BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041662
(70 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224089458|ref|XP_002308724.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222854700|gb|EEE92247.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 121
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 51/64 (79%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
S +TIPVNVG+VLD KIALSCINM+LSDFY S+ YKTRL+LNTRDSK DV+ A
Sbjct: 6 STTSTIPVNVGVVLDFASLGAKIALSCINMALSDFYASHGDYKTRLVLNTRDSKKDVIGA 65
Query: 62 AAAE 65
AAAE
Sbjct: 66 AAAE 69
>gi|296083771|emb|CBI23988.3| unnamed protein product [Vitis vinifera]
Length = 146
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 53/64 (82%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
S+NTTIPV VG+VLD++ GK+ LSCI+M+LSDFY S+ HYKTRL+L RDSK DVV A
Sbjct: 4 SRNTTIPVKVGVVLDMDTWLGKMGLSCISMALSDFYASHGHYKTRLVLEIRDSKRDVVGA 63
Query: 62 AAAE 65
AAA+
Sbjct: 64 AAAD 67
>gi|224142037|ref|XP_002324365.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222865799|gb|EEF02930.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 901
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/66 (66%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 2 SKNTTIPVNVGLVLDINGE-DGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
++NT+IPVNVG+VLD++ + DGKIALSCI M+LSDFY ++ YKTRL+LNTRDS DVV
Sbjct: 25 AENTSIPVNVGVVLDLDSDLDGKIALSCIEMALSDFYATHGDYKTRLVLNTRDSMKDVVG 84
Query: 61 AAAAEI 66
AAAA +
Sbjct: 85 AAAAAL 90
>gi|296083775|emb|CBI23992.3| unnamed protein product [Vitis vinifera]
Length = 990
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/69 (62%), Positives = 55/69 (79%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++NTTIPVNVG+VLD + GK+ LSCI M+LSDFY S+ +YKTRL+L TRDS+ DVV A
Sbjct: 27 AQNTTIPVNVGVVLDFDTSFGKMGLSCIPMALSDFYASHGNYKTRLVLKTRDSRRDVVGA 86
Query: 62 AAAEILIDQ 70
AAA + + Q
Sbjct: 87 AAAALDLIQ 95
>gi|359476446|ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
Length = 983
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/69 (62%), Positives = 55/69 (79%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++NTTIPVNVG+VLD + GK+ LSCI M+LSDFY S+ +YKTRL+L TRDS+ DVV A
Sbjct: 27 AQNTTIPVNVGVVLDFDTSFGKMGLSCIPMALSDFYASHGNYKTRLVLKTRDSRRDVVGA 86
Query: 62 AAAEILIDQ 70
AAA + + Q
Sbjct: 87 AAAALDLIQ 95
>gi|359476409|ref|XP_003631832.1| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
Length = 107
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 52/63 (82%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++NTTIPVNVG+VLD + GK+ LSCI M+LSDFY S+ +YKTRL+L TRDS+ DVV A
Sbjct: 27 AQNTTIPVNVGVVLDFDTSFGKMGLSCIPMALSDFYASHGNYKTRLVLKTRDSRRDVVGA 86
Query: 62 AAA 64
AAA
Sbjct: 87 AAA 89
>gi|147787550|emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]
Length = 960
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/69 (62%), Positives = 55/69 (79%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++NTTIPVNVG+VLD + GK+ LSCI M+LSDFY S+ +YKTRL+L TRDS+ DVV A
Sbjct: 27 AQNTTIPVNVGVVLDFDTSFGKMGLSCIPMALSDFYASHGNYKTRLVLKTRDSRRDVVGA 86
Query: 62 AAAEILIDQ 70
AAA + + Q
Sbjct: 87 AAAALDLIQ 95
>gi|224089454|ref|XP_002308723.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222854699|gb|EEE92246.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 866
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 2/67 (2%)
Query: 2 SKNTT--IPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVV 59
++NTT IPVNVG+VLD+ + IALSCINM+LSDFY S+ YKTRL+LNTRDSK DV+
Sbjct: 4 AQNTTSSIPVNVGVVLDLASLEANIALSCINMALSDFYASHGDYKTRLVLNTRDSKKDVI 63
Query: 60 AAAAAEI 66
AAAA +
Sbjct: 64 GAAAAAL 70
>gi|255543941|ref|XP_002513033.1| glutamate receptor 2 plant, putative [Ricinus communis]
gi|223548044|gb|EEF49536.1| glutamate receptor 2 plant, putative [Ricinus communis]
Length = 1005
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/65 (63%), Positives = 54/65 (83%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++NT + V+VG++LD + G+I LSCINMSLSDFY ++SH+KTRLLL+TRDSK DVV A
Sbjct: 30 AQNTKVSVDVGVILDYDRWVGRIGLSCINMSLSDFYATHSHFKTRLLLHTRDSKEDVVGA 89
Query: 62 AAAEI 66
AAA +
Sbjct: 90 AAAAL 94
>gi|224112317|ref|XP_002332797.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222834796|gb|EEE73259.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 854
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/66 (63%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 2 SKNTTIPVNVGLVLDINGE-DGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
++NT+IPV+VG+VLD+ + DG+IALSCI M+LSDFY ++ YKTRL+LNTRDS DVV
Sbjct: 26 AENTSIPVSVGVVLDLESDLDGRIALSCIEMALSDFYATHGDYKTRLVLNTRDSMKDVVG 85
Query: 61 AAAAEI 66
AAAA +
Sbjct: 86 AAAAAL 91
>gi|224142053|ref|XP_002324373.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222865807|gb|EEF02938.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 915
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/66 (63%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 2 SKNTTIPVNVGLVLDINGE-DGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
++NT+IPVNVG+VLD++ + DG+IALSCI M+LSDFY ++ YKTRL L TRDS DVV
Sbjct: 4 AENTSIPVNVGVVLDLDSDLDGRIALSCIEMALSDFYATHGDYKTRLALTTRDSMKDVVG 63
Query: 61 AAAAEI 66
AAAA +
Sbjct: 64 AAAAAL 69
>gi|224112305|ref|XP_002332794.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222834793|gb|EEE73256.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 901
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/66 (63%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 2 SKNTTIPVNVGLVLDINGE-DGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
++NT+IPVNVG+VLD++ + DG+IALSCI M+LSDFY ++ YKTRL L TRDS DVV
Sbjct: 25 AENTSIPVNVGVVLDLDSDLDGRIALSCIEMALSDFYATHGDYKTRLALTTRDSMKDVVG 84
Query: 61 AAAAEI 66
AAAA +
Sbjct: 85 AAAAAL 90
>gi|147775716|emb|CAN71568.1| hypothetical protein VITISV_015645 [Vitis vinifera]
Length = 941
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 48/59 (81%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
S+NTTIPV VG+VLD++ GK+ LSCI+M+LSDFY S+ HYKTRL+L RDSK DVV
Sbjct: 4 SRNTTIPVKVGVVLDMDTWLGKMGLSCISMALSDFYXSHGHYKTRLVLEIRDSKRDVVG 62
>gi|296083765|emb|CBI23982.3| unnamed protein product [Vitis vinifera]
Length = 68
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++NTTIPV VG+VLD++ GK+ LSCI+M+LSD Y S+ HYKTR++ RDSK DVV A
Sbjct: 2 AQNTTIPVKVGVVLDLDTLVGKMGLSCISMALSDLYASHGHYKTRVVTKIRDSKRDVVGA 61
Query: 62 AAAEI 66
AAA +
Sbjct: 62 AAAAL 66
>gi|255548636|ref|XP_002515374.1| glutamate receptor 2 plant, putative [Ricinus communis]
gi|223545318|gb|EEF46823.1| glutamate receptor 2 plant, putative [Ricinus communis]
Length = 918
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++N TI VNVG+VLD+ GK+ LSCINM+L DFY S +HY+TRL+LN RDSK DV+ A
Sbjct: 4 AQNKTIQVNVGVVLDLEDWVGKMELSCINMALLDFYASYNHYQTRLVLNIRDSKRDVIGA 63
Query: 62 AAAEI 66
AAA +
Sbjct: 64 AAAAL 68
>gi|359476442|ref|XP_002271013.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
Length = 920
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 47/59 (79%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
S+NTTIPV VG+VLD++ GK+ LSCI M+LSDFY S+ HYKTRL+L RDSK DVV
Sbjct: 28 SQNTTIPVKVGVVLDMDTWLGKMGLSCITMALSDFYASHGHYKTRLVLEIRDSKRDVVG 86
>gi|296083773|emb|CBI23990.3| unnamed protein product [Vitis vinifera]
Length = 1727
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 47/59 (79%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
S+NTTIPV VG+VLD++ GK+ LSCI M+LSDFY S+ HYKTRL+L RDSK DVV
Sbjct: 835 SQNTTIPVKVGVVLDMDTWLGKMGLSCITMALSDFYASHGHYKTRLVLEIRDSKRDVVG 893
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 22 GKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
GK+ LSCI+M+LSDFY S+ HYKTRL+ R+SK DVV
Sbjct: 6 GKMGLSCISMALSDFYASHGHYKTRLVPEIRNSKRDVVG 44
>gi|296083780|emb|CBI23997.3| unnamed protein product [Vitis vinifera]
Length = 1316
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/62 (62%), Positives = 50/62 (80%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++NTTIPV VG+VLD++ GK+ LSCI+M+LSDFY S+ HYKTR++ RDSK DV AA
Sbjct: 2 AQNTTIPVKVGVVLDLDTWIGKMGLSCISMALSDFYASHGHYKTRVVTKIRDSKRDVGAA 61
Query: 62 AA 63
AA
Sbjct: 62 AA 63
>gi|359476438|ref|XP_003631839.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 2.3-like
[Vitis vinifera]
Length = 600
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 48/59 (81%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
S+NTTIPV VG+VLD++ GK+ LSCI+M+LSDFY S+ HYKTRL+L RDSK DVV
Sbjct: 4 SRNTTIPVKVGVVLDMDTWLGKMGLSCISMALSDFYASHGHYKTRLVLEIRDSKRDVVG 62
>gi|224112325|ref|XP_002332799.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222834798|gb|EEE73261.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 104
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 2 SKNT-TIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
++NT TIPVNVG+VLD+ G I L+CINM+LSDFY S+S YKTRL+L TR+S DVV
Sbjct: 29 AQNTATIPVNVGVVLDLEFSGGNIGLTCINMALSDFYASHSDYKTRLVLTTRNSGNDVVR 88
Query: 61 AAAAEILIDQ 70
AAAA L D
Sbjct: 89 AAAAGSLSDP 98
>gi|224161032|ref|XP_002338287.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222871733|gb|EEF08864.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 96
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 5 TTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVV 59
+TIPVNVG+VLD+ D IALSCINM+LSDFY S+ YKTRL+LNTRDSK DV+
Sbjct: 9 STIPVNVGVVLDLASLDANIALSCINMALSDFYASHGDYKTRLVLNTRDSKKDVI 63
>gi|359476450|ref|XP_002271672.2| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
Length = 1270
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/62 (62%), Positives = 50/62 (80%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++NTTIPV VG+VLD++ GK+ LSCI+M+LSDFY S+ HYKTR++ RDSK DV AA
Sbjct: 2 AQNTTIPVKVGVVLDLDTWIGKMGLSCISMALSDFYASHGHYKTRVVTKIRDSKRDVGAA 61
Query: 62 AA 63
AA
Sbjct: 62 AA 63
>gi|224142057|ref|XP_002324375.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222865809|gb|EEF02940.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 843
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/62 (66%), Positives = 48/62 (77%)
Query: 5 TTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAA 64
T+IPVNVG+VLD+ D IALSCINM+LSDFY + YKTRL+L RDSK DVV AAAA
Sbjct: 24 TSIPVNVGVVLDLEYFDVNIALSCINMALSDFYATRGDYKTRLVLAIRDSKKDVVGAAAA 83
Query: 65 EI 66
+
Sbjct: 84 AL 85
>gi|296083760|emb|CBI23977.3| unnamed protein product [Vitis vinifera]
Length = 1834
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/59 (64%), Positives = 47/59 (79%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
S+NTTIPV VG+VLD++ GK+ LSCI+M+LSDFY S+ HYKTRL+L RDS DVV
Sbjct: 4 SRNTTIPVKVGVVLDMDTWLGKMGLSCISMALSDFYASHGHYKTRLVLEIRDSNRDVVG 62
Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 48/59 (81%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
++NTTIPV VG+VLD++ GK+ LSCI+M+LSDFY S+ HYKTRL+L RDSK DV+
Sbjct: 1328 AQNTTIPVKVGVVLDMDTWLGKMGLSCISMALSDFYASHGHYKTRLVLEIRDSKRDVMG 1386
>gi|359476434|ref|XP_003631838.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
Length = 941
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 38/59 (64%), Positives = 47/59 (79%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
S+NTTIPV VG+VLD++ GK+ LSCI+M+LSDFY S+ HYKTRL+L RDS DVV
Sbjct: 4 SRNTTIPVKVGVVLDMDTWLGKMGLSCISMALSDFYASHGHYKTRLVLEIRDSNRDVVG 62
>gi|255548642|ref|XP_002515377.1| glutamate receptor 2 plant, putative [Ricinus communis]
