +L
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR----RQLDWL 89
+E + Q++H+ ++ L A + + +++ E+M+NGSL D L S + + LD
Sbjct: 66 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMA 124
Query: 90 ARYRTVRGIASGLEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTA 147
A+ Y+H + A +L+ + +I++FGLA++ E +
Sbjct: 125 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPI 183
Query: 148 GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE + T D++SFG+LL E
Sbjct: 184 KWTAPEAINYGTFTIKSDVWSFGILLTE 211
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 12/150 (8%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
+E + ++H ++ L A + + +++ EFM GSL D L ++ L L +
Sbjct: 232 AEANVMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFS 290
Query: 94 TVRGIASGL------EYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVG 145
IA G+ Y+H + A +L+ + +I++FGLA+V E + +
Sbjct: 291 AQ--IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKF 347
Query: 146 TAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE S T D++SFG+LL E
Sbjct: 348 PIKWTAPEAINFGSFTIKSDVWSFGILLME 377
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILN-----------DVSR-GRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L D++R Q+ +
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL + + VL+ + +I++FGLA+ + T++
Sbjct: 148 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVL+ E +L
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 244
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR----RQLDWL 89
+E + Q++H+ ++ L A + + +++ E+M+NGSL D L S + + LD
Sbjct: 58 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMA 116
Query: 90 ARYRTVRGIASGLEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTA 147
A+ Y+H + A +L+ + +I++FGLA++ E +
Sbjct: 117 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPI 175
Query: 148 GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE + T D++SFG+LL E
Sbjct: 176 KWTAPEAINYGTFTIKSDVWSFGILLTE 203
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL------------NDVSRGRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L N QL
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 91 RYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL +H+ L VL+ D +I++FGLA+ + T++
Sbjct: 144 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVLL E +L
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 240
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I +EI+ + + ++ NI+ L +V E++ GSL D++ + Q+ + R
Sbjct: 64 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR 123
Query: 92 YRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGL-AKVFPEAHTHITTSD 142
LE+LH +Q + +LL D ++++FG A++ PE S
Sbjct: 124 E-----CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SX 175
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAI 196
+VGT ++APE + DI+S G++ E + N ENP RA+
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN----ENPLRAL 225
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILN-----------DVSR-GRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L D++R Q+ +
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL + + VL+ + +I++FGLA+ + T++
Sbjct: 151 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVL+ E +L
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 247
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR----RQLDWL 89
+E + Q++H+ ++ L A + + +++ E+M+NGSL D L S + + LD
Sbjct: 57 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 90 ARYRTVRGIASGLEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTA 147
A+ Y+H + A +L+ + +I++FGLA++ E +
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPI 174
Query: 148 GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE + T D++SFG+LL E
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTE 202
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR----RQLDWL 89
+E + Q++H+ ++ L A + + +++ E+M+NGSL D L S + + LD
Sbjct: 57 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 90 ARYRTVRGIASGLEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTA 147
A+ Y+H + A +L+ + +I++FGLA++ E +
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPI 174
Query: 148 GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE + T D++SFG+LL E
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTE 202
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR----RQLDWL 89
+E + Q++H+ ++ L A + + +++ E+M+NGSL D L S + + LD
Sbjct: 65 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMA 123
Query: 90 ARYRTVRGIASGLEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTA 147
A+ Y+H + A +L+ + +I++FGLA++ E +
Sbjct: 124 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPI 182
Query: 148 GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE + T D++SFG+LL E
Sbjct: 183 KWTAPEAINYGTFTIKSDVWSFGILLTE 210
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL------------NDVSRGRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L N QL
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 91 RYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL +H+ L VL+ D +I++FGLA+ + T++
Sbjct: 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVLL E +L
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 289
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 28 EMMQIRSEIVTLGQIRHR-NILPLLAHLARPGCHLLV-YEFMKNGSLQDIL--------- 76
E + SE+ L I H N++ LL +PG L+V EF K G+L L
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 77 -NDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGL 127
D+ + L+ L Y +A G+E+L +H+ L +LL +I +FGL
Sbjct: 133 YKDLYKDFLTLEHLIXYSFQ--VAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGL 190
Query: 128 AKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
A+ + ++ D ++APE T D++SFGVLL E SL
Sbjct: 191 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 242
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL------------NDVSRGRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L N QL
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 91 RYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL +H+ L VL+ D +I++FGLA+ T++
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVLL E +L
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 15/163 (9%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
+++ ++E+ L + RH NIL + + +P +V ++ + SL L+ S + ++
Sbjct: 62 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-ASETKFEM 119
Query: 87 DWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHI 138
L R A G++YLH +H+ L + L D +I +FGLA
Sbjct: 120 KKL--IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177
Query: 139 TTSDVVGTAGYIAPEY---QQTLSITYMCDIYSFGVLLAEEMS 178
+ G+ ++APE Q + ++ D+Y+FG++L E M+
Sbjct: 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 16/181 (8%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 25 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQY 81
Query: 62 LVYEFMKNGSLQDILN--------DVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVL 113
L E+ G L D + D R QL +A + GI G+ + + +L
Sbjct: 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI--GITHRDIKPENLL 137
Query: 114 LDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGVL 172
LD +IS+FGLA VF + + + GT Y+APE + D++S G++
Sbjct: 138 LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 197
Query: 173 L 173
L
Sbjct: 198 L 198
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 22 SKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSR 81
++L + ++ E+ + + H NI+ L + LV E+ G + D L V+
Sbjct: 51 TQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAH 108
Query: 82 GR-RQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFP 132
GR ++ + A++R I S ++Y H +H+ L +LLD DM +I++FG + F
Sbjct: 109 GRMKEKEARAKFRQ---IVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFT 165
Query: 133 EAHTHITTSDVVGTAGYIAPE-YQQTLSITYMCDIYSFGVLL 173
+ T G+ Y APE +Q D++S GV+L
Sbjct: 166 VGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILN-----------DVSR-GRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L D++R Q+ +
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL + + VL+ + +I++FGLA+ + T++
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVL+ E +L
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILN-----------DVSR-GRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L D++R Q+ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL + + VL+ + +I++FGLA+ T++
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVL+ E +L
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILN-----------DVSR-GRRQLDWLA 90
+H+NI+ LL + G ++ E+ G+L++ L D++R Q+ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL + + VL+ + +I++FGLA+ T++
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVL+ E +L
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 23 KLLTEEMMQIR---SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV 79
K L E+ M++ E + +I+H N++ LL +V E+M G+L D L +
Sbjct: 63 KTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLREC 122
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVF 131
+ R ++ + I+S +EYL +H+ L L+ + ++++FGL+++
Sbjct: 123 N--REEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLM 180
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T+ + + APE + + D+++FGVLL E
Sbjct: 181 -TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWE 223
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 28 EMMQIRSEIVTLGQIRHR-NILPLLAHLARPGCHLLV-YEFMKNGSLQDIL--------- 76
E + SE+ L I H N++ LL +PG L+V EF K G+L L
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 77 -NDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGL 127
D+ + L+ L Y +A G+E+L +H+ L +LL +I +FGL
Sbjct: 133 YKDLYKDFLTLEHLICYSF--QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGL 190
Query: 128 AKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
A+ + ++ D ++APE T D++SFGVLL E SL
Sbjct: 191 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 242
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 18/182 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 24 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 80
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 81 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 172 LL 173
+L
Sbjct: 196 VL 197
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 17/151 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRR--QLDWLARY 92
EI L ++ H NI+ L+ + C LV+EFM+ L+ +L++ G + Q+ + Y
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIK-IYLY 126
Query: 93 RTVRGIASGLEYLHMHQAL----VLLDHDMEARISEFGLAKVFP---EAHTHITTSDVVG 145
+ +RG+A ++ +H+ L +L++ D ++++FGLA+ F ++TH +VV
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH----EVV- 181
Query: 146 TAGYIAPEY-QQTLSITYMCDIYSFGVLLAE 175
T Y AP+ + + DI+S G + AE
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAE 212
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ ++ V E+M GSL D L + +L L
Sbjct: 56 EAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVD--M 112
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E + +
Sbjct: 113 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFP 171
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 172 IKWTAPEAALYGRFTIKSDVWSFGILLTE 200
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 17/151 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRR--QLDWLARY 92
EI L ++ H NI+ L+ + C LV+EFM+ L+ +L++ G + Q+ + Y
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIK-IYLY 126
Query: 93 RTVRGIASGLEYLHMHQAL----VLLDHDMEARISEFGLAKVFP---EAHTHITTSDVVG 145
+ +RG+A ++ +H+ L +L++ D ++++FGLA+ F ++TH +VV
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH----EVV- 181
Query: 146 TAGYIAPEY-QQTLSITYMCDIYSFGVLLAE 175
T Y AP+ + + DI+S G + AE
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAE 212
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 18/182 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 24 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 80
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 81 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 172 LL 173
+L
Sbjct: 196 VL 197
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ ++ V E+M GSL D L + +L L
Sbjct: 60 EAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA 118
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E + +
Sbjct: 119 Q--IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFP 175
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 176 IKWTAPEAALYGRFTIKSDVWSFGILLTE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 18/182 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 25 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 81
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 82 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 172 LL 173
+L
Sbjct: 197 VL 198
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 18/182 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 23 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 79
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 80 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 134
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 135 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 194
Query: 172 LL 173
+L
Sbjct: 195 VL 196
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 18/182 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 24 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 80
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 81 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 172 LL 173
+L
Sbjct: 196 VL 197
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 98 IASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGY 149
I GLE LH + + +LLD RIS+ GLA PE T VGT GY
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGY 351
Query: 150 IAPEYQQTLSITYMCDIYSFGVLLAE 175
+APE + T+ D ++ G LL E
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYE 377
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 16/182 (8%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 24 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 80
Query: 62 LVYEFMKNGSLQDILN--------DVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVL 113
L E+ G L D + D R QL +A + GI G+ + + +L
Sbjct: 81 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI--GITHRDIKPENLL 136
Query: 114 LDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGVL 172
LD +IS+FGLA VF + + + GT Y+APE + D++S G++
Sbjct: 137 LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 196
Query: 173 LA 174
L
Sbjct: 197 LT 198
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 18/183 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 24 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 80
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 81 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 172 LLA 174
+L
Sbjct: 196 VLT 198
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 18/183 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 25 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 81
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 82 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 172 LLA 174
+L
Sbjct: 197 VLT 199
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 16/182 (8%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 24 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 80
Query: 62 LVYEFMKNGSLQDILN--------DVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVL 113
L E+ G L D + D R QL +A + GI G+ + + +L
Sbjct: 81 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHGI--GITHRDIKPENLL 136
Query: 114 LDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGVL 172
LD +IS+FGLA VF + + + GT Y+APE + D++S G++
Sbjct: 137 LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 196
Query: 173 LA 174
L
Sbjct: 197 LT 198
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 26/181 (14%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+ I + M +V+ ++++E+ Q++H +IL L +
Sbjct: 39 VAIKMIDKKAMYKAGMVQ-----------RVQNEVKIHCQLKHPSILELYNYFEDSNYVY 87
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VL 113
LV E NG + L + R + + AR+ + I +G+ YLH H L +L
Sbjct: 88 LVLEMCHNGEMNRYLKN--RVKPFSENEARH-FMHQIITGMLYLHSHGILHRDLTLSNLL 144
Query: 114 LDHDMEARISEFGLAKVFPEAH-THITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
L +M +I++FGLA H H T + GT YI+PE + D++S G +
Sbjct: 145 LTRNMNIKIADFGLATQLKMPHEKHYT---LCGTPNYISPEIATRSAHGLESDVWSLGCM 201
Query: 173 L 173
Sbjct: 202 F 202
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 28 EMMQIRSEIVTLGQIRHR-NILPLLAHLARPGCHLLV-YEFMKNGSLQDIL----NDVSR 81
E + SE+ L I H N++ LL +PG L+V EF K G+L L N+
Sbjct: 74 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 133
Query: 82 GRRQLDWLARYRTVR-------GIASGLEYLHMHQAL--------VLLDHDMEARISEFG 126
+ D + T+ +A G+E+L + + +LL +I +FG
Sbjct: 134 YKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 193
Query: 127 LAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
LA+ + + D ++APE T D++SFGVLL E SL
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 31/177 (17%)
Query: 14 ATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQ 73
A +++ S T + E+ L Q+ H NI+ L + LV E + G L
Sbjct: 50 AIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF 109
Query: 74 D--ILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMH---------QALVLLDHDMEA-- 120
D IL R++ + ++ + SG YLH H + L+L +A
Sbjct: 110 DEIIL------RQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALI 163
Query: 121 RISEFGLAKVFPEAHTHI--TTSDVVGTAGYIAPEYQQTLSITY--MCDIYSFGVLL 173
+I +FGL+ AH + + +GTA YIAPE L Y CD++S GV+L
Sbjct: 164 KIVDFGLS-----AHFEVGGKMKERLGTAYYIAPE---VLRKKYDEKCDVWSCGVIL 212
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 98 IASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGY 149
I GLE LH + + +LLD RIS+ GLA PE T VGT GY
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGY 351
Query: 150 IAPEYQQTLSITYMCDIYSFGVLLAE 175
+APE + T+ D ++ G LL E
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYE 377
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 31/177 (17%)
Query: 14 ATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQ 73
A +++ S T + E+ L Q+ H NI+ L + LV E + G L
Sbjct: 33 AIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF 92
Query: 74 D--ILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMH---------QALVLLDHDMEA-- 120
D IL R++ + ++ + SG YLH H + L+L +A
Sbjct: 93 DEIIL------RQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALI 146
Query: 121 RISEFGLAKVFPEAHTHI--TTSDVVGTAGYIAPEYQQTLSITY--MCDIYSFGVLL 173
+I +FGL+ AH + + +GTA YIAPE L Y CD++S GV+L
Sbjct: 147 KIVDFGLS-----AHFEVGGKMKERLGTAYYIAPE---VLRKKYDEKCDVWSCGVIL 195
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 18/182 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 24 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQY 80
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 81 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 172 LL 173
+L
Sbjct: 196 VL 197
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 18/182 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 24 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 80
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 81 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 172 LL 173
+L
Sbjct: 196 VL 197
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 18/183 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 24 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 80
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 81 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 172 LLA 174
+L
Sbjct: 196 VLT 198
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + +IRH ++ L A ++ ++ V E+M GSL D L +L L
Sbjct: 63 EAQVMKKIRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVD--M 119
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E + +
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFP 178
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 18/182 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 25 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 81
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 82 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 172 LL 173
+L
Sbjct: 197 VL 198
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 18/182 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 25 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 81
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 82 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 172 LL 173
+L
Sbjct: 197 VL 198
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 18/182 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 25 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 81
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 82 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 172 LL 173
+L
Sbjct: 197 VL 198
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L Q+ H N++ A +V E G L ++ + +R + ++
Sbjct: 82 EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY 141
Query: 95 VRGIASGLEYLH----MHQ----ALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ S LE++H MH+ A V + ++ + GL + F T +VGT
Sbjct: 142 FVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGT 199
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
Y++PE + DI+S G LL E +L
Sbjct: 200 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL 232
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 29 MMQIRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVYEFMKNGSLQDILNDVSRGRRQL 86
+ ++ EI L + H NI+ G + L+ EF+ +GSL++ L + + ++
Sbjct: 67 IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKI 123
Query: 87 DWLARYRTVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHI 138
+ + + I G++YL ++H+ L VL++ + + +I +FGL K
Sbjct: 124 NLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXX 183
Query: 139 TTSDVVGTAGY-IAPEYQQTLSITYMCDIYSFGVLLAE 175
T D + + APE D++SFGV L E
Sbjct: 184 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHE 221
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 18/162 (11%)
Query: 22 SKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSR 81
++L + + ++ E+ + + H NI+ L + LV E+ G + D L V+
Sbjct: 50 TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAH 107
Query: 82 GR-RQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFP 132
GR ++ + A++R I S ++Y H +H+ L +LLD DM +I++FG + F
Sbjct: 108 GRMKEKEARAKFRQ---IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
Query: 133 EAHTHITTSDVVGTAGYIAPE-YQQTLSITYMCDIYSFGVLL 173
+ G Y APE +Q D++S GV+L
Sbjct: 165 FGN---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 29 MMQIRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVYEFMKNGSLQDILNDVSRGRRQL 86
+ ++ EI L + H NI+ G + L+ EF+ +GSL++ L + + ++
Sbjct: 55 IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKI 111
Query: 87 DWLARYRTVRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHI 138
+ + + I G++YL ++H+ L VL++ + + +I +FGL K
Sbjct: 112 NLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXX 171
Query: 139 TTSDVVGTAGY-IAPEYQQTLSITYMCDIYSFGVLLAE 175
T D + + APE D++SFGV L E
Sbjct: 172 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHE 209
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 24/169 (14%)
Query: 27 EEMMQIRSEIVTLGQI-RHRNILPLLAHLAR---PGCH---LLVYEFMKNGSLQDILNDV 79
+E +I+ EI L + HRNI + PG LV EF GS+ D++ +
Sbjct: 62 DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT 121
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVF 131
+ +W+A R I GL +LH H+ + VLL + E ++ +FG++
Sbjct: 122 KGNTLKEEWIA--YICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179
Query: 132 PEAHTHITTSDVVGTAGYIAPEY-----QQTLSITYMCDIYSFGVLLAE 175
T +GT ++APE + + D++S G+ E
Sbjct: 180 DRTVGRRNT--FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE 226
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 24/174 (13%)
Query: 28 EMMQIRSEIVTLGQIRHR-NILPLLAHLARPGCHLLV-YEFMKNGSLQDIL--------- 76
E + SE+ L I H N++ LL +PG L+V EF K G+L L
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
Query: 77 ---NDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL----VLLDHDMEARISEF 125
D+ + L+ L Y +A G+E+L +H+ L +LL +I +F
Sbjct: 135 YKPEDLYKDFLTLEHLIXYSFQ--VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDF 192
Query: 126 GLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
GLA+ + + D ++APE T D++SFGVLL E SL
Sbjct: 193 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 18/182 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 25 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 81
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 82 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 172 LL 173
+L
Sbjct: 197 VL 198
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 18/182 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 25 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQY 81
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 82 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 172 LL 173
+L
Sbjct: 197 VL 198
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 16 ALVEADSKLLTEEMMQIR---------SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEF 66
A V + KL+ + M +R +E+V + +H N++ + +V EF
Sbjct: 43 ATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 102
Query: 67 MKNGSLQDILNDVSRGRRQLDW--LARYRTVRGI-ASGLEYLHMHQALVLLDHDMEARIS 123
++ G+L DI+ Q+ LA + + + A G+ + + +LL HD ++S
Sbjct: 103 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS 162
Query: 124 EFGL-AKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+FG A+V E +VGT ++APE L DI+S G+++ E
Sbjct: 163 DFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 212
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 16 ALVEADSKLLTEEMMQIR---------SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEF 66
A V + KL+ + M +R +E+V + +H N++ + +V EF
Sbjct: 39 ATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98
Query: 67 MKNGSLQDILNDVSRGRRQLDW--LARYRTVRGI-ASGLEYLHMHQALVLLDHDMEARIS 123
++ G+L DI+ Q+ LA + + + A G+ + + +LL HD ++S
Sbjct: 99 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS 158
Query: 124 EFGL-AKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+FG A+V E +VGT ++APE L DI+S G+++ E
Sbjct: 159 DFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 208
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
++++EI + Q+ H N++ L +LV E++ G L D + D S +LD +
Sbjct: 132 EVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL 191
Query: 91 RYRTVRGIASGLEYLHMHQALVL-LDHDMEA-----------RISEFGLAKVF-PEAHTH 137
++ I G+ HMHQ +L LD E +I +FGLA+ + P
Sbjct: 192 ---FMKQICEGIR--HMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK 246
Query: 138 ITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
+ GT ++APE +++ D++S GV+
Sbjct: 247 VN----FGTPEFLAPEVVNYDFVSFPTDMWSVGVI 277
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 18/182 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 24 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQY 80
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 81 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 172 LL 173
+L
Sbjct: 196 VL 197
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 41/185 (22%)
Query: 27 EEMMQIRSEIVTLGQIRH-------------RNILPLLAHLARPGCHLLVYEFMKNGSLQ 73
E++ I SE++ L + H RN + + + + + E+ +NG+L
Sbjct: 44 EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLY 103
Query: 74 DILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEF 125
D+++ + +++ ++ +R R I L Y+H +H+ L + +D +I +F
Sbjct: 104 DLIHSENLNQQRDEY---WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDF 160
Query: 126 GLAK--------------VFPEAHTHITTSDVVGTAGYIAPEY-QQTLSITYMCDIYSFG 170
GLAK P + ++T++ +GTA Y+A E T D+YS G
Sbjct: 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSA--IGTAMYVATEVLDGTGHYNEKIDMYSLG 218
Query: 171 VLLAE 175
++ E
Sbjct: 219 IIFFE 223
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 18/182 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 24 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 80
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 81 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 172 LL 173
+L
Sbjct: 196 VL 197
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 16 ALVEADSKLLTEEMMQIR---------SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEF 66
A V + KL+ + M +R +E+V + +H N++ + +V EF
Sbjct: 48 ATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 107
Query: 67 MKNGSLQDILNDVSRGRRQLDW--LARYRTVRGI-ASGLEYLHMHQALVLLDHDMEARIS 123
++ G+L DI+ Q+ LA + + + A G+ + + +LL HD ++S
Sbjct: 108 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS 167
Query: 124 EFGL-AKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+FG A+V E +VGT ++APE L DI+S G+++ E
Sbjct: 168 DFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 217
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 16 ALVEADSKLLTEEMMQIR---------SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEF 66
A V + KL+ + M +R +E+V + +H N++ + +V EF
Sbjct: 50 ATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 109
Query: 67 MKNGSLQDILNDVSRGRRQLDW--LARYRTVRGI-ASGLEYLHMHQALVLLDHDMEARIS 123
++ G+L DI+ Q+ LA + + + A G+ + + +LL HD ++S
Sbjct: 110 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS 169
Query: 124 EFGL-AKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+FG A+V E +VGT ++APE L DI+S G+++ E
Sbjct: 170 DFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 219
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 18/182 (9%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+A+ ++ + +A A+ D K + I+ EI + H N++ H
Sbjct: 24 LAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 80
Query: 62 LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----V 112
L E+ G L D I D+ G + D R + +G+ YLH H+ + +
Sbjct: 81 LFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI-TYMCDIYSFGV 171
LLD +IS+FGLA VF + + + GT Y+APE + D++S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 172 LL 173
+L
Sbjct: 196 VL 197
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 24/164 (14%)
Query: 23 KLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRG 82
K L + I +EI L +I+H NI+ L P LV + + G L D + V +G
Sbjct: 58 KALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRI--VEKG 115
Query: 83 ---RRQLDWLARYRTVRGIASGLEYLH----MH-----QALVLLDHDMEAR--ISEFGLA 128
+ L +R + + YLH +H + L+ D E++ IS+FGL+
Sbjct: 116 FYTEKDASTL-----IRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLS 170
Query: 129 KVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
K+ E + ++ GT GY+APE + D +S GV+
Sbjct: 171 KM--EGKGDVMST-ACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ ++++ E+M GSL D L +L L
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVD--M 119
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E + +
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFP 178
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ ++ V E+M GSL D L + +L L
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVD--M 285
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E + +
Sbjct: 286 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFP 344
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTE 373
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 31/198 (15%)
Query: 3 AIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLL 62
A+ K+ + +TA + L++E ++I S LGQ H NI+ LL G L+
Sbjct: 75 AVLKVAVKMLKSTAHADEKEALMSE--LKIMSH---LGQ--HENIVNLLGACTHGGPVLV 127
Query: 63 VYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRG-------------IASGLEYLHMHQ 109
+ E+ G D+LN + R R L+ + +A G+ +L
Sbjct: 128 ITEYCCYG---DLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN 184
Query: 110 AL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSIT 161
+ VLL + A+I +FGLA+ +I + ++APE T
Sbjct: 185 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT 244
Query: 162 YMCDIYSFGVLLAEEMSL 179
D++S+G+LL E SL
Sbjct: 245 VQSDVWSYGILLWEIFSL 262
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ ++ V E+M GSL D L + +L L
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVD--M 285
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E + +
Sbjct: 286 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFP 344
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTE 373
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 17/153 (11%)
Query: 30 MQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWL 89
M++ EI L +RH +I+ L + P ++V E+ G L D + V + R D
Sbjct: 54 MRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYI--VEKKRMTEDEG 110
Query: 90 ARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTS 141
