Query 041665
Match_columns 206
No_of_seqs 300 out of 1749
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 16:03:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041665.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041665hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 100.0 1.2E-42 4.1E-47 283.3 20.2 184 22-206 1-201 (201)
2 3kgl_A Cruciferin; 11S SEED gl 100.0 1.2E-29 4.2E-34 228.8 14.9 143 56-201 298-443 (466)
3 3ksc_A LEGA class, prolegumin; 100.0 4.4E-29 1.5E-33 226.6 16.5 157 42-201 318-478 (496)
4 3qac_A 11S globulin SEED stora 100.0 7.7E-29 2.6E-33 223.5 14.2 146 54-202 296-444 (465)
5 2e9q_A 11S globulin subunit be 100.0 1.3E-28 4.5E-33 222.4 14.0 145 55-202 296-443 (459)
6 3fz3_A Prunin; TREE NUT allerg 100.0 1.3E-28 4.3E-33 223.9 13.7 156 44-202 356-515 (531)
7 1fxz_A Glycinin G1; proglycini 100.0 2.9E-27 1E-31 214.5 18.0 146 55-203 312-460 (476)
8 3c3v_A Arachin ARAH3 isoform; 99.9 2E-27 7E-32 216.5 16.2 146 55-203 346-494 (510)
9 2d5f_A Glycinin A3B4 subunit; 99.9 2.7E-27 9.2E-32 215.5 14.7 154 46-203 331-486 (493)
10 1uij_A Beta subunit of beta co 99.9 1.1E-26 3.6E-31 208.0 14.1 157 41-202 210-384 (416)
11 2cav_A Protein (canavalin); vi 99.9 1.3E-26 4.4E-31 208.9 13.8 158 41-203 242-414 (445)
12 2ea7_A 7S globulin-1; beta bar 99.9 3.4E-26 1.2E-30 205.7 13.6 159 39-202 225-400 (434)
13 1dgw_A Canavalin; duplicated s 99.9 1.4E-25 4.7E-30 179.4 14.5 151 45-201 3-167 (178)
14 3s7i_A Allergen ARA H 1, clone 99.9 4.7E-25 1.6E-29 197.2 11.5 154 44-202 226-409 (418)
15 2vqa_A SLL1358 protein, MNCA; 99.9 1.7E-23 5.7E-28 183.0 17.1 161 38-204 194-354 (361)
16 2phl_A Phaseolin; plant SEED s 99.9 2.6E-23 8.8E-28 184.8 13.6 134 59-202 223-372 (397)
17 2cav_A Protein (canavalin); vi 99.9 5.1E-23 1.7E-27 185.5 14.8 156 41-201 44-212 (445)
18 2ea7_A 7S globulin-1; beta bar 99.9 3.1E-22 1.1E-26 179.9 13.8 152 43-199 20-185 (434)
19 1uij_A Beta subunit of beta co 99.9 2.5E-22 8.7E-27 179.7 12.8 154 43-201 8-176 (416)
20 2e9q_A 11S globulin subunit be 99.9 2.9E-22 1E-26 181.0 11.9 139 61-203 44-237 (459)
21 2phl_A Phaseolin; plant SEED s 99.9 9.1E-22 3.1E-26 174.9 13.0 152 43-199 11-181 (397)
22 1fxz_A Glycinin G1; proglycini 99.9 9.2E-22 3.1E-26 178.5 11.4 139 61-203 29-229 (476)
23 3s7i_A Allergen ARA H 1, clone 99.9 4E-21 1.4E-25 171.7 14.6 137 59-200 19-169 (418)
24 3qac_A 11S globulin SEED stora 99.8 4.1E-21 1.4E-25 173.2 12.3 138 60-201 30-237 (465)
25 2vqa_A SLL1358 protein, MNCA; 99.8 6.6E-20 2.3E-24 160.1 15.7 149 46-201 21-172 (361)
26 3ksc_A LEGA class, prolegumin; 99.8 2.1E-20 7.1E-25 169.7 12.0 135 61-199 27-214 (496)