gi|223545321|gb|EEF46826.1| glutamate receptor 2 plant, putative [Ricinus communis]
Length = 961
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/65 (60%), Positives = 50/65 (76%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++N T+ VNVG+VLD+ + K LSCINM+LSDFY +N HYKTRL+L TR+S DVV A
Sbjct: 26 AQNATVSVNVGVVLDLENLESKKWLSCINMALSDFYATNGHYKTRLVLYTRNSMEDVVGA 85
Query: 62 AAAEI 66
AAA +
Sbjct: 86 AAAAL 90
>gi|359476448|ref|XP_002273232.2| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
Length = 1056
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/59 (64%), Positives = 47/59 (79%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
S+NTTIPV VG+VLD++ GK+ LSCI M+LSDFY S+ HYKTRL+L RDSK DV+
Sbjct: 28 SQNTTIPVKVGVVLDMDTWLGKMGLSCITMALSDFYASHGHYKTRLVLEIRDSKRDVMG 86
>gi|255548640|ref|XP_002515376.1| glutamate receptor 2 plant, putative [Ricinus communis]
gi|223545320|gb|EEF46825.1| glutamate receptor 2 plant, putative [Ricinus communis]
Length = 633
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++NTT+ VNVG+VLD+ GK LSCI M+LSDFY +NSHYK RL+ +TR+S DVV A
Sbjct: 4 AQNTTMLVNVGVVLDLEHLAGKKGLSCIKMALSDFYATNSHYKPRLVRHTRNSMEDVVGA 63
Query: 62 AAAEIL 67
AAA ++
Sbjct: 64 AAAALI 69
>gi|224142043|ref|XP_002324368.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222865802|gb|EEF02933.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 885
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 48/61 (78%)
Query: 6 TIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAE 65
TIPVNVG+VLD+ G I L+CINM+LSDFY ++S YKTRL+L TR+S DVV AAAA
Sbjct: 1 TIPVNVGVVLDLEFSGGNIDLTCINMALSDFYATHSDYKTRLVLTTRNSGNDVVRAAAAA 60
Query: 66 I 66
+
Sbjct: 61 L 61
>gi|255548632|ref|XP_002515372.1| glutamate receptor 2 plant, putative [Ricinus communis]
gi|223545316|gb|EEF46821.1| glutamate receptor 2 plant, putative [Ricinus communis]
Length = 971
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/65 (56%), Positives = 52/65 (80%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++NTTI VN+G+VLD++ GK+ LSCI+++LSDFY ++ +Y+TRL L TRDS DVV A
Sbjct: 30 AQNTTILVNIGVVLDMDSSVGKMGLSCIDLALSDFYATHGYYRTRLALKTRDSMRDVVGA 89
Query: 62 AAAEI 66
AAA +
Sbjct: 90 AAAAL 94
>gi|147864971|emb|CAN83624.1| hypothetical protein VITISV_010871 [Vitis vinifera]
Length = 100
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 51/66 (77%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++NTTIPVNVGLVLD + GK+ L+CI ++LSDFY S+ +YKT +L TRDS+ DV AA
Sbjct: 27 AQNTTIPVNVGLVLDFDTSLGKMGLTCIPLALSDFYASHGNYKTSHVLKTRDSRRDVGAA 86
Query: 62 AAAEIL 67
AA ++
Sbjct: 87 AAGTLI 92
>gi|359476440|ref|XP_002270936.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
Length = 707
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 47/59 (79%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
++NTTIPV VG+VLD++ GK+ LSCI+M+LSDFY S+ HYKTR++ RDSK DVV
Sbjct: 28 AQNTTIPVKVGVVLDLDTWVGKMGLSCISMALSDFYASHGHYKTRVVTKVRDSKRDVVG 86
>gi|296083772|emb|CBI23989.3| unnamed protein product [Vitis vinifera]
Length = 776
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 47/59 (79%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
++NTTIPV VG+VLD++ GK+ LSCI+M+LSDFY S+ HYKTR++ RDSK DVV
Sbjct: 121 AQNTTIPVKVGVVLDLDTWVGKMGLSCISMALSDFYASHGHYKTRVVTKVRDSKRDVVG 179
>gi|224142027|ref|XP_002324361.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222865795|gb|EEF02926.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 856
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 5 TTIPVNVGLVLDINGE-DGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAA 63
T+IPVNVG+VLD++ G I LSCINM+LSDFY S+S YKTRL+L T DSK DVV AAA
Sbjct: 30 TSIPVNVGVVLDLDDVLYGNIGLSCINMALSDFYASHSDYKTRLVLTTIDSKRDVVGAAA 89
Query: 64 AEI 66
A +
Sbjct: 90 AAL 92
>gi|296083758|emb|CBI23975.3| unnamed protein product [Vitis vinifera]
Length = 919
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 47/59 (79%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
S+NTTIPV VG+VL+++ GK+ LSCI+M+LSDFY S+ HYKTRL+ RDSK DVV
Sbjct: 28 SQNTTIPVKVGVVLNMDTWLGKMGLSCISMALSDFYASHGHYKTRLVPEIRDSKRDVVG 86
>gi|225464311|ref|XP_002269290.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
Length = 916
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 47/59 (79%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
S+NTTIPV VG+VL+++ GK+ LSCI+M+LSDFY S+ HYKTRL+ RDSK DVV
Sbjct: 2 SQNTTIPVKVGVVLNMDTWLGKMGLSCISMALSDFYASHGHYKTRLVPEIRDSKRDVVG 60
>gi|147861120|emb|CAN80457.1| hypothetical protein VITISV_040422 [Vitis vinifera]
Length = 957
Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 47/59 (79%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
S+NTTIPV VG+VL+++ GK+ LSCI+M+LSDFY S+ HYKTRL+ RDSK DVV
Sbjct: 28 SQNTTIPVKVGVVLNMDTWLGKMGLSCISMALSDFYASHGHYKTRLVPEIRDSKRDVVG 86
>gi|147862702|emb|CAN79326.1| hypothetical protein VITISV_017673 [Vitis vinifera]
Length = 875
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 47/59 (79%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
S+NTTIPV VG+VLD++ GK+ LSCI+M+LS+FY S+ HYKTRL+L RDS DVV
Sbjct: 4 SQNTTIPVKVGVVLDMDTWLGKMGLSCISMALSEFYASHGHYKTRLVLEIRDSNRDVVG 62
>gi|449489402|ref|XP_004158301.1| PREDICTED: glutamate receptor 2.7-like [Cucumis sativus]
Length = 970
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/65 (55%), Positives = 51/65 (78%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
+ ++T+PVNVG+VLD+ GK+ LSCI+MSLS+FY+ N HY TR++L+ +DS DVV A
Sbjct: 33 ASSSTVPVNVGVVLDMESWIGKMGLSCIDMSLSEFYSLNPHYHTRIVLHPKDSGRDVVGA 92
Query: 62 AAAEI 66
AAA +
Sbjct: 93 AAAAL 97
>gi|449453069|ref|XP_004144281.1| PREDICTED: glutamate receptor 2.7-like [Cucumis sativus]
Length = 970
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/65 (55%), Positives = 51/65 (78%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
+ ++T+PVNVG+VLD+ GK+ LSCI+MSLS+FY+ N HY TR++L+ +DS DVV A
Sbjct: 33 ASSSTVPVNVGVVLDMESWIGKMGLSCIDMSLSEFYSLNPHYHTRIVLHPKDSGRDVVGA 92
Query: 62 AAAEI 66
AAA +
Sbjct: 93 AAAAL 97
>gi|296083779|emb|CBI23996.3| unnamed protein product [Vitis vinifera]
Length = 75
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++NT IPVN G+VLD + GK+ LSCI ++LSDFY S+ +YKTRL+L TRDS+ DVV
Sbjct: 4 AQNTAIPVNAGVVLDFDTSLGKMGLSCIPLALSDFYASHGNYKTRLVLKTRDSRRDVVGT 63
Query: 62 AAA 64
A+
Sbjct: 64 TAS 66
>gi|359476436|ref|XP_002266216.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
Length = 927
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
S+NTTIPV VG+VLD++ K+ L CI+M+LS+FY S+ HYKTRL+L RDSK DVV
Sbjct: 4 SRNTTIPVKVGVVLDMDTWLAKMGLRCISMALSEFYASHGHYKTRLVLEIRDSKRDVVG 62
>gi|296083766|emb|CBI23983.3| unnamed protein product [Vitis vinifera]
Length = 1772
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
S+NTTIPV VG+VLD++ K+ L CI+M+LS+FY S+ HYKTRL+L RDSK DVV
Sbjct: 837 SRNTTIPVKVGVVLDMDTWLAKMGLRCISMALSEFYASHGHYKTRLVLEIRDSKRDVVG 895
>gi|147777956|emb|CAN62891.1| hypothetical protein VITISV_032493 [Vitis vinifera]
Length = 979
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/69 (59%), Positives = 53/69 (76%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++NTTIPV VG+VLD++ GK+ LSCI+M+LSDFY + HYKTRL+ RDSK DVV A
Sbjct: 4 AQNTTIPVKVGVVLDMDTWLGKMGLSCISMALSDFYAYHGHYKTRLIPKIRDSKRDVVGA 63
Query: 62 AAAEILIDQ 70
AAA + + Q
Sbjct: 64 AAAALYLLQ 72
>gi|359476432|ref|XP_002268958.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
Length = 1001
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/69 (59%), Positives = 53/69 (76%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++NTTIPV VG+VLD++ GK+ LSCI+M+LSDFY + HYKTRL+ RDSK DVV A
Sbjct: 26 AQNTTIPVKVGVVLDMDTWLGKMGLSCISMALSDFYAYHGHYKTRLIPKIRDSKRDVVGA 85
Query: 62 AAAEILIDQ 70
AAA + + Q
Sbjct: 86 AAAALYLLQ 94
>gi|296083756|emb|CBI23973.3| unnamed protein product [Vitis vinifera]
Length = 1842
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/69 (59%), Positives = 53/69 (76%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++NTTIPV VG+VLD++ GK+ LSCI+M+LSDFY + HYKTRL+ RDSK DVV A
Sbjct: 867 AQNTTIPVKVGVVLDMDTWLGKMGLSCISMALSDFYAYHGHYKTRLIPKIRDSKRDVVGA 926
Query: 62 AAAEILIDQ 70
AAA + + Q
Sbjct: 927 AAAALYLLQ 935
>gi|296083762|emb|CBI23979.3| unnamed protein product [Vitis vinifera]
Length = 518
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/59 (59%), Positives = 46/59 (77%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
++NTTIPV VG+VLD++ GK+ LSCI+M+LSD Y S+ HYKTR++ RDSK DVV
Sbjct: 2 AQNTTIPVKVGVVLDLDTWVGKMGLSCISMALSDLYASHGHYKTRVVTKIRDSKRDVVG 60
>gi|147772253|emb|CAN71680.1| hypothetical protein VITISV_015842 [Vitis vinifera]
Length = 103
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 48/65 (73%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++NTTIPVNVGLVLD + GK+ L+CI M+L DFY S+ +YKT +LNTRDS+ DV A
Sbjct: 4 AQNTTIPVNVGLVLDFDTSLGKMGLTCIPMALLDFYASHGNYKTSHVLNTRDSRRDVGVA 63
Query: 62 AAAEI 66
A I
Sbjct: 64 ATDPI 68
>gi|357465943|ref|XP_003603256.1| Glutamate receptor 2.8 [Medicago truncatula]
gi|355492304|gb|AES73507.1| Glutamate receptor 2.8 [Medicago truncatula]
Length = 990
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 1 TSKNTTIPVNVGLVLDI--NGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDV 58
T + I V VG V+D+ NG GKI LSCINMSLSDFY S+SHYKTR+ L RDS DV
Sbjct: 31 TKNESNIVVKVGAVIDVSSNGTVGKIGLSCINMSLSDFYLSHSHYKTRIQLILRDSHKDV 90
Query: 59 VAAAA 63
V+AAA
Sbjct: 91 VSAAA 95
>gi|147852351|emb|CAN80118.1| hypothetical protein VITISV_005870 [Vitis vinifera]
Length = 978
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
+NTTIPV VG+VLD++ GK+ LSCI+M+LSD Y S+ HYKTR++ RDSK DVV
Sbjct: 29 QNTTIPVKVGVVLDLDTWVGKMGLSCISMALSDLYASHGHYKTRVVTKIRDSKRDVVG 86
>gi|357465941|ref|XP_003603255.1| Glutamate receptor 2.8 [Medicago truncatula]
gi|355492303|gb|AES73506.1| Glutamate receptor 2.8 [Medicago truncatula]
Length = 1057
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 49/65 (75%), Gaps = 3/65 (4%)
Query: 2 SKNTT-IPVNVGLVLDINGED--GKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDV 58
SKN + I V VG V+DI+ + GKI LSCINMSLSDFY S+SHYKTR+ L RDS DV
Sbjct: 28 SKNESNIVVKVGAVIDISSNETVGKIGLSCINMSLSDFYLSHSHYKTRIQLIVRDSHRDV 87
Query: 59 VAAAA 63
VAAAA
Sbjct: 88 VAAAA 92
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 49/65 (75%), Gaps = 3/65 (4%)
Query: 2 SKNTT-IPVNVGLVLDINGED--GKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDV 58
SKN + I V VG V+DI+ + GKI LSCINMSLSDFY S+SHYKTR+ L RDS DV
Sbjct: 104 SKNESNIVVKVGAVIDISSNETVGKIGLSCINMSLSDFYLSHSHYKTRIQLIVRDSHRDV 163
Query: 59 VAAAA 63
VAAAA
Sbjct: 164 VAAAA 168
>gi|225464317|ref|XP_002270975.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
Length = 926
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
+NT IPV VG+VLD++ GK+ LSCI+M+LSDFY S+ HYKTRL+ R+SK DVV
Sbjct: 3 QNTKIPVKVGVVLDMDTWLGKMGLSCISMALSDFYASHGHYKTRLVPEIRNSKRDVVG 60
>gi|359476430|ref|XP_002268837.2| PREDICTED: glutamate receptor 2.7-like, partial [Vitis vinifera]
Length = 953
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 47/59 (79%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
++NTTIPV VG+VLD++ GK+ LSCI+M+LSD+Y S+ HYKTR++ RDS+ DVV
Sbjct: 6 AQNTTIPVKVGVVLDLDTWVGKMGLSCISMALSDWYASHGHYKTRVITKIRDSQRDVVG 64
>gi|147772249|emb|CAN71676.1| hypothetical protein VITISV_015838 [Vitis vinifera]
Length = 1352
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