R+ + I +EY H H+ + +LLD ++ +I++FGL+ + + + T+
Sbjct: 111 RRF--FQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC 168
Query: 142 DVVGTAGYIAPEY-QQTLSITYMCDIYSFGVLL 173
G+ Y APE L D++S G++L
Sbjct: 169 ---GSPNYAAPEVINGKLYAGPEVDVWSCGIVL 198
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
+++ ++E+ L + RH NIL + + P +V ++ + SL L+ S + ++
Sbjct: 62 QQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLH-ASETKFEM 119
Query: 87 DWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHI 138
L R A G++YLH +H+ L + L D +I +FGLA
Sbjct: 120 KKL--IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177
Query: 139 TTSDVVGTAGYIAPEY---QQTLSITYMCDIYSFGVLLAEEMS 178
+ G+ ++APE Q + ++ D+Y+FG++L E M+
Sbjct: 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 36/178 (20%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL-----LVYEFMKNGSLQDILNDVSR 81
++ Q E+ +L ++H NIL + R G + L+ F + GSL D L
Sbjct: 60 KQSWQNEYEVYSLPGMKHENILQFIGAEKR-GTSVDVDLWLITAFHEKGSLSDFLK---- 114
Query: 82 GRRQLDWLARYRTVRGIASGLEYLH------------------MHQALVLLDHDMEARIS 123
+ W +A GL YLH + VLL +++ A I+
Sbjct: 115 -ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173
Query: 124 EFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYM------CDIYSFGVLLAE 175
+FGLA F + T VGT Y+APE + +I + D+Y+ G++L E
Sbjct: 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEG-AINFQRDAFLRIDMYAMGLVLWE 230
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 16 ALVEADSKLLTEEMMQIR---------SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEF 66
A V + KL+ + M +R +E+V + +H N++ + +V EF
Sbjct: 93 ATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152
Query: 67 MKNGSLQDILNDVSRGRRQLDW--LARYRTVRGI-ASGLEYLHMHQALVLLDHDMEARIS 123
++ G+L DI+ Q+ LA + + + A G+ + + +LL HD ++S
Sbjct: 153 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS 212
Query: 124 EFGL-AKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+FG A+V E +VGT ++APE L DI+S G+++ E
Sbjct: 213 DFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 262
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ ++ V E+M GSL D L + +L L
Sbjct: 60 EAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA 118
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E +
Sbjct: 119 Q--IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEWTARQGAKFP 175
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 176 IKWTAPEAALYGRFTIKSDVWSFGILLTE 204
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ ++ V E+M GSL D L +L L
Sbjct: 54 EAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVD--M 110
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E + +
Sbjct: 111 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFP 169
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 170 IKWTAPEAALYGRFTIKSDVWSFGILLTE 198
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ ++ V E+M GSL D L + +L L
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIYI-VGEYMSKGSLLDFLKGETGKYLRLPQLVD--M 285
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E + +
Sbjct: 286 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFP 344
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTE 373
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 98 IASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGY 149
I SGLE+LH + VLLD D RIS+ GLA T T GT G+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGF 355
Query: 150 IAPEYQQTLSITYMCDIYSFGVLLAE 175
+APE + D ++ GV L E
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYE 381
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 98 IASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGY 149
I SGLE+LH + VLLD D RIS+ GLA T T GT G+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGF 355
Query: 150 IAPEYQQTLSITYMCDIYSFGVLLAE 175
+APE + D ++ GV L E
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYE 381
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 98 IASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGY 149
I SGLE+LH + VLLD D RIS+ GLA T T GT G+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGF 355
Query: 150 IAPEYQQTLSITYMCDIYSFGVLLAE 175
+APE + D ++ GV L E
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYE 381
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ ++ V E+M GSL D L +L L
Sbjct: 52 EAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVD--M 108
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E + +
Sbjct: 109 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFP 167
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 168 IKWTAPEAALYGRFTIKSDVWSFGILLTE 196
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 98 IASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGY 149
I SGLE+LH + VLLD D RIS+ GLA T T GT G+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGF 355
Query: 150 IAPEYQQTLSITYMCDIYSFGVLLAE 175
+APE + D ++ GV L E
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYE 381
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 28 EMMQIRSEIVTLGQIRHR-NILPLLAHLARPGCHLLV-YEFMKNGSLQDIL--------- 76
E + SE+ L I H N++ LL +PG L+V EF K G+L L
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 77 -----NDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARIS 123
D+ + L+ L Y +A G+E+L + + +LL +I
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 124 EFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+FGLA+ + ++ D ++APE T D++SFGVLL E SL
Sbjct: 191 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 75/188 (39%), Gaps = 37/188 (19%)
Query: 24 LLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL-----LVYEFMKNGSLQDILND 78
L ++ Q EI + ++H N+L +A R G +L L+ F GSL D L
Sbjct: 48 LQDKQSWQSEREIFSTPGMKHENLLQFIAAEKR-GSNLEVELWLITAFHDKGSLTDYLKG 106
Query: 79 VSRGRRQLDWLARYRTVRGIASGLEYLH-------------------MHQALVLLDHDME 119
+ W ++ GL YLH VLL D+
Sbjct: 107 -----NIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLT 161
Query: 120 ARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYM------CDIYSFGVLL 173
A +++FGLA F T VGT Y+APE + +I + D+Y+ G++L
Sbjct: 162 AVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEG-AINFQRDAFLRIDMYAMGLVL 220
Query: 174 AEEMSLVK 181
E +S K
Sbjct: 221 WELVSRCK 228
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 16 ALVEADSKLLTEEMMQIR---------SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEF 66
A V + KL+ + M +R +E+V + +H N++ + +V EF
Sbjct: 170 ATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229
Query: 67 MKNGSLQDILNDVSRGRRQLDW--LARYRTVRGI-ASGLEYLHMHQALVLLDHDMEARIS 123
++ G+L DI+ Q+ LA + + + A G+ + + +LL HD ++S
Sbjct: 230 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS 289
Query: 124 EFGL-AKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+FG A+V E +VGT ++APE L DI+S G+++ E
Sbjct: 290 DFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 339
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ ++ V E+M GSL D L +L L
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVD--M 119
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E + +
Sbjct: 120 AAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFP 178
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 28 EMMQIRSEIVTLGQIRHR-NILPLLAHLARPGCHLLV-YEFMKNGSLQDIL--------- 76
E + SE+ L I H N++ LL +PG L+V EF K G+L L
Sbjct: 110 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 169
Query: 77 -----NDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARIS 123
D+ + L+ L Y +A G+E+L + + +LL +I
Sbjct: 170 YKVAPEDLYKDFLTLEHLICYSFQ--VAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 227
Query: 124 EFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+FGLA+ + ++ D ++APE T D++SFGVLL E SL
Sbjct: 228 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 283
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 17/157 (10%)
Query: 29 MMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL-QDILNDVSRGRRQLD 87
M QI +EI L + H NI+ + +V E + G L + I++ +RG+ +
Sbjct: 64 MEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSE 123
Query: 88 WLARYRTVRGIASGLEYLH----MHQALV---LLDHDMEA----RISEFGLAKVFPEAHT 136
++ + + L Y H +H+ L +L D +I +FGLA++F ++
Sbjct: 124 GYVA-ELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF-KSDE 181
Query: 137 HITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
H +++ GTA Y+APE + +T+ CDI+S GV++
Sbjct: 182 H--STNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVM 215
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 28 EMMQIRSEIVTLGQIRHR-NILPLLAHLARPGCHLLV-YEFMKNGSLQDIL--------- 76
E + SE+ L I H N++ LL +PG L+V EF K G+L L
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
Query: 77 -----NDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARIS 123
D+ + L+ L Y +A G+E+L + + +LL +I
Sbjct: 135 YKEAPEDLYKDFLTLEHLICYSFQ--VAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 192
Query: 124 EFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+FGLA+ + ++ D ++APE T D++SFGVLL E SL
Sbjct: 193 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 248
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILN-----------DVSR-GRRQLDWLA 90
+H+NI+ LL + G ++ + G+L++ L D++R Q+ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL + + VL+ + +I++FGLA+ + T++
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVL+ E +L
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ ++ V E+M GSL D L +L L
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVD--M 119
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E + +
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFP 178
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ ++ V E+M GSL D L +L L
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIYI-VCEYMSKGSLLDFLKGEMGKYLRLPQLVD--M 119
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E + +
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFP 178
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 28 EMMQIRSEIVTLGQIRHR-NILPLLAHLARPGCHLLVY-EFMKNGSLQDIL--------- 76
E + SE+ L I H N++ LL +PG L+V EF K G+L L
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 77 -----NDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARIS 123
D+ + L+ L Y +A G+E+L + + +LL +I
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 181
Query: 124 EFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+FGLA+ + ++ D ++APE T D++SFGVLL E SL
Sbjct: 182 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 28 EMMQIRSEIVTLGQIRHR-NILPLLAHLARPGCHLLVY-EFMKNGSLQDIL--------- 76
E + SE+ L I H N++ LL +PG L+V EF K G+L L
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 77 -----NDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARIS 123
D+ + L+ L Y +A G+E+L + + +LL +I
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQ--VAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 181
Query: 124 EFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+FGLA+ + ++ D ++APE T D++SFGVLL E SL
Sbjct: 182 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 26/176 (14%)
Query: 28 EMMQIRSEIVTLGQIRHR-NILPLLAHLARPGCHLLV-YEFMKNGSLQDIL--------- 76
E + SE+ L I H N++ LL +PG L+V EF K G+L L
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 77 -----NDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARIS 123
D+ + L+ L Y +A G+E+L + + +LL +I
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 124 EFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+FGLA+ + + D ++APE T D++SFGVLL E SL
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 33 RSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY 92
+ EI L Q I + ++ E++ GS D+L G + ++A
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKP---GPLEETYIAT- 120
Query: 93 RTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVV 144
+R I GL+YLH + A VLL + ++++FG+A + T I + V
Sbjct: 121 -ILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNXFV 177
Query: 145 GTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
GT ++APE + + + DI+S G+ E
Sbjct: 178 GTPFWMAPEVIKQSAYDFKADIWSLGITAIE 208
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VL 113
LV E++ +G L+D L R R +LD I G+EYL +H+ L +L
Sbjct: 91 LVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 147
Query: 114 LDHDMEARISEFGLAKVFP-EAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ + +I++FGLAK+ P + ++ + APE + D++SFGV+
Sbjct: 148 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 207
Query: 173 LAE 175
L E
Sbjct: 208 LYE 210
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VL 113
LV E++ +G L+D L R R +LD I G+EYL +H+ L +L
Sbjct: 90 LVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 146
Query: 114 LDHDMEARISEFGLAKVFP-EAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ + +I++FGLAK+ P + ++ + APE + D++SFGV+
Sbjct: 147 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 206
Query: 173 LAE 175
L E
Sbjct: 207 LYE 209
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILN-----------DVSR-GRRQLDWLA 90
+H+NI+ LL + G ++ + G+L++ L D++R Q+ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+A G+EYL + + VL+ + +I++FGLA+ + T++
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
++APE T+ D++SFGVL+ E +L
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 22/167 (13%)
Query: 22 SKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSR 81
S++ ++E + R E+ L ++H NI+ G +V ++ + G L +N +
Sbjct: 60 SRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRIN-AQK 118
Query: 82 G-----RRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLA 128
G + LDW + I L+++H + L + L D ++ +FG+A
Sbjct: 119 GVLFQEDQILDWFVQ------ICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIA 172
Query: 129 KVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+V T +GT Y++PE + DI++ G +L E
Sbjct: 173 RVL--NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYE 217
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VL 113
LV E++ +G L+D L R R +LD I G+EYL +H+ L +L
Sbjct: 103 LVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 159
Query: 114 LDHDMEARISEFGLAKVFP-EAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ + +I++FGLAK+ P + ++ + APE + D++SFGV+
Sbjct: 160 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 219
Query: 173 LAE 175
L E
Sbjct: 220 LYE 222
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ ++ V E+M GSL D L + +L L
Sbjct: 312 EAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVD--M 368
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E + +
Sbjct: 369 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFP 427
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 428 IKWTAPEAALYGRFTIKSDVWSFGILLTE 456
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VL 113
LV E++ +G L+D L R R +LD I G+EYL +H+ L +L
Sbjct: 87 LVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 143
Query: 114 LDHDMEARISEFGLAKVFP-EAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ + +I++FGLAK+ P + + + APE + D++SFGV+
Sbjct: 144 VESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 203
Query: 173 LAE 175
L E
Sbjct: 204 LYE 206
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 25/193 (12%)
Query: 3 AIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLL 62
A+ K+ + +TA + L++E ++I S LGQ H NI+ LL G L+
Sbjct: 75 AVLKVAVKMLKSTAHADEKEALMSE--LKIMSH---LGQ--HENIVNLLGACTHGGPVLV 127
Query: 63 VYEFMKNGSLQDILN-------DVSRGRR-QLDWLARYRTVRGIASGLEYLHMHQAL--- 111
+ E+ G L + L D GR +L L + + +A G+ +L +
Sbjct: 128 ITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ--VAQGMAFLASKNCIHRD 185
Query: 112 -----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDI 166
VLL + A+I +FGLA+ +I + ++APE T D+
Sbjct: 186 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 245
Query: 167 YSFGVLLAEEMSL 179
+S+G+LL E SL
Sbjct: 246 WSYGILLWEIFSL 258
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 25/193 (12%)
Query: 3 AIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLL 62
A+ K+ + +TA + L++E ++I S LGQ H NI+ LL G L+
Sbjct: 67 AVLKVAVKMLKSTAHADEKEALMSE--LKIMSH---LGQ--HENIVNLLGACTHGGPVLV 119
Query: 63 VYEFMKNGSLQDILN-------DVSRGRR-QLDWLARYRTVRGIASGLEYLHMHQAL--- 111
+ E+ G L + L D GR +L L + + +A G+ +L +
Sbjct: 120 ITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ--VAQGMAFLASKNCIHRD 177
Query: 112 -----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDI 166
VLL + A+I +FGLA+ +I + ++APE T D+
Sbjct: 178 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 237
Query: 167 YSFGVLLAEEMSL 179
+S+G+LL E SL
Sbjct: 238 WSYGILLWEIFSL 250
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 22 SKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSR 81
++L + + ++ E+ + + H NI+ L + LV E+ G + D L V+
Sbjct: 43 TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAH 100
Query: 82 G-RRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFP 132
G ++ + A++R I S ++Y H +H+ L +LLD DM +I++FG + F
Sbjct: 101 GWMKEKEARAKFRQ---IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 157
Query: 133 EAHTHITTSDVVGTAGYIAPE-YQQTLSITYMCDIYSFGVLL 173
+ T G+ Y APE +Q D++S GV+L
Sbjct: 158 FGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 196
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-----RQLDWL 89
E + +++H ++ L A ++ ++ V E+M GSL D L D GR +D
Sbjct: 54 EAQIMKKLKHDKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKD-GEGRALKLPNLVDMA 111
Query: 90 ARYRTVRGIASGLEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTA 147
A+ + Y+H + A +L+ + + +I++FGLA++ E +
Sbjct: 112 AQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLI-EDNEXTARQGAKFPI 170
Query: 148 GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTE 198
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ ++++ E+M GSL D L +L L
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVD--M 119
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E +
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFP 178
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 26/176 (14%)
Query: 28 EMMQIRSEIVTLGQIRHR-NILPLLAHLARPGCHLLV-YEFMKNGSLQDIL--------- 76
E + SE+ L I H N++ LL +PG L+V EF K G+L L
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 123
Query: 77 -----NDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARIS 123
D+ + L+ L Y +A G+E+L + + +LL +I
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 181
Query: 124 EFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+FGLA+ + + D ++APE T D++SFGVLL E SL
Sbjct: 182 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQ--------ALVL 113
++ E++ GS D+L Q+ + +R I GL+YLH + A VL
Sbjct: 97 IIMEYLGGGSALDLLEPGPLDETQIATI-----LREILKGLDYLHSEKKIHRDIKAANVL 151
Query: 114 LDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
L E ++++FG+A + T I + VGT ++APE + + DI+S G+
Sbjct: 152 LSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 209
Query: 174 AE 175
E
Sbjct: 210 IE 211
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 26/176 (14%)
Query: 28 EMMQIRSEIVTLGQIRHR-NILPLLAHLARPGCHLLVY-EFMKNGSLQDIL--------- 76
E + SE+ L I H N++ LL +PG L+V EF K G+L L
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 77 -----NDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARIS 123
D+ + L+ L Y +A G+E+L + + +LL +I
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQ--VAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 181
Query: 124 EFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+FGLA+ + + D ++APE T D++SFGVLL E SL
Sbjct: 182 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 28/153 (18%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
+E + ++H ++ L A + + +++ EFM GSL D L ++ L L +
Sbjct: 226 AEANVMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFS 284
Query: 94 TVRGIASGL------EYLH--MHQALVLLDHDMEARISEFGLAKV---FPEAHTHITTSD 142
IA G+ Y+H + A +L+ + +I++FGLA+V FP
Sbjct: 285 A--QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFP---------- 332
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE S T D++SFG+LL E
Sbjct: 333 ----IKWTAPEAINFGSFTIKSDVWSFGILLME 361
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQ--------ALVL 113
++ E++ GS D+L Q+ + +R I GL+YLH + A VL
Sbjct: 82 IIMEYLGGGSALDLLEPGPLDETQIATI-----LREILKGLDYLHSEKKIHRDIKAANVL 136
Query: 114 LDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
L E ++++FG+A + T I + VGT ++APE + + DI+S G+
Sbjct: 137 LSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 194
Query: 174 AE 175
E
Sbjct: 195 IE 196
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 26/176 (14%)
Query: 28 EMMQIRSEIVTLGQIRHR-NILPLLAHLARPGCHLLV-YEFMKNGSLQDIL--------- 76
E + SE+ L I H N++ LL +PG L+V EF K G+L L
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 77 -----NDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARIS 123
D+ + L+ L Y +A G+E+L + + +LL +I
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 124 EFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+FGLA+ + + D ++APE T D++SFGVLL E SL
Sbjct: 191 DFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQ--------ALVL 113
++ E++ GS D+L Q+ + +R I GL+YLH + A VL
Sbjct: 82 IIMEYLGGGSALDLLEPGPLDETQIATI-----LREILKGLDYLHSEKKIHRDIKAANVL 136
Query: 114 LDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
L E ++++FG+A + T I + VGT ++APE + + DI+S G+
Sbjct: 137 LSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 194
Query: 174 AE 175
E
Sbjct: 195 IE 196
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ + V E+M GSL D L + +L L
Sbjct: 53 EAQVMKKLRHEKLVQLYAVVSEEPIXI-VTEYMSKGSLLDFLKGETGKYLRLPQLVD--M 109
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E +
Sbjct: 110 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFP 168
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 169 IKWTAPEAALYGRFTIKSDVWSFGILLTE 197
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQ--------ALVL 113
++ E++ GS D+L Q+ + +R I GL+YLH + A VL
Sbjct: 102 IIMEYLGGGSALDLLEPGPLDETQIATI-----LREILKGLDYLHSEKKIHRDIKAANVL 156
Query: 114 LDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
L E ++++FG+A + T I + VGT ++APE + + DI+S G+
Sbjct: 157 LSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 214
Query: 174 AE 175
E
Sbjct: 215 IE 216
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 90/178 (50%), Gaps = 32/178 (17%)
Query: 23 KLLTEEMMQIRS----EIVTLGQIR-HRNILPLLAHLARPGCHLLVYEFMKNGSLQDILN 77
K++ ++ IRS E+ L Q + HRN+L L+ LV+E M+ GS IL+
Sbjct: 44 KIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS---ILS 100
Query: 78 DVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDME---ARISEFG 126
+ + RR + L V+ +AS L++LH H+ L +L +H + +I +FG
Sbjct: 101 HIHK-RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFG 159
Query: 127 LA---KVFPEAHTHITTSDVV---GTAGYIAPEYQQTLS-----ITYMCDIYSFGVLL 173
L K+ + + I+T +++ G+A Y+APE + S CD++S GV+L
Sbjct: 160 LGSGIKLNGDC-SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 15 TALVEADSKLLTEEMMQ--IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL 72
AL + K+L + MQ I EI L +RH +I+ L + ++V E+ N
Sbjct: 41 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 100
Query: 73 QDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISE 124
I+ R ++ R + I S +EY H H+ + +LLD + +I++
Sbjct: 101 DYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIAD 155
Query: 125 FGLAKVFPEAHTHITTSDVVGTAGYIAPEY-QQTLSITYMCDIYSFGVLL 173
FGL+ + + + T+ G+ Y APE L D++S GV+L
Sbjct: 156 FGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 202
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 26/165 (15%)
Query: 23 KLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL-LVYEFMKNGSLQDILNDVSR 81
K L + + +EI L +I+H NI+ L + G HL L+ + + G L D + V +
Sbjct: 54 KALEGKEGSMENEIAVLHKIKHPNIV-ALDDIYESGGHLYLIMQLVSGGELFDRI--VEK 110
Query: 82 G---RRQLDWLARYRTVRGIASGLEYLH----MHQAL-------VLLDHDMEARISEFGL 127
G R R + + ++YLH +H+ L LD D + IS+FGL
Sbjct: 111 GFYTERDAS-----RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL 165
Query: 128 AKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
+K+ S GT GY+APE + D +S GV+
Sbjct: 166 SKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 15 TALVEADSKLLTEEMMQ--IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL 72
AL + K+L + MQ I EI L +RH +I+ L + ++V E+ N
Sbjct: 32 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 91
Query: 73 QDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISE 124
I+ R ++ R + I S +EY H H+ + +LLD + +I++
Sbjct: 92 DYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIAD 146
Query: 125 FGLAKVFPEAHTHITTSDVVGTAGYIAPEY-QQTLSITYMCDIYSFGVLL 173
FGL+ + + + T+ G+ Y APE L D++S GV+L
Sbjct: 147 FGLSNIMTDGNFLKTSC---GSPNYAAPEVISGKLYAGPEVDVWSCGVIL 193
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 15 TALVEADSKLLTEEMMQ--IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL 72
AL + K+L + MQ I EI L +RH +I+ L + ++V E+ N
Sbjct: 36 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 95
Query: 73 QDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISE 124
I+ R ++ R + I S +EY H H+ + +LLD + +I++
Sbjct: 96 DYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIAD 150
Query: 125 FGLAKVFPEAHTHITTSDVVGTAGYIAPEY-QQTLSITYMCDIYSFGVLL 173
FGL+ + + + T+ G+ Y APE L D++S GV+L
Sbjct: 151 FGLSNIMTDGNFLKTSC---GSPNYAAPEVISGKLYAGPEVDVWSCGVIL 197
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 26/156 (16%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHL-LVYEFMKNGSLQDILNDVSRG---RRQLD 87
+ +EI L +I+H NI+ L + G HL L+ + + G L D + V +G R
Sbjct: 63 MENEIAVLHKIKHPNIVAL-DDIYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDAS 119
Query: 88 WLARYRTVRGIASGLEYLH----MHQAL-------VLLDHDMEARISEFGLAKVFPEAHT 136
R + + ++YLH +H+ L LD D + IS+FGL+K+ + +
Sbjct: 120 -----RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGS 173
Query: 137 HITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++T+ GT GY+APE + D +S GV+
Sbjct: 174 VLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 15 TALVEADSKLLTEEMMQ--IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL 72
AL + K+L + MQ I EI L +RH +I+ L + ++V E+ N
Sbjct: 42 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 101
Query: 73 QDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISE 124
I+ R ++ R + I S +EY H H+ + +LLD + +I++
Sbjct: 102 DYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIAD 156
Query: 125 FGLAKVFPEAHTHITTSDVVGTAGYIAPEY-QQTLSITYMCDIYSFGVLL 173
FGL+ + + + T+ G+ Y APE L D++S GV+L
Sbjct: 157 FGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 203
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 26/156 (16%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHL-LVYEFMKNGSLQDILNDVSRG---RRQLD 87
+ +EI L +I+H NI+ L + G HL L+ + + G L D + V +G R
Sbjct: 63 MENEIAVLHKIKHPNIVAL-DDIYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDAS 119
Query: 88 WLARYRTVRGIASGLEYLH----MHQAL-------VLLDHDMEARISEFGLAKVFPEAHT 136
R + + ++YLH +H+ L LD D + IS+FGL+K+ + +
Sbjct: 120 -----RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGS 173
Query: 137 HITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++T+ GT GY+APE + D +S GV+
Sbjct: 174 VLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 43/227 (18%)
Query: 4 IRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVT------LGQIRHRNILPLLAHLARP 57
+RK+ +P D+ L K+L + +++R + T L + H ++ L
Sbjct: 47 VRKVTRP--DSGHLYAM--KVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTE 102
Query: 58 GCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH--------MHQ 109
G L+ +F++ G D+ +S+ + ++ +A GL++LH +
Sbjct: 103 GKLYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAE-LALGLDHLHSLGIIYRDLKP 158
Query: 110 ALVLLDHDMEARISEFGLAKVFPEAHTHITTS-DVVGTAGYIAPEYQQTLSITYMCDIYS 168
+LLD + ++++FGL+K EA H + GT Y+APE ++ D +S
Sbjct: 159 ENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWS 215
Query: 169 FGVLLAEEMSLVKWMRNVMTSENPKRAIDSKLLGNGYEEQMLLVLKT 215
+GVL+ E ++T P + D K E M L+LK
Sbjct: 216 YGVLMFE----------MLTGSLPFQGKDRK-------ETMTLILKA 245
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 29 MMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-RQLD 87
+ ++ E+ + + H NI+ L + L+ E+ G + D L V+ GR ++ +
Sbjct: 55 LQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL--VAHGRMKEKE 112
Query: 88 WLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT 139
+++R I S ++Y H +H+ L +LLD DM +I++FG + F T
Sbjct: 113 ARSKFRQ---IVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT 169
Query: 140 TSDVVGTAGYIAPE-YQQTLSITYMCDIYSFGVLL 173
G+ Y APE +Q D++S GV+L
Sbjct: 170 ---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 201
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ ++ V E+M G L D L +L L
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIYI-VMEYMSKGCLLDFLKGEMGKYLRLPQLVD--M 119
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E + +
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFP 178
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 99 ASGLEYLHMHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTL 158
+ G+ Y + +LLD D +I++FG+ K T++ GT YIAPE
Sbjct: 137 SKGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCGTPDYIAPEILLGQ 194
Query: 159 SITYMCDIYSFGVLLAE 175
+ D +SFGVLL E
Sbjct: 195 KYNHSVDWWSFGVLLYE 211
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 26/156 (16%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHL-LVYEFMKNGSLQDILNDVSRG---RRQLD 87
+ +EI L +I+H NI+ L + G HL L+ + + G L D + V +G R
Sbjct: 63 MENEIAVLHKIKHPNIVAL-DDIYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDAS 119
Query: 88 WLARYRTVRGIASGLEYLH----MHQAL-------VLLDHDMEARISEFGLAKVFPEAHT 136
R + + ++YLH +H+ L LD D + IS+FGL+K+ + +
Sbjct: 120 -----RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGS 173
Query: 137 HITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++T+ GT GY+APE + D +S GV+
Sbjct: 174 VLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ ++ V E+M G L D L +L L
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGCLLDFLKGEMGKYLRLPQLVD--M 119
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGLA++ E + +
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFP 178
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 28/180 (15%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSR------ 81
E+ + SE L Q+ H +++ L ++ G LL+ E+ K GSL+ L + +
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 82 --------------GRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDME 119
R L I+ G++YL +H+ L +L+ +
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK 188
Query: 120 ARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+IS+FGL++ E +++ S ++A E T D++SFGVLL E ++L
Sbjct: 189 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 15/151 (9%)
Query: 33 RSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY 92
+ EI L Q + + ++ E++ GS D+L D
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLR-----AGPFDEFQIA 123
Query: 93 RTVRGIASGLEYLHMHQ--------ALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVV 144
++ I GL+YLH + A VLL + ++++FG+A + T I + V
Sbjct: 124 TMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNTFV 181
Query: 145 GTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
GT ++APE Q + DI+S G+ E
Sbjct: 182 GTPFWMAPEVIQQSAYDSKADIWSLGITAIE 212
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 22 SKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSR 81
++L + + ++ E+ + H NI+ L + LV E+ G + D L V+
Sbjct: 50 TQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYL--VAH 107
Query: 82 GR-RQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFP 132
GR ++ + A++R I S ++Y H +H+ L +LLD D +I++FG + F
Sbjct: 108 GRXKEKEARAKFRQ---IVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFT 164
Query: 133 EAHTHITTSDVVGTAGYIAPE-YQQTLSITYMCDIYSFGVLL 173
+ G Y APE +Q D++S GV+L
Sbjct: 165 FGN---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 90 ARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTS 141
ARY +R G++YLH ++ + + L+ DM+ +I +FGLA
Sbjct: 128 ARY-FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKK 184
Query: 142 DVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
D+ GT YIAPE ++ DI+S G +L
Sbjct: 185 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 216
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 30/178 (16%)
Query: 16 ALVEADSKLLTE---EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL 72
+L+ DS+ TE + + + E+ + + H NI+ L + P +V EF+ G L
Sbjct: 51 SLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDL 108
Query: 73 QDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVL-------------LDHDME 119
L D + + W + R + IA G+EY+ ++ LD +
Sbjct: 109 YHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAP 165
Query: 120 --ARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEY--QQTLSITYMCDIYSFGVLL 173
A++++FGL+ + H + S ++G ++APE + S T D YSF ++L
Sbjct: 166 VCAKVADFGLS----QQSVH-SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 100 SGLEYLHMHQALVLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAGYIAPEYQQTL 158