27 1j58_A YVRK protein; cupin, de 99.8 2.8E-19 9.7E-24 157.6 17.6 156 42-204 222-377 (385)
28 3kgl_A Cruciferin; 11S SEED gl 99.8 3.5E-20 1.2E-24 167.2 11.4 138 60-201 23-245 (466)
29 2d5f_A Glycinin A3B4 subunit; 99.8 4.7E-20 1.6E-24 167.8 12.0 138 62-203 27-232 (493)
30 3c3v_A Arachin ARAH3 isoform; 99.8 1E-19 3.5E-24 165.8 11.5 137 61-201 29-269 (510)
31 1j58_A YVRK protein; cupin, de 99.8 5.2E-19 1.8E-23 155.9 10.6 147 46-200 48-196 (385)
32 3fz3_A Prunin; TREE NUT allerg 99.8 1E-18 3.4E-23 159.0 10.5 138 60-201 28-297 (531)
33 1dgw_X Canavalin; duplicated s 99.6 1.4E-16 4.7E-21 111.1 4.4 74 48-122 4-77 (79)
34 3h8u_A Uncharacterized conserv 99.6 1.6E-15 5.5E-20 112.9 9.7 83 80-168 38-121 (125)
35 3l2h_A Putative sugar phosphat 99.6 1.1E-14 3.7E-19 113.5 11.1 87 79-171 44-132 (162)
36 2fqp_A Hypothetical protein BP 99.6 6.3E-15 2.2E-19 105.6 8.8 78 79-160 16-93 (97)
37 1v70_A Probable antibiotics sy 99.5 2E-14 6.7E-19 102.4 9.0 79 78-162 25-103 (105)
38 2oa2_A BH2720 protein; 1017534 99.5 7.6E-14 2.6E-18 107.4 12.0 84 79-163 41-125 (148)
39 3i7d_A Sugar phosphate isomera 99.5 3.6E-14 1.2E-18 111.4 10.3 89 77-171 39-130 (163)
40 3kgz_A Cupin 2 conserved barre 99.5 1.8E-13 6.1E-18 106.9 13.6 79 79-164 42-120 (156)
41 1lr5_A Auxin binding protein 1 99.5 1E-13 3.6E-18 108.0 11.9 85 80-166 40-129 (163)
42 2xlg_A SLL1785 protein, CUCA; 99.5 2.2E-14 7.4E-19 119.5 8.3 83 77-160 39-137 (239)
43 3ibm_A Cupin 2, conserved barr 99.5 3.6E-13 1.2E-17 106.1 13.6 117 39-163 12-132 (167)
44 3es1_A Cupin 2, conserved barr 99.5 5.8E-14 2E-18 111.4 9.0 79 79-165 77-156 (172)
45 3ht1_A REMF protein; cupin fol 99.5 1.1E-13 3.6E-18 105.0 10.1 83 78-167 36-120 (145)
46 3fjs_A Uncharacterized protein 99.5 3.6E-14 1.2E-18 104.8 7.2 76 78-160 33-108 (114)
47 2gu9_A Tetracenomycin polyketi 99.5 9.8E-14 3.3E-18 100.5 9.3 79 79-163 19-99 (113)
48 1x82_A Glucose-6-phosphate iso 99.5 4.8E-13 1.7E-17 107.5 13.9 84 79-163 65-156 (190)
49 3lag_A Uncharacterized protein 99.5 9.7E-15 3.3E-19 105.5 3.3 81 76-159 12-92 (98)
50 2bnm_A Epoxidase; oxidoreducta 99.5 2.7E-13 9.1E-18 108.5 11.0 84 74-160 110-197 (198)
51 1o4t_A Putative oxalate decarb 99.5 2.6E-13 8.7E-18 102.7 9.6 78 77-160 53-130 (133)
52 2b8m_A Hypothetical protein MJ 99.5 3.5E-13 1.2E-17 99.1 9.9 74 80-160 26-100 (117)
53 3jzv_A Uncharacterized protein 99.5 4.7E-13 1.6E-17 105.5 11.1 78 79-163 51-128 (166)
54 2f4p_A Hypothetical protein TM 99.4 9.6E-13 3.3E-17 101.3 11.8 79 78-163 45-124 (147)
55 4e2g_A Cupin 2 conserved barre 99.4 2.8E-13 9.7E-18 100.6 7.9 77 79-163 39-115 (126)