+NT IPV VG+VLD++ GK+ LSCI+M+LSDFY S+ HYKTRL+ R+SK DVV
Sbjct: 425 QNTKIPVKVGVVLDMDTWLGKMGLSCISMALSDFYASHGHYKTRLVPEIRNSKRDVVG 482
>gi|147859199|emb|CAN81029.1| hypothetical protein VITISV_020535 [Vitis vinifera]
Length = 971
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/54 (62%), Positives = 44/54 (81%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSK 55
++NTTIPV VG+VLD++ GK+ LSCI+M+LSDFY S+ HYKTRL+ RDSK
Sbjct: 28 AQNTTIPVKVGVVLDLDTWVGKMGLSCISMALSDFYASHGHYKTRLVPKIRDSK 81
>gi|158578540|gb|ABW74565.1| glutamate receptor [Boechera divaricarpa]
Length = 746
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/66 (57%), Positives = 46/66 (69%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAA 62
KN T +NVG+VLD+N KI L+ INMSLSDFY + Y+TRL L+ RDS D V A+
Sbjct: 22 KNQTSEINVGVVLDLNTTFSKICLTSINMSLSDFYEDHPSYRTRLTLHVRDSMEDTVQAS 81
Query: 63 AAEILI 68
AAEI I
Sbjct: 82 AAEIPI 87
>gi|255543945|ref|XP_002513035.1| electron transporter, putative [Ricinus communis]
gi|223548046|gb|EEF49538.1| electron transporter, putative [Ricinus communis]
Length = 268
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/64 (60%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 2 SKNTTIPVNVGLVL-DINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
++NT IPV VG+VL D + GK+ L CINMSL DF ++ HYKTRL+L+TRDS GDV A
Sbjct: 183 AQNTIIPVKVGVVLYDSDDCVGKMQLPCINMSLLDFNANHGHYKTRLVLHTRDSNGDVGA 242
Query: 61 AAAA 64
AAA
Sbjct: 243 AAAG 246
>gi|224142049|ref|XP_002324371.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222865805|gb|EEF02936.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 883
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Query: 9 VNVGLVLDINGE-DGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDV 58
VNVG+VLD + + DGKI LSCINMSLSDFY+++ YKTRL+L TRDSK DV
Sbjct: 1 VNVGVVLDFDNDLDGKIGLSCINMSLSDFYDTHGDYKTRLVLITRDSKNDV 51
>gi|255548644|ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinus communis]
gi|223545322|gb|EEF46827.1| glutamate receptor 2 plant, putative [Ricinus communis]
Length = 931
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/53 (60%), Positives = 42/53 (79%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDS 54
++NT + VN+G+VLD+ GK LSCINM+LSDFY N HY+TRL+LNTR+S
Sbjct: 2 AQNTAVSVNIGVVLDLEHLAGKKGLSCINMALSDFYAINGHYRTRLVLNTRNS 54
>gi|224142035|ref|XP_002324364.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222865798|gb|EEF02929.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 869
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Query: 9 VNVGLVLDINGE-DGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDV 58
+NVG+VLD + + DGKI LSCINMSLSDFY+++ YKTRL+L TRDSK DV
Sbjct: 1 MNVGVVLDFDNDLDGKIGLSCINMSLSDFYDTHGDYKTRLVLITRDSKNDV 51
>gi|147797803|emb|CAN67434.1| hypothetical protein VITISV_021882 [Vitis vinifera]
Length = 128
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++NT IPVN G+VLD + GK+ LSCI ++LSDFY S+ +YK RL+L TRDS+ DV
Sbjct: 27 AQNTAIPVNAGVVLDFDTSLGKMGLSCIPLALSDFYASHGNYKARLVLKTRDSR-DVGTT 85
Query: 62 AA 63
AA
Sbjct: 86 AA 87
>gi|158578537|gb|ABW74562.1| glutamate receptor 1 [Boechera divaricarpa]
Length = 921
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 45/65 (69%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAA 62
+N T + VG+VLD+ + KI L+ INMSLSDFY NS+Y TRL+ + RDS DVV A+
Sbjct: 7 QNQTREIKVGVVLDLQTKFSKICLTAINMSLSDFYKDNSNYSTRLVFHVRDSMEDVVQAS 66
Query: 63 AAEIL 67
AA L
Sbjct: 67 AAAAL 71
>gi|224117598|ref|XP_002331676.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222874095|gb|EEF11226.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 748
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+ VG+VLD+N GK A SCI+ +++DFY N+ Y+TR+ L TRDSKGDVV AA+A +
Sbjct: 6 IRVGVVLDMNSAVGKTAESCISAAVNDFYARNADYRTRISLVTRDSKGDVVTAASAAL 63
>gi|297825467|ref|XP_002880616.1| ATGLR2.2 [Arabidopsis lyrata subsp. lyrata]
gi|297326455|gb|EFH56875.1| ATGLR2.2 [Arabidopsis lyrata subsp. lyrata]
Length = 904
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 4 NTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAA 63
N VNVG+V D+ ++++ CINMSL+DFY+S ++TRL++N DSK DVV AA
Sbjct: 26 NGKTQVNVGVVTDVGTSHSEVSMLCINMSLTDFYSSRPQFQTRLVVNVGDSKNDVVGAAT 85
Query: 64 AEI 66
A I
Sbjct: 86 AAI 88
>gi|356519814|ref|XP_003528564.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 2.9-like
[Glycine max]
Length = 823
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 7 IPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAA--AA 64
IP+ +G+VLD+N G ++ SCI M+ DFY + HYKTRL L TRDS+ +VV AA A
Sbjct: 6 IPIPIGIVLDLNSSIGSMSNSCIWMAYQDFYERHPHYKTRLALQTRDSRDNVVTAASVAQ 65
Query: 65 EIL 67
E+L
Sbjct: 66 ELL 68
>gi|255543943|ref|XP_002513034.1| glutamate receptor 2 plant, putative [Ricinus communis]
gi|223548045|gb|EEF49537.1| glutamate receptor 2 plant, putative [Ricinus communis]
Length = 894
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 2 SKNTTIPVNVGLVLDINGED--GKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVV 59
+ N V +G+VLD++ ++ GKI LSCI M++SDFY +SHYKTRL+++ RDS DVV
Sbjct: 4 ANNKPSQVKIGVVLDLDDDNCCGKIGLSCITMAVSDFYTIHSHYKTRLVIDIRDSNRDVV 63
Query: 60 AAAAAEI 66
AA A +
Sbjct: 64 LAATAAM 70
>gi|297825459|ref|XP_002880612.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297326451|gb|EFH56871.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 919
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 43/63 (68%)
Query: 4 NTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAA 63
N VNVG+V D+ +A+ CINMSL+DFY+S ++TRL++N DSK DVV AA+
Sbjct: 28 NGRTKVNVGVVTDVGTSYSDVAMLCINMSLADFYSSRPQFQTRLVVNVGDSKEDVVGAAS 87
Query: 64 AEI 66
A I
Sbjct: 88 AAI 90
>gi|41017232|sp|Q9LFN8.2|GLR26_ARATH RecName: Full=Glutamate receptor 2.6; AltName: Full=Ligand-gated
ion channel 2.6; Flags: Precursor
Length = 967
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
S+ + V VG+VLD N ++L INMSLS+FYN+++ +KTR++LN RDSK VV A
Sbjct: 29 SQQEVLQVQVGIVLDTNATLAALSLRAINMSLSEFYNTHNGFKTRIVLNIRDSKRTVVGA 88
Query: 62 AAAEILI 68
AA+ + +
Sbjct: 89 AASALYL 95
>gi|449442140|ref|XP_004138840.1| PREDICTED: glutamate receptor 2.7-like [Cucumis sativus]
Length = 879
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 7 IPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+ V VG+VLD + + GK+ LSCI+M+LSDFY S SH+KTR++L DS G VV AAAA +
Sbjct: 41 LKVKVGVVLD-SDDYGKVDLSCISMALSDFYASRSHFKTRVVLKPMDSNGTVVDAAAAAL 99
>gi|15238975|ref|NP_196679.1| glutamate receptor 2.6 [Arabidopsis thaliana]
gi|8953380|emb|CAB96653.1| putative protein [Arabidopsis thaliana]
gi|332004260|gb|AED91643.1| glutamate receptor 2.6 [Arabidopsis thaliana]
Length = 906
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
S+ + V VG+VLD N ++L INMSLS+FYN+++ +KTR++LN RDSK VV A
Sbjct: 29 SQQEVLQVQVGIVLDTNATLAALSLRAINMSLSEFYNTHNGFKTRIVLNIRDSKRTVVGA 88
Query: 62 AAAEILI 68
AA+ + +
Sbjct: 89 AASALYL 95
>gi|15224608|ref|NP_180048.1| glutamate receptor 2.2 [Arabidopsis thaliana]
gi|41017239|sp|Q9SHV1.1|GLR22_ARATH RecName: Full=Glutamate receptor 2.2; AltName: Full=Ligand-gated
ion channel 2.2; Flags: Precursor
gi|4646232|gb|AAD26895.1| putative ligand-gated ion channel protein [Arabidopsis thaliana]
gi|21684648|gb|AAL61997.1| putative glutamate receptor protein [Arabidopsis thaliana]
gi|330252528|gb|AEC07622.1| glutamate receptor 2.2 [Arabidopsis thaliana]
Length = 920
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 4 NTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAA 63
N VN+G+V D+ +A+ CINMSL+DFY+S ++TRL++N DSK DVV AA
Sbjct: 27 NGKTQVNIGVVSDVGTSYPDVAMLCINMSLADFYSSRPQFQTRLVVNVGDSKNDVVGAAT 86
Query: 64 AEI 66
A I
Sbjct: 87 AAI 89
>gi|449493390|ref|XP_004159275.1| PREDICTED: glutamate receptor 2.5-like [Cucumis sativus]
Length = 917
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 15 LDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
LD+N GK+ LSCI+M+L+DFY+S S YKTR++LNT DS VV AAAA +
Sbjct: 51 LDLNFSFGKMGLSCISMALADFYSSRSRYKTRVILNTIDSNNTVVGAAAAAL 102
>gi|449442136|ref|XP_004138838.1| PREDICTED: glutamate receptor 2.5-like [Cucumis sativus]
Length = 872
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 15 LDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
LD+N GK+ LSCI+M+L+DFY+S S YKTR++LNT DS VV AAAA +
Sbjct: 51 LDLNFSFGKMGLSCISMALADFYSSRSRYKTRVILNTIDSNNTVVGAAAAAL 102
>gi|449493386|ref|XP_004159274.1| PREDICTED: glutamate receptor 2.5-like [Cucumis sativus]
Length = 904
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 41/52 (78%)
Query: 15 LDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
LD+N GKI+LSCI+M+L+DFY S S+YKTR++LN DS G V+ AAAA +
Sbjct: 53 LDLNVIVGKISLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAAAL 104
>gi|224101509|ref|XP_002334271.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222870492|gb|EEF07623.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 249
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+ G+VLD+N GK+A SCI+ + +DFY N+ Y+TR+ L TR+SKGDVV AA+A +
Sbjct: 30 IRAGVVLDMNSAVGKMAESCISAAETDFYARNADYRTRISLATRNSKGDVVTAASAAL 87
>gi|147767994|emb|CAN64920.1| hypothetical protein VITISV_017199 [Vitis vinifera]
Length = 887
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 11 VGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
VG+VLD+ G++A +CI+M++SDFY+ N HYKTRL+L+TRDS GD + A + I
Sbjct: 37 VGVVLDMGSSLGRMANNCISMAVSDFYSINRHYKTRLILHTRDSMGDPLYALSLAI 92
>gi|449470122|ref|XP_004152767.1| PREDICTED: glutamate receptor 2.9-like [Cucumis sativus]
Length = 865
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGD-VVAA 61
K T++ VNVG++L + GK+ LSCIN+SL+DFY+SN HY T++LL+ DS D ++AA
Sbjct: 16 KQTSV-VNVGVILSSSSWVGKMGLSCINLSLTDFYSSNPHYNTKILLHINDSNDDPLLAA 74
Query: 62 AAAEILIDQ 70
+ A LI++
Sbjct: 75 SQALELIEK 83
>gi|158578539|gb|ABW74564.1| glutamate receptor 3 [Boechera divaricarpa]
Length = 954
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAA 62
+N T + VG+VLD+N KI L+ INM+LSDFY + +Y+TRL ++ RDS D V A+
Sbjct: 30 QNQTREIKVGVVLDLNTTFSKICLTSINMALSDFYKDHPNYRTRLAVHVRDSMKDTVQAS 89
Query: 63 AAEI 66
AA +
Sbjct: 90 AAAL 93
>gi|449520701|ref|XP_004167372.1| PREDICTED: glutamate receptor 2.9-like [Cucumis sativus]
Length = 768
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGD-VVAA 61
K T++ VNVG++L + GK+ LSCIN+SL+DFY+SN HY T++LL+ DS D ++AA
Sbjct: 16 KQTSV-VNVGVILSSSSWVGKMGLSCINLSLTDFYSSNPHYNTKILLHINDSNDDPLLAA 74
Query: 62 AAAEILIDQ 70
+ A LI++
Sbjct: 75 SQALELIEK 83
>gi|224142291|ref|XP_002324492.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222865926|gb|EEF03057.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 107
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 2/64 (3%)
Query: 6 TIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAE 65
+IP+ G+VLD+N G++A SC++M++SDFY N +KTRL L TRDS DVVAA ++
Sbjct: 32 SIPI--GVVLDLNSTVGEMAESCMSMAVSDFYALNVDFKTRLALFTRDSSSDVVAATSSG 89
Query: 66 ILID 69
I ++
Sbjct: 90 IRVN 93
>gi|297811233|ref|XP_002873500.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319337|gb|EFH49759.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 959
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 47/67 (70%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
S+ + V VG+VLD N ++L INMSLS+FY++++ +KTR++LN RDSK V+ A
Sbjct: 29 SQKEVLQVKVGIVLDTNVTLADLSLRAINMSLSEFYSTHNGFKTRIVLNIRDSKRTVIGA 88
Query: 62 AAAEILI 68
AA+ + +
Sbjct: 89 AASALYL 95
>gi|449442134|ref|XP_004138837.1| PREDICTED: glutamate receptor 2.5-like [Cucumis sativus]