+G+ + + A +++ ++ +FG+A+ ++ +T T+ V+GTA Y++PE +
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 159 SITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENP 192
S+ D+YS G +L E V+T E P
Sbjct: 195 SVDARSDVYSLGCVLYE----------VLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 100 SGLEYLHMHQALVLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAGYIAPEYQQTL 158
+G+ + + A +++ ++ +FG+A+ ++ +T T+ V+GTA Y++PE +
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 159 SITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENP 192
S+ D+YS G +L E V+T E P
Sbjct: 195 SVDARSDVYSLGCVLYE----------VLTGEPP 218
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 90 ARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTS 141
ARY +R G++YLH ++ + + L+ DM+ +I +FGLA
Sbjct: 144 ARY-FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKK 200
Query: 142 DVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
D+ GT YIAPE ++ DI+S G +L
Sbjct: 201 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 100 SGLEYLHMHQALVLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAGYIAPEYQQTL 158
+G+ + + A +++ ++ +FG+A+ ++ +T T+ V+GTA Y++PE +
Sbjct: 152 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 211
Query: 159 SITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENP 192
S+ D+YS G +L E V+T E P
Sbjct: 212 SVDARSDVYSLGCVLYE----------VLTGEPP 235
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 90 ARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLA-KVFPEAHTHITT 140
ARY +R I G +YLH ++ + + L+ D+E +I +FGLA KV + T
Sbjct: 119 ARY-YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT- 176
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
+ GT YIAPE ++ D++S G ++
Sbjct: 177 --LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 207
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 100 SGLEYLHMHQALVLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAGYIAPEYQQTL 158
+G+ + + A +++ ++ +FG+A+ ++ +T T+ V+GTA Y++PE +
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 159 SITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENP 192
S+ D+YS G +L E V+T E P
Sbjct: 195 SVDARSDVYSLGCVLYE----------VLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 100 SGLEYLHMHQALVLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAGYIAPEYQQTL 158
+G+ + + A +++ ++ +FG+A+ ++ +T T+ V+GTA Y++PE +
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 159 SITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENP 192
S+ D+YS G +L E V+T E P
Sbjct: 195 SVDARSDVYSLGCVLYE----------VLTGEPP 218
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + ++RH ++ L A ++ ++ V E+M GSL D L +L L
Sbjct: 230 EAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVD--M 286
Query: 95 VRGIASGLEYL----HMHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
IASG+ Y+ ++H+ L +L+ ++ ++++FGL ++ E + +
Sbjct: 287 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLI-EDNEYTARQGAKFP 345
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ APE T D++SFG+LL E
Sbjct: 346 IKWTAPEAALYGRFTIKSDVWSFGILLTE 374
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 90 ARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLA-KVFPEAHTHITT 140
ARY +R I G +YLH ++ + + L+ D+E +I +FGLA KV + T
Sbjct: 119 ARY-YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT- 176
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
+ GT YIAPE ++ D++S G ++
Sbjct: 177 --LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 207
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 90 ARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLA-KVFPEAHTHITT 140
ARY +R I G +YLH ++ + + L+ D+E +I +FGLA KV + T
Sbjct: 123 ARY-YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT- 180
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
+ GT YIAPE ++ D++S G ++
Sbjct: 181 --LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 211
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 27/184 (14%)
Query: 1 MIAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCH 60
++AI+K ++ D K++ + M+ EI L Q+RH N++ LL +
Sbjct: 52 IVAIKKFLE---------SDDDKMVKKIAMR---EIKLLKQLRHENLVNLLEVCKKKKRW 99
Query: 61 LLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------V 112
LV+EF+ + IL+D+ LD+ + + I +G+ + H H + +
Sbjct: 100 YLVFEFVDH----TILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENI 155
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPE-YQQTLSITYMCDIYSFGV 171
L+ ++ +FG A+ A D V T Y APE + D+++ G
Sbjct: 156 LVSQSGVVKLCDFGFARTL--AAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGC 213
Query: 172 LLAE 175
L+ E
Sbjct: 214 LVTE 217
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 80/197 (40%), Gaps = 27/197 (13%)
Query: 3 AIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLL 62
A+ K+ + +TA + L++E ++I S LGQ H NI+ LL G L+
Sbjct: 75 AVLKVAVKMLKSTAHADEKEALMSE--LKIMSH---LGQ--HENIVNLLGACTHGGPVLV 127
Query: 63 VYEFMKNGSLQDIL------------NDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQA 110
+ E+ G L + L N QL +A G+ +L
Sbjct: 128 ITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNC 187
Query: 111 L--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITY 162
+ VLL + A+I +FGLA+ +I + ++APE T
Sbjct: 188 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 247
Query: 163 MCDIYSFGVLLAEEMSL 179
D++S+G+LL E SL
Sbjct: 248 QSDVWSYGILLWEIFSL 264
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 13/82 (15%)
Query: 101 GLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAP 152
GLE++H + A +LLD RIS+ GLA F + H + VGT GY+AP
Sbjct: 303 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAP 358
Query: 153 EY-QQTLSITYMCDIYSFGVLL 173
E Q+ ++ D +S G +L
Sbjct: 359 EVLQKGVAYDSSADWFSLGCML 380
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 13/82 (15%)
Query: 101 GLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAP 152
GLE++H + A +LLD RIS+ GLA F + H + VGT GY+AP
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAP 359
Query: 153 EY-QQTLSITYMCDIYSFGVLL 173
E Q+ ++ D +S G +L
Sbjct: 360 EVLQKGVAYDSSADWFSLGCML 381
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 42/196 (21%)
Query: 34 SEIVTLGQI-RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY 92
SE+ L + H NI+ LL G L++ E+ G L + L RR+ D
Sbjct: 91 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL------RRKRDSFICS 144
Query: 93 RTVRGI--------------------ASGLEYLH----MHQAL----VLLDHDMEARISE 124
+T I A G+ +L +H+ L +LL H +I +
Sbjct: 145 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 204
Query: 125 FGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMR 184
FGLA+ ++ + ++APE T+ D++S+G+ L E SL
Sbjct: 205 FGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL----- 259
Query: 185 NVMTSENPKRAIDSKL 200
+S P +DSK
Sbjct: 260 --GSSPYPGMPVDSKF 273
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 81/185 (43%), Gaps = 41/185 (22%)
Query: 27 EEMMQIRSEIVTLGQIRH-------------RNILPLLAHLARPGCHLLVYEFMKNGSLQ 73
E++ I SE++ L + H RN + + + + + E+ +N +L
Sbjct: 44 EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLY 103
Query: 74 DILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEF 125
D+++ + +++ ++ +R R I L Y+H +H+ L + +D +I +F
Sbjct: 104 DLIHSENLNQQRDEY---WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDF 160
Query: 126 GLAK--------------VFPEAHTHITTSDVVGTAGYIAPEY-QQTLSITYMCDIYSFG 170
GLAK P + ++T++ +GTA Y+A E T D+YS G
Sbjct: 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSA--IGTAMYVATEVLDGTGHYNEKIDMYSLG 218
Query: 171 VLLAE 175
++ E
Sbjct: 219 IIFFE 223
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 13/82 (15%)
Query: 101 GLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAP 152
GLE++H + A +LLD RIS+ GLA F + H + VGT GY+AP
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAP 359
Query: 153 EY-QQTLSITYMCDIYSFGVLL 173
E Q+ ++ D +S G +L
Sbjct: 360 EVLQKGVAYDSSADWFSLGCML 381
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 13/82 (15%)
Query: 101 GLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAP 152
GLE++H + A +LLD RIS+ GLA F + H + VGT GY+AP
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAP 359
Query: 153 EY-QQTLSITYMCDIYSFGVLL 173
E Q+ ++ D +S G +L
Sbjct: 360 EVLQKGVAYDSSADWFSLGCML 381
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 42/196 (21%)
Query: 34 SEIVTLGQI-RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY 92
SE+ L + H NI+ LL G L++ E+ G L + L RR+ D
Sbjct: 75 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL------RRKRDSFICS 128
Query: 93 RTVRGI--------------------ASGLEYLH----MHQAL----VLLDHDMEARISE 124
+T I A G+ +L +H+ L +LL H +I +
Sbjct: 129 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 188
Query: 125 FGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMR 184
FGLA+ ++ + ++APE T+ D++S+G+ L E SL
Sbjct: 189 FGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL----- 243
Query: 185 NVMTSENPKRAIDSKL 200
+S P +DSK
Sbjct: 244 --GSSPYPGMPVDSKF 257
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 42/196 (21%)
Query: 34 SEIVTLGQI-RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY 92
SE+ L + H NI+ LL G L++ E+ G L + L RR+ D
Sbjct: 93 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL------RRKRDSFICS 146
Query: 93 RTVRGI--------------------ASGLEYLH----MHQAL----VLLDHDMEARISE 124
+T I A G+ +L +H+ L +LL H +I +
Sbjct: 147 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 206
Query: 125 FGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMR 184
FGLA+ ++ + ++APE T+ D++S+G+ L E SL
Sbjct: 207 FGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL----- 261
Query: 185 NVMTSENPKRAIDSKL 200
+S P +DSK
Sbjct: 262 --GSSPYPGMPVDSKF 275
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 99 ASGLEYLHMHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTL 158
+ G+ Y + +LLD D +I++FG+ K T+ GT YIAPE
Sbjct: 136 SKGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGTPDYIAPEILLGQ 193
Query: 159 SITYMCDIYSFGVLLAE 175
+ D +SFGVLL E
Sbjct: 194 KYNHSVDWWSFGVLLYE 210
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 71/163 (43%), Gaps = 12/163 (7%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E T+ ++ H ++ ++ +V E++ NG L + L +G L
Sbjct: 53 EAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL---EM 109
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ G+ +L HQ + L+D D+ ++S+FG+ + + ++++
Sbjct: 110 CYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-YVSSVGTKFP 168
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTS 189
+ APE + D+++FG+L+ E SL K ++ T+
Sbjct: 169 VKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN 211
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 42/196 (21%)
Query: 34 SEIVTLGQI-RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY 92
SE+ L + H NI+ LL G L++ E+ G L + L RR+ D
Sbjct: 98 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL------RRKRDSFICS 151
Query: 93 RTVRGI--------------------ASGLEYLH----MHQAL----VLLDHDMEARISE 124
+T I A G+ +L +H+ L +LL H +I +
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 211
Query: 125 FGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMR 184
FGLA+ ++ + ++APE T+ D++S+G+ L E SL
Sbjct: 212 FGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL----- 266
Query: 185 NVMTSENPKRAIDSKL 200
+S P +DSK
Sbjct: 267 --GSSPYPGMPVDSKF 280
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E M E+ + + HRN++ L + P + V E GSL D L +G L
Sbjct: 53 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL 110
Query: 87 DWLARYRTVRGIASGLEYLHMHQ---------ALVLLDHDMEARISEFGLAKVFPEAHTH 137
L+RY +A G+ YL + L+L D+ +I +FGL + P+ H
Sbjct: 111 GTLSRYAV--QVAEGMGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDH 167
Query: 138 ITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ + APE +T + ++ D + FGV L E
Sbjct: 168 XVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE 206
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 22 SKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSR 81
++L + ++ E+ + + H NI+ L + L+ E+ G + D L V+
Sbjct: 51 TQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL--VAH 108
Query: 82 GR-RQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFP 132
GR ++ + +++R I S ++Y H +H+ L +LLD DM +I++FG + F
Sbjct: 109 GRMKEKEARSKFRQ---IVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165
Query: 133 EAHTHITTSDVVGTAGYIAPE-YQQTLSITYMCDIYSFGVLL 173
G Y APE +Q D++S GV+L
Sbjct: 166 VGG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E M E+ + + HRN++ L + P + V E GSL D L +G L
Sbjct: 57 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL 114
Query: 87 DWLARYRTVRGIASGLEYLHMHQ---------ALVLLDHDMEARISEFGLAKVFPEAHTH 137
L+RY +A G+ YL + L+L D+ +I +FGL + P+ H
Sbjct: 115 GTLSRYAVQ--VAEGMGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDH 171
Query: 138 ITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ + APE +T + ++ D + FGV L E
Sbjct: 172 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE 210
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E M E+ + + HRN++ L + P + V E GSL D L +G L
Sbjct: 53 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL 110
Query: 87 DWLARYRTVRGIASGLEYLHMHQ---------ALVLLDHDMEARISEFGLAKVFPEAHTH 137
L+RY +A G+ YL + L+L D+ +I +FGL + P+ H
Sbjct: 111 GTLSRYAV--QVAEGMGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDH 167
Query: 138 ITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ + APE +T + ++ D + FGV L E
Sbjct: 168 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE 206
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 42/196 (21%)
Query: 34 SEIVTLGQI-RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY 92
SE+ L + H NI+ LL G L++ E+ G L + L RR+ D
Sbjct: 98 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL------RRKRDSFICS 151
Query: 93 RTVRGI--------------------ASGLEYLH----MHQAL----VLLDHDMEARISE 124
+T I A G+ +L +H+ L +LL H +I +
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 211
Query: 125 FGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMR 184
FGLA+ ++ + ++APE T+ D++S+G+ L E SL
Sbjct: 212 FGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL----- 266
Query: 185 NVMTSENPKRAIDSKL 200
+S P +DSK
Sbjct: 267 --GSSPYPGMPVDSKF 280
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E M E+ + + HRN++ L + P + V E GSL D L +G L
Sbjct: 63 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL 120
Query: 87 DWLARYRTVRGIASGLEYLHMHQ---------ALVLLDHDMEARISEFGLAKVFPEAHTH 137
L+RY +A G+ YL + L+L D+ +I +FGL + P+ H
Sbjct: 121 GTLSRYAVQ--VAEGMGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDH 177
Query: 138 ITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ + APE +T + ++ D + FGV L E
Sbjct: 178 XVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE 216
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLD 87
++ +I EI + Q +++ + +V E+ GS+ DI+ ++ + D
Sbjct: 67 DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTE-D 125
Query: 88 WLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHIT 139
+A ++ GLEYLH + + +LL+ + A++++FG+A +
Sbjct: 126 EIAT--ILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-- 181
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ V+GT ++APE Q + + DI+S G+ E
Sbjct: 182 RNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIE 217
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E M E+ + + HRN++ L + P + V E GSL D L +G L
Sbjct: 53 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL 110
Query: 87 DWLARYRTVRGIASGLEYLHMHQ---------ALVLLDHDMEARISEFGLAKVFPEAHTH 137
L+RY +A G+ YL + L+L D+ +I +FGL + P+ H
Sbjct: 111 GTLSRYAVQ--VAEGMGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDH 167
Query: 138 ITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ + APE +T + ++ D + FGV L E
Sbjct: 168 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE 206
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E M E+ + + HRN++ L + P + V E GSL D L +G L
Sbjct: 63 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL 120
Query: 87 DWLARYRTVRGIASGLEYLHMHQ---------ALVLLDHDMEARISEFGLAKVFPEAHTH 137
L+RY +A G+ YL + L+L D+ +I +FGL + P+ H
Sbjct: 121 GTLSRYAVQ--VAEGMGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDH 177
Query: 138 ITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ + APE +T + ++ D + FGV L E
Sbjct: 178 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE 216
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 28/180 (15%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSR------ 81
E+ + SE L Q+ H +++ L ++ G LL+ E+ K GSL+ L + +
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 82 --------------GRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDME 119
R L I+ G++YL +H+ L +L+ +
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK 188
Query: 120 ARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+IS+FGL++ E + + S ++A E T D++SFGVLL E ++L
Sbjct: 189 MKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 28/180 (15%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSR------ 81
E+ + SE L Q+ H +++ L ++ G LL+ E+ K GSL+ L + +
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 82 --------------GRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDME 119
R L I+ G++YL +H+ L +L+ +
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRK 188
Query: 120 ARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+IS+FGL++ E + + S ++A E T D++SFGVLL E ++L
Sbjct: 189 MKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL 86
E M E+ + + HRN++ L + P + V E GSL D L +G L
Sbjct: 57 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL 114
Query: 87 DWLARYRTVRGIASGLEYLHMHQ---------ALVLLDHDMEARISEFGLAKVFPEAHTH 137
L+RY +A G+ YL + L+L D+ +I +FGL + P+ H
Sbjct: 115 GTLSRYAVQ--VAEGMGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDH 171
Query: 138 ITTSDVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ + APE +T + ++ D + FGV L E
Sbjct: 172 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE 210
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 100 SGLEYLHMHQALVLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAGYIAPEYQQTL 158
+G+ + + A +L+ ++ +FG+A+ ++ + T+ V+GTA Y++PE +
Sbjct: 135 NGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGD 194
Query: 159 SITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENP 192
S+ D+YS G +L E V+T E P
Sbjct: 195 SVDARSDVYSLGCVLYE----------VLTGEPP 218
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 17/151 (11%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
+E+V + H N++ + + +V EF++ G+L DI+ Q+ +
Sbjct: 91 NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCL-- 148
Query: 94 TVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGL-AKVFPEAHTHITTSDVV 144
+ L YLH +H+ + +LL D ++S+FG A+V E +V
Sbjct: 149 ---SVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR---KXLV 202
Query: 145 GTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
GT ++APE L DI+S G+++ E
Sbjct: 203 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIE 233
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 26/156 (16%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRG----RRQLD 87
+R+EI L ++ H NI+ L P LV E + G L D + V +G R D
Sbjct: 95 VRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRI--VEKGYYSERDAAD 152
Query: 88 WLARYRTVRGIASGLEYLH----MHQAL-------VLLDHDMEARISEFGLAKVFPEAHT 136
V+ I + YLH +H+ L D +I++FGL+K+
Sbjct: 153 ------AVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI---VEH 203
Query: 137 HITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
+ V GT GY APE + + D++S G++
Sbjct: 204 QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGII 239
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 22/166 (13%)
Query: 27 EEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL-LVYEFMKNGSLQDILNDVSRG--- 82
+ + ++ +G + H +I+ LL PG L LV +++ GSL D + RG
Sbjct: 57 QSFQAVTDHMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQ-HRGALG 113
Query: 83 -RRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPE 133
+ L+W + IA G+ YL H + VLL + ++++FG+A + P
Sbjct: 114 PQLLLNWGVQ------IAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ S+ ++A E T+ D++S+GV + E M+
Sbjct: 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTF 213
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 111
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +D
Sbjct: 112 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTD 165
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 79/187 (42%), Gaps = 41/187 (21%)
Query: 27 EEMMQIRSEIVTLGQIRH-------------RNILPLLAHLARPGCHLLVYEFMKNGSLQ 73
E++ I SE+ L + H RN + + + + E+ +N +L
Sbjct: 44 EKLSTILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLY 103
Query: 74 DILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEF 125
D+++ + +++ ++ +R R I L Y+H +H+ L + +D +I +F
Sbjct: 104 DLIHSENLNQQRDEY---WRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDF 160
Query: 126 GLAK--------------VFPEAHTHITTSDVVGTAGYIAPEY-QQTLSITYMCDIYSFG 170
GLAK P + ++T++ +GTA Y+A E T D YS G
Sbjct: 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSA--IGTAXYVATEVLDGTGHYNEKIDXYSLG 218
Query: 171 VLLAEEM 177
++ E +
Sbjct: 219 IIFFEXI 225
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 112
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +D
Sbjct: 113 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTD 166
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 199
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHL-LVYEFMKNGSLQDILNDVSRG----RRQL 86
+ ++ +G + H +I+ LL PG L LV +++ GSL D + RG + L
Sbjct: 80 VTDHMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQ-HRGALGPQLLL 136
Query: 87 DWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHI 138
+W + IA G+ YL H + VLL + ++++FG+A + P +
Sbjct: 137 NWGVQ------IAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 190
Query: 139 TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
S+ ++A E T+ D++S+GV + E M+
Sbjct: 191 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTF 231
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 111
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +D
Sbjct: 112 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTD 165
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 139 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 130 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 141 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query: 90 ARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLA-KVFPEAHTHITT 140
ARY +R I G +YLH ++ + + L+ D+E +I +FGLA KV +
Sbjct: 141 ARY-YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDGERK 196
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
+ GT YIAPE ++ D++S G ++
Sbjct: 197 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 116
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +D
Sbjct: 117 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTD 170
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 203
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 90 ARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLA-KVFPEAHTHITT 140
ARY +R G++YLH ++ + + L+ DM+ +I +FGLA K+ + T
Sbjct: 144 ARY-FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT- 201
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
+ GT YIAPE ++ DI+S G +L
Sbjct: 202 --LCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query: 90 ARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLA-KVFPEAHTHITT 140
ARY +R I G +YLH ++ + + L+ D+E +I +FGLA KV +
Sbjct: 143 ARY-YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDGERK 198
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
+ GT YIAPE ++ D++S G ++
Sbjct: 199 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 231
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 32/178 (17%)
Query: 23 KLLTEEMMQIRS----EIVTLGQIR-HRNILPLLAHLARPGCHLLVYEFMKNGSLQDILN 77
K++ ++ IRS E+ L Q + HRN+L L+ LV+E M+ GS IL+
Sbjct: 44 KIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS---ILS 100
Query: 78 DVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDME---ARISEFG 126
+ + RR + L V+ +AS L++LH H+ L +L +H + +I +F
Sbjct: 101 HIHK-RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFD 159
Query: 127 LA---KVFPEAHTHITTSDVV---GTAGYIAPEYQQTLS-----ITYMCDIYSFGVLL 173
L K+ + + I+T +++ G+A Y+APE + S CD++S GV+L
Sbjct: 160 LGSGIKLNGDC-SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 14/168 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV------SR 81
E ++ +E + +++ LL +++ L+V E M +G L+ L + +
Sbjct: 60 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 119
Query: 82 GRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVFPE 133
GR + IA G+ YL+ +H+ L ++ HD +I +FG+ + E
Sbjct: 120 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
+ ++APE + T D++SFGV+L E SL +
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 227
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 30/178 (16%)
Query: 16 ALVEADSKLLTE---EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL 72
+L+ DS+ TE + + + E+ + + H NI+ L + P +V EF+ G L
Sbjct: 51 SLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDL 108
Query: 73 QDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVL-------------LDHDME 119
L D + + W + R + IA G+EY+ ++ LD +
Sbjct: 109 YHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAP 165
Query: 120 --ARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEY--QQTLSITYMCDIYSFGVLL 173
A++++FG + + H + S ++G ++APE + S T D YSF ++L
Sbjct: 166 VCAKVADFGTS----QQSVH-SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV------SR 81
E ++ +E + +++ LL +++ L+V E M +G L+ L + +
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 82 GRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVFPE 133
GR + IA G+ YL+ +H+ L ++ HD +I +FG+ + E
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
+ + ++APE + T D++SFGV+L E SL +
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 78/194 (40%), Gaps = 26/194 (13%)
Query: 23 KLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRG 82
K+L + M+ +R+ T RNIL + H P L+Y F G L IL +S G
Sbjct: 51 KVLKKAMI-VRNAKDTAHTKAERNILEEVKH---PFIVDLIYAFQTGGKLYLILEYLSGG 106
Query: 83 R--RQLD------------WLARYRTVRGI--ASGLEYLHMHQALVLLDHDMEARISEFG 126
QL+ +LA G G+ Y + ++L+H ++++FG
Sbjct: 107 ELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFG 166
Query: 127 LAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNV 186
L K H T GT Y+APE D +S G L+ + ++
Sbjct: 167 LCK--ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP----P 220
Query: 187 MTSENPKRAIDSKL 200
T EN K+ ID L
Sbjct: 221 FTGENRKKTIDKIL 234
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV------SR 81
E ++ +E + +++ LL +++ L+V E M +G L+ L + +
Sbjct: 64 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 123
Query: 82 GRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVFPE 133
GR + IA G+ YL+ +H+ L ++ HD +I +FG+ + E
Sbjct: 124 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
+ + ++APE + T D++SFGV+L E SL +
Sbjct: 184 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 231
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H ++ V T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 14/168 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV------SR 81
E ++ +E + +++ LL +++ L+V E M +G L+ L + +
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 82 GRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVFPE 133
GR + IA G+ YL+ +H+ L ++ HD +I +FG+ + E
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
+ ++APE + T D++SFGV+L E SL +
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV------SR 81
E ++ +E + +++ LL +++ L+V E M +G L+ L + +
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 82 GRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVFPE 133
GR + IA G+ YL+ +H+ L ++ HD +I +FG+ + E
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
+ + ++APE + T D++SFGV+L E SL +
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 14/168 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV------SR 81
E ++ +E + +++ LL +++ L+V E M +G L+ L + +
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 82 GRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVFPE 133
GR + IA G+ YL+ +H+ L ++ HD +I +FG+ + E
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
+ ++APE + T D++SFGV+L E SL +
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query: 90 ARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLA-KVFPEAHTHITT 140
ARY +R I G +YLH ++ + + L+ D+E +I +FGLA KV +
Sbjct: 117 ARY-YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDGERK 172
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
+ GT YIAPE ++ D++S G ++
Sbjct: 173 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIM 205
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV------SR 81
E ++ +E + +++ LL +++ L+V E M +G L+ L + +
Sbjct: 62 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 121
Query: 82 GRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVFPE 133
GR + IA G+ YL+ +H+ L ++ HD +I +FG+ + E
Sbjct: 122 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 181
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
+ + ++APE + T D++SFGV+L E SL +
Sbjct: 182 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 229
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 78/194 (40%), Gaps = 26/194 (13%)
Query: 23 KLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRG 82
K+L + M+ +R+ T RNIL + H P L+Y F G L IL +S G
Sbjct: 51 KVLKKAMI-VRNAKDTAHTKAERNILEEVKH---PFIVDLIYAFQTGGKLYLILEYLSGG 106
Query: 83 R--RQLD------------WLARYRTVRGI--ASGLEYLHMHQALVLLDHDMEARISEFG 126
QL+ +LA G G+ Y + ++L+H ++++FG
Sbjct: 107 ELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFG 166
Query: 127 LAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNV 186
L K H T GT Y+APE D +S G L+ + ++
Sbjct: 167 LCK--ESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP----P 220
Query: 187 MTSENPKRAIDSKL 200
T EN K+ ID L
Sbjct: 221 FTGENRKKTIDKIL 234
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV------SR 81
E ++ +E + +++ LL +++ L+V E M +G L+ L + +
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 82 GRRQLDWLARYRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVFPE 133
GR + IA G+ YL+ +H+ L ++ HD +I +FG+ + E
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
+ + ++APE + T D++SFGV+L E SL +
Sbjct: 183 TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H + V T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +LL+ + +I +FGLA+V H H + V T
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +SR Q A
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRT--A 115
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL + E +I++FG + P + +
Sbjct: 116 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR----RTT 169
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 202
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 29/158 (18%)
Query: 14 ATALVEADSKLLTEEMMQ-----IRSEIVTLGQIR-HRNILPLLAHLARPGCHLLVYEFM 67
A ++E ++ L+ E ++ R E L Q+ H +I+ L+ LV++ M
Sbjct: 123 AVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLM 182
Query: 68 KNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDME 119
+ G L D L + + L +R + + +LH +H+ L +LLD +M+
Sbjct: 183 RKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQ 238
Query: 120 ARISEFGLAKVFPEAHTHITTS----DVVGTAGYIAPE 153
R+S+FG + H+ ++ GT GY+APE
Sbjct: 239 IRLSDFGFS-------CHLEPGEKLRELCGTPGYLAPE 269
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR--TA 137
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + D
Sbjct: 138 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RDD 191
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 224
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 30/178 (16%)
Query: 16 ALVEADSKLLTE---EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL 72
+L+ DS+ TE + + + E+ + + H NI+ L + P +V EF+ G L
Sbjct: 51 SLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDL 108
Query: 73 QDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVL-------------LDHDME 119
L D + + W + R + IA G+EY+ ++ LD +
Sbjct: 109 YHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAP 165
Query: 120 --ARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEY--QQTLSITYMCDIYSFGVLL 173
A++++F L+ + H + S ++G ++APE + S T D YSF ++L
Sbjct: 166 VCAKVADFSLS----QQSVH-SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 33/170 (19%)
Query: 34 SEIVTLGQIRHRNILPLLAH--LARPGCH--LLVYEFMKNGSLQDILNDVSRGRRQLDWL 89
+E+ +RH NIL +A +R L+ + + GSL D L + LD +
Sbjct: 51 TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTV 105
Query: 90 ARYRTVRGIASGLEYLHM------------HQAL----VLLDHDMEARISEFGLAKVFPE 133
+ R V IASGL +LH+ H+ L +L+ + + I++ GLA + +