56 1vj2_A Novel manganese-contain 99.4 3E-13 1E-17 101.2 7.7 77 78-161 45-121 (126)
57 4i4a_A Similar to unknown prot 99.4 1.5E-12 5.2E-17 96.9 10.1 75 79-160 32-106 (128)
58 3cew_A Uncharacterized cupin p 99.4 5.4E-13 1.9E-17 99.3 7.6 80 78-163 23-103 (125)
59 2o8q_A Hypothetical protein; c 99.4 1.3E-12 4.4E-17 98.2 9.6 78 81-165 43-121 (134)
60 2ozi_A Hypothetical protein RP 99.4 4.2E-13 1.4E-17 97.0 6.6 80 78-160 14-93 (98)
61 1y9q_A Transcriptional regulat 99.4 7.8E-13 2.7E-17 105.5 8.6 78 77-162 100-179 (192)
62 2vpv_A Protein MIF2, MIF2P; nu 99.4 8E-13 2.7E-17 104.2 8.5 75 80-160 87-162 (166)
63 2pfw_A Cupin 2, conserved barr 99.4 1.5E-12 5.2E-17 95.1 8.8 75 80-163 33-107 (116)
64 1rc6_A Hypothetical protein YL 99.4 1.4E-12 4.8E-17 109.2 9.1 78 78-161 176-254 (261)
65 1yhf_A Hypothetical protein SP 99.4 2.4E-12 8.1E-17 94.0 8.7 73 79-160 38-110 (115)
66 3h7j_A Bacilysin biosynthesis 99.3 1.5E-12 5.1E-17 108.1 7.9 79 80-165 144-223 (243)
67 2ozj_A Cupin 2, conserved barr 99.3 5.6E-12 1.9E-16 92.1 9.6 72 80-160 37-108 (114)
68 1sef_A Conserved hypothetical 99.3 1.5E-11 5.3E-16 103.7 11.8 76 78-160 179-256 (274)
69 3lwc_A Uncharacterized protein 99.3 1.7E-11 5.8E-16 91.4 10.4 74 79-161 38-111 (119)
70 2q30_A Uncharacterized protein 99.3 6.8E-12 2.3E-16 90.4 7.4 75 79-161 31-107 (110)
71 1sfn_A Conserved hypothetical 99.3 4.2E-11 1.4E-15 99.7 11.7 77 78-161 162-239 (246)
72 1juh_A Quercetin 2,3-dioxygena 99.2 5.1E-11 1.7E-15 104.1 12.0 81 80-163 47-130 (350)
73 1y3t_A Hypothetical protein YX 99.2 2.3E-11 7.7E-16 104.5 9.5 78 79-163 44-121 (337)
74 2i45_A Hypothetical protein; n 99.2 1.2E-11 4E-16 89.5 6.4 68 83-159 30-98 (107)
75 1sq4_A GLXB, glyoxylate-induce 99.2 1.5E-11 5.2E-16 104.3 7.9 77 78-161 65-143 (278)
76 3h7j_A Bacilysin biosynthesis 99.2 1.7E-11 5.7E-16 101.7 8.0 72 82-160 35-107 (243)
77 1rc6_A Hypothetical protein YL 99.2 1.5E-11 5.1E-16 103.0 7.4 77 79-161 57-134 (261)
78 2opk_A Hypothetical protein; p 99.2 3.7E-11 1.2E-15 88.4 8.5 75 80-161 30-109 (112)
79 2pyt_A Ethanolamine utilizatio 99.2 1.9E-11 6.5E-16 92.9 6.9 71 80-161 56-126 (133)
80 4e2q_A Ureidoglycine aminohydr 99.2 5.8E-11 2E-15 100.1 9.9 103 39-160 38-141 (266)
81 3d82_A Cupin 2, conserved barr 99.2 2.6E-11 8.9E-16 86.2 6.6 63 78-149 30-92 (102)
82 1sef_A Conserved hypothetical 99.2 2.8E-11 9.6E-16 102.1 7.5 77 78-160 59-136 (274)
83 3rns_A Cupin 2 conserved barre 99.2 6.4E-11 2.2E-15 97.3 9.1 73 80-160 152-224 (227)
84 2d40_A Z3393, putative gentisa 99.2 1.4E-10 4.6E-15 101.6 11.6 89 61-160 249-338 (354)
85 2d40_A Z3393, putative gentisa 99.2 2.6E-11 8.9E-16 106.2 6.3 76 79-161 98-174 (354)