Length = 907
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 15 LDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
LD+N GKI+LSCI+M+L+DFY S+YKTR++LN DS G V+ AAAA +
Sbjct: 56 LDLNVIVGKISLSCISMALADFYAPRSYYKTRIILNPIDSNGSVIRAAAAAL 107
>gi|145358470|ref|NP_198062.2| glutamate receptor 2.1 [Arabidopsis thaliana]
gi|41017064|sp|O04660.2|GLR21_ARATH RecName: Full=Glutamate receptor 2.1; AltName: Full=Ligand-gated
ion channel 2.1; Short=AtGLR3; Flags: Precursor
gi|110735998|dbj|BAE99973.1| ion channel - like protein [Arabidopsis thaliana]
gi|332006267|gb|AED93650.1| glutamate receptor 2.1 [Arabidopsis thaliana]
Length = 901
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 42/65 (64%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++N VNVG+V DI + L CINMSLSDFY+S+ +TRL+ DSK DVV A
Sbjct: 25 AQNRITNVNVGIVNDIGTAYSNMTLLCINMSLSDFYSSHPETQTRLVTTVVDSKNDVVTA 84
Query: 62 AAAEI 66
AAA +
Sbjct: 85 AAAAL 89
>gi|297825469|ref|XP_002880617.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297326456|gb|EFH56876.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 882
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
+N VNVG+V D+ I + CINMSL+DFY+S H++TR+++N DSK DVV
Sbjct: 23 QNKKTEVNVGIVTDVGMMHSDIEMLCINMSLADFYSSRPHFRTRIVVNVGDSKKDVVG 80
>gi|2191183|gb|AAB61068.1| similar to the ligand-gated ionic channels family [Arabidopsis
thaliana]
Length = 938
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 41/63 (65%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++N VNVG+V DI + L CINMSLSDFY+S+ +TRL+ DSK DVV A
Sbjct: 25 AQNRITNVNVGIVNDIGTAYSNMTLLCINMSLSDFYSSHPETQTRLVTTVVDSKNDVVTA 84
Query: 62 AAA 64
AAA
Sbjct: 85 AAA 87
>gi|297735388|emb|CBI17828.3| unnamed protein product [Vitis vinifera]
Length = 884
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 44/56 (78%)
Query: 11 VGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+G+VLD+ G++A +CI+M++SDFY+ N HY+TRL+L+TRDS G+ + A ++ I
Sbjct: 37 IGVVLDMGSSLGRMANNCISMAVSDFYSINRHYQTRLVLHTRDSMGEPLYALSSAI 92
>gi|3482940|gb|AAC33237.1| putative ligand-gated ion channel protein [Arabidopsis thaliana]
Length = 958
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAA 62
+N + VG+VLD+N KI L+ IN++LSDFY + +Y+TRL L+ RDS D V A+
Sbjct: 27 QNQISEIKVGVVLDLNTTFSKICLTSINLALSDFYKDHPNYRTRLALHVRDSMKDTVQAS 86
Query: 63 AAEIL 67
AA L
Sbjct: 87 AAAAL 91
>gi|41017231|sp|Q9LFN5.2|GLR25_ARATH RecName: Full=Glutamate receptor 2.5; AltName: Full=Ligand-gated
ion channel 2.5; Flags: Precursor
Length = 918
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
S+ + V VG+VL N ++L INMSLS+FYN+++ +KTR++LN RDSK VV A
Sbjct: 30 SQKEALQVKVGIVLGSNVTLADLSLRAINMSLSEFYNTHNGFKTRIVLNVRDSKQTVVGA 89
Query: 62 AAAEILI 68
AA+ + +
Sbjct: 90 AASALYL 96
>gi|30684127|ref|NP_180475.2| glutamate receptor 2.8 [Arabidopsis thaliana]
gi|41017226|sp|Q9C5V5.2|GLR28_ARATH RecName: Full=Glutamate receptor 2.8; AltName: Full=Ligand-gated
ion channel 2.8; Flags: Precursor
gi|330253118|gb|AEC08212.1| glutamate receptor 2.8 [Arabidopsis thaliana]
Length = 947
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAA 62
+N + VG+VLD+N KI L+ IN++LSDFY + +Y+TRL L+ RDS D V A+
Sbjct: 27 QNQISEIKVGVVLDLNTTFSKICLTSINLALSDFYKDHPNYRTRLALHVRDSMKDTVQAS 86
Query: 63 AAEILIDQ 70
AA + + Q
Sbjct: 87 AAALDLIQ 94
>gi|12964235|emb|CAC29254.1| ligand gated channel-like protein precursor [Arabidopsis
thaliana]
Length = 947
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAA 62
+N + VG+VLD+N KI L+ IN++LSDFY + +Y+TRL L+ RDS D V A+
Sbjct: 27 QNQISEIKVGVVLDLNTTFSKICLTSINLALSDFYKDHPNYRTRLALHVRDSMKDTVQAS 86
Query: 63 AAEILIDQ 70
AA + + Q
Sbjct: 87 AAALDLIQ 94
>gi|158578538|gb|ABW74563.1| glutamate receptor 2 [Boechera divaricarpa]
Length = 959
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAA 62
+N + +G+VLD+ KI L+ INMSLSDFY ++ Y TRL ++ RDS DVV A+
Sbjct: 20 QNQKTEIKLGVVLDLQTSFSKICLTSINMSLSDFYEKHADYTTRLTIHVRDSMEDVVQAS 79
Query: 63 AAEI 66
AA +
Sbjct: 80 AAAL 83
>gi|158828192|gb|ABW81070.1| unknown [Cleome spinosa]
Length = 782
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAA 62
+++ V VG+VLD+ KI L+ IN+SLSDFY ++++Y TRL L RDS D VAA+
Sbjct: 33 QDSKTQVKVGVVLDLQTAFSKICLASINISLSDFYANHANYSTRLALQFRDSDKDAVAAS 92
Query: 63 AA 64
AA
Sbjct: 93 AA 94
>gi|79565702|ref|NP_180476.3| glutamate receptor 2.7 [Arabidopsis thaliana]
gi|148877234|sp|Q8LGN0.3|GLR27_ARATH RecName: Full=Glutamate receptor 2.7; AltName: Full=Ligand-gated
ion channel 2.7; Flags: Precursor
gi|40557616|gb|AAR88101.1| putative glutamate receptor ion channel [Arabidopsis thaliana]
gi|330253119|gb|AEC08213.1| glutamate receptor 2.7 [Arabidopsis thaliana]
Length = 952
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAA 62
+N T + VG+VLD++ K+ L+ IN+SLSDFY +S Y TRL ++ RDS DVV A+
Sbjct: 33 QNQTTEIKVGVVLDLHTSFSKLCLTSINISLSDFYKYHSDYTTRLAIHIRDSMEDVVQAS 92
Query: 63 AAEI 66
+A +
Sbjct: 93 SAAL 96
>gi|21684650|gb|AAL61998.1| putative glutamate receptor protein [Arabidopsis thaliana]
Length = 926
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAA 62
+N T + VG+VLD++ K+ L+ IN+SLSDFY +S Y TRL ++ RDS DVV A+
Sbjct: 7 QNQTTEIKVGVVLDLHTSFSKLCLTSINISLSDFYKYHSDYTTRLAIHIRDSMEDVVQAS 66
Query: 63 AAEI 66
+A +
Sbjct: 67 SAAL 70
>gi|3482941|gb|AAC33239.1| putative ligand-gated ion channel protein [Arabidopsis thaliana]
Length = 934
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAA 62
+N T + VG+VLD++ K+ L+ IN+SLSDFY +S Y TRL ++ RDS DVV A+
Sbjct: 7 QNQTTEIKVGVVLDLHTSFSKLCLTSINISLSDFYKYHSDYTTRLAIHIRDSMEDVVQAS 66
Query: 63 AAEI 66
+A +
Sbjct: 67 SAAL 70
>gi|449493398|ref|XP_004159277.1| PREDICTED: glutamate receptor 2.7-like [Cucumis sativus]
Length = 858
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 22 GKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
GK+ LSCI+M+LSDFY S SH+KTR++L DS G VV AAAA +
Sbjct: 54 GKVDLSCISMALSDFYASRSHFKTRVVLKPMDSNGTVVDAAAAAL 98
>gi|297811231|ref|XP_002873499.1| glutamate receptor 2.5 precursor [Arabidopsis lyrata subsp.
lyrata]
gi|297319336|gb|EFH49758.1| glutamate receptor 2.5 precursor [Arabidopsis lyrata subsp.
lyrata]
Length = 917
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
S+ + V VG+VL N ++L I MSLS+FYN+++ +KTR++LN RDSK VV A
Sbjct: 28 SQKEALQVKVGIVLGSNVTFADLSLRAIEMSLSEFYNTHNGFKTRIVLNIRDSKQTVVGA 87
Query: 62 AAAEILI 68
AA+ + +
Sbjct: 88 AASALYL 94
>gi|15227034|ref|NP_180474.1| glutamate receptor 2.9 [Arabidopsis thaliana]
gi|41017071|sp|O81078.1|GLR29_ARATH RecName: Full=Glutamate receptor 2.9; AltName: Full=Ligand-gated
ion channel 2.9; Flags: Precursor
gi|3461850|gb|AAC33236.1| putative ligand-gated ion channel protein [Arabidopsis thaliana]
gi|330253117|gb|AEC08211.1| glutamate receptor 2.9 [Arabidopsis thaliana]
Length = 940
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAA 62
+N T + VG+VLD+N KI L+ I M++SDFY + +Y TRL L+ RDS D V A+
Sbjct: 24 QNQTSEIKVGVVLDLNTTFSKICLTSIKMAVSDFYADHPNYLTRLTLHVRDSMEDTVQAS 83
Query: 63 AAEI 66
AA +
Sbjct: 84 AAAL 87
>gi|15236044|ref|NP_194899.1| glutamate receptor 2.4 [Arabidopsis thaliana]
gi|3281857|emb|CAA19752.1| putative protein [Arabidopsis thaliana]
gi|7270074|emb|CAB79889.1| putative protein [Arabidopsis thaliana]
gi|332660548|gb|AEE85948.1| glutamate receptor 2.4 [Arabidopsis thaliana]
Length = 898
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 3 KNTTIPV-NVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
+NTTI V NVG+V D+ ++L INMSLSDFY+S +TRLLLN DS+ DVV
Sbjct: 48 QNTTIQVINVGVVTDVGTTASNLSLLAINMSLSDFYSSRPESRTRLLLNFADSRDDVVG 106
>gi|41017072|sp|O81776.2|GLR24_ARATH RecName: Full=Glutamate receptor 2.4; AltName: Full=Ligand-gated
ion channel 2.4; Flags: Precursor
Length = 896
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 3 KNTTIPV-NVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
+NTTI V NVG+V D+ ++L INMSLSDFY+S +TRLLLN DS+ DVV
Sbjct: 25 QNTTIQVINVGVVTDVGTTASNLSLLAINMSLSDFYSSRPESRTRLLLNFADSRDDVVG 83
>gi|449458239|ref|XP_004146855.1| PREDICTED: glutamate receptor 2.7-like [Cucumis sativus]
Length = 1014
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 43/65 (66%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
+ + + V VGLVLD + GK+ +S + M+LSDFY S+ +YKTRL L ++S DV+ A
Sbjct: 109 ADDEAVTVKVGLVLDSDSSIGKMGVSYMEMALSDFYESHRNYKTRLALFAKNSMEDVIEA 168
Query: 62 AAAEI 66
AA I
Sbjct: 169 TAAAI 173
>gi|449476911|ref|XP_004154873.1| PREDICTED: glutamate receptor 2.7-like [Cucumis sativus]
Length = 939
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 43/65 (66%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
+ + + V VGLVLD + GK+ +S + M+LSDFY S+ +YKTRL L ++S DV+ A
Sbjct: 27 ADDEAVTVKVGLVLDSDSSIGKMGVSYMEMALSDFYESHRNYKTRLALFAKNSMEDVIEA 86
Query: 62 AAAEI 66
AA I
Sbjct: 87 TAAAI 91
>gi|297833542|ref|XP_002884653.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330493|gb|EFH60912.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 797
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 41/58 (70%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
V +GLV+D+ +GK S I+M+LSDFYN N+ Y+TR+ + +RDS GD + A AA +
Sbjct: 42 VRIGLVVDMGSMEGKFVKSSISMALSDFYNVNNGYRTRVSVLSRDSHGDPLQALAAAM 99
>gi|297790305|ref|XP_002863052.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308857|gb|EFH39311.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 947
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAA 62
++ T + VG+VLD+ KI L+ IN+SLSDFY ++ Y TRL ++ RDS DVV A+
Sbjct: 33 QSQTSEIKVGVVLDLQTSFSKICLTSINISLSDFYKYHADYTTRLAIHIRDSMEDVVQAS 92
Query: 63 AAEI 66
+A +
Sbjct: 93 SAAL 96
>gi|15224606|ref|NP_180047.1| glutamate receptor 2.3 [Arabidopsis thaliana]
gi|41017240|sp|Q9SHV2.1|GLR23_ARATH RecName: Full=Glutamate receptor 2.3; AltName: Full=Ligand-gated
ion channel 2.3; Flags: Precursor
gi|4646231|gb|AAD26894.1| putative ligand-gated ion channel protein [Arabidopsis thaliana]
gi|330252527|gb|AEC07621.1| glutamate receptor 2.3 [Arabidopsis thaliana]
Length = 895
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 23 KIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
K+ + CINMS+SDFY+SN ++TRL++N DSK DVV AA A +
Sbjct: 45 KVVMLCINMSISDFYSSNPQFETRLVVNVGDSKSDVVGAAIAAL 88
>gi|297818372|ref|XP_002877069.1| ATGLR1.2 [Arabidopsis lyrata subsp. lyrata]
gi|297322907|gb|EFH53328.1| ATGLR1.2 [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 7 IPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
I V VGL+LD+ +GKI S ++M+LSDFY NSHYKTR+ + ++S G+ + A + I
Sbjct: 41 IRVRVGLILDLGSVEGKIVRSSVSMALSDFYVINSHYKTRVSFSVKNSHGEPLLALGSAI 100
>gi|356519812|ref|XP_003528563.1| PREDICTED: glutamate receptor 2.8-like [Glycine max]
Length = 818
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++ TIP+ G+VLD+N G +A SCI M+ DFY + ++TRL L TR+S GD V A
Sbjct: 28 AREVTIPI--GVVLDLNSPIGSMANSCIWMAHHDFYKQHPRFQTRLDLRTRNSGGDTVKA 85
Query: 62 AAA 64
A A
Sbjct: 86 AYA 88
>gi|222635102|gb|EEE65234.1| hypothetical protein OsJ_20397 [Oryza sativa Japonica Group]
Length = 892
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 6/65 (9%)
Query: 8 PVNVGLVLDI-NGEDGKIALSCINMSLSDFYNSNSHY-----KTRLLLNTRDSKGDVVAA 61
PV VG+VLD+ +G +G+ +L+CI+M+L D+Y +N + + R+ L RDS+GDV+AA
Sbjct: 36 PVRVGVVLDLASGGEGRRSLACISMALDDYYGANDYSTAAAARARVELRVRDSRGDVLAA 95
Query: 62 AAAEI 66
A A +
Sbjct: 96 AHAGV 100
>gi|297828896|ref|XP_002882330.1| hypothetical protein ARALYDRAFT_477672 [Arabidopsis lyrata subsp.