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
Query: 134 AHTHITTSDV--VGTAGYIAPEY-QQTLSITYM-----CDIYSFGVLLAE 175
+ + + VGT Y+APE +T+ + DI++FG++L E
Sbjct: 166 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 215
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 34/179 (18%)
Query: 26 TEEMMQIR-SEIVTLGQIRHRNILPLLA-HLARPGCHLLVY---EFMKNGSLQDILNDVS 80
TEE R +EI +RH NIL +A + G +Y ++ +NGSL D L +
Sbjct: 71 TEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT 130
Query: 81 RGRRQLDWLARYRTVRGIASGLEYLHM------------HQAL----VLLDHDMEARISE 124
+ + LA Y +V SGL +LH H+ L +L+ + I++
Sbjct: 131 LDAKSMLKLA-YSSV----SGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185
Query: 125 FGLAKVF--PEAHTHITTSDVVGTAGYIAPEY-QQTLSITY-----MCDIYSFGVLLAE 175
GLA F I + VGT Y+ PE ++L+ + M D+YSFG++L E
Sbjct: 186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWE 244
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 114
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + D
Sbjct: 115 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RDD 168
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 33/170 (19%)
Query: 34 SEIVTLGQIRHRNILPLLAH--LARPGCH--LLVYEFMKNGSLQDILNDVSRGRRQLDWL 89
+E+ +RH NIL +A +R L+ + + GSL D L + LD +
Sbjct: 51 TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTV 105
Query: 90 ARYRTVRGIASGLEYLHM------------HQAL----VLLDHDMEARISEFGLAKVFPE 133
+ R V IASGL +LH+ H+ L +L+ + + I++ GLA + +
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
Query: 134 AHTHITTSDV--VGTAGYIAPEY-QQTLSITYM-----CDIYSFGVLLAE 175
+ + + VGT Y+APE +T+ + DI++FG++L E
Sbjct: 166 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 215
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 33/170 (19%)
Query: 34 SEIVTLGQIRHRNILPLLAH--LARPGCH--LLVYEFMKNGSLQDILNDVSRGRRQLDWL 89
+E+ +RH NIL +A +R L+ + + GSL D L + LD +
Sbjct: 80 TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTV 134
Query: 90 ARYRTVRGIASGLEYLHM------------HQAL----VLLDHDMEARISEFGLAKVFPE 133
+ R V IASGL +LH+ H+ L +L+ + + I++ GLA + +
Sbjct: 135 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 194
Query: 134 AHTHITTSDV--VGTAGYIAPEY-QQTLSITYM-----CDIYSFGVLLAE 175
+ + + VGT Y+APE +T+ + DI++FG++L E
Sbjct: 195 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 244
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +SR Q A
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRT--A 115
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL + E +I++FG + P +
Sbjct: 116 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR----RDT 169
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 202
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 32/181 (17%)
Query: 34 SEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYR 93
+E+V + +H N++ + ++ EF++ G+L DI++ V Q+ +
Sbjct: 91 NEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVC--- 147
Query: 94 TVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFG----LAKVFPEAHTHITTS 141
+ L YLH + +LL D ++S+FG ++K P+
Sbjct: 148 --EAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKX----- 200
Query: 142 DVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEM---------SLVKWMRNVMTSENP 192
+VGT ++APE DI+S G+++ E + S V+ M+ + S P
Sbjct: 201 -LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP 259
Query: 193 K 193
K
Sbjct: 260 K 260
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHIT-TSDVVGTAG 148
I GL+Y+H +H+ L +L++ + +I +FGLA++ H H ++ V T
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 149 YIAPEYQ-QTLSITYMCDIYSFGVLLAEEMS 178
Y APE + T DI+S G +LAE +S
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 99 ASGLEYLHMHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTL 158
+ G+ Y + V+LD + +I++FG+ K +TT GT YIAPE
Sbjct: 460 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE--NIWDGVTTKXFCGTPDYIAPEIIAYQ 517
Query: 159 SITYMCDIYSFGVLLAE 175
D ++FGVLL E
Sbjct: 518 PYGKSVDWWAFGVLLYE 534
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 90 ARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTS 141
ARY +R G++YLH ++ + + L+ DM+ +I +FGLA
Sbjct: 144 ARY-FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKK 200
Query: 142 DVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
+ GT YIAPE ++ DI+S G +L
Sbjct: 201 XLCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 99 ASGLEYLHMHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTL 158
+ G+ Y + V+LD + +I++FG+ K +TT GT YIAPE
Sbjct: 139 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQ 196
Query: 159 SITYMCDIYSFGVLLAE 175
D ++FGVLL E
Sbjct: 197 PYGKSVDWWAFGVLLYE 213
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 61/147 (41%), Gaps = 37/147 (25%)
Query: 60 HLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHM------------ 107
+LLV E+ NGSL L+ DW++ R + GL YLH
Sbjct: 87 YLLVMEYYPNGSLXKYLS-----LHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI 141
Query: 108 -HQAL----VLLDHDMEARISEFGLAK-------VFPEAHTHITTSDVVGTAGYIAPEY- 154
H+ L VL+ +D IS+FGL+ V P + S+ VGT Y+APE
Sbjct: 142 SHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE-VGTIRYMAPEVL 200
Query: 155 ------QQTLSITYMCDIYSFGVLLAE 175
+ S D+Y+ G++ E
Sbjct: 201 EGAVNLRDXESALKQVDMYALGLIYWE 227
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G + L +S+ Q A
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRT--A 116
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +
Sbjct: 117 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTT 170
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 203
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 19/154 (12%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
+I E+ L Q+ H N++ L +L+ E + G L D L + L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEE 116
Query: 91 RYRTVRGIASGLEYLHMH---------QALVLLDHDM---EARISEFGLAKVFPEAHTHI 138
++ I G+ YLH + ++LLD ++ ++ +FGLA E +
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGV 173
Query: 139 TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 19/154 (12%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
+I E+ L Q+ H N++ L +L+ E + G L D L + L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEE 116
Query: 91 RYRTVRGIASGLEYLHMH---------QALVLLDHDM---EARISEFGLAKVFPEAHTHI 138
++ I G+ YLH + ++LLD ++ ++ +FGLA E +
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGV 173
Query: 139 TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 19/154 (12%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
+I E+ L Q+ H NI+ L +L+ E + G L D L + L
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEE 116
Query: 91 RYRTVRGIASGLEYLHMH---------QALVLLDHDM---EARISEFGLAKVFPEAHTHI 138
++ I G+ YLH + ++LLD ++ ++ +FGLA E +
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGV 173
Query: 139 TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 85/206 (41%), Gaps = 38/206 (18%)
Query: 3 AIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLL 62
A+ K+ + +TA + L++E ++I S LGQ H NI+ LL G L+
Sbjct: 60 AVLKVAVKMLKSTAHADEKEALMSE--LKIMSH---LGQ--HENIVNLLGACTHGGPVLV 112
Query: 63 VYEFMKNGSLQDILN--------------------DVSRGRR-QLDWLARYRTVRGIASG 101
+ E+ G L + L D GR +L L + + +A G
Sbjct: 113 ITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQ--VAQG 170
Query: 102 LEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPE 153
+ +L + VLL + A+I +FGLA+ +I + ++APE
Sbjct: 171 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 230
Query: 154 YQQTLSITYMCDIYSFGVLLAEEMSL 179
T D++S+G+LL E SL
Sbjct: 231 SIFDCVYTVQSDVWSYGILLWEIFSL 256
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 19/154 (12%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
+I E+ L Q+ H N++ L +L+ E + G L D L + L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEE 116
Query: 91 RYRTVRGIASGLEYLHMH---------QALVLLDHDM---EARISEFGLAKVFPEAHTHI 138
++ I G+ YLH + ++LLD ++ ++ +FGLA E +
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGV 173
Query: 139 TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 22/156 (14%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
++ EI+ +RH NI+ + P +V E+ G L + + + GR D A
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDE-A 117
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEAR--ISEFGLAKVFPEAHTHITT 140
R+ + + SG+ Y H Q LLD R I FG +K + H
Sbjct: 118 RF-FFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQP 173
Query: 141 SDVVGTAGYIAPEYQQTLSITY---MCDIYSFGVLL 173
D VGT YIAPE L Y + D++S GV L
Sbjct: 174 KDTVGTPAYIAPEV--LLKKEYDGKVADVWSCGVTL 207
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 19/154 (12%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
+I E+ L Q+ H N++ L +L+ E + G L D L + L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEE 116
Query: 91 RYRTVRGIASGLEYLHMH---------QALVLLDHDM---EARISEFGLAKVFPEAHTHI 138
++ I G+ YLH + ++LLD ++ ++ +FGLA E +
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGV 173
Query: 139 TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 19/154 (12%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
+I E+ L Q+ H N++ L +L+ E + G L D L + L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEE 116
Query: 91 RYRTVRGIASGLEYLHMH---------QALVLLDHDM---EARISEFGLAKVFPEAHTHI 138
++ I G+ YLH + ++LLD ++ ++ +FGLA E +
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGV 173
Query: 139 TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 23 KLLTEEMMQIRSEIVT------LGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL 76
K+L + +++R + T L ++ H I+ L G L+ +F++ G D+
Sbjct: 58 KVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG---DLF 114
Query: 77 NDVSRGRRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLA 128
+S+ + ++ +A L++LH + +LLD + ++++FGL+
Sbjct: 115 TRLSKEVMFTEEDVKFYLAE-LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Query: 129 KVFPEAHTHITTS-DVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
K E+ H + GT Y+APE T D +SFGVL+ E
Sbjct: 174 K---ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFE 218
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 111
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + ++
Sbjct: 112 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTE 165
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL------------ND 78
+ R E + +++H N++ LL + + +++ + +G L + L +D
Sbjct: 75 EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 134
Query: 79 VSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKV 130
+ L+ V IA+G+EYL H + VL+ + +IS+ GL +
Sbjct: 135 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 131 FPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
A + + + ++APE + DI+S+GV+L E S
Sbjct: 195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
+I E+ L +IRH NI+ L +L+ E + G L D L + + L
Sbjct: 61 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDE 116
Query: 91 RYRTVRGIASGLEYLHMH---------QALVLLDHDM---EARISEFGLAKVFPEAHTHI 138
+ ++ I G+ YLH + ++LLD ++ ++ +FG+A +
Sbjct: 117 ATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF- 175
Query: 139 TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 176 --KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 22/171 (12%)
Query: 23 KLLTEEMMQIRSEIVT------LGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL 76
K+L + +++R + T L ++ H I+ L G L+ +F++ G D+
Sbjct: 59 KVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG---DLF 115
Query: 77 NDVSRGRRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLA 128
+S+ + ++ +A L++LH + +LLD + ++++FGL+
Sbjct: 116 TRLSKEVMFTEEDVKFYLAE-LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 174
Query: 129 KVFPEAHTHITTS-DVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
K E+ H + GT Y+APE T D +SFGVL+ E ++
Sbjct: 175 K---ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 222
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 22/171 (12%)
Query: 23 KLLTEEMMQIRSEIVT------LGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL 76
K+L + +++R + T L ++ H I+ L G L+ +F++ G D+
Sbjct: 58 KVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG---DLF 114
Query: 77 NDVSRGRRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLA 128
+S+ + ++ +A L++LH + +LLD + ++++FGL+
Sbjct: 115 TRLSKEVMFTEEDVKFYLAE-LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Query: 129 KVFPEAHTHITTS-DVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
K E+ H + GT Y+APE T D +SFGVL+ E ++
Sbjct: 174 K---ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
+I E+ L +IRH NI+ L +L+ E + G L D L + + L
Sbjct: 54 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDE 109
Query: 91 RYRTVRGIASGLEYLHMH---------QALVLLDHDM---EARISEFGLAKVFPEAHTHI 138
+ ++ I G+ YLH + ++LLD ++ ++ +FG+A +
Sbjct: 110 ATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF- 168
Query: 139 TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 169 --KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 200
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 22/156 (14%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
++ EI+ +RH NI+ + P +V E+ G L + + + GR D A
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDE-A 117
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEAR--ISEFGLAKVFPEAHTHITT 140
R+ + + SG+ Y H Q LLD R I++FG +K + H
Sbjct: 118 RF-FFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA---SVLHSQP 173
Query: 141 SDVVGTAGYIAPEYQQTLSITY---MCDIYSFGVLL 173
VGT YIAPE L Y + D++S GV L
Sbjct: 174 KSAVGTPAYIAPEV--LLKKEYDGKVADVWSCGVTL 207
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL------------ND 78
+ R E + +++H N++ LL + + +++ + +G L + L +D
Sbjct: 58 EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 117
Query: 79 VSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKV 130
+ L+ V IA+G+EYL H + VL+ + +IS+ GL +
Sbjct: 118 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 131 FPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
A + + + ++APE + DI+S+GV+L E S
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
+I E+ L +IRH NI+ L +L+ E + G L D L + + L
Sbjct: 75 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDE 130
Query: 91 RYRTVRGIASGLEYLHMH---------QALVLLDHDM---EARISEFGLAKVFPEAHTHI 138
+ ++ I G+ YLH + ++LLD ++ ++ +FG+A +
Sbjct: 131 ATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF- 189
Query: 139 TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 190 --KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 221
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
+++EI + Q+ H ++ L +L+ EF+ G L + ++ ++
Sbjct: 95 VKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL---FDRIAAEDYKMSEAEV 151
Query: 92 YRTVRGIASGLEYLHMHQALVLLDHDME-----------ARISEFGLA-KVFPEAHTHIT 139
+R GL+++H H ++V LD E +I +FGLA K+ P+ +T
Sbjct: 152 INYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT 210
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
T+ TA + APE + + D+++ GVL
Sbjct: 211 TA----TAEFAAPEIVDREPVGFYTDMWAIGVL 239
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR--TA 116
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +
Sbjct: 117 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTT 170
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 171 LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYE 203
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 18/162 (11%)
Query: 26 TEEMMQIRSEIVTLGQIRHRNILPLL-AHLARPGCH-LLVYEFMKNGSLQDILNDVSRGR 83
T + E L H N+LP+L A + P H L+ +M GSL ++L++ +
Sbjct: 48 TRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF- 106
Query: 84 RQLDWLARYRTVRGIASGLEYLHMHQAL----------VLLDHDMEARISEFGLAKVFPE 133
+D + +A G+ +LH + L V++D DM ARIS + F
Sbjct: 107 -VVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ V A PE S D++SF VLL E
Sbjct: 166 PGRMYAPAWVAPEALQKKPEDTNRRS----ADMWSFAVLLWE 203
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I E+ L +I+H N++ L +L+ E + G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 92 YRTVRGIASGLEYLHMHQ---------ALVLLDHDMEA---RISEFGLAKVFPEAHTHIT 139
++ I +G+ YLH Q ++LLD ++ +I +FGLA +
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 174
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 175 -KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 17/183 (9%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL LV++FM+ L+ I+ D S + Y
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTP-SHIKAYML 119
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ GLEYLH H L +LLD + ++++FGLAK F + V T
Sbjct: 120 M--TLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYXHQVVT 175
Query: 147 AGYIAPEYQQTLSITYM-CDIYSFGVLLAEEMSLVKWMRNVMTSENPKRAIDSKLLGNGY 205
Y APE + + D+++ G +LAE + V ++ + R ++ LG
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFET--LGTPT 233
Query: 206 EEQ 208
EEQ
Sbjct: 234 EEQ 236
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 98 IASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGY 149
+A G+E+L + + +LL +I +FGLA+ + ++ D +
Sbjct: 202 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 261
Query: 150 IAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+APE T D++SFGVLL E SL
Sbjct: 262 MAPETIFDRVYTIQSDVWSFGVLLWEIFSL 291
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G + L +S+ Q A
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQR--TA 116
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P +
Sbjct: 117 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RXX 170
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 171 LXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 203
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 14/124 (11%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VL 113
V E+ G L +SR R + AR+ I S LEYLH + ++
Sbjct: 82 FVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRDVVYRDIKLENLM 137
Query: 114 LDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
LD D +I++FGL K T GT Y+APE + D + GV++
Sbjct: 138 LDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 195
Query: 174 AEEM 177
E M
Sbjct: 196 YEMM 199
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 98 IASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGY 149
+A G+E+L + + +LL +I +FGLA+ + ++ D +
Sbjct: 207 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 266
Query: 150 IAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+APE T D++SFGVLL E SL
Sbjct: 267 MAPETIFDRVYTIQSDVWSFGVLLWEIFSL 296
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 98 IASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGY 149
+A G+E+L + + +LL +I +FGLA+ + ++ D +
Sbjct: 200 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 259
Query: 150 IAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+APE T D++SFGVLL E SL
Sbjct: 260 MAPETIFDRVYTIQSDVWSFGVLLWEIFSL 289
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 114
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +
Sbjct: 115 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTT 168
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 14/124 (11%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VL 113
V E+ G L +SR R + AR+ I S LEYLH + ++
Sbjct: 87 FVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRDVVYRDIKLENLM 142
Query: 114 LDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
LD D +I++FGL K T GT Y+APE + D + GV++
Sbjct: 143 LDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 200
Query: 174 AEEM 177
E M
Sbjct: 201 YEMM 204
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 98 IASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGY 149
I+ GL +LH + V+LD + +I++FG+ K +TT + GT Y
Sbjct: 129 ISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDY 186
Query: 150 IAPEYQQTLSITYMCDIYSFGVLLAE 175
IAPE D +++GVLL E
Sbjct: 187 IAPEIIAYQPYGKSVDWWAYGVLLYE 212
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 14/155 (9%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
+ EI ++H+NI+ L + G + E + GSL +L + +
Sbjct: 66 LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIG 125
Query: 92 YRTVRGIASGLEYLHMHQAL--------VLLD-HDMEARISEFGLAKVFPEAHTHITTSD 142
+ T + I GL+YLH +Q + VL++ + +IS+FG +K A + T
Sbjct: 126 FYT-KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTET 182
Query: 143 VVGTAGYIAPEYQQTLSITY--MCDIYSFGVLLAE 175
GT Y+APE Y DI+S G + E
Sbjct: 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIE 217
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 114
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +
Sbjct: 115 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTT 168
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 14/124 (11%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VL 113
V E+ G L +SR R + AR+ I S LEYLH + ++
Sbjct: 82 FVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRDVVYRDIKLENLM 137
Query: 114 LDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
LD D +I++FGL K T GT Y+APE + D + GV++
Sbjct: 138 LDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 195
Query: 174 AEEM 177
E M
Sbjct: 196 YEMM 199
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 98 IASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGY 149
+A G+E+L + + +LL +I +FGLA+ + ++ D +
Sbjct: 209 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 268
Query: 150 IAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+APE T D++SFGVLL E SL
Sbjct: 269 MAPETIFDRVYTIQSDVWSFGVLLWEIFSL 298
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 14/124 (11%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VL 113
V E+ G L +SR R + AR+ I S LEYLH + ++
Sbjct: 82 FVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRDVVYRDIKLENLM 137
Query: 114 LDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
LD D +I++FGL K T GT Y+APE + D + GV++
Sbjct: 138 LDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 195
Query: 174 AEEM 177
E M
Sbjct: 196 YEMM 199
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 116
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +
Sbjct: 117 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTT 170
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 203
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 14/124 (11%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VL 113
V E+ G L +SR R + AR+ I S LEYLH + ++
Sbjct: 82 FVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRDVVYRDIKLENLM 137
Query: 114 LDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
LD D +I++FGL K T GT Y+APE + D + GV++
Sbjct: 138 LDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 195
Query: 174 AEEM 177
E M
Sbjct: 196 YEMM 199
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 14/124 (11%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VL 113
V E+ G L +SR R + AR+ I S LEYLH + ++
Sbjct: 85 FVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRDVVYRDIKLENLM 140
Query: 114 LDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
LD D +I++FGL K T GT Y+APE + D + GV++
Sbjct: 141 LDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 198
Query: 174 AEEM 177
E M
Sbjct: 199 YEMM 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 14/124 (11%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--------VL 113
V E+ G L +SR R + AR+ I S LEYLH + ++
Sbjct: 82 FVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRDVVYRDIKLENLM 137
Query: 114 LDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
LD D +I++FGL K T GT Y+APE + D + GV++
Sbjct: 138 LDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 195
Query: 174 AEEM 177
E M
Sbjct: 196 YEMM 199
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 111
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +
Sbjct: 112 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTT 165
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 71 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR--TA 128
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +
Sbjct: 129 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTT 182
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 183 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 215
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 51 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 108
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +
Sbjct: 109 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTT 162
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 163 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 195
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 22/156 (14%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
++ EI+ +RH NI+ + P +V E+ G L + + + GR D A
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDE-A 117
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEAR--ISEFGLAKVFPEAHTHITT 140
R+ + + SG+ Y H Q LLD R I +FG +K + H
Sbjct: 118 RF-FFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQP 173
Query: 141 SDVVGTAGYIAPEYQQTLSITY---MCDIYSFGVLL 173
VGT YIAPE L Y + D++S GV L
Sbjct: 174 KSTVGTPAYIAPEV--LLKKEYDGKVADVWSCGVTL 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 53 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 110
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +
Sbjct: 111 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTT 164
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 165 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 197
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 15/171 (8%)
Query: 14 ATALVEADSKLLTEEMMQIRSE-IVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL 72
A +++ + L +E I SE V L ++H ++ L V +++ G L
Sbjct: 67 AVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL 126
Query: 73 QDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISE 124
+ R R L+ AR+ IAS L YLH + +LLD +++
Sbjct: 127 ---FYHLQRERCFLEPRARFYAAE-IASALGYLHSLNIVYRDLKPENILLDSQGHIVLTD 182
Query: 125 FGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
FGL K E ++ TTS GT Y+APE D + G +L E
Sbjct: 183 FGLCKENIEHNS--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYE 231
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 111
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +
Sbjct: 112 TY--ITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RAA 165
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 115
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +
Sbjct: 116 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTT 169
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 202
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 14/155 (9%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
+ EI ++H+NI+ L + G + E + GSL +L + +
Sbjct: 52 LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIG 111
Query: 92 YRTVRGIASGLEYLHMHQAL--------VLLD-HDMEARISEFGLAKVFPEAHTHITTSD 142
+ T + I GL+YLH +Q + VL++ + +IS+FG +K A + T
Sbjct: 112 FYT-KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTET 168
Query: 143 VVGTAGYIAPEYQQTLSITY--MCDIYSFGVLLAE 175
GT Y+APE Y DI+S G + E
Sbjct: 169 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIE 203
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 98/244 (40%), Gaps = 55/244 (22%)
Query: 26 TEEMMQIRSEIVTLGQI-RHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRR 84
+ E + SE+ + Q+ H NI+ LL G L++E+ G D+LN + R
Sbjct: 89 SSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYG---DLLNYLRSKRE 145
Query: 85 QL--DWLARYRTVR--------------------GIASGLEYLHMHQAL--------VLL 114
+ D + R +A G+E+L + VL+
Sbjct: 146 KFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV 205
Query: 115 DHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLA 174
H +I +FGLA+ ++ + ++APE T D++S+G+LL
Sbjct: 206 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLW 265
Query: 175 EEMSLVKWMRNVMTSENPKRAIDS---KLLGNGYE--------EQMLLVLKTACFCTLDD 223
E SL + P +D+ KL+ NG++ E++ +++++ C D
Sbjct: 266 EIFSL-------GVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQS---CWAFD 315
Query: 224 PKER 227
++R
Sbjct: 316 SRKR 319
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 22/156 (14%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
++ EI+ +RH NI+ + P +V E+ G L + + + GR D A
Sbjct: 60 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDE-A 116
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEAR--ISEFGLAKVFPEAHTHITT 140
R+ + + SG+ Y H Q LLD R I +FG +K + H
Sbjct: 117 RF-FFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQP 172
Query: 141 SDVVGTAGYIAPEYQQTLSITY---MCDIYSFGVLL 173
VGT YIAPE L Y + D++S GV L
Sbjct: 173 KSTVGTPAYIAPEV--LLKKEYDGKVADVWSCGVTL 206
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I E+ L +I+H N++ L +L+ E + G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 92 YRTVRGIASGLEYLHMHQ---------ALVLLDHDMEA---RISEFGLAKVFPEAHTHIT 139
++ I +G+ YLH Q ++LLD ++ +I +FGLA +
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 174
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 175 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR--TA 137
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +
Sbjct: 138 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTT 191
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 224
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I E+ L +I+H N++ L +L+ E + G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 92 YRTVRGIASGLEYLHMHQ---------ALVLLDHDMEA---RISEFGLAKVFPEAHTHIT 139
++ I +G+ YLH Q ++LLD ++ +I +FGLA +
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 174
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 175 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I E+ L +I+H N++ L +L+ E + G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 92 YRTVRGIASGLEYLHMHQ---------ALVLLDHDMEA---RISEFGLAKVFPEAHTHIT 139
++ I +G+ YLH Q ++LLD ++ +I +FGLA +
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 174
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 175 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 22/129 (17%)
Query: 59 CHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVLLDHDM 118
C L+V E + G L + D RG + ++ I ++YLH ++ + D+
Sbjct: 87 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDV 141
Query: 119 EA--------------RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMC 164
+ ++++FG AK E +H + ++ T Y+APE C
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSC 198
Query: 165 DIYSFGVLL 173
D++S GV++
Sbjct: 199 DMWSLGVIM 207
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 18/154 (11%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 112
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + H + D
Sbjct: 113 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRD 165
Query: 143 VV-GTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 166 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 199
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I E+ L +I+H N++ L +L+ E + G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 92 YRTVRGIASGLEYLHMHQ---------ALVLLDHDMEA---RISEFGLAKVFPEAHTHIT 139
++ I +G+ YLH Q ++LLD ++ +I +FGLA +
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 174
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 175 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 111
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +
Sbjct: 112 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTX 165
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I E+ L +I+H N++ L +L+ E + G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 92 YRTVRGIASGLEYLHMHQ---------ALVLLDHDMEA---RISEFGLAKVFPEAHTHIT 139
++ I +G+ YLH Q ++LLD ++ +I +FGLA +
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 174
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 175 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 52/125 (41%), Gaps = 15/125 (12%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALV--------- 112
V E+ G L +SR R + AR+ I S L+YLH + +V
Sbjct: 225 FVMEYANGGEL---FFHLSRERVFSEDRARFYGAE-IVSALDYLHSEKNVVYRDLKLENL 280
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
+LD D +I++FGL K T GT Y+APE + D + GV+
Sbjct: 281 MLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 338
Query: 173 LAEEM 177
+ E M
Sbjct: 339 MYEMM 343
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I E+ L +I+H N++ L +L+ E + G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 92 YRTVRGIASGLEYLHMHQ---------ALVLLDHDMEA---RISEFGLAKVFPEAHTHIT 139
++ I +G+ YLH Q ++LLD ++ +I +FGLA +
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 174
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 175 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRG-RRQLDWLA 90
+ +EI L +I+H NI+ L + LV + + G L D + + RG + D
Sbjct: 53 LENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRI--LERGVYTEKD--- 107
Query: 91 RYRTVRGIASGLEYLHMH---------QALVLLDHDMEARI--SEFGLAKVFPEAHTHIT 139
++ + S ++YLH + + L+ L + ++I ++FGL+K+ E + ++