86 4b29_A Dimethylsulfoniopropion 99.2 8.9E-11 3.1E-15 95.8 8.5 78 77-161 128-205 (217)
87 3rns_A Cupin 2 conserved barre 99.1 1.8E-10 6.3E-15 94.5 9.6 73 80-161 36-108 (227)
88 4axo_A EUTQ, ethanolamine util 99.1 1.7E-10 5.7E-15 89.6 8.5 73 80-163 65-137 (151)
89 1sq4_A GLXB, glyoxylate-induce 99.1 2.1E-10 7.3E-15 97.2 10.0 84 72-162 182-266 (278)
90 1y3t_A Hypothetical protein YX 99.1 3.9E-10 1.3E-14 96.7 11.5 75 83-164 219-294 (337)
91 4h7l_A Uncharacterized protein 99.1 1.8E-10 6E-15 89.9 8.3 71 81-163 47-119 (157)
92 1vr3_A Acireductone dioxygenas 99.1 1.7E-09 5.7E-14 87.0 13.0 80 82-163 75-164 (191)
93 4e2q_A Ureidoglycine aminohydr 99.1 8.6E-10 3E-14 93.0 11.5 75 78-159 183-258 (266)
94 3bu7_A Gentisate 1,2-dioxygena 99.1 1E-09 3.6E-14 97.2 12.3 75 79-160 292-367 (394)
95 3nw4_A Gentisate 1,2-dioxygena 99.0 3.1E-10 1.1E-14 99.6 7.2 76 79-161 101-177 (368)
96 1o5u_A Novel thermotoga mariti 99.0 4.8E-10 1.6E-14 81.2 6.7 59 85-151 35-94 (101)
97 3bu7_A Gentisate 1,2-dioxygena 99.0 9.6E-10 3.3E-14 97.4 9.1 77 78-160 120-197 (394)
98 1yfu_A 3-hydroxyanthranilate-3 99.0 3.6E-09 1.2E-13 83.3 10.9 70 77-149 32-101 (174)
99 1sfn_A Conserved hypothetical 99.0 1.4E-09 5E-14 90.3 8.1 71 79-160 48-118 (246)
100 3bcw_A Uncharacterized protein 99.0 1E-09 3.5E-14 82.3 6.4 73 80-160 48-120 (123)
101 2q1z_B Anti-sigma factor CHRR, 98.9 4.1E-09 1.4E-13 84.9 7.8 70 81-161 125-194 (195)
102 3eqe_A Putative cystein deoxyg 98.9 6E-08 2E-12 76.6 13.5 86 80-166 68-157 (171)
103 1zrr_A E-2/E-2' protein; nicke 98.8 2.8E-09 9.6E-14 84.9 4.4 69 94-166 93-161 (179)
104 3ebr_A Uncharacterized RMLC-li 98.8 8.6E-09 3E-13 80.5 7.1 73 80-161 41-115 (159)
105 2y0o_A Probable D-lyxose ketol 98.8 1.2E-08 4.2E-13 80.8 8.0 81 80-163 52-154 (175)
106 2o1q_A Putative acetyl/propion 98.8 2.6E-09 9E-14 82.0 4.0 75 82-163 45-120 (145)
107 3cjx_A Protein of unknown func 98.7 1.6E-08 5.6E-13 79.4 6.4 74 80-161 42-117 (165)
108 3d0j_A Uncharacterized protein 98.7 3.8E-08 1.3E-12 74.8 8.0 70 82-151 26-102 (140)
109 1juh_A Quercetin 2,3-dioxygena 98.7 5.6E-08 1.9E-12 84.7 10.0 76 78-161 246-325 (350)
110 1zvf_A 3-hydroxyanthranilate 3 98.7 9.8E-08 3.3E-12 75.0 10.2 62 88-151 41-106 (176)
111 1dgw_Y Canavalin; duplicated s 98.7 1.6E-07 5.3E-12 67.0 9.7 74 125-202 6-83 (93)
112 2gm6_A Cysteine dioxygenase ty 98.7 2.9E-07 9.9E-12 74.8 12.4 82 80-163 78-168 (208)
113 3st7_A Capsular polysaccharide 98.6 1.7E-07 5.8E-12 80.9 10.4 76 82-160 273-353 (369)
114 2qnk_A 3-hydroxyanthranilate 3 98.6 2.4E-07 8.4E-12 77.9 9.9 68 81-151 32-99 (286)