lyrata]
gi|297328170|gb|EFH58589.1| hypothetical protein ARALYDRAFT_477672 [Arabidopsis lyrata subsp.
lyrata]
Length = 794
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGD-VVAAAAAEIL 67
V VGLV+D++ GKI ++ +N++LSDFY N+ Y+TR+ + RDS+GD ++A AAA L
Sbjct: 29 VRVGLVVDLSSTQGKILVTSLNLALSDFYGINNGYRTRVSILVRDSQGDPIIALAAATDL 88
Query: 68 I 68
+
Sbjct: 89 L 89
>gi|15238964|ref|NP_199651.1| glutamate receptor 1.2 [Arabidopsis thaliana]
gi|41017233|sp|Q9LV72.1|GLR12_ARATH RecName: Full=Glutamate receptor 1.2; AltName: Full=Ligand-gated
ion channel 1.2; Flags: Precursor
gi|8777370|dbj|BAA96960.1| ligand-gated ion channel protein-like; glutamate receptor-like
[Arabidopsis thaliana]
gi|21684640|gb|AAL61993.1| putative glutamate receptor protein GLR1.2a [Arabidopsis
thaliana]
gi|332008283|gb|AED95666.1| glutamate receptor 1.2 [Arabidopsis thaliana]
Length = 867
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 40/55 (72%)
Query: 7 IPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
I V VGLVLD+ +GKI S ++M+LSDFY++++ YKTRL L RDS G+ + A
Sbjct: 38 IRVRVGLVLDLGSVEGKIVRSSVSMALSDFYDNHNDYKTRLSLLVRDSHGEPLLA 92
>gi|297825463|ref|XP_002880614.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297326453|gb|EFH56873.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 250
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
VNVG+V D+ +A+ CINMSL+DFY+S ++TRL++N DS+ DV+
Sbjct: 30 VNVGVVTDVGTSYSDVAMLCINMSLADFYSSRPQFQTRLVVNIGDSRNDVLG 81
>gi|30695454|ref|NP_851155.1| glutamate receptor 1.2 [Arabidopsis thaliana]
gi|21684642|gb|AAL61994.1| putative glutamate receptor protein GLR1.2b [Arabidopsis
thaliana]
gi|332008282|gb|AED95665.1| glutamate receptor 1.2 [Arabidopsis thaliana]
Length = 750
Score = 57.4 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 40/55 (72%)
Query: 7 IPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
I V VGLVLD+ +GKI S ++M+LSDFY++++ YKTRL L RDS G+ + A
Sbjct: 38 IRVRVGLVLDLGSVEGKIVRSSVSMALSDFYDNHNDYKTRLSLLVRDSHGEPLLA 92
>gi|158828292|gb|ABW81168.1| GTR2 [Capsella rubella]
Length = 924
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGD 57
+N + VG+VLD+ KI L+ I MSLSDFY NS+Y TRL+L+ RDS D
Sbjct: 7 QNQEREIKVGVVLDLQTNFSKICLTAIKMSLSDFYKDNSNYSTRLVLHVRDSMED 61
>gi|6041847|gb|AAF02156.1|AC009853_16 unknown protein [Arabidopsis thaliana]
Length = 858
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 42/58 (72%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
V +GLV+D+ +GK+ + I+M+LSDFY+ N+ Y+TR+ + +RDS GD + A AA +
Sbjct: 46 VRIGLVVDMGSMEGKLVTTSISMALSDFYHVNNGYRTRVSVLSRDSHGDPLQALAAAM 103
>gi|30680330|ref|NP_187408.2| glutamate receptor 1.4 [Arabidopsis thaliana]
gi|41017206|sp|Q8LGN1.2|GLR14_ARATH RecName: Full=Glutamate receptor 1.4; AltName: Full=Ligand-gated
ion channel 1.4; Flags: Precursor
gi|21684644|gb|AAL61995.1| putative glutamate receptor protein GLR1.4a [Arabidopsis thaliana]
gi|332641032|gb|AEE74553.1| glutamate receptor 1.4 [Arabidopsis thaliana]
Length = 861
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 42/58 (72%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
V +GLV+D+ +GK+ + I+M+LSDFY+ N+ Y+TR+ + +RDS GD + A AA +
Sbjct: 46 VRIGLVVDMGSMEGKLVTTSISMALSDFYHVNNGYRTRVSVLSRDSHGDPLQALAAAM 103
>gi|158828193|gb|ABW81071.1| unknown [Cleome spinosa]
Length = 986
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 40/57 (70%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVV 59
+++ V VG+VLD+ KI L+ IN+SLSDFY ++++Y TRL L+ RDS DVV
Sbjct: 33 QDSKTEVKVGVVLDLQTTFSKICLTSINISLSDFYANHANYSTRLALHLRDSDRDVV 89
>gi|222424226|dbj|BAH20071.1| AT3G07520 [Arabidopsis thaliana]
Length = 837
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 42/58 (72%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
V +GLV+D+ +GK+ + I+M+LSDFY+ N+ Y+TR+ + +RDS GD + A AA +
Sbjct: 22 VRIGLVVDMGSMEGKLVTTSISMALSDFYHVNNGYRTRVSVLSRDSHGDPLQALAAAM 79
>gi|224142031|ref|XP_002324363.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222865797|gb|EEF02928.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 867
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 22 GKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDV 58
GK LSCINMSLSDFY+++ YKTRL+L TRDS+ DV
Sbjct: 15 GKTGLSCINMSLSDFYDTHGDYKTRLVLVTRDSENDV 51
>gi|242049344|ref|XP_002462416.1| hypothetical protein SORBIDRAFT_02g025270 [Sorghum bicolor]
gi|241925793|gb|EER98937.1| hypothetical protein SORBIDRAFT_02g025270 [Sorghum bicolor]
Length = 888
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 44/62 (70%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
S T V+VG++LD+ GKIA++ I+++L DFY ++ +Y T+L+L+ RDSK D V A
Sbjct: 24 SGGRTQEVHVGVILDLGSLVGKIAITSISLALEDFYAAHQNYSTKLVLHIRDSKSDDVQA 83
Query: 62 AA 63
A+
Sbjct: 84 AS 85
>gi|297792021|ref|XP_002863895.1| ATGLR1.2 [Arabidopsis lyrata subsp. lyrata]
gi|297309730|gb|EFH40154.1| ATGLR1.2 [Arabidopsis lyrata subsp. lyrata]
Length = 860
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 7 IPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
I V VGLVLD+ +GKI S ++M+LSDFY N+ YKTR+ L RDS G+ + A+ +
Sbjct: 34 IQVRVGLVLDLGSLEGKIVRSSVSMALSDFYAINNDYKTRVSLLVRDSHGEPLLGLASVV 93
>gi|218197733|gb|EEC80160.1| hypothetical protein OsI_21975 [Oryza sativa Indica Group]
Length = 925
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 7 IPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+ V+VG++LD+ GK ++ + M+L D Y ++ + TR+ L RDS+GDVVAAA+A I
Sbjct: 56 VAVDVGVILDLATALGKKSMLSMEMALEDVYAAHPEFATRVALRARDSRGDVVAAASAAI 115
>gi|297792023|ref|XP_002863896.1| ATGLR1.3 [Arabidopsis lyrata subsp. lyrata]
gi|297309731|gb|EFH40155.1| ATGLR1.3 [Arabidopsis lyrata subsp. lyrata]
Length = 861
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 7 IPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+ + VGLVLD+ +GKI S ++M+LSDFY N+ YKTR+ + R+S G+ + A A+ +
Sbjct: 39 VQIRVGLVLDLGSVEGKIVKSSVSMALSDFYAINNDYKTRVSFSVRNSHGEPLLALASAV 98
>gi|297838133|ref|XP_002886948.1| hypothetical protein ARALYDRAFT_315594 [Arabidopsis lyrata subsp.
lyrata]
gi|297332789|gb|EFH63207.1| hypothetical protein ARALYDRAFT_315594 [Arabidopsis lyrata subsp.