Sbjct: 108 ASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMS 165
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
T+ GT GY+APE + D +S GV+
Sbjct: 166 TA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVI 196
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 52/125 (41%), Gaps = 15/125 (12%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALV--------- 112
V E+ G L +SR R + AR+ I S L+YLH + +V
Sbjct: 228 FVMEYANGGEL---FFHLSRERVFSEDRARFYGAE-IVSALDYLHSEKNVVYRDLKLENL 283
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
+LD D +I++FGL K T GT Y+APE + D + GV+
Sbjct: 284 MLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 341
Query: 173 LAEEM 177
+ E M
Sbjct: 342 MYEMM 346
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I E+ L +I+H N++ L +L+ E + G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 92 YRTVRGIASGLEYLHMHQ---------ALVLLDHDMEA---RISEFGLAKVFPEAHTHIT 139
++ I +G+ YLH Q ++LLD ++ +I +FGLA +
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 174
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 175 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 111
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +
Sbjct: 112 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RAA 165
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I E+ L +I+H N++ L +L+ E + G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 92 YRTVRGIASGLEYLHMHQ---------ALVLLDHDMEA---RISEFGLAKVFPEAHTHIT 139
++ I +G+ YLH Q ++LLD ++ +I +FGLA +
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 174
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 175 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I E+ L +I+H N++ L +L+ E + G L D L + + L
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 115
Query: 92 YRTVRGIASGLEYLHMHQ---------ALVLLDHDMEA---RISEFGLAKVFPEAHTHIT 139
++ I +G+ YLH Q ++LLD ++ +I +FGLA +
Sbjct: 116 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 173
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 174 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 205
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I E+ L +I+H N++ L +L+ E + G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 92 YRTVRGIASGLEYLHMHQ---------ALVLLDHDMEA---RISEFGLAKVFPEAHTHIT 139
++ I +G+ YLH Q ++LLD ++ +I +FGLA +
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 174
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 175 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 114
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I+ FG + P + +
Sbjct: 115 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR----RTT 168
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 52/125 (41%), Gaps = 15/125 (12%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALV--------- 112
V E+ G L +SR R + AR+ I S L+YLH + +V
Sbjct: 87 FVMEYANGGEL---FFHLSRERVFSEDRARFYGAE-IVSALDYLHSEKNVVYRDLKLENL 142
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
+LD D +I++FGL K T GT Y+APE + D + GV+
Sbjct: 143 MLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 200
Query: 173 LAEEM 177
+ E M
Sbjct: 201 MYEMM 205
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 113
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I+ FG + P + +
Sbjct: 114 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR----RTT 167
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 200
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 52/125 (41%), Gaps = 15/125 (12%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALV--------- 112
V E+ G L +SR R + AR+ I S L+YLH + +V
Sbjct: 86 FVMEYANGGEL---FFHLSRERVFSEDRARFYGAE-IVSALDYLHSEKNVVYRDLKLENL 141
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
+LD D +I++FGL K T GT Y+APE + D + GV+
Sbjct: 142 MLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 199
Query: 173 LAEEM 177
+ E M
Sbjct: 200 MYEMM 204
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 114
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +
Sbjct: 115 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RAA 168
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 52/125 (41%), Gaps = 15/125 (12%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALV--------- 112
V E+ G L +SR R + AR+ I S L+YLH + +V
Sbjct: 85 FVMEYANGGEL---FFHLSRERVFSEDRARFYGAE-IVSALDYLHSEKNVVYRDLKLENL 140
Query: 113 LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
+LD D +I++FGL K T GT Y+APE + D + GV+
Sbjct: 141 MLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 198
Query: 173 LAEEM 177
+ E M
Sbjct: 199 MYEMM 203
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 65 EFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH--MHQAL----VLLDHDM 118
E M GSL +L + R ++ +RG+A L H MH+ + +L++
Sbjct: 94 EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAY-LREKHQIMHRDVKPSNILVNSRG 152
Query: 119 EARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
E ++ +FG++ ++ + VGT Y+APE Q + DI+S G+ L E
Sbjct: 153 EIKLCDFGVSGQLIDS----MANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVE 205
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I E+ L +I+H N++ L +L+ E + G L D L + + L
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 115
Query: 92 YRTVRGIASGLEYLHMHQ---------ALVLLDHDMEA---RISEFGLAKVFPEAHTHIT 139
++ I +G+ YLH Q ++LLD ++ +I +FGLA +
Sbjct: 116 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 173
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 174 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 205
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 27/170 (15%)
Query: 28 EMMQIRS---EIVTLGQIRHRNILPLLAHLARP-GCHLLVYEFMKNGSLQDILNDVSRGR 83
EM Q+ + E + + + H N+L L+ + P G ++ +M +G L + R
Sbjct: 62 EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNP 121
Query: 84 RQLDWLARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLAKVF---- 131
D ++ V A G+EYL +H+ L +LD ++++FGLA+
Sbjct: 122 TVKDLISFGLQV---ARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178
Query: 132 ---PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ H H + A E QT T D++SFGVLL E ++
Sbjct: 179 YYSVQQHRHARLP-----VKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 22/187 (11%)
Query: 15 TALVEADSKLLTEEMMQIRSEIVTLGQIRHR----NILPLLAHLARPGCHLLVYEFMKNG 70
+ LV A + E IR++I+ Q+ H I+ G + E M G
Sbjct: 33 SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 92
Query: 71 SLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH-----MHQAL----VLLDHDMEAR 121
SL +L R Q+ L + + GL YL MH+ + +L++ E +
Sbjct: 93 SLDQVLKKAGRIPEQI--LGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 148
Query: 122 ISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
+ +FG++ + ++ VGT Y++PE Q + DI+S G+ L EM++ +
Sbjct: 149 LCDFGVSGQLIDE----MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV-EMAVGR 203
Query: 182 WMRNVMT 188
+ R M
Sbjct: 204 YPRPPMA 210
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 112
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P + +
Sbjct: 113 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR----RTT 166
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 167 LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 199
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I E+ L +I+H N++ L +L+ E + G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 92 YRTVRGIASGLEYLHMHQ---------ALVLLDHDMEA---RISEFGLAKVFPEAHTHIT 139
++ I +G+ YLH Q ++LLD ++ +I +FGLA +
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 174
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 175 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 113
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P +
Sbjct: 114 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RXX 167
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 200
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 37/191 (19%)
Query: 23 KLLTEEM---MQ--IRSEIVTLGQIRHRNILPLLAHLA--RPGCHLLVYEFMKNGSLQDI 75
K+L EE MQ + E + + + NI+ LL A +P C L++E+M G L +
Sbjct: 83 KMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC--LLFEYMAYGDLNEF 140
Query: 76 LNDV--------------------SRGRRQLDWLARYRTVRGIASGLEYL----HMHQAL 111
L + S G L + R +A+G+ YL +H+ L
Sbjct: 141 LRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL 200
Query: 112 V----LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIY 167
L+ +M +I++FGL++ A + + ++ PE T D++
Sbjct: 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVW 260
Query: 168 SFGVLLAEEMS 178
++GV+L E S
Sbjct: 261 AYGVVLWEIFS 271
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 13/129 (10%)
Query: 55 ARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQA 110
++ C + EF G+L+ + R +LD + I G++Y+H +H+
Sbjct: 104 SKTKCLFIQMEFCDKGTLEQWIE--KRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRD 161
Query: 111 L----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDI 166
L + L + +I +FGL + GT Y++PE + D+
Sbjct: 162 LKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSK---GTLRYMSPEQISSQDYGKEVDL 218
Query: 167 YSFGVLLAE 175
Y+ G++LAE
Sbjct: 219 YALGLILAE 227
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 20/162 (12%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY-- 92
E + + ++ H+NI+ + + ++ E M G L+ L + Q LA
Sbjct: 84 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 93 -RTVRGIASGLEYLHMHQALVLLDHDMEAR--------------ISEFGLAKVFPEAHTH 137
R IA G +YL + + D+ AR I +FG+A+ A +
Sbjct: 144 LHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 200
Query: 138 ITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ ++ PE T D +SFGVLL E SL
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 242
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 114
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P +
Sbjct: 115 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RXX 168
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 33/164 (20%)
Query: 35 EIVTLGQIRHRNILPL------LAHLARPGCHLLVYEFMKNGSLQDILNDVSR--GRRQL 86
EI + ++ H N++ L LA LL E+ + G L+ LN G ++
Sbjct: 62 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE- 120
Query: 87 DWLARYRTV-RGIASGLEYLHMHQALVLLDHDMEA--------------RISEFGLAKVF 131
RT+ I+S L YLH ++ ++ D++ +I + G AK
Sbjct: 121 ---GPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL 174
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ ++ VGT Y+APE + T D +SFG L E
Sbjct: 175 DQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 215
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 22/156 (14%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
++ EI+ +RH NI+ + P +V E+ G L + + + GR D A
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDE-A 117
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEAR--ISEFGLAKVFPEAHTHITT 140
R+ + + SG+ Y H Q LLD R I FG +K + H
Sbjct: 118 RF-FFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQP 173
Query: 141 SDVVGTAGYIAPEYQQTLSITY---MCDIYSFGVLL 173
VGT YIAPE L Y + D++S GV L
Sbjct: 174 KSTVGTPAYIAPEV--LLKKEYDGKVADVWSCGVTL 207
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
I E+ L +I+H N++ L +L+ E + G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAE----KESLTEEEA 116
Query: 92 YRTVRGIASGLEYLHMHQ---------ALVLLDHDMEA---RISEFGLAKVFPEAHTHIT 139
++ I +G+ YLH Q ++LLD ++ +I +FGLA +
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF-- 174
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
++ GT ++APE + D++S GV+
Sbjct: 175 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 33/164 (20%)
Query: 35 EIVTLGQIRHRNILPL------LAHLARPGCHLLVYEFMKNGSLQDILNDVSR--GRRQL 86
EI + ++ H N++ L LA LL E+ + G L+ LN G ++
Sbjct: 63 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE- 121
Query: 87 DWLARYRTV-RGIASGLEYLHMHQALVLLDHDMEA--------------RISEFGLAKVF 131
RT+ I+S L YLH ++ ++ D++ +I + G AK
Sbjct: 122 ---GPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL 175
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ ++ VGT Y+APE + T D +SFG L E
Sbjct: 176 DQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 216
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 20/162 (12%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY-- 92
E + + ++ H+NI+ + + ++ E M G L+ L + Q LA
Sbjct: 98 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 93 -RTVRGIASGLEYLHMHQALVLLDHDMEAR--------------ISEFGLAKVFPEAHTH 137
R IA G +YL + + D+ AR I +FG+A+ A +
Sbjct: 158 LHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 138 ITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ ++ PE T D +SFGVLL E SL
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 256
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R E+ +RH NIL L + L+ E+ G++ L +S+ Q A
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--A 111
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y + +A+ L Y H + + +LL E +I++FG + P +
Sbjct: 112 TY--ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RXX 165
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + D++S GVL E
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY-- 92
E + + + H+NI+ + + ++ E M G L+ L + Q LA
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 93 -RTVRGIASGLEYLHMHQALVLLDHDMEAR--------------ISEFGLAKVFPEAHTH 137
R IA G +YL + + D+ AR I +FG+A+ A +
Sbjct: 143 LHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 199
Query: 138 ITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ ++ PE T D +SFGVLL E SL
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 241
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY-- 92
E + + + H+NI+ + + ++ E M G L+ L + Q LA
Sbjct: 100 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 159
Query: 93 -RTVRGIASGLEYLHMHQALVLLDHDMEAR--------------ISEFGLAKVFPEAHTH 137
R IA G +YL + + D+ AR I +FG+A+ A +
Sbjct: 160 LHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 216
Query: 138 ITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ ++ PE T D +SFGVLL E SL
Sbjct: 217 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 258
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY-- 92
E + + + H+NI+ + + ++ E M G L+ L + Q LA
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 93 -RTVRGIASGLEYLHMHQALVLLDHDMEAR--------------ISEFGLAKVFPEAHTH 137
R IA G +YL + + D+ AR I +FG+A+ A +
Sbjct: 143 LHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 199
Query: 138 ITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ ++ PE T D +SFGVLL E SL
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 241
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 43 RHRNILPLLAHLARPGCHL-LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIAS 100
+H NI+ L + G H+ LV E M+ G L D IL R+ ++ + I
Sbjct: 79 QHPNII-TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFV-----LHTIGK 132
Query: 101 GLEYLH----MHQAL-----VLLDHDMEA---RISEFGLAKVFPEAHTHITTSDVVGTAG 148
+EYLH +H+ L + +D RI +FG AK + + T TA
Sbjct: 133 TVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--CYTAN 190
Query: 149 YIAPEYQQTLSITYMCDIYSFGVLL 173
++APE + CDI+S G+LL
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILL 215
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 43 RHRNILPLLAHLARPGCHL-LVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIAS 100
+H NI+ L + G H+ LV E M+ G L D IL R+ ++ + I
Sbjct: 79 QHPNII-TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFV-----LHTIGK 132
Query: 101 GLEYLH----MHQAL-----VLLDHDMEA---RISEFGLAKVFPEAHTHITTSDVVGTAG 148
+EYLH +H+ L + +D RI +FG AK + + T TA
Sbjct: 133 TVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--CYTAN 190
Query: 149 YIAPEYQQTLSITYMCDIYSFGVLL 173
++APE + CDI+S G+LL
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILL 215
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY-- 92
E + + + H+NI+ + + ++ E M G L+ L + Q LA
Sbjct: 110 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 169
Query: 93 -RTVRGIASGLEYLHMHQALVLLDHDMEAR--------------ISEFGLAKVFPEAHTH 137
R IA G +YL + + D+ AR I +FG+A+ A +
Sbjct: 170 LHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 226
Query: 138 ITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ ++ PE T D +SFGVLL E SL
Sbjct: 227 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 268
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY-- 92
E + + + H+NI+ + + ++ E M G L+ L + Q LA
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 93 -RTVRGIASGLEYLHMHQALVLLDHDMEAR--------------ISEFGLAKVFPEAHTH 137
R IA G +YL + + D+ AR I +FG+A+ A +
Sbjct: 144 LHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 200
Query: 138 ITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ ++ PE T D +SFGVLL E SL
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 242
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY-- 92
E + + + H+NI+ + + ++ E M G L+ L + Q LA
Sbjct: 75 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 134
Query: 93 -RTVRGIASGLEYLHMHQALVLLDHDMEAR--------------ISEFGLAKVFPEAHTH 137
R IA G +YL + + D+ AR I +FG+A+ A +
Sbjct: 135 LHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 191
Query: 138 ITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ ++ PE T D +SFGVLL E SL
Sbjct: 192 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 233
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 22/129 (17%)
Query: 59 CHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVLLDHDM 118
C L+V E + G L + D RG + ++ I ++YLH ++ + D+
Sbjct: 139 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDV 193
Query: 119 EA--------------RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMC 164
+ ++++FG AK E +H + + T Y+APE C
Sbjct: 194 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 250
Query: 165 DIYSFGVLL 173
D++S GV++
Sbjct: 251 DMWSLGVIM 259
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 22/129 (17%)
Query: 59 CHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVLLDHDM 118
C L+V E + G L + D RG + ++ I ++YLH ++ + D+
Sbjct: 133 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDV 187
Query: 119 EA--------------RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMC 164
+ ++++FG AK E +H + + T Y+APE C
Sbjct: 188 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 165 DIYSFGVLL 173
D++S GV++
Sbjct: 245 DMWSLGVIM 253
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY-- 92
E + + + H+NI+ + + ++ E M G L+ L + Q LA
Sbjct: 90 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 149
Query: 93 -RTVRGIASGLEYLHMHQALVLLDHDMEAR--------------ISEFGLAKVFPEAHTH 137
R IA G +YL + + D+ AR I +FG+A+ A +
Sbjct: 150 LHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 206
Query: 138 ITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ ++ PE T D +SFGVLL E SL
Sbjct: 207 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 248
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 22/129 (17%)
Query: 59 CHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVLLDHDM 118
C L+V E + G L + D RG + ++ I ++YLH ++ + D+
Sbjct: 89 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDV 143
Query: 119 EA--------------RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMC 164
+ ++++FG AK E +H + + T Y+APE C
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 165 DIYSFGVLL 173
D++S GV++
Sbjct: 201 DMWSLGVIM 209
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 22/129 (17%)
Query: 59 CHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVLLDHDM 118
C L+V E + G L + D RG + ++ I ++YLH ++ + D+
Sbjct: 88 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDV 142
Query: 119 EA--------------RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMC 164
+ ++++FG AK E +H + + T Y+APE C
Sbjct: 143 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 199
Query: 165 DIYSFGVLL 173
D++S GV++
Sbjct: 200 DMWSLGVIM 208
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 22/129 (17%)
Query: 59 CHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVLLDHDM 118
C L+V E + G L + D RG + ++ I ++YLH ++ + D+
Sbjct: 87 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDV 141
Query: 119 EA--------------RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMC 164
+ ++++FG AK E +H + + T Y+APE C
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 198
Query: 165 DIYSFGVLL 173
D++S GV++
Sbjct: 199 DMWSLGVIM 207
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 22/156 (14%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
++ EI+ +RH NI+ + P ++ E+ G L + + + GR D A
Sbjct: 62 NVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI--CNAGRFSEDE-A 118
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEAR--ISEFGLAKVFPEAHTHITT 140
R+ + + SG+ Y H Q LLD R I +FG +K + H
Sbjct: 119 RF-FFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQP 174
Query: 141 SDVVGTAGYIAPEYQQTLSITY---MCDIYSFGVLL 173
VGT YIAPE L Y + D++S GV L
Sbjct: 175 KSTVGTPAYIAPEV--LLRQEYDGKIADVWSCGVTL 208
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 22/129 (17%)
Query: 59 CHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVLLDHDM 118
C L+V E + G L + D RG + ++ I ++YLH ++ + D+
Sbjct: 94 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDV 148
Query: 119 EA--------------RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMC 164
+ ++++FG AK E +H + + T Y+APE C
Sbjct: 149 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 205
Query: 165 DIYSFGVLL 173
D++S GV++
Sbjct: 206 DMWSLGVIM 214
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 14/131 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
++ EI L ++ H NI+ +L G LV E K+GS D+ + R R + LA
Sbjct: 75 KVTLEIAILSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLA 132
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
Y R + S + YL + + +++ D ++ +FG A T
Sbjct: 133 SY-IFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT--- 188
Query: 143 VVGTAGYIAPE 153
GT Y APE
Sbjct: 189 FCGTIEYCAPE 199
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 22/129 (17%)
Query: 59 CHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVLLDHDM 118
C L+V E + G L + D RG + ++ I ++YLH ++ + D+
Sbjct: 93 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDV 147
Query: 119 EA--------------RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMC 164
+ ++++FG AK E +H + + T Y+APE C
Sbjct: 148 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 204
Query: 165 DIYSFGVLL 173
D++S GV++
Sbjct: 205 DMWSLGVIM 213
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 22/129 (17%)
Query: 59 CHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVLLDHDM 118
C L+V E + G L + D RG + ++ I ++YLH ++ + D+
Sbjct: 95 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDV 149
Query: 119 EA--------------RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMC 164
+ ++++FG AK E +H + + T Y+APE C
Sbjct: 150 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 206
Query: 165 DIYSFGVLL 173
D++S GV++
Sbjct: 207 DMWSLGVIM 215
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 22/129 (17%)
Query: 59 CHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVLLDHDM 118
C L+V E + G L + D RG + ++ I ++YLH ++ + D+
Sbjct: 103 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDV 157
Query: 119 EA--------------RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMC 164
+ ++++FG AK E +H + + T Y+APE C
Sbjct: 158 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 214
Query: 165 DIYSFGVLL 173
D++S GV++
Sbjct: 215 DMWSLGVIM 223
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY-- 92
E + + + H+NI+ + + ++ E M G L+ L + Q LA
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 93 -RTVRGIASGLEYLHMHQALVLLDHDMEAR--------------ISEFGLAKVFPEAHTH 137
R IA G +YL + + D+ AR I +FG+A+ A +
Sbjct: 158 LHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 138 ITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ ++ PE T D +SFGVLL E SL
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 256
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 22/129 (17%)
Query: 59 CHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVLLDHDM 118
C L+V E + G L + D RG + ++ I ++YLH ++ + D+
Sbjct: 89 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDV 143
Query: 119 EA--------------RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMC 164
+ ++++FG AK E +H + + T Y+APE C
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 165 DIYSFGVLL 173
D++S GV++
Sbjct: 201 DMWSLGVIM 209
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY-- 92
E + + + H+NI+ + + ++ E M G L+ L + Q LA
Sbjct: 101 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 160
Query: 93 -RTVRGIASGLEYLHMHQALVLLDHDMEAR--------------ISEFGLAKVFPEAHTH 137
R IA G +YL + + D+ AR I +FG+A+ A +
Sbjct: 161 LHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 217
Query: 138 ITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ ++ PE T D +SFGVLL E SL
Sbjct: 218 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 259
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 21/174 (12%)
Query: 15 TALVEADSKLLTEEMMQIRSEIVTLGQIRHR----NILPLLAHLARPGCHLLVYEFMKNG 70
+ LV A + E IR++I+ Q+ H I+ G + E M G
Sbjct: 49 SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 108
Query: 71 SLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH-----MHQAL----VLLDHDMEAR 121
SL +L R Q+ L + + GL YL MH+ + +L++ E +
Sbjct: 109 SLDQVLKKAGRIPEQI--LGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 164
Query: 122 ISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +FG++ ++ + VGT Y++PE Q + DI+S G+ L E
Sbjct: 165 LCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 214
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+D ++ + L + Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSY-- 108
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 166
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 167 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 196
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY-- 92
E + + + H+NI+ + + ++ E M G L+ L + Q LA
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 93 -RTVRGIASGLEYLHMHQALVLLDHDMEAR--------------ISEFGLAKVFPEAHTH 137
R IA G +YL + + D+ AR I +FG+A+ A +
Sbjct: 158 LHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 138 ITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ ++ PE T D +SFGVLL E SL
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 256
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY-- 92
E + + + H+NI+ + + ++ E M G L+ L + Q LA
Sbjct: 124 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 183
Query: 93 -RTVRGIASGLEYLHMHQALVLLDHDMEAR--------------ISEFGLAKVFPEAHTH 137
R IA G +YL + + D+ AR I +FG+A+ A +
Sbjct: 184 LHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 240
Query: 138 ITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ ++ PE T D +SFGVLL E SL
Sbjct: 241 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 282
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARY-- 92
E + + + H+NI+ + + ++ E M G L+ L + Q LA
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 93 -RTVRGIASGLEYLHMHQALVLLDHDMEAR--------------ISEFGLAKVFPEAHTH 137
R IA G +YL + + D+ AR I +FG+A+ A +
Sbjct: 144 LHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYY 200
Query: 138 ITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ ++ PE T D +SFGVLL E SL
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 242
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 14/156 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + + H ++ L + ++ E+M NG L + L ++ R R Q L
Sbjct: 49 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLE--M 105
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAK-VFPEAHTHITTSDVVG 145
+ + +EYL Q L L++ ++S+FGL++ V + +T S
Sbjct: 106 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-- 163
Query: 146 TAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
+ PE + DI++FGVL+ E SL K
Sbjct: 164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 199
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 14/156 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + + H ++ L + ++ E+M NG L + L ++ R R Q L
Sbjct: 53 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLE--M 109
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAK-VFPEAHTHITTSDVVG 145
+ + +EYL Q L L++ ++S+FGL++ V + +T S
Sbjct: 110 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-- 167
Query: 146 TAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
+ PE + DI++FGVL+ E SL K
Sbjct: 168 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ + L+D ++ + L + Y
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSY-- 111
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 169
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 170 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 199
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 108
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F T +VV T
Sbjct: 109 LFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-T 166
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 167 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 196
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 98 IASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGY 149
+A G+E+L + + +LL + +I +FGLA+ + ++ D +
Sbjct: 208 VARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKW 267
Query: 150 IAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+APE + D++S+GVLL E SL
Sbjct: 268 MAPESIFDKIYSTKSDVWSYGVLLWEIFSL 297
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 21/174 (12%)
Query: 15 TALVEADSKLLTEEMMQIRSEIVTLGQIRHR----NILPLLAHLARPGCHLLVYEFMKNG 70
+ LV A + E IR++I+ Q+ H I+ G + E M G
Sbjct: 30 SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 71 SLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH-----MHQAL----VLLDHDMEAR 121
SL +L R Q+ L + + GL YL MH+ + +L++ E +
Sbjct: 90 SLDQVLKKAGRIPEQI--LGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145
Query: 122 ISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +FG++ ++ + VGT Y++PE Q + DI+S G+ L E
Sbjct: 146 LCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 21/174 (12%)
Query: 15 TALVEADSKLLTEEMMQIRSEIVTLGQIRHR----NILPLLAHLARPGCHLLVYEFMKNG 70
+ LV A + E IR++I+ Q+ H I+ G + E M G
Sbjct: 30 SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 71 SLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH-----MHQAL----VLLDHDMEAR 121
SL +L R Q+ L + + GL YL MH+ + +L++ E +
Sbjct: 90 SLDQVLKKAGRIPEQI--LGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145
Query: 122 ISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +FG++ ++ + VGT Y++PE Q + DI+S G+ L E
Sbjct: 146 LCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ + L+D ++ + L + Y
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSY-- 110
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 168
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 169 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 198
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 13/129 (10%)
Query: 55 ARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL--- 111
++ C + EF G+L+ + + RG + LD + I G++Y+H + +
Sbjct: 90 SKTKCLFIQMEFCDKGTLEQWI-EKRRGEK-LDKVLALELFEQITKGVDYIHSKKLINRD 147
Query: 112 -----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDI 166
+ L + +I +FGL + GT Y++PE + D+
Sbjct: 148 LKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK---GTLRYMSPEQISSQDYGKEVDL 204
Query: 167 YSFGVLLAE 175
Y+ G++LAE
Sbjct: 205 YALGLILAE 213
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 21/174 (12%)
Query: 15 TALVEADSKLLTEEMMQIRSEIVTLGQIRHR----NILPLLAHLARPGCHLLVYEFMKNG 70
+ LV A + E IR++I+ Q+ H I+ G + E M G
Sbjct: 30 SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 71 SLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH-----MHQAL----VLLDHDMEAR 121
SL +L R Q+ L + + GL YL MH+ + +L++ E +
Sbjct: 90 SLDQVLKKAGRIPEQI--LGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145
Query: 122 ISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +FG++ ++ + VGT Y++PE Q + DI+S G+ L E
Sbjct: 146 LCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 21/157 (13%)
Query: 32 IRSEIVTLGQIRHR----NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLD 87
IR++I+ Q+ H I+ G + E M GSL +L R Q+
Sbjct: 74 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI- 132
Query: 88 WLARYRTVRGIASGLEYLH-----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHI 138
L + + GL YL MH+ + +L++ E ++ +FG++ ++
Sbjct: 133 -LGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 185
Query: 139 TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ VGT Y++PE Q + DI+S G+ L E
Sbjct: 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 222
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 14/150 (9%)
Query: 41 QIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIAS 100
+ H ++ L + ++ E+M NG L + L ++ R R Q L + +
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLE--MCKDVCE 116
Query: 101 GLEYLHMHQAL--------VLLDHDMEARISEFGLAK-VFPEAHTHITTSDVVGTAGYIA 151
+EYL Q L L++ ++S+FGL++ V + +T S +
Sbjct: 117 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSP 174
Query: 152 PEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
PE + DI++FGVL+ E SL K
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 204
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 14/150 (9%)
Query: 41 QIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIAS 100
+ H ++ L + ++ E+M NG L + L ++ R R Q L + +
Sbjct: 66 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLE--MCKDVCE 122
Query: 101 GLEYLHMHQAL--------VLLDHDMEARISEFGLAK-VFPEAHTHITTSDVVGTAGYIA 151
+EYL Q L L++ ++S+FGL++ V + +T S +
Sbjct: 123 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSP 180
Query: 152 PEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
PE + DI++FGVL+ E SL K
Sbjct: 181 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 210
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 21/174 (12%)
Query: 15 TALVEADSKLLTEEMMQIRSEIVTLGQIRHR----NILPLLAHLARPGCHLLVYEFMKNG 70
+ LV A + E IR++I+ Q+ H I+ G + E M G
Sbjct: 30 SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 71 SLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH-----MHQAL----VLLDHDMEAR 121
SL +L R Q+ L + + GL YL MH+ + +L++ E +
Sbjct: 90 SLDQVLKKAGRIPEQI--LGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145
Query: 122 ISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +FG++ ++ + VGT Y++PE Q + DI+S G+ L E
Sbjct: 146 LCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 22/130 (16%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRG----IASGLEYLH----MHQALV- 112
LV+EFM++G L D L RG L T+ G + G+ YL +H+ L
Sbjct: 82 LVFEFMEHGCLSDYLR-TQRG------LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 134
Query: 113 ---LLDHDMEARISEFGLAK-VFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
L+ + ++S+FG+ + V + +T T + + +PE + D++S
Sbjct: 135 RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSKSDVWS 192
Query: 169 FGVLLAEEMS 178
FGVL+ E S
Sbjct: 193 FGVLMWEVFS 202
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 24/135 (17%)
Query: 57 PGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRG----IASGLEYLH----MH 108
P C LV+EFM++G L D L RG L T+ G + G+ YL +H
Sbjct: 74 PIC--LVFEFMEHGCLSDYLR-TQRG------LFAAETLLGMCLDVCEGMAYLEEACVIH 124
Query: 109 QALV----LLDHDMEARISEFGLAK-VFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYM 163
+ L L+ + ++S+FG+ + V + +T T + + +PE +
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSK 182
Query: 164 CDIYSFGVLLAEEMS 178
D++SFGVL+ E S
Sbjct: 183 SDVWSFGVLMWEVFS 197
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 21/174 (12%)
Query: 15 TALVEADSKLLTEEMMQIRSEIVTLGQIRHR----NILPLLAHLARPGCHLLVYEFMKNG 70
+ LV A + E IR++I+ Q+ H I+ G + E M G
Sbjct: 30 SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 71 SLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH-----MHQAL----VLLDHDMEAR 121
SL +L R Q+ L + + GL YL MH+ + +L++ E +
Sbjct: 90 SLDQVLKKAGRIPEQI--LGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 145
Query: 122 ISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ +FG++ ++ + VGT Y++PE Q + DI+S G+ L E
Sbjct: 146 LCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 14/150 (9%)
Query: 41 QIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIAS 100
+ H ++ L + ++ E+M NG L + L ++ R R Q L + +
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLE--MCKDVCE 131
Query: 101 GLEYLHMHQAL--------VLLDHDMEARISEFGLAK-VFPEAHTHITTSDVVGTAGYIA 151
+EYL Q L L++ ++S+FGL++ V + +T S +
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSP 189
Query: 152 PEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
PE + DI++FGVL+ E SL K
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 219
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 109
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F T +VV T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-T 167
Query: 147 AGYIAPEYQQTLSITYMC---DIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 168 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 197
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 108
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F T +VV T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-T 166
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 167 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 196
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 108
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F T +VV T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-T 166
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 167 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 196
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 108
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F T +VV T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-T 166
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 167 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 196
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 107
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F T +VV T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-T 165
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 166 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 195
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 115
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F T +VV T
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-T 173
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 174 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 203
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 107
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F T +VV T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-T 165
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 166 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 195
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 108
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F T +VV T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-T 166
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 167 LWYRAPEI--LLGXKYYSTAVDIWSLGCIFAE 196
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 115
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F T +VV T
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-T 173
Query: 147 AGYIAPEYQQTLSITYMC---DIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 174 LWYRAPEI--LLGXKYYSTAVDIWSLGCIFAE 203
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 22/130 (16%)
Query: 62 LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRG----IASGLEYLH----MHQALV- 112
LV+EFM++G L D L RG L T+ G + G+ YL +H+ L
Sbjct: 99 LVFEFMEHGCLSDYLR-TQRG------LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 151
Query: 113 ---LLDHDMEARISEFGLAK-VFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
L+ + ++S+FG+ + V + +T T + + +PE + D++S
Sbjct: 152 RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSKSDVWS 209
Query: 169 FGVLLAEEMS 178
FGVL+ E S
Sbjct: 210 FGVLMWEVFS 219
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 107
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F T +VV T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-T 165
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 166 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 195
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 112
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F T +VV T
Sbjct: 113 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-T 170
Query: 147 AGYIAPEYQQTLSITYMC---DIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 171 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 200
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 24/135 (17%)
Query: 57 PGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRG----IASGLEYLH----MH 108
P C LV+EFM++G L D L RG L T+ G + G+ YL +H
Sbjct: 76 PIC--LVFEFMEHGCLSDYLR-TQRG------LFAAETLLGMCLDVCEGMAYLEEASVIH 126
Query: 109 QALV----LLDHDMEARISEFGLAK-VFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYM 163
+ L L+ + ++S+FG+ + V + +T T + + +PE +
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSK 184
Query: 164 CDIYSFGVLLAEEMS 178
D++SFGVL+ E S
Sbjct: 185 SDVWSFGVLMWEVFS 199
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 23/185 (12%)
Query: 4 IRKIVQ--PPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+R+ V+ P + A + KL + ++ E ++H NI+ L ++ G H
Sbjct: 47 VRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHY 106
Query: 62 LVYEFMKNGSL-QDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMH---------QAL 111
LV++ + G L +DI+ R + I + ++H H + L
Sbjct: 107 LVFDLVTGGELFEDIV-----AREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENL 161
Query: 112 VLLDHDMEA--RISEFGLA-KVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
+L A ++++FGLA +V E GT GY++PE + DI++
Sbjct: 162 LLASKCKGAAVKLADFGLAIEVQGEQQAWF---GFAGTPGYLSPEVLRKDPYGKPVDIWA 218
Query: 169 FGVLL 173
GV+L
Sbjct: 219 CGVIL 223
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 20/149 (13%)
Query: 18 VEADSKLLTEEMMQIR----SEIVTLGQIR-HRNILPLLAHLARPGCHLLVYEFMKNGSL 72
V EE+ ++R E+ L ++ H NI+ L LV++ MK G L
Sbjct: 39 VTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 98
Query: 73 QDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISE 124
D L + + L + +R + + LH +H+ L +LLD DM ++++
Sbjct: 99 FDYLTE----KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTD 154
Query: 125 FGLAKVFPEAHTHITTSDVVGTAGYIAPE 153
FG + +V GT Y+APE
Sbjct: 155 FGFSCQLDPGE---KLREVCGTPSYLAPE 180
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 24/135 (17%)
Query: 57 PGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRG----IASGLEYLH----MH 108
P C LV+EFM++G L D L RG L T+ G + G+ YL +H
Sbjct: 76 PIC--LVFEFMEHGCLSDYLR-TQRG------LFAAETLLGMCLDVCEGMAYLEEACVIH 126
Query: 109 QALV----LLDHDMEARISEFGLAK-VFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYM 163
+ L L+ + ++S+FG+ + V + +T T + + +PE +
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSK 184
Query: 164 CDIYSFGVLLAEEMS 178
D++SFGVL+ E S
Sbjct: 185 SDVWSFGVLMWEVFS 199
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 14/156 (8%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E + + H ++ L + ++ E+M NG L + L ++ R R Q L
Sbjct: 54 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLE--M 110
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAK-VFPEAHTHITTSDVVG 145
+ + +EYL Q L L++ ++S+FGL++ V + +T S
Sbjct: 111 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKF-- 168
Query: 146 TAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
+ PE + DI++FGVL+ E SL K
Sbjct: 169 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 204
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 21/157 (13%)
Query: 32 IRSEIVTLGQIRHRNILPLL----AHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLD 87
IR++I+ Q+ H P + G + E M GSL +L R Q+
Sbjct: 109 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI- 167
Query: 88 WLARYRTVRGIASGLEYLH-----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHI 138
L + + GL YL MH+ + +L++ E ++ +FG++ ++
Sbjct: 168 -LGKVSIA--VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 220
Query: 139 TTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ VGT Y++PE Q + DI+S G+ L E
Sbjct: 221 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 257
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 17/126 (13%)
Query: 59 CHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMH---------Q 109
C L++ E M+ G L + + RG + +R I + +++LH H +
Sbjct: 100 CLLIIMECMEGGELFSRIQE--RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPE 157
Query: 110 ALVLLDHDMEA--RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIY 167
L+ + +A ++++FG AK T T Y+APE CD++
Sbjct: 158 NLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW 213
Query: 168 SFGVLL 173
S GV++
Sbjct: 214 SLGVIM 219
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 17/126 (13%)
Query: 59 CHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMH---------Q 109
C L++ E M+ G L + + RG + +R I + +++LH H +
Sbjct: 81 CLLIIMECMEGGELFSRIQE--RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPE 138
Query: 110 ALVLLDHDMEA--RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIY 167
L+ + +A ++++FG AK T T Y+APE CD++
Sbjct: 139 NLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW 194
Query: 168 SFGVLL 173
S GV++
Sbjct: 195 SLGVIM 200
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 78/195 (40%), Gaps = 34/195 (17%)
Query: 1 MIAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCH 60
++A++ + P + A + +++LLT ++H +I+
Sbjct: 47 LVAVKALKDPTLAARKDFQREAELLT--------------NLQHEHIVKFYGVCGDGDPL 92
Query: 61 LLVYEFMKNGSLQDIL------------NDVSRGRRQLDWLARYRTVRGIASGLEYL--- 105
++V+E+MK+G L L + + +L IASG+ YL
Sbjct: 93 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ 152
Query: 106 -HMHQALV----LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI 160
+H+ L L+ ++ +I +FG+++ + + ++ PE
Sbjct: 153 HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKF 212
Query: 161 TYMCDIYSFGVLLAE 175
T D++SFGV+L E
Sbjct: 213 TTESDVWSFGVILWE 227
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 20/149 (13%)
Query: 18 VEADSKLLTEEMMQIR----SEIVTLGQIR-HRNILPLLAHLARPGCHLLVYEFMKNGSL 72
V EE+ ++R E+ L ++ H NI+ L LV++ MK G L
Sbjct: 52 VTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 111
Query: 73 QDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISE 124
D L + + L + +R + + LH +H+ L +LLD DM ++++
Sbjct: 112 FDYLTE----KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTD 167
Query: 125 FGLAKVFPEAHTHITTSDVVGTAGYIAPE 153
FG + +V GT Y+APE
Sbjct: 168 FGFSCQLDPGE---KLREVCGTPSYLAPE 193
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 36/194 (18%)
Query: 6 KIVQPPMDATALVEA------DSKLLTEEMMQIRSEIVTLGQIRHRNILPLL----AHLA 55
K V +D VE D KL E + + E L ++H NI+ + +
Sbjct: 40 KTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVK 99
Query: 56 RPGCHLLVYEFMKNGSLQDILN--DVSRGRRQLDWLARYRTVRGIASGLEYLH------M 107
C +LV E +G+L+ L V + + W R I GL++LH +
Sbjct: 100 GKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW------CRQILKGLQFLHTRTPPII 153
Query: 108 HQAL-----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPE-YQQTLSIT 161
H+ L + +I + GLA + + V+GT + APE Y++ +
Sbjct: 154 HRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VIGTPEFXAPEXYEEKYDES 209
Query: 162 YMCDIYSFGVLLAE 175
D+Y+FG E
Sbjct: 210 --VDVYAFGXCXLE 221
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R EI +RH NIL + + L+ EF G L L R D
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQR 115
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+ +A L Y H + + +L+ + E +I++FG + P +
Sbjct: 116 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRX 171
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + + D++ GVL E
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 204
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 14/150 (9%)
Query: 41 QIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIAS 100
+ H ++ L + ++ E+M NG L + L ++ R R Q L + +
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLE--MCKDVCE 131
Query: 101 GLEYLHMHQAL--------VLLDHDMEARISEFGLAK-VFPEAHTHITTSDVVGTAGYIA 151
+EYL Q L L++ ++S+FGL++ V + T S +
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF--PVRWSP 189
Query: 152 PEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
PE + DI++FGVL+ E SL K
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 219
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R EI +RH NIL + + L+ EF G L L R D
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQR 116
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+ +A L Y H + + +L+ + E +I++FG + P +
Sbjct: 117 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRX 172
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + + D++ GVL E
Sbjct: 173 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 205
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 16/153 (10%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLA 90
Q+R EI +RH NIL + + L+ EF G L L R D
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQR 115
Query: 91 RYRTVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSD 142
+ +A L Y H + + +L+ + E +I++FG + P +
Sbjct: 116 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRX 171
Query: 143 VVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ GT Y+ PE + + D++ GVL E
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 204
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 95 VRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKV------FPEAHTHITT 140
V ++ G++YL +H+ L VLL A+IS+FGL+K + +A TH
Sbjct: 113 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 172
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ APE + D++SFGVL+ E S
Sbjct: 173 -----PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 95 VRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVF-PEAHTHITTSDVVG 145
V ++ G++YL +H+ L VLL A+IS+FGL+K + + + +
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW 176
Query: 146 TAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ APE + D++SFGVL+ E S
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 95 VRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKV------FPEAHTHITT 140
V ++ G++YL +H+ L VLL A+IS+FGL+K + +A TH
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 176
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ APE + D++SFGVL+ E S
Sbjct: 177 P-----VKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 95 VRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKV------FPEAHTHITT 140
V ++ G++YL +H+ L VLL A+IS+FGL+K + +A TH
Sbjct: 111 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 170
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ APE + D++SFGVL+ E S
Sbjct: 171 -----PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 95 VRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKV------FPEAHTHITT 140
V ++ G++YL +H+ L VLL A+IS+FGL+K + +A TH
Sbjct: 123 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 182
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ APE + D++SFGVL+ E S
Sbjct: 183 P-----VKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 52 VAIKKLSRPFQNQTHAKRA------------YRELVLMKXVNHKNIISLL-NVFTPQKTL 98
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
LV E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 99 EEFQDVYLVMELMDANLXQVIQMELDHER--MSYLL-YQMLXGIKHLHSAGIIHRDLKPS 155
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 156 NIVVKSDXTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 171 VLLAE 175
++ E
Sbjct: 213 CIMGE 217
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 20/163 (12%)
Query: 23 KLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL-QDILNDVSR 81
KL + ++ E +++H NI+ L + H LV++ + G L +DI+
Sbjct: 43 KLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV----- 97
Query: 82 GRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEA---RISEFGLAKV 130
R ++ I + Y H +H+ L +LL + ++++FGLA
Sbjct: 98 AREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI- 156
Query: 131 FPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
E + GT GY++PE + + DI++ GV+L
Sbjct: 157 --EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 95 VRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKV------FPEAHTHITT 140
V ++ G++YL +H+ L VLL A+IS+FGL+K + +A TH
Sbjct: 131 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 190
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ APE + D++SFGVL+ E S
Sbjct: 191 -----PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 95 VRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKV------FPEAHTHITT 140
V ++ G++YL +H+ L VLL A+IS+FGL+K + +A TH
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ APE + D++SFGVL+ E S
Sbjct: 193 P-----VKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 95 VRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKV------FPEAHTHITT 140
V ++ G++YL +H+ L VLL A+IS+FGL+K + +A TH
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ APE + D++SFGVL+ E S
Sbjct: 193 P-----VKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 97 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 156
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK A
Sbjct: 157 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA 215
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 216 -----TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 20/163 (12%)
Query: 23 KLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL-QDILNDVSR 81
KL + ++ E +++H NI+ L + H LV++ + G L +DI+
Sbjct: 42 KLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV----- 96
Query: 82 GRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEA---RISEFGLAKV 130
R ++ I + Y H +H+ L +LL + ++++FGLA
Sbjct: 97 AREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI- 155
Query: 131 FPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
E + GT GY++PE + + DI++ GV+L
Sbjct: 156 --EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 196
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLD 87
E ++ +E + + +++ LL +++ L++ E M G L+ L +
Sbjct: 61 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 120
Query: 88 WLAR------YRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVFPE 133
LA + IA G+ YL+ +H+ L ++ D +I +FG+ + E
Sbjct: 121 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
+ + +++PE + T D++SFGV+L E +L +
Sbjct: 181 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 228
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L Y F N +L ++ V G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L Y F N +L ++ V G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 22/128 (17%)
Query: 59 CHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQALVLLDHDM 118
C L+V E + G L + D RG + + I ++YLH ++ + D+
Sbjct: 133 CLLIVXECLDGGELFSRIQD--RGDQAFTEREASEIXKSIGEAIQYLH---SINIAHRDV 187
Query: 119 EA--------------RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMC 164
+ ++++FG AK E +H + + T Y+APE C
Sbjct: 188 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 165 DIYSFGVL 172
D +S GV+
Sbjct: 245 DXWSLGVI 252
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L Y F N +L ++ V G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFXEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 30/164 (18%)
Query: 33 RSEIVTLGQIRH----RNIL-----PLLAHLA---RPGCHL-LVYEFMKNGSLQDILNDV 79
+ ++V L QI H + IL P L L + +L +V E+M G D+ + +
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGG---DMFSHL 132
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVF 131
R R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 133 RRIGRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-- 189
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 ---RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 71 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 130
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 131 GRFXEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 184
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 185 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 225
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 30/164 (18%)
Query: 33 RSEIVTLGQIRH----RNIL-----PLLAHLA---RPGCHL-LVYEFMKNGSLQDILNDV 79
+ ++V L QI H + IL P L L + +L +V E+M G D+ + +
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGG---DMFSHL 132
Query: 80 SRGRRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVF 131
R R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 133 RRIGRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-- 189
Query: 132 PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 ---RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 20/163 (12%)
Query: 23 KLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL-QDILNDVSR 81
KL + ++ E +++H NI+ L + H LV++ + G L +DI+
Sbjct: 43 KLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV----- 97
Query: 82 GRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEA---RISEFGLAKV 130
R ++ I + Y H +H+ L +LL + ++++FGLA
Sbjct: 98 AREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI- 156
Query: 131 FPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
E + GT GY++PE + + DI++ GV+L
Sbjct: 157 --EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
Query: 17 LVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL 76
L + K TEEMM+ E + Q+ + I+ L+ + + +LV E G L L
Sbjct: 45 LKQGTEKADTEEMMR---EAQIMHQLDNPYIVRLIG-VCQAEALMLVMEMAGGGPLHKFL 100
Query: 77 NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLA 128
V + R ++ + ++ G++YL +H+ L VLL + A+IS+FGL+
Sbjct: 101 --VGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLS 157
Query: 129 KVFPEAHTHITTSDVVGTAG-----YIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
K ++ T +AG + APE + D++S+GV + E +S
Sbjct: 158 KALGADDSYYTAR----SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLD 87
E ++ +E + + +++ LL +++ L++ E M G L+ L +
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 130
Query: 88 WLAR------YRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVFPE 133
LA + IA G+ YL+ +H+ L ++ D +I +FG+ + E
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
+ + +++PE + T D++SFGV+L E +L +
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFXEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFXEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 18 VEADSKLLTEEMMQIR----SEIVTLGQIR-HRNILPLLAHLARPGCHLLVYEFMKNGSL 72
V EE+ ++R E+ L ++ H NI+ L LV++ MK G L
Sbjct: 52 VTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 111
Query: 73 QDILNDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISE 124
D L + + L + +R + + LH +H+ L +LLD DM ++++
Sbjct: 112 FDYLTE----KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTD 167
Query: 125 FGLAKVFPEAHTHITTSDVVGTAGYIAPE 153
FG + V GT Y+APE
Sbjct: 168 FGFSCQLDPGE---KLRSVCGTPSYLAPE 193
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 20/163 (12%)
Query: 23 KLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL-QDILNDVSR 81
KL + ++ E +++H NI+ L + H LV++ + G L +DI+
Sbjct: 66 KLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV----- 120
Query: 82 GRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEA---RISEFGLAKV 130
R ++ I + Y H +H+ L +LL + ++++FGLA
Sbjct: 121 AREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI- 179
Query: 131 FPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
E + GT GY++PE + + DI++ GV+L
Sbjct: 180 --EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLD 87
E ++ +E + + +++ LL +++ L++ E M G L+ L + R +++
Sbjct: 56 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL---RPEME 112
Query: 88 --------WLARYRTVRG-IASGLEYLH----MHQALV----LLDHDMEARISEFGLAKV 130
L++ + G IA G+ YL+ +H+ L ++ D +I +FG+ +
Sbjct: 113 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 172
Query: 131 FPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
E + +++PE + T D++SFGV+L E +L +
Sbjct: 173 IXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 223
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 97 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 156
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 157 GRFXEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 210
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 211 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFAEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLD 87
E ++ +E + + +++ LL +++ L++ E M G L+ L + R +++
Sbjct: 58 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL---RPEME 114
Query: 88 --------WLARYRTVRG-IASGLEYLH----MHQALV----LLDHDMEARISEFGLAKV 130
L++ + G IA G+ YL+ +H+ L ++ D +I +FG+ +
Sbjct: 115 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 174
Query: 131 FPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
E + + +++PE + T D++SFGV+L E +L +
Sbjct: 175 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 225
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLD 87
E ++ +E + + +++ LL +++ L++ E M G L+ L + R +++
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL---RPEME 120
Query: 88 --------WLARYRTVRG-IASGLEYLH----MHQALV----LLDHDMEARISEFGLAKV 130
L++ + G IA G+ YL+ +H+ L ++ D +I +FG+ +
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 131 FPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
E + + +++PE + T D++SFGV+L E +L +
Sbjct: 181 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 231
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLD 87
E ++ +E + + +++ LL +++ L++ E M G L+ L + R +++
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL---RPEME 118
Query: 88 --------WLARYRTVRG-IASGLEYLH----MHQALV----LLDHDMEARISEFGLAKV 130
L++ + G IA G+ YL+ +H+ L ++ D +I +FG+ +
Sbjct: 119 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 131 FPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
E + + +++PE + T D++SFGV+L E +L +
Sbjct: 179 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 229
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 17/92 (18%)
Query: 99 ASGLEYLHM----------HQALVLLDH---DMEARISEFGLAKVFPEA-HTHITTSDVV 144
SGL +LH H L+ + + ++A IS+FGL K H+ S V
Sbjct: 128 TSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP 187
Query: 145 GTAGYIAPEYQQ---TLSITYMCDIYSFGVLL 173
GT G+IAPE + TY DI+S G +
Sbjct: 188 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVF 219
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLD 87
E ++ +E + + +++ LL +++ L++ E M G L+ L + R +++
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL---RPEME 120
Query: 88 --------WLARYRTVRG-IASGLEYLH----MHQALV----LLDHDMEARISEFGLAKV 130
L++ + G IA G+ YL+ +H+ L ++ D +I +FG+ +
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 131 FPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
E + + +++PE + T D++SFGV+L E +L +
Sbjct: 181 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 231
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLD 87
E ++ +E + + +++ LL +++ L++ E M G L+ L + R +++
Sbjct: 65 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL---RPEME 121
Query: 88 --------WLARYRTVRG-IASGLEYLH----MHQALV----LLDHDMEARISEFGLAKV 130
L++ + G IA G+ YL+ +H+ L ++ D +I +FG+ +
Sbjct: 122 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 131 FPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
E + +++PE + T D++SFGV+L E +L +
Sbjct: 182 IXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 232
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLD 87
E ++ +E + + +++ LL +++ L++ E M G L+ L + R +++
Sbjct: 65 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL---RPEME 121
Query: 88 --------WLARYRTVRG-IASGLEYLH----MHQALV----LLDHDMEARISEFGLAKV 130
L++ + G IA G+ YL+ +H+ L ++ D +I +FG+ +
Sbjct: 122 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 131 FPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
E + + +++PE + T D++SFGV+L E +L +
Sbjct: 182 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 232
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLD 87
E ++ +E + + +++ LL +++ L++ E M G L+ L +
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 130
Query: 88 WLAR------YRTVRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVFPE 133
LA + IA G+ YL+ +H+ L ++ D +I +FG+ + E
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 134 AHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
+ + +++PE + T D++SFGV+L E +L +
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 77 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 136
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 137 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 190
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFXEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V G
Sbjct: 69 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 128
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 129 GRFXEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 182
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 183 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 223
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 24/135 (17%)
Query: 57 PGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRG----IASGLEYLH----MH 108
P C LV EFM++G L D L RG L T+ G + G+ YL +H
Sbjct: 77 PIC--LVTEFMEHGCLSDYLR-TQRG------LFAAETLLGMCLDVCEGMAYLEEACVIH 127
Query: 109 QALV----LLDHDMEARISEFGLAK-VFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYM 163
+ L L+ + ++S+FG+ + V + +T T + + +PE +
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSK 185