lyrata]
Length = 825
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 2 SKNTTIP-VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
SKN V VGLV+D+ GKI + I+++LSDFY N+ Y+TR+ + RDS+GD +
Sbjct: 21 SKNIVFEEVRVGLVVDLGSIQGKILKTSISLALSDFYRVNNSYRTRVSVLDRDSQGDPLL 80
Query: 61 AAAA 64
A AA
Sbjct: 81 ALAA 84
>gi|125605772|gb|EAZ44808.1| hypothetical protein OsJ_29443 [Oryza sativa Japonica Group]
Length = 572
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 42/57 (73%)
Query: 10 NVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+VG++LD+ GK A + I+M++ DFY S+ +Y+TRL+L+ RDS+G+ AA+A +
Sbjct: 35 HVGVILDLGSLVGKEARTSISMAVEDFYASHKNYRTRLVLHVRDSRGNNFQAASAAL 91
>gi|296083768|emb|CBI23985.3| unnamed protein product [Vitis vinifera]
Length = 838
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/37 (67%), Positives = 29/37 (78%)
Query: 24 IALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
+ LSCI+M+LSDFY S+ HYKTRL L RDSK DVV
Sbjct: 1 MGLSCISMALSDFYASHGHYKTRLALEIRDSKRDVVG 37
>gi|4185738|gb|AAD09173.1| putative glutamate receptor [Arabidopsis thaliana]
Length = 808
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGD-VVAAAAAEIL 67
V VGLV+D++ GKI + N++LSDFY N+ Y+TR+ + RDS+GD ++A AAA L
Sbjct: 30 VRVGLVVDLSSIQGKILETSFNLALSDFYGINNGYRTRVSVLVRDSQGDPIIALAAATDL 89
Query: 68 I 68
+
Sbjct: 90 L 90
>gi|15229229|ref|NP_187061.1| glutamate receptor 1.1 [Arabidopsis thaliana]
gi|41017234|sp|Q9M8W7.1|GLR11_ARATH RecName: Full=Glutamate receptor 1.1; Short=AtGLR1; AltName:
Full=Ligand-gated ion channel 1.1; Flags: Precursor
gi|6721174|gb|AAF26802.1|AC016829_26 putative glutamate receptor (GLR1) [Arabidopsis thaliana]
gi|26450250|dbj|BAC42242.1| putative glutamate receptor GLR1 [Arabidopsis thaliana]
gi|332640517|gb|AEE74038.1| glutamate receptor 1.1 [Arabidopsis thaliana]
Length = 808
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGD-VVAAAAAEIL 67
V VGLV+D++ GKI + N++LSDFY N+ Y+TR+ + RDS+GD ++A AAA L
Sbjct: 30 VRVGLVVDLSSIQGKILETSFNLALSDFYGINNGYRTRVSVLVRDSQGDPIIALAAATDL 89
Query: 68 I 68
+
Sbjct: 90 L 90
>gi|50726494|dbj|BAD34102.1| putative Avr9/Cf-9 rapidly elicited protein 141 [Oryza sativa
Japonica Group]
Length = 919
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 42/57 (73%)
Query: 10 NVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+VG++LD+ GK A + I+M++ DFY S+ +Y+TRL+L+ RDS+G+ AA+A +
Sbjct: 35 HVGVILDLGSLVGKEARTSISMAVEDFYASHKNYRTRLVLHVRDSRGNNFQAASAAL 91
>gi|242049342|ref|XP_002462415.1| hypothetical protein SORBIDRAFT_02g025250 [Sorghum bicolor]
gi|241925792|gb|EER98936.1| hypothetical protein SORBIDRAFT_02g025250 [Sorghum bicolor]
Length = 873
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++N +VG+VLD+ GK+A + I++++ DFY + +Y TRL+L+ RDS D V A
Sbjct: 24 TENKVEKFHVGVVLDLGTPVGKVARTSISIAVEDFYAVHPNYTTRLVLHVRDSMTDDVQA 83
Query: 62 AAAEI 66
AAA I
Sbjct: 84 AAAVI 88
>gi|218202190|gb|EEC84617.1| hypothetical protein OsI_31458 [Oryza sativa Indica Group]
Length = 934
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 44/65 (67%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
+KN ++VG++L + GKIA + + M++ DFY+ + ++KT+L+L+ RDS GD V A
Sbjct: 24 TKNGAGTLDVGVILHLKSLVGKIARTSVLMAVEDFYSVHRNFKTKLVLHIRDSNGDDVQA 83
Query: 62 AAAEI 66
A+ I
Sbjct: 84 ASEAI 88
>gi|125563803|gb|EAZ09183.1| hypothetical protein OsI_31454 [Oryza sativa Indica Group]
Length = 933
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 41/58 (70%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+NVG++L + GK+A + I M++ DFY ++ ++KT+L+L+ RDS GD + AA+ I
Sbjct: 33 LNVGVILHLKSLVGKMARTSILMAVEDFYKAHRNFKTKLVLHIRDSNGDDIQAASEAI 90
>gi|50726498|dbj|BAD34106.1| putative Avr9/Cf-9 rapidly elicited protein 141 [Oryza sativa
Japonica Group]
gi|125605774|gb|EAZ44810.1| hypothetical protein OsJ_29446 [Oryza sativa Japonica Group]
Length = 933
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 41/58 (70%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+NVG++L + GK+A + I M++ DFY ++ ++KT+L+L+ RDS GD + AA+ I
Sbjct: 33 LNVGVILHLKSLVGKMARTSILMAVEDFYKAHRNFKTKLVLHIRDSNGDDIQAASEAI 90
>gi|158828293|gb|ABW81169.1| GRT1 [Capsella rubella]
Length = 173
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 3 KNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGD 57
+N + +G+VLD+ KI L+ +NMSLSDFY+ ++ Y TRL ++ RDS D
Sbjct: 7 QNQATEIKLGVVLDLQTPFSKICLTSMNMSLSDFYSKHADYTTRLKIHVRDSMED 61
>gi|125563807|gb|EAZ09187.1| hypothetical protein OsI_31459 [Oryza sativa Indica Group]
Length = 946
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 1 TSKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
T+++ T +NVG++L + GK+A + I M++ DFY + +KT+L+L+ RDS GD +
Sbjct: 23 TTESGTGTLNVGVILHLKSLVGKMAHTSIMMAVEDFYAVHRSFKTKLVLHIRDSNGDDIQ 82
Query: 61 AAAAEI 66
AA+ I
Sbjct: 83 AASEAI 88
>gi|50726504|dbj|BAD34112.1| putative Avr9/Cf-9 rapidly elicited protein 141 [Oryza sativa
Japonica Group]
Length = 924
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 1 TSKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
T+++ T +NVG++L + GK+A + I M++ DFY + +KT+L+L+ RDS GD +
Sbjct: 23 TTESGTGTLNVGVILHLKSLVGKMAHTSIMMAVEDFYAVHRSFKTKLVLHIRDSNGDDIQ 82
Query: 61 AAAAEI 66
AA+ I
Sbjct: 83 AASEAI 88
>gi|222641622|gb|EEE69754.1| hypothetical protein OsJ_29451 [Oryza sativa Japonica Group]
Length = 946
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 1 TSKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
T+++ T +NVG++L + GK+A + I M++ DFY + +KT+L+L+ RDS GD +
Sbjct: 23 TTESGTGTLNVGVILHLKSLVGKMAHTSIMMAVEDFYAVHRSFKTKLVLHIRDSNGDDIQ 82
Query: 61 AAAAEI 66
AA+ I
Sbjct: 83 AASEAI 88
>gi|297609517|ref|NP_001063234.2| Os09g0429400 [Oryza sativa Japonica Group]
gi|50726502|dbj|BAD34110.1| putative Avr9/Cf-9 rapidly elicited protein 141 [Oryza sativa
Japonica Group]
gi|222641621|gb|EEE69753.1| hypothetical protein OsJ_29450 [Oryza sativa Japonica Group]
gi|255678918|dbj|BAF25148.2| Os09g0429400 [Oryza sativa Japonica Group]
Length = 934
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 44/65 (67%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
+KN ++VG++L + GKIA + + M++ DFY+ + ++KT+L+L+ RDS GD V A
Sbjct: 24 TKNGAGTLDVGVILHLKSLVGKIARTSVLMAVEDFYSVHRNFKTKLVLHIRDSNGDDVQA 83
Query: 62 AAAEI 66
A+ I
Sbjct: 84 ASEAI 88
>gi|297792019|ref|XP_002863894.1| ATGLR1.2 [Arabidopsis lyrata subsp. lyrata]
gi|297309729|gb|EFH40153.1| ATGLR1.2 [Arabidopsis lyrata subsp. lyrata]
Length = 841
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 7 IPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGD 57
+ V VGLVLD+ +GKI S ++M+LSDFY ++ YKTR+ L+ R+S G+
Sbjct: 39 VRVRVGLVLDLGSVEGKIVRSSVSMALSDFYAIHNDYKTRVSLSVRNSHGE 89
>gi|115479285|ref|NP_001063236.1| Os09g0431100 [Oryza sativa Japonica Group]
gi|50726227|dbj|BAD33804.1| putative Avr9/Cf-9 rapidly elicited protein 141 [Oryza sativa
Japonica Group]
gi|113631469|dbj|BAF25150.1| Os09g0431100 [Oryza sativa Japonica Group]
Length = 955
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 7 IPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+ V VGL++D GKIA + I M+L DFY + R+ L RDS+GDVVAAA+A +
Sbjct: 27 LTVTVGLIIDGGSPVGKIANTTIPMALDDFYAAFPRSPARVRLLHRDSRGDVVAAASAAL 86
>gi|222641625|gb|EEE69757.1| hypothetical protein OsJ_29457 [Oryza sativa Japonica Group]
Length = 497
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 7 IPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+ V VGL++D GKIA + I M+L DFY + R+ L RDS+GDVVAAA+A +
Sbjct: 27 LTVTVGLIIDGGSPVGKIANTTIPMALDDFYAAFPRSPARVRLLHRDSRGDVVAAASAAL 86
>gi|218202191|gb|EEC84618.1| hypothetical protein OsI_31464 [Oryza sativa Indica Group]
Length = 957
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 7 IPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+ V VGL++D GKIA + I M+L DFY + R+ L RDS+GDVVAAA+A +
Sbjct: 28 LTVTVGLIIDGGSPVGKIANTTIPMALDDFYAAFPRSPARVRLLHRDSRGDVVAAASAAL 87
>gi|242064714|ref|XP_002453646.1| hypothetical protein SORBIDRAFT_04g009830 [Sorghum bicolor]
gi|241933477|gb|EES06622.1| hypothetical protein SORBIDRAFT_04g009830 [Sorghum bicolor]
Length = 882
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 40/55 (72%)
Query: 10 NVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAA 64
++G+VLD+ GK+A + I++++ DFY + ++ TRL+L+ RDSK D V AA+A
Sbjct: 32 HIGVVLDLGTTVGKVAHTSISIAVEDFYTVHPNHTTRLVLHVRDSKSDDVQAASA 86
>gi|296083759|emb|CBI23976.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 31 MSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAA 64
M+LSDFY S+ HYKTRL+L RDS DVV AAAA
Sbjct: 1 MALSDFYASHGHYKTRLVLEIRDSNRDVVGAAAA 34
>gi|357153751|ref|XP_003576554.1| PREDICTED: glutamate receptor 2.7-like [Brachypodium distachyon]
Length = 970
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 7 IPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSH--YKTRLLLNTRDSKGDVVAAAAA 64
+ VNVG++LD G + +C+ M++ DFY H Y+TRL L+ RD+ D V AA+A
Sbjct: 47 VEVNVGVILDTKTWSGNTSWACMEMAMEDFYADARHAGYRTRLKLHLRDAGSDPVDAASA 106
Query: 65 EI 66
+
Sbjct: 107 GV 108
>gi|414589541|tpg|DAA40112.1| TPA: hypothetical protein ZEAMMB73_900059 [Zea mays]
Length = 980
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
V VGL++D + G+IA + I M+L DFY + + TR+ + DS GDVVAAA+A +
Sbjct: 36 VTVGLIIDADSPVGRIASTTIPMALDDFYAALPNSSTRVQILQHDSGGDVVAAASAAL 93
>gi|357117258|ref|XP_003560389.1| PREDICTED: glutamate receptor 2.2-like [Brachypodium distachyon]
Length = 961
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 42/57 (73%)
Query: 10 NVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+VG++LD+ GK+A + I++++ DFY+ + +++T+L+L+ RDS G V AA+A I
Sbjct: 31 HVGVILDLGTLAGKVARTSISLAVEDFYSVHRNHRTKLVLHIRDSMGSDVQAASAAI 87
>gi|218202188|gb|EEC84615.1| hypothetical protein OsI_31452 [Oryza sativa Indica Group]
Length = 677
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 38/53 (71%)
Query: 11 VGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAA 63
VG++LD+ GKIA + I M+L DFY+ + +Y T+++L+ RD+K D V AA+
Sbjct: 77 VGVILDLQTLVGKIARTSILMALDDFYSVHKNYSTKIVLHIRDAKSDNVQAAS 129
>gi|357153738|ref|XP_003576550.1| PREDICTED: glutamate receptor 2.2-like [Brachypodium distachyon]
Length = 953
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 40/57 (70%)
Query: 10 NVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+VG++LD+ GK+A + + +++ DFY+ + +Y T+L+L+ RDS G V AA+A I
Sbjct: 29 HVGVILDLGSLVGKVARTSVALAVEDFYSVHPNYSTKLVLHIRDSMGSDVQAASAAI 85
>gi|326498867|dbj|BAK02419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 912
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 10 NVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKG-DVVAAAAAEILI 68
+VG++L++ GK+A + I++++ DFY ++ +Y T+L+L+ RDS G D+ AA+AA L+
Sbjct: 33 HVGVILNLGSLVGKVARTSISLAVEDFYAAHRNYSTKLVLHVRDSMGNDIQAASAAIELL 92
Query: 69 D 69
D
Sbjct: 93 D 93
>gi|357153735|ref|XP_003576549.1| PREDICTED: glutamate receptor 2.8-like [Brachypodium distachyon]
Length = 915
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDS-KGDVVA 60
SK ++VG++LD+ GKIA + I++++ DFY + +Y T+L+L+ RDS K DV A
Sbjct: 25 SKGGAQELHVGVILDLESMVGKIAQTSISLAMEDFYAIHHNYSTKLVLHIRDSMKDDVRA 84
Query: 61 AAAAEILID 69
A+ A L++
Sbjct: 85 ASQAVDLLE 93
>gi|222641620|gb|EEE69752.1| hypothetical protein OsJ_29449 [Oryza sativa Japonica Group]
Length = 634
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 40/56 (71%)
Query: 11 VGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
VG++LD+ GKIA + I M+L DFY ++++Y T+++L+ RDS + V AA+A +
Sbjct: 34 VGVILDLQTMVGKIARTSILMALDDFYAAHTNYSTKIVLHIRDSGSNNVQAASAAL 89
>gi|326514796|dbj|BAJ99759.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 939
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 5 TTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNS--NSHYKTRLLLNTRDSKGDVVAAA 62
T V VGL++D GK+A + I M+L DFY + NS ++ R+L DS GDVVAAA
Sbjct: 32 TPAEVRVGLIIDAASPVGKVANTTIPMALDDFYAAFPNSSFRVRIL--QHDSGGDVVAAA 89
Query: 63 AAEI 66
+A +
Sbjct: 90 SAAL 93
>gi|50726500|dbj|BAD34108.1| putative Avr9/Cf-9 rapidly elicited protein 141 [Oryza sativa
Japonica Group]
Length = 938
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 40/56 (71%)
Query: 11 VGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
VG++LD+ GKIA + I M+L DFY ++++Y T+++L+ RDS + V AA+A +
Sbjct: 34 VGVILDLQTMVGKIARTSILMALDDFYAAHTNYSTKIVLHIRDSGSNNVQAASAAL 89
>gi|125563802|gb|EAZ09182.1| hypothetical protein OsI_31453 [Oryza sativa Indica Group]
Length = 980
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 1 TSKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKG-DVV 59
T++ +VG++LD+ GK+A + I++++ DFY + +Y TRL+L+ RDS DV
Sbjct: 99 TTRGRAEEFHVGVILDLGSLVGKVARTSISLAVEDFYMVHRNYSTRLVLHFRDSMASDVR 158
Query: 60 AAAAAEILID 69
AA+AA L++
Sbjct: 159 AASAAVDLLE 168
>gi|449525140|ref|XP_004169576.1| PREDICTED: glutamate receptor 2.4-like [Cucumis sativus]
Length = 314
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 11 VGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDV--VAAAAAEILI 68
VG+VLD N GK++ I M+LSDFY N YKTR+ +D+ GDV VA+AA E+L
Sbjct: 33 VGVVLDHNTIVGKLSNISIQMALSDFYAENLKYKTRISFIFKDA-GDVVEVASAATELLR 91
Query: 69 D 69
D
Sbjct: 92 D 92
>gi|449464352|ref|XP_004149893.1| PREDICTED: glutamate receptor 2.4-like [Cucumis sativus]
Length = 314
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 11 VGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDV--VAAAAAEILI 68
VG+VLD N GK++ I M+LSDFY N YKTR+ +D+ GDV VA+AA E+L
Sbjct: 33 VGVVLDHNTIVGKLSNISIQMALSDFYAENLKYKTRISFIFKDA-GDVVEVASAATELLR 91
Query: 69 D 69
D
Sbjct: 92 D 92
>gi|125563804|gb|EAZ09184.1| hypothetical protein OsI_31456 [Oryza sativa Indica Group]
Length = 899
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 40/56 (71%)
Query: 11 VGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
VG++LD+ GKIA + I M+L DFY ++++Y T+++L+ RDS + V AA+A +
Sbjct: 34 VGVILDLQTMVGKIARTSILMALDDFYAAHTNYSTKIVLHIRDSGSNNVQAASAAL 89
>gi|242044750|ref|XP_002460246.1| hypothetical protein SORBIDRAFT_02g025330 [Sorghum bicolor]
gi|241923623|gb|EER96767.1| hypothetical protein SORBIDRAFT_02g025330 [Sorghum bicolor]
Length = 1016
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
V VGL++D + G+IA + I M+L DFY + + R+ L DS GDVVAAA+A +
Sbjct: 36 VAVGLIIDADSPVGRIASTTIPMALDDFYAAFPNASARVRLLQHDSGGDVVAAASAAL 93
>gi|414885563|tpg|DAA61577.1| TPA: hypothetical protein ZEAMMB73_209096 [Zea mays]
Length = 952
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 1 TSKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
TS+ T+ NVG++L++ GK+A + I M++ DFY + +Y T+L+L+ RDS D V
Sbjct: 24 TSEAATL--NVGVILNLQSLVGKMARTSILMAMEDFYAVHRNYTTKLVLHIRDSSADSVQ 81
Query: 61 AAAAEI 66
AA+ +
Sbjct: 82 AASEAV 87
>gi|326526859|dbj|BAK00818.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 952
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 5 TTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAA 64
T V VG ++D GKIA + I M+L DFY + + R+ + DS GDVVAAA+A
Sbjct: 29 TPTEVKVGFIIDAGSPVGKIATTTIPMALEDFYAAYPNSSARVRVLQHDSGGDVVAAASA 88
Query: 65 EI 66
+
Sbjct: 89 AL 90
>gi|326533906|dbj|BAJ93726.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 752
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
++VG++L + GK+A + I M++ DFY + +Y TRL+L+ RDS GD + AA+ +
Sbjct: 33 LDVGVILHLKSLVGKMARTSILMAMEDFYAVHRNYTTRLVLHIRDSNGDNIQAASQAV 90
>gi|357118458|ref|XP_003560971.1| PREDICTED: glutamate receptor 2.9-like [Brachypodium distachyon]
Length = 655
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAA-AAEIL 67
V VG+VLD+ + G+ CI+M+L DF+ + Y R+ L RDS+G++V A+ AA+ L
Sbjct: 9 VRVGVVLDLTSDAGRERRDCISMALDDFFLEHPSYAPRVELLVRDSRGEIVTASHAAKDL 68
Query: 68 ID 69
I+
Sbjct: 69 IN 70
>gi|222635109|gb|EEE65241.1| hypothetical protein OsJ_20410 [Oryza sativa Japonica Group]
Length = 926
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 14 VLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+LD+ GK ++ + M+L D Y ++ + TR+ L RDS+GDVVAAA+A I
Sbjct: 64 ILDLATALGKKSMLSMEMALEDVYAAHPEFATRVALRARDSRGDVVAAASAAI 116
>gi|357933571|dbj|BAL15052.1| glutamate receptor 2.5 [Solanum lycopersicum]
Length = 951
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 43/64 (67%)
Query: 5 TTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAA 64
+ + V++G++LD+ + GK+ +CI +++ D++ + SH TR++ + RDS+ D V A+A
Sbjct: 36 SAVKVDLGIILDMETDVGKVMHTCILLAIEDYHAAASHTATRIVPHLRDSEKDDVEEASA 95
Query: 65 EILI 68
I +
Sbjct: 96 AIYL 99
>gi|242049350|ref|XP_002462419.1| hypothetical protein SORBIDRAFT_02g025310 [Sorghum bicolor]
gi|241925796|gb|EER98940.1| hypothetical protein SORBIDRAFT_02g025310 [Sorghum bicolor]
Length = 972
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSK-GDVVAAAAA 64
+NVG++L++ GK+A + I M++ DFY + YKT+L+L+ RDS G+V AA+ A
Sbjct: 30 LNVGVILNLQSLVGKMAHTSILMAMEDFYAVHRDYKTKLVLHIRDSNAGNVQAASEA 86
>gi|449442138|ref|XP_004138839.1| PREDICTED: glutamate receptor 2.5-like [Cucumis sativus]
Length = 895
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 15 LDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVV 59
D++ G+++LSCI+M+L D Y+S S+YKTR++L++ DS VV
Sbjct: 31 FDLDSIFGEMSLSCISMALEDLYSSRSYYKTRVILHSIDSNDTVV 75
>gi|357153745|ref|XP_003576552.1| PREDICTED: glutamate receptor 2.7-like [Brachypodium distachyon]
Length = 978
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFY--NSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
V+VG++LD+ G + +C+ M+L DFY + + Y+TRL L+ RD+ D V AA+A +
Sbjct: 56 VDVGVILDMKTWLGNTSWACMEMALEDFYANATQARYRTRLKLHLRDTGPDAVDAASAGV 115
>gi|449493394|ref|XP_004159276.1| PREDICTED: glutamate receptor 2.5-like [Cucumis sativus]
Length = 906
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 15 LDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVV 59
D++ G+++LSCI+M+L D Y+S S+YKTR++L++ DS VV
Sbjct: 31 FDLDSIFGEMSLSCISMALEDLYSSRSYYKTRVILHSIDSNDTVV 75
>gi|21684646|gb|AAL61996.1| putative glutamate receptor protein GLR1.4b [Arabidopsis
thaliana]
gi|110737522|dbj|BAF00703.1| hypothetical protein [Arabidopsis thaliana]
Length = 808
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 34/46 (73%)
Query: 21 DGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+GK+ + I+M+LSDFY+ N+ Y+TR+ + +RDS GD + A AA +
Sbjct: 5 EGKLVTTSISMALSDFYHVNNGYRTRVSVLSRDSHGDPLQALAAAM 50
>gi|15238966|ref|NP_199652.1| glutamate receptor 1.3 [Arabidopsis thaliana]
gi|41017230|sp|Q9FH75.1|GLR13_ARATH RecName: Full=Glutamate receptor 1.3; AltName: Full=Ligand-gated
ion channel 1.3; Flags: Precursor
gi|9758208|dbj|BAA96961.2| ligand-gated ion channel protein-like; glutamate receptor-like
[Arabidopsis thaliana]
gi|20268735|gb|AAM14071.1| putative ligand-gated ion channel protein; glutamate receptor
[Arabidopsis thaliana]
gi|23296781|gb|AAN13168.1| putative ligand-gated ion channel protein; glutamate receptor
[Arabidopsis thaliana]
gi|332008284|gb|AED95667.1| glutamate receptor 1.3 [Arabidopsis thaliana]
Length = 860
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 40/60 (66%)
Query: 7 IPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
+ + VGLVLD+ GKI + ++M+LS FY ++ YKTR+ ++ R+S G+ + A A+ +
Sbjct: 40 VQIRVGLVLDLGSLKGKIVKNSVSMALSYFYAIHNDYKTRVSVSLRNSHGEPLLALASAV 99
>gi|297609509|ref|NP_001063231.2| Os09g0428300 [Oryza sativa Japonica Group]
gi|255678914|dbj|BAF25145.2| Os09g0428300 [Oryza sativa Japonica Group]
Length = 708
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 10 NVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAA 64
+VG+VLD+ K+A + +++++ DF + Y TRL+L+ RDS GD V AA+A
Sbjct: 33 HVGVVLDLGTTVAKVARTSMSLAVEDFNAVHPSYTTRLVLHVRDSMGDDVQAASA 87
>gi|326519122|dbj|BAJ96560.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 982
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNS--NSHYKTRLLLNTRDSKGDVVAAAAAEI 66
V+VG++LD G I+L+C+ +L DFY + Y+TRL L+ RD+ V AA+A +
Sbjct: 50 VDVGVILDSKTWAGNISLACMEQALEDFYADAGRARYRTRLKLHLRDTGPSAVDAASAGV 109
>gi|296083778|emb|CBI23995.3| unnamed protein product [Vitis vinifera]
Length = 891
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 31 MSLSDFYNSNSHYKTRLLLNTRDSKGDVVA 60
M+LSDFY S+ HYKTRL+L RDSK DV+
Sbjct: 1 MALSDFYASHGHYKTRLVLEIRDSKRDVMG 30
>gi|297798802|ref|XP_002867285.1| ATGLR2.1 [Arabidopsis lyrata subsp. lyrata]
gi|297313121|gb|EFH43544.1| ATGLR2.1 [Arabidopsis lyrata subsp. lyrata]
Length = 885
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLL 48
VNVG+V D+ + L CINMSLSDFY+S++ +TRL+
Sbjct: 32 VNVGIVNDVGMAYSNMTLLCINMSLSDFYSSHTETQTRLV 71
>gi|297825457|ref|XP_002880611.1| ATGLR2.3 [Arabidopsis lyrata subsp. lyrata]
gi|297326450|gb|EFH56870.1| ATGLR2.3 [Arabidopsis lyrata subsp. lyrata]
Length = 841
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 31 MSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
MSL+DFY+S ++TRL++N DSK DVV AA A +
Sbjct: 1 MSLADFYSSRPQFRTRLVVNVGDSKKDVVGAAIAAL 36
>gi|242049346|ref|XP_002462417.1| hypothetical protein SORBIDRAFT_02g025280 [Sorghum bicolor]
gi|241925794|gb|EER98938.1| hypothetical protein SORBIDRAFT_02g025280 [Sorghum bicolor]
Length = 608
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 39/55 (70%)
Query: 10 NVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAA 64
+VG++LD+ GK+ + ++++L DFY S+ + T+++L+ +DS G+ V AA+A
Sbjct: 33 HVGVILDLGSPVGKVGRTSVSLALEDFYASHRNCSTKVVLHFKDSAGNDVQAASA 87
>gi|357933567|dbj|BAL15050.1| glutamate receptor 2.3 [Solanum lycopersicum]
Length = 962
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
SK++ + V+VG++LD+ E GK+ I ++L+D+++ + R++ + RDSK D V A
Sbjct: 33 SKHSAVKVDVGIILDLETEVGKVMHISILLALADYHSRGA---IRIVPHIRDSKKDDVEA 89
Query: 62 AAAEILI 68
A+A I +
Sbjct: 90 ASAAIYL 96
>gi|449464362|ref|XP_004149898.1| PREDICTED: glutamate receptor 2.7-like [Cucumis sativus]
Length = 736
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDV--VAAAAAEI 66
V VG+VLD N G ++ + I M+LSDFY N YKT + + + GDV VA+AA E+
Sbjct: 63 VKVGVVLDPNTTVGILSNTSIQMALSDFYAKNLKYKTSISFIFKGA-GDVVEVASAATEL 121
Query: 67 LID 69
L D
Sbjct: 122 LRD 124
>gi|357933569|dbj|BAL15051.1| glutamate receptor 2.4 [Solanum lycopersicum]
Length = 983
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 41/67 (61%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
+K + V+VG++LD+ + GK+ I ++L D++ + S R++ + RDSK D V A
Sbjct: 33 NKTSVAKVDVGIILDLETDMGKVMHISILLALDDYHATASGSAIRIVPHLRDSKKDDVEA 92
Query: 62 AAAEILI 68
A+A I +
Sbjct: 93 ASAAIYL 99
>gi|115449127|ref|NP_001048343.1| Os02g0787600 [Oryza sativa Japonica Group]
gi|47497756|dbj|BAD19856.1| putative glutamate receptor subunit kainate subtype [Oryza sativa
Japonica Group]
gi|113537874|dbj|BAF10257.1| Os02g0787600 [Oryza sativa Japonica Group]
Length = 988
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
V VG++L++ G I M++ D+Y +N TR+ L+ RDS GDV+ AA+A +
Sbjct: 41 VRVGVILNLTSAVGVRRRVGIQMAVEDYYAANPGSATRVELHFRDSAGDVLPAASAAV 98