Query: 164 CDIYSFGVLLAEEMS 178
D++SFGVL+ E S
Sbjct: 186 SDVWSFGVLMWEVFS 200
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V G
Sbjct: 77 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 136
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 137 GRFXEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 190
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 18/96 (18%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVF---PEAHTHITT------ 140
IA +E+LH MH+ L + D ++ +FGL E T +T
Sbjct: 127 IAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAR 186
Query: 141 -SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ VGT Y++PE S ++ DI+S G++L E
Sbjct: 187 HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 95 VRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKV------FPEAHTHITT 140
V ++ G++YL +H+ L VLL A+IS+FGL+K + +A TH
Sbjct: 475 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ APE + D++SFGVL+ E S
Sbjct: 535 -----PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 95 VRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKV------FPEAHTHITT 140
V ++ G++YL +H+ L VLL A+IS+FGL+K + +A TH
Sbjct: 476 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 535
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
+ APE + D++SFGVL+ E S
Sbjct: 536 -----PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 52 VAIKKLSRPFQNQTHAKRA------------YRELVLMKCVNHKNIISLL-NVFTPQKTL 98
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
LV E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 99 EEFQDVYLVMELMDANLXQVIQMELDHER--MSYLL-YQMLXGIKHLHSAGIIHRDLKPS 155
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 156 NIVVKSDXTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 171 VLLAE 175
++ E
Sbjct: 213 CIMGE 217
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 52 VAIKKLSRPFQNQTHAKRA------------YRELVLMKXVNHKNIISLL-NVFTPQKTL 98
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
LV E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 99 EEFQDVYLVMELMDANLXQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 155
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 156 NIVVKSDXTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 171 VLLAE 175
++ E
Sbjct: 213 CIMGE 217
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 52 VAIKKLSRPFQNQTHAKRA------------YRELVLMKXVNHKNIISLL-NVFTPQKTL 98
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
LV E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 99 EEFQDVYLVMELMDANLCQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 155
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 156 NIVVKSDXTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 171 VLLAE 175
++ E
Sbjct: 213 CIMGE 217
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 107
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 165
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 166 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 195
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHL-------LVYEFMKNGSLQDILNDVSRGRRQLD 87
E+V L + H+NI+ LL ++ P L LV E M Q I ++ R +
Sbjct: 73 ELVLLKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHER--MS 129
Query: 88 WLARYRTVRGI----ASGLEYLHMHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDV 143
+L Y+ + GI ++G+ + + + +++ D +I +FGLA+ A T+ +
Sbjct: 130 YLL-YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART---ACTNFMMTPY 185
Query: 144 VGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
V T Y APE + DI+S G ++ E
Sbjct: 186 VVTRYYRAPEVILGMGYAANVDIWSVGCIMGE 217
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLD 87
E ++ +E + + +++ LL +++ L++ E M G L+ L + R +++
Sbjct: 93 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL---RPEME 149
Query: 88 --------WLARYRTVRG-IASGLEYLH----MHQALV----LLDHDMEARISEFGLAKV 130
L++ + G IA G+ YL+ +H+ L ++ D +I +FG+ +
Sbjct: 150 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 209
Query: 131 FPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
E + + +++PE + T D++SFGV+L E +L +
Sbjct: 210 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 260
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFXEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 108
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 166
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 167 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 196
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 108
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 166
Query: 147 AGYIAPEYQQTLSITYMC---DIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 167 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 196
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 108
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 166
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 167 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 196
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 111
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 169
Query: 147 AGYIAPEYQQTLSITYMC---DIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 170 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 199
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 110
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 168
Query: 147 AGYIAPEYQQTLSITYMC---DIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 169 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 198
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 108
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 166
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 167 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 196
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 109
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 167
Query: 147 AGYIAPEYQQTLSITYMC---DIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 168 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 197
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 45 VAIKKLSRPFQNQTHAKRA------------YRELVLMKCVNHKNIISLL-NVFTPQKTL 91
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
LV E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 92 EEFQDVYLVMELMDANLXQVIQMELDHER--MSYLL-YQMLXGIKHLHSAGIIHRDLKPS 148
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 149 NIVVKSDXTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205
Query: 171 VLLAE 175
++ E
Sbjct: 206 CIMGE 210
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 107
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 165
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 166 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 195
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 109
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 167
Query: 147 AGYIAPEYQQTLSITYMC---DIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 168 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 197
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 112
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 113 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 170
Query: 147 AGYIAPEYQQTLSITYMC---DIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 171 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 200
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 110
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 168
Query: 147 AGYIAPEYQQTLSITYMC---DIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 169 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 198
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 63 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 122
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 123 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAK----- 176
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 177 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 217
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 16/171 (9%)
Query: 17 LVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDIL 76
L + K TEEMM+ E + Q+ + I+ L+ + + +LV E G L L
Sbjct: 371 LKQGTEKADTEEMMR---EAQIMHQLDNPYIVRLIG-VCQAEALMLVMEMAGGGPLHKFL 426
Query: 77 NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLA 128
V + R ++ + ++ G++YL +H+ L VLL + A+IS+FGL+
Sbjct: 427 --VGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLS 483
Query: 129 KVFPEAHTHITT-SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMS 178
K ++ T S + APE + D++S+GV + E +S
Sbjct: 484 KALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 110
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 168
Query: 147 AGYIAPEYQQTLSITYMC---DIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 169 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 198
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 111
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 169
Query: 147 AGYIAPEYQQTLSITYMC---DIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 170 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 199
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHL-------LVYEFMKNGSLQDILNDVSRGRRQLD 87
E+V L + H+NI+ LL ++ P L LV E M Q I ++ R +
Sbjct: 71 ELVLLKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHER--MS 127
Query: 88 WLARYRTVRGI----ASGLEYLHMHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDV 143
+L Y+ + GI ++G+ + + + +++ D +I +FGLA+ A T+ +
Sbjct: 128 YLL-YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART---ASTNFMMTPY 183
Query: 144 VGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
V T Y APE + DI+S G ++ E
Sbjct: 184 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 215
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 22/145 (15%)
Query: 43 RHRNILPLLAHLARPGCHLLVYEFMKNGSLQD-ILNDVSRGRRQLDWLARYRTVRGIASG 101
+H NI+ L +V E MK G L D IL R+ + + I
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAV-----LFTITKT 128
Query: 102 LEYLHMHQALVLLD-------------HDMEARISEFGLAKVFPEAHTHITTSDVVGTAG 148
+EYLH Q +V D + RI +FG AK + + T TA
Sbjct: 129 VEYLHA-QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP--CYTAN 185
Query: 149 YIAPEYQQTLSITYMCDIYSFGVLL 173
++APE + CDI+S GVLL
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLL 210
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY-- 109
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 167
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 168 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 197
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHL-------LVYEFMKNGSLQDILNDVSRGRRQLD 87
E+V + + H+NI+ LL ++ P L +V E M Q I ++ R +
Sbjct: 73 ELVLMKVVNHKNIIGLL-NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER--MS 129
Query: 88 WLARYRTVRGI----ASGLEYLHMHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDV 143
+L Y+ + GI ++G+ + + + +++ D +I +FGLA+ A T +
Sbjct: 130 YLL-YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMMTPY 185
Query: 144 VGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
V T Y APE + DI+S GV++ E
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ + L+ ++ + L + Y
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSY-- 109
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 167
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 168 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 197
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ + L+ ++ + L + Y
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSY-- 111
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 169
Query: 147 AGYIAPEYQQTLSITYM---CDIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 170 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 199
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 121 RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
RI +FG AK + + T TA ++APE + CDI+S GVLL
Sbjct: 160 RICDFGFAKQLRAENGLLXTP--CYTANFVAPEVLERQGYDAACDIWSLGVLL 210
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
EI L ++ H NI+ LL + LV+EF+ L+ ++ + L + Y
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSY-- 111
Query: 95 VRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
+ + GL + H H+ L +L++ + ++++FGLA+ F +VV T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-T 169
Query: 147 AGYIAPEYQQTLSITYMC---DIYSFGVLLAE 175
Y APE L Y DI+S G + AE
Sbjct: 170 LWYRAPEI--LLGCKYYSTAVDIWSLGCIFAE 199
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V G
Sbjct: 69 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 128
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 129 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 182
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 183 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 223
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHL-------LVYEFMKNGSLQDILNDVSRGRRQLD 87
E+V + + H+NI+ LL ++ P L +V E M Q I ++ R +
Sbjct: 73 ELVLMKVVNHKNIIGLL-NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER--MS 129
Query: 88 WLARYRTVRGI----ASGLEYLHMHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDV 143
+L Y+ + GI ++G+ + + + +++ D +I +FGLA+ A T +
Sbjct: 130 YLL-YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMMTPY 185
Query: 144 VGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
V T Y APE + DI+S GV++ E
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V G
Sbjct: 77 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 136
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 137 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 190
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V G
Sbjct: 77 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 136
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 137 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 190
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V G
Sbjct: 62 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 121
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 122 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 175
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 176 RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 216
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V G
Sbjct: 77 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 136
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 137 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 190
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 191 RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V G
Sbjct: 77 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 136
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 137 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 190
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V G
Sbjct: 77 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 136
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 137 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 190
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 34.3 bits (77), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 18/153 (11%)
Query: 32 IRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLAR 91
++ EI L RHRNIL L ++++EF+ S DI ++ +L+
Sbjct: 48 VKKEISILNIARHRNILHLHESFESMEELVMIFEFI---SGLDIFERINTSAFELNEREI 104
Query: 92 YRTVRGIASGLEYLHMH----------QALVLLDHDMEARISEFGLAKVFPEAHTHITTS 141
V + L++LH H + +I EFG A+
Sbjct: 105 VSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF---- 160
Query: 142 DVVGTA-GYIAPEYQQTLSITYMCDIYSFGVLL 173
++ TA Y APE Q ++ D++S G L+
Sbjct: 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLV 193
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 34.3 bits (77), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 18/96 (18%)
Query: 98 IASGLEYLH----MHQAL----VLLDHDMEARISEFGLAK----------VFPEAHTHIT 139
IA +E+LH MH+ L + D ++ +FGL V + T
Sbjct: 173 IAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAT 232
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
VGT Y++PE + ++ DI+S G++L E
Sbjct: 233 HXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFE 268
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 28 EMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLD 87
E ++ +E + + +++ LL +++ L++ E M G L+ L + R +++
Sbjct: 58 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL---RPEME 114
Query: 88 --------WLARYRTVRG-IASGLEYLH----MHQALVLLD----HDMEARISEFGLAKV 130
L++ + G IA G+ YL+ +H+ L + D +I +FG+ +
Sbjct: 115 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRD 174
Query: 131 FPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSLVK 181
E + + +++PE + T D++SFGV+L E +L +
Sbjct: 175 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 225
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V G
Sbjct: 97 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI 156
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 157 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 210
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 211 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQ---------DILNDVSRG 82
+ ++V L QI H N +L + P L + F N +L ++ + + R
Sbjct: 77 KQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI 136
Query: 83 RRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +++D ++++FG AK
Sbjct: 137 GRFXEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----- 190
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 52 VAIKKLSRPFQNQTHAKRA------------YRELVLMKCVNHKNIISLL-NVFTPQKTL 98
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
LV E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 99 EEFQDVYLVMELMDANLCQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 155
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 156 NIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 171 VLLAE 175
++ E
Sbjct: 213 CIMGE 217
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 33.9 bits (76), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +++D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYE 230
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 53 VAIKKLSRPFQNQTHAKRA------------YRELVLMKCVNHKNIISLL-NVFTPQKTL 99
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
LV E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 100 EEFQDVYLVMELMDANLCQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 156
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 157 NIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 171 VLLAE 175
++ E
Sbjct: 214 CIMGE 218
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 33.5 bits (75), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 51 VAIKKLSRPFQNQTHAKRA------------YRELVLMKCVNHKNIISLL-NVFTPQKTL 97
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
LV E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 98 EEFQDVYLVMELMDANLCQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 154
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 155 NIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 211
Query: 171 VLLAE 175
++ E
Sbjct: 212 CIMGE 216
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 33.5 bits (75), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 53 VAIKKLSRPFQNQTHAKRA------------YRELVLMKCVNHKNIISLL-NVFTPQKTL 99
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
LV E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 100 EEFQDVYLVMELMDANLCQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 156
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 157 NIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 171 VLLAE 175
++ E
Sbjct: 214 CIMGE 218
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 33.5 bits (75), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 45 VAIKKLSRPFQNQTHAKRA------------YRELVLMKCVNHKNIISLL-NVFTPQKTL 91
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
LV E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 92 EEFQDVYLVMELMDANLCQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 148
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 149 NIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205
Query: 171 VLLAE 175
++ E
Sbjct: 206 CIMGE 210
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 33.5 bits (75), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 52 VAIKKLSRPFQNQTHAKRA------------YRELVLMKCVNHKNIISLL-NVFTPQKTL 98
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
LV E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 99 EEFQDVYLVMELMDANLCQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 155
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 156 NIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 171 VLLAE 175
++ E
Sbjct: 213 CIMGE 217
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 33.5 bits (75), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 27/187 (14%)
Query: 16 ALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDI 75
AL EA + Q +E++T+ ++H++I+ L+V+E+M++G L
Sbjct: 55 ALKEASES--ARQDFQREAELLTM--LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 110
Query: 76 L-------------NDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQALV----LL 114
L DV+ G L L +A+G+ YL +H+ L L+
Sbjct: 111 LRSHGPDAKLLAGGEDVAPGPLGLGQL--LAVASQVAAGMVYLAGLHFVHRDLATRNCLV 168
Query: 115 DHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLA 174
+ +I +FG+++ + + ++ PE T D++SFGV+L
Sbjct: 169 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLW 228
Query: 175 EEMSLVK 181
E + K
Sbjct: 229 EIFTYGK 235
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 33.5 bits (75), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 27/187 (14%)
Query: 16 ALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDI 75
AL EA + Q +E++T+ ++H++I+ L+V+E+M++G L
Sbjct: 49 ALKEASES--ARQDFQREAELLTM--LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 104
Query: 76 L-------------NDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQALV----LL 114
L DV+ G L L +A+G+ YL +H+ L L+
Sbjct: 105 LRSHGPDAKLLAGGEDVAPGPLGLGQL--LAVASQVAAGMVYLAGLHFVHRDLATRNCLV 162
Query: 115 DHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLA 174
+ +I +FG+++ + + ++ PE T D++SFGV+L
Sbjct: 163 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLW 222
Query: 175 EEMSLVK 181
E + K
Sbjct: 223 EIFTYGK 229
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 33.5 bits (75), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
T + GT Y+APE + D ++ GVL+
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 33.5 bits (75), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 46 VAIKKLSRPFQNQTHAKRA------------YRELVLMKCVNHKNIISLL-NVFTPQKTL 92
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
LV E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 93 EEFQDVYLVMELMDANLCQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 149
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 150 NIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 206
Query: 171 VLLAE 175
++ E
Sbjct: 207 CIMGE 211
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 46 VAIKKLSRPFQNQTHAKRA------------YRELVLMKCVNHKNIISLL-NVFTPQKTL 92
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
LV E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 93 EEFQDVYLVMELMDANLCQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 149
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 150 NIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 206
Query: 171 VLLAE 175
++ E
Sbjct: 207 CIMGE 211
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E L Q H NI+ L+ + +V E ++ G L + G R L +
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR--TEGAR-LRVKTLLQM 218
Query: 95 VRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
V A+G+EYL +H+ L L+ +IS+FG+++ + +
Sbjct: 219 VGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVP 278
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ APE + D++SFG+LL E SL
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFSL 311
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQ---------DILNDVSRG 82
+ ++V L QI H N +L + P L + F N +L ++ + + R
Sbjct: 77 KQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI 136
Query: 83 RRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +++D ++++FG AK
Sbjct: 137 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----- 190
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQ---------DILNDVSRG 82
+ ++V L QI H N +L + P L + F N +L ++ + + R
Sbjct: 77 KQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI 136
Query: 83 RRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +++D ++++FG AK
Sbjct: 137 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----- 190
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 44 HRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIAS--- 100
H NI+ LL G L E+ +G+L D L R R L+ + AS
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLS 137
Query: 101 -------------GLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHIT 139
G++YL Q + +L+ + A+I++FGL++ E + T
Sbjct: 138 SQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRG-QEVYVKKT 196
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ ++A E T D++S+GVLL E +SL
Sbjct: 197 MGRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL 234
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 90 VAIKKLSRPFQNQTHAKRA------------YRELVLMKCVNHKNIISLL-NVFTPQKTL 136
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
LV E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 137 EEFQDVYLVMELMDANLCQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 193
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 194 NIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250
Query: 171 VLLAE 175
++ E
Sbjct: 251 CIMGE 255
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQ---------DILNDVSRG 82
+ ++V L QI H N +L + P L + F N +L ++ + + R
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI 135
Query: 83 RRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +++D ++++FG AK
Sbjct: 136 GRFXEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 90 VAIKKLSRPFQNQTHAKRA------------YRELVLMKCVNHKNIISLL-NVFTPQKTL 136
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
LV E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 137 EEFQDVYLVMELMDANLCQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 193
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 194 NIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250
Query: 171 VLLAE 175
++ E
Sbjct: 251 CIMGE 255
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 41/194 (21%)
Query: 16 ALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDI 75
AL EA + Q +E++T+ ++H++I+ L+V+E+M++G L
Sbjct: 78 ALKEASES--ARQDFQREAELLTM--LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 133
Query: 76 L-------------NDVSRGRRQLDWLARYRTVRGIASGLEYL----HMHQALV----LL 114
L DV+ G L L +A+G+ YL +H+ L L+
Sbjct: 134 LRSHGPDAKLLAGGEDVAPGPLGLGQL--LAVASQVAAGMVYLAGLHFVHRDLATRNCLV 191
Query: 115 DHDMEARISEFGLAKVFPEAHTHITTSDVVGTAG-------YIAPEYQQTLSITYMCDIY 167
+ +I +FG+++ I ++D G ++ PE T D++
Sbjct: 192 GQGLVVKIGDFGMSR-------DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVW 244
Query: 168 SFGVLLAEEMSLVK 181
SFGV+L E + K
Sbjct: 245 SFGVVLWEIFTYGK 258
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 44 HRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIAS--- 100
H NI+ LL G L E+ +G+L D L R R L+ + AS
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLS 130
Query: 101 -------------GLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHIT 139
G++YL Q + +L+ + A+I++FGL++ E + T
Sbjct: 131 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG-QEVYVKKT 189
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ ++A E T D++S+GVLL E +SL
Sbjct: 190 MGRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL 227
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRS--EIVTLGQIRHRNILPLLAHLARPGC 59
+AI+K+ +P E+ R+ E+ L +RH N++ LL + P
Sbjct: 53 VAIKKLYRP--------------FQSELFAKRAYRELRLLKHMRHENVIGLL-DVFTPDE 97
Query: 60 HL-------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMH 108
L LV FM L ++ G ++ +L Y+ ++G+ A+G+ + +
Sbjct: 98 TLDDFTDFYLVMPFMGT-DLGKLMKHEKLGEDRIQFLV-YQMLKGLRYIHAAGIIHRDLK 155
Query: 109 QALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEY-QQTLSITYMCDIY 167
+ ++ D E +I +FGLA+ +A + + V T Y APE + T DI+
Sbjct: 156 PGNLAVNEDCELKILDFGLAR---QADSEMXGX--VVTRWYRAPEVILNWMRYTQTVDIW 210
Query: 168 SFGVLLAE 175
S G ++AE
Sbjct: 211 SVGCIMAE 218
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 102 LEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLS 159
L Y+H + +L+D + R+++FG E T + +S VGT YI+PE Q +
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAME 252
Query: 160 -----ITYMCDIYSFGVLLAE 175
CD +S GV + E
Sbjct: 253 GGKGRYGPECDWWSLGVCMYE 273
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 44 HRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIAS--- 100
H NI+ LL G L E+ +G+L D L R R L+ + AS
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLS 140
Query: 101 -------------GLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHIT 139
G++YL Q + +L+ + A+I++FGL++ E + T
Sbjct: 141 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG-QEVYVKKT 199
Query: 140 TSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ ++A E T D++S+GVLL E +SL
Sbjct: 200 MGRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL 237
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRT 94
E L Q H NI+ L+ + +V E ++ G L + G R L +
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR--TEGAR-LRVKTLLQM 218
Query: 95 VRGIASGLEYLH----MHQALV----LLDHDMEARISEFGLAKVFPEAHTHITTSDVVGT 146
V A+G+EYL +H+ L L+ +IS+FG+++ + +
Sbjct: 219 VGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVP 278
Query: 147 AGYIAPEYQQTLSITYMCDIYSFGVLLAEEMSL 179
+ APE + D++SFG+LL E SL
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFSL 311
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 23/193 (11%)
Query: 3 AIRKIVQPPMDATALVEADSKLLTEEM-----MQIRSEIVTLGQIRHRNILPLLAHLARP 57
+ K + P T + K+L E ++ E + + + H +++ LL P
Sbjct: 53 TVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP 112
Query: 58 GCHLLVYEFMKNGSLQDILN---DVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQA 110
L V + M +G L + ++ D + L+W + IA G+ YL +H+
Sbjct: 113 TIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEERRLVHRD 165
Query: 111 L----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDI 166
L VL+ +I++FGLA++ ++A E T+ D+
Sbjct: 166 LAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDV 225
Query: 167 YSFGVLLAEEMSL 179
+S+GV + E M+
Sbjct: 226 WSYGVTIWELMTF 238
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 42 IRHRNILPLLAHLARPGCHLLVYEFMKNGSL-QDILNDVSRGRRQLDWLARYRTVRGIAS 100
++H +I+ LL + G +V+EFM L +I+ G + +A + +R I
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH-YMRQILE 141
Query: 101 GLEYLHMHQAL--------VLL---DHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGY 149
L Y H + + VLL ++ ++ +FG+A E + + VGT +
Sbjct: 142 ALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGE--SGLVAGGRVGTPHF 199
Query: 150 IAPEYQQTLSITYMCDIYSFGVLL 173
+APE + D++ GV+L
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVIL 223
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 117 DMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
++E +I +FG A++ P + + T T Y APE CD++S GV+L
Sbjct: 145 NLEIKIIDFGFARLKPPDNQPLKTP--CFTLHYAAPELLNQNGYDESCDLWSLGVIL 199
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 23/193 (11%)
Query: 3 AIRKIVQPPMDATALVEADSKLLTEEM-----MQIRSEIVTLGQIRHRNILPLLAHLARP 57
+ K + P T + K+L E ++ E + + + H +++ LL P
Sbjct: 30 TVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP 89
Query: 58 GCHLLVYEFMKNGSLQDILN---DVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQA 110
L V + M +G L + ++ D + L+W + IA G+ YL +H+
Sbjct: 90 TIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEERRLVHRD 142
Query: 111 L----VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDI 166
L VL+ +I++FGLA++ ++A E T+ D+
Sbjct: 143 LAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDV 202
Query: 167 YSFGVLLAEEMSL 179
+S+GV + E M+
Sbjct: 203 WSYGVTIWELMTF 215
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 102 LEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTL- 158
L Y+H + VLLD + R+++FG + T + +S VGT YI+PE Q +
Sbjct: 194 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYISPEILQAME 252
Query: 159 ----SITYMCDIYSFGVLLAE 175
CD +S GV + E
Sbjct: 253 DGMGKYGPECDWWSLGVCMYE 273
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 29/169 (17%)
Query: 22 SKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL-QDILNDVS 80