>gi|222623812|gb|EEE57944.1| hypothetical protein OsJ_08660 [Oryza sativa Japonica Group]
Length = 966
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
V VG++L++ G I M++ D+Y +N TR+ L+ RDS GDV+ AA+A +
Sbjct: 41 VRVGVILNLTSAVGVRRRVGIQMAVEDYYAANPGSATRVELHFRDSAGDVLPAASAAV 98
>gi|326496825|dbj|BAJ98439.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1011
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 7 IPVNVGLVLD-INGEDGKIAL---SCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAA 62
+PV VG++LD ++L + I M++ D+Y ++ R+ L+ RDSKGDVV AA
Sbjct: 47 VPVRVGVILDWATRASSAVSLRRRTGIEMAVEDYYAAHPGSAARVELHFRDSKGDVVGAA 106
Query: 63 AAEI 66
+A +
Sbjct: 107 SAAL 110
>gi|414885564|tpg|DAA61578.1| TPA: hypothetical protein ZEAMMB73_408739 [Zea mays]
Length = 175
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSH--YKTRLLLNTRDSKGDVVAAAAA 64
V+VG++LD G I+ +C+ ++L DFY SH Y TR+ L+ RD+ A AA
Sbjct: 52 VDVGVILDRTTWLGNISWACMELALHDFYADASHANYSTRVKLHLRDTPAGPSAVDAA 109
>gi|125541405|gb|EAY87800.1| hypothetical protein OsI_09220 [Oryza sativa Indica Group]
Length = 952
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAA 64
V VG++L++ G I M++ D+Y +N TR+ L+ RDS GDV+ AA+A
Sbjct: 41 VRVGVILNLTSAVGVRRRVGIQMAVEDYYAANPGSATRVELHFRDSAGDVLPAASA 96
>gi|242063318|ref|XP_002452948.1| hypothetical protein SORBIDRAFT_04g035400 [Sorghum bicolor]
gi|241932779|gb|EES05924.1| hypothetical protein SORBIDRAFT_04g035400 [Sorghum bicolor]
Length = 1004
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
V VG++L++ G+ I M++ D+Y + TR+ L RDS GDVV AA+A +
Sbjct: 61 VRVGVILNLTSLVGQRRKVGIEMAVEDYYAAFPGSSTRVALRFRDSDGDVVGAASAAV 118
>gi|30013669|gb|AAP03877.1| Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana tabacum]
Length = 952
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 4 NTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAA 63
N V+VG++LD+ K+ +CI ++L D++ +N R++ + RDSK D V AA+
Sbjct: 35 NAVKQVDVGIILDMETTVAKVMHTCILLALEDYHAANRS-AIRMVPHFRDSKIDDVEAAS 93
Query: 64 AEILI 68
A I +
Sbjct: 94 AAIYL 98
>gi|357130330|ref|XP_003566802.1| PREDICTED: glutamate receptor 2.7-like [Brachypodium distachyon]
Length = 975
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
V VG++LD+ G + I M+ D+Y ++ T + L+ RDS+GDV+ AA+A +
Sbjct: 41 VRVGVILDLTSPVGHKRRTGIQMAAEDYYAAHPGSATNVELHFRDSEGDVLRAASAVV 98
>gi|125563814|gb|EAZ09194.1| hypothetical protein OsI_31466 [Oryza sativa Indica Group]
Length = 950
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 11 VGLVLDINGEDGKIALSCINMSLSDFY--NSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
VG++LD G I+ +C+ +++ DFY + Y T L L+ RD++ D V AA+A +
Sbjct: 50 VGVILDRRTWLGNISWACMELAVEDFYADEERASYTTALRLHLRDTRLDAVDAASAGV 107
>gi|115479287|ref|NP_001063237.1| Os09g0431200 [Oryza sativa Japonica Group]
gi|50726228|dbj|BAD33805.1| putative Avr9/Cf-9 rapidly elicited protein 141 [Oryza sativa
Japonica Group]
gi|113631470|dbj|BAF25151.1| Os09g0431200 [Oryza sativa Japonica Group]
gi|125605786|gb|EAZ44822.1| hypothetical protein OsJ_29459 [Oryza sativa Japonica Group]
Length = 950
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 11 VGLVLDINGEDGKIALSCINMSLSDFY--NSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
VG++LD G I+ +C+ +++ DFY + Y T L L+ RD++ D V AA+A +
Sbjct: 50 VGVILDRRTWLGNISWACMELAVEDFYADEERASYTTALRLHLRDTRLDAVDAASAGV 107
>gi|357933563|dbj|BAL15048.1| glutamate receptor 2.1 [Solanum lycopersicum]
Length = 965
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 41/65 (63%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
+K + I V+VG++LD+ GK+ I ++L+D++ + S +++ + RDSK + V A
Sbjct: 33 NKTSAIEVDVGIILDLETNVGKVMNISILLALADYHANASRGAIKIVPHFRDSKRNDVEA 92
Query: 62 AAAEI 66
A++ I
Sbjct: 93 ASSAI 97
>gi|224142045|ref|XP_002324369.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222865803|gb|EEF02934.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 264
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 36 FYNSNSHYKTRLLLNTRDSKGDVVAAAAA 64
Y ++ YKTRL+L TRDSK DVV AAAA
Sbjct: 6 LYATHGGYKTRLILTTRDSKRDVVGAAAA 34
>gi|357933565|dbj|BAL15049.1| glutamate receptor 2.2 [Solanum lycopersicum]
Length = 980
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 40/67 (59%)
Query: 2 SKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
+ + + V+VG++LD+ + GK+ I ++L D++ + S R++ + +DSK + V A
Sbjct: 47 NNTSAVKVDVGIILDLERDVGKVMHISILLALEDYHANTSRGDIRIVAHIKDSKKNDVEA 106
Query: 62 AAAEILI 68
+A I +
Sbjct: 107 TSAAIYL 113
>gi|413939259|gb|AFW73810.1| hypothetical protein ZEAMMB73_119256 [Zea mays]
Length = 1003
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 29 INMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
I M++ D+Y + +TR+ L RDS GDVVAA +A +
Sbjct: 78 IEMAVEDYYAARPGSRTRVALRFRDSAGDVVAATSAAV 115
>gi|449457227|ref|XP_004146350.1| PREDICTED: glutamate receptor 2.7-like [Cucumis sativus]
Length = 859
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query: 31 MSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
M+L+DFY +S+Y+ +L+L+ RDS+ D+VAA +A +
Sbjct: 1 MALTDFYAFHSNYRNKLVLHFRDSQ-DMVAATSAVV 35
>gi|218197727|gb|EEC80154.1| hypothetical protein OsI_21964 [Oryza sativa Indica Group]
Length = 892
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 11/65 (16%)
Query: 11 VGLVLDINGED----GKIALSCINMSLSDFY-------NSNSHYKTRLLLNTRDSKGDVV 59
VG+V+D+ + G+ + +C++M+L D+Y + R+ L RDS+GDVV
Sbjct: 47 VGVVMDLTSDATSDAGRKSAACVSMALDDYYYAAQAHDADAAAAAARVELFVRDSRGDVV 106
Query: 60 AAAAA 64
AA A
Sbjct: 107 TAADA 111
>gi|356546834|ref|XP_003541827.1| PREDICTED: glutamate receptor 2.8-like [Glycine max]
Length = 891
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 11 VGLVLDINGEDGKIALSCINMSLSDFYN-SNSHYKTRLLLNTRDSKGDVVAAA-AAEILI 68
+G++ D +GK + I M+L DFY SN ++ L L R+S GD + AA AA LI
Sbjct: 58 IGVITDNKSRNGKEEIVAIKMALEDFYQYSNQNFG--LDLQIRNSHGDPLQAALAARDLI 115
Query: 69 D 69
D
Sbjct: 116 D 116
>gi|356514633|ref|XP_003526010.1| PREDICTED: glutamate receptor 2.1-like [Glycine max]
Length = 826
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 11 VGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGD-VVAAAAAEILID 69
+G +LD + G+ IN++L DF+ N+ L+ R+S+GD ++AA AA LID
Sbjct: 33 IGAILDSSSRIGQEHAVAINLALEDFHQKNN---LSFALHVRNSQGDPLLAATAARDLID 89
>gi|357153748|ref|XP_003576553.1| PREDICTED: glutamate receptor 2.7-like [Brachypodium distachyon]
Length = 899
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVV 59
V VGL+++ GKI + I M+L DFY + + R+ + DS G+ V
Sbjct: 38 VKVGLIINATSPVGKIVSTTIPMALQDFYATFPDSRARVQILQHDSGGETV 88
>gi|413939253|gb|AFW73804.1| hypothetical protein ZEAMMB73_415810 [Zea mays]
Length = 1000
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 10/71 (14%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGD----------V 58
VNVG++LD+ G+ + I+M++ D+Y ++++ TR+ L+ RDS GD +
Sbjct: 33 VNVGVILDLASAPGRRWRTSISMAVEDYYATHTNSTTRVDLHFRDSSGDAVAAASAAVDL 92
Query: 59 VAAAAAEILID 69
+ A A+ +ID
Sbjct: 93 IRNAKAQAIID 103
>gi|357143181|ref|XP_003572831.1| PREDICTED: glutamate receptor 2.7-like [Brachypodium distachyon]
Length = 1007
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 29 INMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
I M++ D+Y ++ ++ L+ RDS GDVV AA+A +
Sbjct: 68 IEMAVEDYYAAHPGSPAKVELHFRDSSGDVVGAASAAV 105
>gi|357143339|ref|XP_003572886.1| PREDICTED: glutamate receptor 2.7-like [Brachypodium distachyon]
Length = 1017
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 29 INMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEI 66
I M++ D+Y ++ ++ L+ RDS GDVV AA+A +
Sbjct: 76 IQMAVEDYYAAHPGSAAKVELHFRDSAGDVVGAASAAV 113
>gi|357446865|ref|XP_003593708.1| Glutamate-gated kainate-type ion channel receptor subunit GluR5
[Medicago truncatula]
gi|355482756|gb|AES63959.1| Glutamate-gated kainate-type ion channel receptor subunit GluR5
[Medicago truncatula]
Length = 635
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Query: 1 TSKNTTIPVNVGLVLDINGEDGKIALSCINMSLSDFYN-SNSHYKTRLLLNTRDS-KGDV 58
+S+ TT +VG+++D+N E GK + + ++ F N SN+H ++L RDS K +
Sbjct: 34 SSQTTT---SVGVIIDVNSEIGKNQKTAMQIAAQSFNNYSNNH---NIILFFRDSGKNPL 87
Query: 59 VAAAAAEILIDQ 70
AA+AAE LI +
Sbjct: 88 QAASAAEDLITK 99
>gi|323509805|dbj|BAJ77795.1| cgd6_1470 [Cryptosporidium parvum]
Length = 329
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 30 NMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEILID 69
++S + +SNSH+ TRL+L+ SKG+++ EIL D
Sbjct: 120 HISSDNLKDSNSHHSTRLILSDNVSKGELIIECIGEILTD 159
>gi|302142936|emb|CBI20231.3| unnamed protein product [Vitis vinifera]
Length = 781
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 10 NVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++G+++D GK + +++ DFY + RL+L++RDS+GD + A
Sbjct: 38 SIGVIVDYGSRVGKEEKVAMELAIDDFYKKTNQ---RLVLHSRDSQGDPLRA 86
>gi|225461585|ref|XP_002282893.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
Length = 876
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 10 NVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAA 61
++G+++D GK + +++ DFY + RL+L++RDS+GD + A
Sbjct: 38 SIGVIVDYGSRVGKEEKVAMELAIDDFYKKTNQ---RLVLHSRDSQGDPLRA 86
>gi|323508961|dbj|BAJ77373.1| cgd6_1470 [Cryptosporidium parvum]
Length = 322
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 30 NMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEILID 69
++S + +SNSH+ TRL+L+ SKG+++ EIL D
Sbjct: 120 HISSDNLKDSNSHHSTRLILSDNVSKGELIIECIGEILTD 159
>gi|66475398|ref|XP_627515.1| protein with SET domain flanked by cysteine clusters plus a
C-terminal PHD domain [Cryptosporidium parvum Iowa II]
gi|46228971|gb|EAK89820.1| protein with SET domain flanked by cysteine clusters plus a
C-terminal PHD domain [Cryptosporidium parvum Iowa II]
Length = 879
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 30 NMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEILID 69
++S + +SNSH+ TRL+L+ SKG+++ EIL D
Sbjct: 120 HISSDNLKDSNSHHSTRLILSDNVSKGELIIECIGEILTD 159
>gi|32398732|emb|CAD98692.1| hypothetical predicted SET domain protein, unknown function
[Cryptosporidium parvum]
Length = 867
Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 30 NMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAAEILID 69
++S + +SNSH+ TRL+L+ SKG+++ EIL D
Sbjct: 120 HISSDNLKDSNSHHSTRLILSDNVSKGELIIECIGEILTD 159
>gi|242049352|ref|XP_002462420.1| hypothetical protein SORBIDRAFT_02g025320 [Sorghum bicolor]
gi|241925797|gb|EER98941.1| hypothetical protein SORBIDRAFT_02g025320 [Sorghum bicolor]
Length = 900
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 9 VNVGLVLDINGEDGKIALSCINMSLSDFYNSNSHYKTRLLLNTRDSKGDVVAAAAA 64
++VG +LD+ G+ + + I+++L DFY S T + L+ D K D + AA+A
Sbjct: 48 LHVGALLDLGSTGGRESRASISLALDDFYASRQP-DTTVELHVADCKDDEITAASA 102
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.130 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,025,841,562
Number of Sequences: 23463169
Number of extensions: 31617126
Number of successful extensions: 51942
Number of sequences better than 100.0: 222
Number of HSP's better than 100.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 51727
Number of HSP's gapped (non-prelim): 226
length of query: 70
length of database: 8,064,228,071
effective HSP length: 42
effective length of query: 28
effective length of database: 7,078,774,973
effective search space: 198205699244
effective search space used: 198205699244
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)