KL + ++ E ++H NI+ L ++ G H LV++ + G L +DI V+
Sbjct: 40 KKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDI---VA 96
Query: 81 RGRRQLDWLARYRTVRGIASGLE-YLHMHQALVLLDHDME--------------ARISEF 125
R ++ + I LE LH HQ + ++ D++ ++++F
Sbjct: 97 R-----EYYSEADASHCIQQILEAVLHCHQ-MGVVHRDLKPENLLLASKCKGAAVKLADF 150
Query: 126 GLA-KVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
GLA +V + GT GY++PE + + DI++ GV+L
Sbjct: 151 GLAIEVQGDQQAWF---GFAGTPGYLSPEVLRKEAYGKPVDIWACGVIL 196
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQ---------DILNDVSRG 82
+ ++V L QI H N +L + P L + F N +L ++ + + R
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI 135
Query: 83 RRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +++D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 102 LEYLH--MHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTL- 158
L Y+H + VLLD + R+++FG + T + +S VGT YI+PE Q +
Sbjct: 210 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYISPEILQAME 268
Query: 159 ----SITYMCDIYSFGVLLAE 175
CD +S GV + E
Sbjct: 269 DGMGKYGPECDWWSLGVCMYE 289
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQ---------DILNDVSRG 82
+ ++V L QI H N +L + P L + F N +L ++ + + R
Sbjct: 77 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI 136
Query: 83 RRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +++D ++++FG AK
Sbjct: 137 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----- 190
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 52 VAIKKLSRPFQNQTHAKRA------------YRELVLMKCVNHKNIIGLL-NVFTPQKSL 98
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
+V E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 155
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 156 NIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 171 VLLAE 175
++ E
Sbjct: 213 CIMGE 217
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 121 RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
R+++FG A H H TT +V T Y PE L CD++S G +L E
Sbjct: 182 RVADFGSATF---DHEHHTT--IVATRHYRPPEVILELGWAQPCDVWSIGCILFE 231
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 53 VAIKKLSRPFQNQTHAKRA------------YRELVLMKCVNHKNIIGLL-NVFTPQKSL 99
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
+V E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 100 EEFQDVYIVMELMDANLCQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 156
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 157 NIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 171 VLLAE 175
++ E
Sbjct: 214 CIMGE 218
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 121 RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
R+ +FG A E H S +V T Y APE L + CD++S G ++ E
Sbjct: 196 RVVDFGSATFDHEHH-----STIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFE 245
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 121 RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
R+++FG A H H TT +V T Y PE L CD++S G +L E
Sbjct: 191 RVADFGSATF---DHEHHTT--IVATRHYRPPEVILELGWAQPCDVWSIGCILFE 240
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 15/155 (9%)
Query: 31 QIRSEIVTLGQIRHRNILPLLAHLARPGCH--LLVYEFMKNGSLQDILNDVSRGRRQLDW 88
++ EI L ++RH+N++ L+ L +V E+ G +Q++L+ V R +
Sbjct: 52 NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQ 110
Query: 89 LARYRTVRGIASGLEYLH----MHQAL----VLLDHDMEARISEFGLAKVFPEAHTHITT 140
Y + GLEYLH +H+ + +LL +IS G+A+ T
Sbjct: 111 AHGYFCQ--LIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTC 168
Query: 141 SDVVGTAGYIAPEYQQTLSI--TYMCDIYSFGVLL 173
G+ + PE L + DI+S GV L
Sbjct: 169 RTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTL 203
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQ---------DILNDVSRG 82
+ ++V L +I H N +L + P L + F N +L ++ + + R
Sbjct: 76 KQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI 135
Query: 83 RRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +++D ++++FGLAK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 52 VAIKKLSRPFQNQTHAKRA------------YRELVLMKCVNHKNIIGLL-NVFTPQKSL 98
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
+V E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 155
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 156 NIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 171 VLLAE 175
++ E
Sbjct: 213 CIMGE 217
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N +L + P L + F N +L ++ V+ G
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI 135
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+AP + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYE 230
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 121 RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
R+++FG A E HT +V T Y PE L CD++S G +L E
Sbjct: 214 RVADFGSATFDHEHHT-----TIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 263
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHL-------LVYEFMKNGSLQDILNDVSRGRRQLD 87
E+V + + H+NI+ LL ++ P L +V E M Q I ++ R +
Sbjct: 73 ELVLMKVVNHKNIIGLL-NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER--MS 129
Query: 88 WLARYRTVRGI----ASGLEYLHMHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDV 143
+L Y+ + GI ++G+ + + + +++ D +I +FGLA+ A T +
Sbjct: 130 YLL-YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMMTPY 185
Query: 144 VGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
V T Y APE + DI+S G ++ E
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHL-------LVYEFMKNGSLQDILNDVSRGRRQLD 87
E+V + + H+NI+ LL ++ P L +V E M Q I ++ R +
Sbjct: 73 ELVLMKCVNHKNIIGLL-NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER--MS 129
Query: 88 WLARYRTVRGI----ASGLEYLHMHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDV 143
+L Y+ + GI ++G+ + + + +++ D +I +FGLA+ A T +
Sbjct: 130 YLL-YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPE 185
Query: 144 VGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
V T Y APE + DI+S G ++ E
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 52 VAIKKLSRPFQNQTHAKRA------------YRELVLMKVVNHKNIIGLL-NVFTPQKSL 98
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
+V E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 155
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 156 NIVVKSDATLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 171 VLLAE 175
++ E
Sbjct: 213 CIMGE 217
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQ---------DILNDVSRG 82
+ ++V L QI H N +L + P L + F N +L ++ + + R
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI 135
Query: 83 RRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +++D ++++FG AK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 119 EARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ ++ +FG A E H S +V T Y APE L + CD++S G +L E
Sbjct: 175 DIKVVDFGSATYDDEHH-----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIE 226
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 52 VAIKKLSRPFQNQTHAKRA------------YRELVLMKCVNHKNIIGLL-NVFTPQKSL 98
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
+V E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 155
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 156 NIVVKSDATLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 171 VLLAE 175
++ E
Sbjct: 213 CIMGE 217
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQ---------DILNDVSRG 82
+ ++V L +I H N +L + P L + F N +L ++ + + R
Sbjct: 76 KQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI 135
Query: 83 RRQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +++D ++++FGLAK
Sbjct: 136 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK----- 189
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 2 IAIRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHL 61
+AI+K+ +P + T A E+V + + H+NI+ LL ++ P L
Sbjct: 52 VAIKKLSRPFQNQTHAKRA------------YRELVLMKCVNHKNIIGLL-NVFTPQKSL 98
Query: 62 -------LVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGI----ASGLEYLHMHQA 110
+V E M Q I ++ R + +L Y+ + GI ++G+ + + +
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHER--MSYLL-YQMLCGIKHLHSAGIIHRDLKPS 155
Query: 111 LVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+++ D +I +FGLA+ A T + V T Y APE + DI+S G
Sbjct: 156 NIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 171 VLLAE 175
++ E
Sbjct: 213 CIMGE 217
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Query: 42 IRHRNILPLLAHLARPGCHLLVYEFMKNGSL-QDILNDVSRGRRQLDWLARYRTVRGIAS 100
++H +I+ LL + G +V+EFM L +I+ G + +A + +R I
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH-YMRQILE 141
Query: 101 GLEYLHMHQAL--------VLL---DHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGY 149
L Y H + + VLL ++ ++ FG+A E + + VGT +
Sbjct: 142 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE--SGLVAGGRVGTPHF 199
Query: 150 IAPEYQQTLSITYMCDIYSFGVLL 173
+APE + D++ GV+L
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVIL 223
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 24/161 (14%)
Query: 33 RSEIVTLGQIRHR-NILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGR-------- 83
+ ++V L QI H N + + P L + F N +L +L G
Sbjct: 77 KQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRI 136
Query: 84 -RQLDWLARYRTVRGIASGLEYLH--------MHQALVLLDHDMEARISEFGLAKVFPEA 134
R + AR+ + I EYLH + +L+D ++++FG AK
Sbjct: 137 GRFSEPHARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK----- 190
Query: 135 HTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
T + GT Y+APE + D ++ GVL+ E
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Query: 42 IRHRNILPLLAHLARPGCHLLVYEFMKNGSL-QDILNDVSRGRRQLDWLARYRTVRGIAS 100
++H +I+ LL + G +V+EFM L +I+ G + +A + +R I
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH-YMRQILE 143
Query: 101 GLEYLHMHQAL--------VLL---DHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGY 149
L Y H + + VLL ++ ++ FG+A E + + VGT +
Sbjct: 144 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE--SGLVAGGRVGTPHF 201
Query: 150 IAPEYQQTLSITYMCDIYSFGVLL 173
+APE + D++ GV+L
Sbjct: 202 MAPEVVKREPYGKPVDVWGCGVIL 225
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 27/175 (15%)
Query: 15 TALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL-Q 73
A++ KL + ++ E ++H NI+ L ++ G H L+++ + G L +
Sbjct: 40 AAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFE 99
Query: 74 DILNDVSRGRRQLDWLARYRTVRGIASGLE-YLHMHQALV----------LLDHDMEA-- 120
DI V+R ++ + I LE LH HQ V LL ++
Sbjct: 100 DI---VAR-----EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAA 151
Query: 121 -RISEFGLA-KVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
++++FGLA +V E GT GY++PE + D+++ GV+L
Sbjct: 152 VKLADFGLAIEVEGEQQAWF---GFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 203
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 21/164 (12%)
Query: 23 KLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL-QDILNDVSR 81
KL + ++ E ++H NI+ L ++ G H LV++ + G L +DI+
Sbjct: 41 KLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV----- 95
Query: 82 GRRQLDWLARYRTVRGIASGLEYLHMH---------QALVLLDHDMEA--RISEFGLA-K 129
R ++ I + + H++ + L+L A ++++FGLA +
Sbjct: 96 AREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE 155
Query: 130 VFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
V + GT GY++PE + D+++ GV+L
Sbjct: 156 VQGDQQAWF---GFAGTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 21/164 (12%)
Query: 23 KLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL-QDILNDVSR 81
KL + ++ E ++H NI+ L ++ G H LV++ + G L +DI+
Sbjct: 41 KLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV----- 95
Query: 82 GRRQLDWLARYRTVRGIASGLEYLHMH---------QALVLLDHDMEA--RISEFGLA-K 129
R ++ I + + H++ + L+L A ++++FGLA +
Sbjct: 96 AREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE 155
Query: 130 VFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
V + GT GY++PE + D+++ GV+L
Sbjct: 156 VQGDQQAWF---GFAGTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 27/167 (16%)
Query: 23 KLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSL-QDILNDVSR 81
KL + ++ E ++H NI+ L ++ G H L+++ + G L +DI V+R
Sbjct: 59 KLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI---VAR 115
Query: 82 GRRQLDWLARYRTVRGIASGLE-YLHMHQALV----------LLDHDMEA---RISEFGL 127
++ + I LE LH HQ V LL ++ ++++FGL
Sbjct: 116 -----EYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGL 170
Query: 128 A-KVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLL 173
A +V E GT GY++PE + D+++ GV+L
Sbjct: 171 AIEVEGEQQAWFG---FAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 214
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 16/107 (14%)
Query: 101 GLEYLHMHQALVLLDHDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSI 160
G+ Y + +LLD + +++FGL+K F T D GT Y+AP+ +
Sbjct: 179 GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIVRGGDS 237
Query: 161 TY--MCDIYSFGVLL-------------AEEMSLVKWMRNVMTSENP 192
+ D +S GVL+ E+ S + R ++ SE P
Sbjct: 238 GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP 284
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 30.8 bits (68), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 146
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 204
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 205 YGVTVWELMTF 215
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 30.4 bits (67), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 127 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 180
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 181 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 238
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 239 YGVTVWELMTF 249
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 30.4 bits (67), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 94 LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 147
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 148 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 205
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 206 YGVTVWELMTF 216
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 30.4 bits (67), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 93 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 146
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 204
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 205 YGVTVWELMTF 215
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 30.4 bits (67), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 87 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 140
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 141 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 198
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 199 YGVTVWELMTF 209
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 30.4 bits (67), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 96 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 149
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 207
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 208 YGVTVWELMTF 218
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 103 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 156
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 157 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 214
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 215 YGVTVWELMTF 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 30.4 bits (67), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 94 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 147
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 148 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 205
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 206 YGVTVWELMTF 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 95 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 148
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 149 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 206
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 207 YGVTVWELMTF 217
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 100 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 153
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 211
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 212 YGVTVWELMTF 222
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 93 LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 146
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 204
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 205 YGVTVWELMTF 215
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 30.4 bits (67), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 146
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 204
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 205 YGVTVWELMTF 215
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 30.4 bits (67), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 96 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 149
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 207
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 208 YGVTVWELMTF 218
>pdb|3KZW|A Chain A, Crystal Structure Of Cytosol Aminopeptidase From
Staphylococcus Aureus Col
pdb|3KZW|B Chain B, Crystal Structure Of Cytosol Aminopeptidase From
Staphylococcus Aureus Col
pdb|3KZW|C Chain C, Crystal Structure Of Cytosol Aminopeptidase From
Staphylococcus Aureus Col
pdb|3KZW|D Chain D, Crystal Structure Of Cytosol Aminopeptidase From
Staphylococcus Aureus Col
pdb|3KZW|E Chain E, Crystal Structure Of Cytosol Aminopeptidase From
Staphylococcus Aureus Col
pdb|3KZW|F Chain F, Crystal Structure Of Cytosol Aminopeptidase From
Staphylococcus Aureus Col
pdb|3KZW|G Chain G, Crystal Structure Of Cytosol Aminopeptidase From
Staphylococcus Aureus Col
pdb|3KZW|H Chain H, Crystal Structure Of Cytosol Aminopeptidase From
Staphylococcus Aureus Col
pdb|3KZW|I Chain I, Crystal Structure Of Cytosol Aminopeptidase From
Staphylococcus Aureus Col
pdb|3KZW|J Chain J, Crystal Structure Of Cytosol Aminopeptidase From
Staphylococcus Aureus Col
pdb|3KZW|K Chain K, Crystal Structure Of Cytosol Aminopeptidase From
Staphylococcus Aureus Col
pdb|3KZW|L Chain L, Crystal Structure Of Cytosol Aminopeptidase From
Staphylococcus Aureus Col
Length = 515
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 13 DATALVEADSKLLTEEMMQIRSEIVTL-----------GQIRHRNILPLLAHLARPGCHL 61
D A E++SK++ +++QI SE+ + I+H +I L+ H G L
Sbjct: 404 DKAAAFESNSKVILNDILQISSEVDEMVFELPITATERASIKHSDIADLVNHTNGQGKAL 463
Query: 62 LVYEFMKNGSLQ 73
F+ + S Q
Sbjct: 464 FAASFVTHFSGQ 475
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 100 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 153
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 211
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 212 YGVTVWELMTF 222
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 96 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 149
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 207
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 208 YGVTVWELMTF 218
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 100 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 153
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 211
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 212 YGVTVWELMTF 222
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 146
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 204
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 205 YGVTVWELMTF 215
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 96 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 149
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 207
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 208 YGVTVWELMTF 218
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 99 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 152
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 153 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 210
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 211 YGVTVWELMTF 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 97 LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 150
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 151 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 208
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 209 YGVTVWELMTF 219
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 95 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 148
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 149 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 206
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 207 YGVTVWELMTF 217
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 90 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAEGMNYLEDRRLVHRDLAAR 143
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 144 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 201
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 202 YGVTVWELMTF 212
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 62 LVYEFMKNGSLQDIL---NDVSRGRRQLDWLARYRTVRGIASGLEYLH----MHQAL--- 111
L+ + M G L D + D + L+W + IA G+ YL +H+ L
Sbjct: 118 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRRLVHRDLAAR 171
Query: 112 -VLLDHDMEARISEFGLAKVF--PEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYS 168
VL+ +I++FGLAK+ E H V ++A E T+ D++S
Sbjct: 172 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWS 229
Query: 169 FGVLLAEEMSL 179
+GV + E M+
Sbjct: 230 YGVTVWELMTF 240
>pdb|4EPQ|A Chain A, Canonical Poly(Adp-Ribose) Glycohydrolase Rbpi Inhibitor
Complex From Tetrahymena Thermophila
Length = 477
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 58 GCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL-----V 112
G H++ E +N +QD + + +L W+ + +T++ ++SG + L Q+L +
Sbjct: 18 GSHMIEAEKQENKKIQDYQFPLPQKNSEL-WIIQKKTLQDLSSGKQKLDSFQSLESILEI 76
Query: 113 LLDHDMEARISEFGLAKVFPE 133
L D + F L VF +
Sbjct: 77 LRDSKNQNDEKYFNLKAVFEQ 97
>pdb|4EPP|A Chain A, Canonical Poly(Adp-Ribose) Glycohydrolase From Tetrahymena
Thermophila.
pdb|4EPP|B Chain B, Canonical Poly(Adp-Ribose) Glycohydrolase From Tetrahymena
Thermophila
Length = 477
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 58 GCHLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMHQAL-----V 112
G H++ E +N +QD + + +L W+ + +T++ ++SG + L Q+L +
Sbjct: 18 GSHMIEAEKQENKKIQDYQFPLPQKNSEL-WIIQKKTLQDLSSGKQKLDSFQSLESILEI 76
Query: 113 LLDHDMEARISEFGLAKVFPE 133
L D + F L VF +
Sbjct: 77 LRDSKNQNDEKYFNLKAVFEQ 97
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 64/154 (41%), Gaps = 17/154 (11%)
Query: 39 LGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILND-------VSRGR--RQLDWL 89
L ++H +I+ ++V+E+MK+G L L ++ G +L
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 90 ARYRTVRGIASGLEYL----HMHQALV----LLDHDMEARISEFGLAKVFPEAHTHITTS 141
+ IA+G+ YL +H+ L L+ ++ +I +FG+++ +
Sbjct: 129 QMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGG 188
Query: 142 DVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ ++ PE T D++S GV+L E
Sbjct: 189 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWE 222
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 16/92 (17%)
Query: 93 RTVRGIASGLEYLHMHQALVLLDHDMEA------------RISEFGLAKVFPEAHTHITT 140
R ++ I G+ YLH + +V LD + +I +FG+++ A
Sbjct: 135 RLIKQILEGVYYLHQNN-IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA---CEL 190
Query: 141 SDVVGTAGYIAPEYQQTLSITYMCDIYSFGVL 172
+++GT Y+APE IT D+++ G++
Sbjct: 191 REIMGTPEYLAPEILNYDPITTATDMWNIGII 222
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 30/120 (25%)
Query: 100 SGLEYLHMHQALVLLDHDMEARISEFGLAK-VFPEAHTHIT------------------- 139
SG+ + + A LL+ D +I +FGLA+ + + HI
Sbjct: 150 SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNL 209
Query: 140 ----TSDVVGTAGYIAPE---YQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENP 192
TS VV T Y APE Q+ + T DI+S G + AE ++++K N T+ P
Sbjct: 210 KKQLTSHVV-TRWYRAPELILLQE--NYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFP 266
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 121 RISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
++ +FG A + H ++ T Y APE L D++SFG +LAE
Sbjct: 202 KLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 20/129 (15%)
Query: 63 VYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMH-------QALVLLD 115
+Y M+ G++ LN + ++ +D R + + + +H H + L
Sbjct: 87 IYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 144
Query: 116 HDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSIT-----------YMC 164
D ++ +FG+A T + VGT Y+ PE + +S +
Sbjct: 145 VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 204
Query: 165 DIYSFGVLL 173
D++S G +L
Sbjct: 205 DVWSLGCIL 213
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 20/129 (15%)
Query: 63 VYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMH-------QALVLLD 115
+Y M+ G++ LN + ++ +D R + + + +H H + L
Sbjct: 83 IYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 140
Query: 116 HDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSIT-----------YMC 164
D ++ +FG+A T + VGT Y+ PE + +S +
Sbjct: 141 VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 200
Query: 165 DIYSFGVLL 173
D++S G +L
Sbjct: 201 DVWSLGCIL 209
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 119 EARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFGVLLAE 175
+ ++ +FG A E H S +V Y APE L + CD++S G +L E
Sbjct: 175 DIKVVDFGSATYDDEHH-----STLVXXRHYRAPEVILALGWSQPCDVWSIGCILIE 226
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 20/129 (15%)
Query: 63 VYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMH-------QALVLLD 115
+Y M+ G++ LN + ++ +D R + + + +H H + L
Sbjct: 131 IYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 188
Query: 116 HDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSIT-----------YMC 164
D ++ +FG+A T + VGT Y+ PE + +S +
Sbjct: 189 VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 248
Query: 165 DIYSFGVLL 173
D++S G +L
Sbjct: 249 DVWSLGCIL 257
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 27/117 (23%)
Query: 100 SGLEYLHMHQALVLLDHDMEARISEFGLAK-VFPEAHTHIT------------------- 139
SG+ + + A LL+ D ++ +FGLA+ + E T+I
Sbjct: 148 SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQ 207
Query: 140 -TSDVVGTAGYIAPE---YQQTLSITYMCDIYSFGVLLAEEMSLVKWMRNVMTSENP 192
TS VV T Y APE Q+ + T DI+S G + AE +++++ N T+ P
Sbjct: 208 LTSHVV-TRWYRAPELILLQE--NYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFP 261
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 20/129 (15%)
Query: 63 VYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMH-------QALVLLD 115
+Y M+ G++ LN + ++ +D R + + + +H H + L
Sbjct: 103 IYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 160
Query: 116 HDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSIT-----------YMC 164
D ++ +FG+A T + VGT Y+ PE + +S +
Sbjct: 161 VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 220
Query: 165 DIYSFGVLL 173
D++S G +L
Sbjct: 221 DVWSLGCIL 229
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 112 VLLDHDMEARISEFGLAKVFP-EAHTHITTSDVVGTAGYIAPEYQQTLSITYMCDIYSFG 170
+L+ D A + +FG+A E T + + VGT Y APE TY DIY+
Sbjct: 165 ILVSADDFAYLVDFGIASATTDEKLTQL--GNTVGTLYYXAPERFSESHATYRADIYALT 222
Query: 171 VLLAE 175
+L E
Sbjct: 223 CVLYE 227
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 20/129 (15%)
Query: 63 VYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMH-------QALVLLD 115
+Y M+ G++ LN + ++ +D R + + + +H H + L
Sbjct: 84 IYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 141
Query: 116 HDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSIT-----------YMC 164
D ++ +FG+A T + VGT Y+ PE + +S +
Sbjct: 142 VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 201
Query: 165 DIYSFGVLL 173
D++S G +L
Sbjct: 202 DVWSLGCIL 210
>pdb|1VBG|A Chain A, Pyruvate Phosphate Dikinase From Maize
pdb|1VBH|A Chain A, Pyruvate Phosphate Dikinase With Bound Mg-Pep From Maize
Length = 876
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 30/112 (26%)
Query: 40 GQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDV--SRGRRQLDWLARYRTV-- 95
G R + LP+ L P H EF+ G+++DI++++ G Q D LAR +
Sbjct: 608 GIFRAMDGLPVTIRLLDPPLH----EFLPEGNIEDIVSELCAETGANQEDALARIEKLSE 663
Query: 96 -------RGIASGLEYLHMHQALVLLDHDMEAR-ISEFGLA------KVFPE 133
RG G+ Y + + M+AR I E +A +VFPE
Sbjct: 664 VNPMLGFRGCRLGISYPELTE--------MQARAIFEAAIAMTNQGVQVFPE 707
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 20/129 (15%)
Query: 63 VYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMH-------QALVLLD 115
+Y M+ G++ LN + ++ +D R + + + +H H + L
Sbjct: 131 IYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 188
Query: 116 HDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSIT-----------YMC 164
D ++ +FG+A T + VGT Y+ PE + +S +
Sbjct: 189 VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 248
Query: 165 DIYSFGVLL 173
D++S G +L
Sbjct: 249 DVWSLGCIL 257
>pdb|2B98|A Chain A, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase
pdb|2B98|B Chain B, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase
pdb|2B98|C Chain C, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase
pdb|2B98|D Chain D, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase
pdb|2B98|E Chain E, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase
pdb|2B99|A Chain A, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase Complex With A Substrate Analog Inhibitor
pdb|2B99|B Chain B, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase Complex With A Substrate Analog Inhibitor
pdb|2B99|C Chain C, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase Complex With A Substrate Analog Inhibitor
pdb|2B99|D Chain D, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase Complex With A Substrate Analog Inhibitor
pdb|2B99|E Chain E, Crystal Structure Of An Archaeal Pentameric Riboflavin
Synthase Complex With A Substrate Analog Inhibitor
Length = 156
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 4 IRKIVQPPMDATALVEADSKLLTEEMMQIRSEIVTLGQIRHRNILPLLAHLARPGCHLLV 63
IRK V D L A KLL EE I ++ LG + AH A G L++
Sbjct: 35 IRKTVPGIKD---LPVACKKLLEEEGCDI---VMALGMPGKAEKDKVCAHEASLG--LML 86
Query: 64 YEFMKNGSLQDIL--NDVSRGRRQLDWLARYRT 94
+ M N + ++ D ++ ++LDWLA+ R
Sbjct: 87 AQLMTNKHIIEVFVHEDEAKDDKELDWLAKRRA 119
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 35 EIVTLGQIRHRNILPLLAHLARPGCHLLVYEFMKNGSLQDILNDVSRGRRQL-DWLARYR 93
EI L Q++H N++ LL R LV+E+ + +L+++ R +R + + L +
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT----VLHELDRYQRGVPEHLVKSI 107
Query: 94 TVRGIASGLEYLHMHQAL--------VLLDHDMEARISEFGLAKVFPEAHTHITTSDVVG 145
T + + + + + H H + +L+ ++ +FG A++ + D V
Sbjct: 108 TWQTLQA-VNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY--DDEVA 164
Query: 146 TAGYIAPE-YQQTLSITYMCDIYSFGVLLAEEMSLV 180
T Y +PE D+++ G + AE +S V
Sbjct: 165 TRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGV 200
>pdb|1ZWK|A Chain A, Structure Of Wrba From Pseudomonas Aeruginosa
pdb|1ZWK|B Chain B, Structure Of Wrba From Pseudomonas Aeruginosa
pdb|1ZWL|A Chain A, Structure Of Wrba From Pseudomonas Aeruginosa In Complex
With Fmn
Length = 207
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 25/41 (60%)
Query: 60 HLLVYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIAS 100
++LV + ++G+ ++ ++RG Q + AR RTV +++
Sbjct: 14 YILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPAVST 54
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 26.9 bits (58), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 20/129 (15%)
Query: 63 VYEFMKNGSLQDILNDVSRGRRQLDWLARYRTVRGIASGLEYLHMH-------QALVLLD 115
+Y M+ G++ LN + ++ +D R + + + +H H + L
Sbjct: 103 IYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 160
Query: 116 HDMEARISEFGLAKVFPEAHTHITTSDVVGTAGYIAPEYQQTLSIT-----------YMC 164
D ++ +FG+A + VGT Y+ PE + +S +
Sbjct: 161 VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 220
Query: 165 DIYSFGVLL 173
D++S G +L
Sbjct: 221 DVWSLGCIL 229
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,521,988
Number of Sequences: 62578
Number of extensions: 246903
Number of successful extensions: 1887
Number of sequences better than 100.0: 811
Number of HSP's better than 100.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 591
Number of HSP's that attempted gapping in prelim test: 1247
Number of HSP's gapped (non-prelim): 824
length of query: 238
length of database: 14,973,337
effective HSP length: 96
effective length of query: 142
effective length of database: 8,965,849
effective search space: 1273150558
effective search space used: 1273150558
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.9 bits)