115 3nw4_A Gentisate 1,2-dioxygena 98.6 3E-07 1E-11 80.7 10.8 87 62-159 260-348 (368)
116 3eln_A Cysteine dioxygenase ty 98.5 1.6E-06 5.5E-11 70.0 13.2 88 80-168 69-165 (200)
117 2arc_A ARAC, arabinose operon 98.5 7.6E-07 2.6E-11 67.7 10.5 59 95-160 32-91 (164)
118 3o14_A Anti-ecfsigma factor, C 98.5 5.1E-07 1.7E-11 74.1 9.5 88 61-165 27-114 (223)
119 3bal_A Acetylacetone-cleaving 98.4 3.2E-07 1.1E-11 71.2 6.5 118 29-160 2-119 (153)
120 3uss_A Putative uncharacterize 98.3 2E-05 6.9E-10 64.1 13.2 83 80-164 72-163 (211)
121 2pa7_A DTDP-6-deoxy-3,4-keto-h 98.2 2.7E-05 9.3E-10 59.4 12.3 104 61-169 16-122 (141)
122 3myx_A Uncharacterized protein 98.1 1.1E-05 3.6E-10 66.8 9.6 73 79-161 45-117 (238)
123 3ejk_A DTDP sugar isomerase; Y 98.0 7.9E-05 2.7E-09 58.8 11.2 74 86-160 58-140 (174)
124 3es4_A Uncharacterized protein 97.9 2.7E-05 9.2E-10 57.5 6.8 64 81-150 42-105 (116)
125 3myx_A Uncharacterized protein 97.7 0.00018 6.2E-09 59.4 9.3 64 80-149 166-229 (238)
126 1yud_A Hypothetical protein SO 97.7 0.00096 3.3E-08 52.3 12.4 131 59-198 26-164 (170)
127 3gbg_A TCP pilus virulence reg 97.6 0.00023 7.9E-09 58.8 8.8 65 80-148 6-72 (276)
128 2vec_A YHAK, pirin-like protei 97.5 0.00058 2E-08 57.0 9.2 72 83-158 66-139 (256)
129 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 97.3 0.0021 7.3E-08 51.0 11.0 63 89-151 56-128 (185)
130 3bb6_A Uncharacterized protein 97.3 0.0016 5.5E-08 48.6 9.3 62 90-151 23-91 (127)
131 2ixk_A DTDP-4-dehydrorhamnose 97.3 0.0026 8.8E-08 50.5 11.0 63 89-151 57-129 (184)
132 1tq5_A Protein YHHW; bicupin, 97.2 0.0018 6.3E-08 53.4 9.7 73 82-158 42-116 (242)
133 3kmh_A D-lyxose isomerase; cup 97.2 0.0029 1E-07 51.9 10.6 79 80-159 105-206 (246)
134 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 97.2 0.0014 4.9E-08 52.5 8.7 64 87-151 66-135 (197)
135 3o14_A Anti-ecfsigma factor, C 97.2 0.00068 2.3E-08 55.4 6.7 64 82-158 147-210 (223)
136 1wlt_A 176AA long hypothetical 97.2 0.0046 1.6E-07 49.5 11.3 69 88-157 72-151 (196)
137 1vrb_A Putative asparaginyl hy 97.2 0.0022 7.5E-08 55.5 10.2 72 86-159 145-251 (342)
138 3ryk_A DTDP-4-dehydrorhamnose 97.1 0.003 1E-07 50.9 9.8 70 89-159 78-158 (205)
139 1dzr_A DTDP-4-dehydrorhamnose 97.0 0.0071 2.4E-07 47.9 11.0 63 89-151 55-128 (183)
140 4gjz_A Lysine-specific demethy 97.0 0.0014 4.9E-08 52.3 6.5 66 85-151 127-227 (235)
141 1oi6_A PCZA361.16; epimerase, 96.9 0.012 4E-07 47.5 11.1 68 89-157 55-133 (205)
142 2c0z_A NOVW; isomerase, epimer 96.9 0.012 4.1E-07 47.8 11.2 68 89-157 63-141 (216)
143 1upi_A DTDP-4-dehydrorhamnose 96.9 0.017 5.8E-07 47.2 12.1 69 89-158 74-153 (225)
144 4hn1_A Putative 3-epimerase in 96.9 0.021 7.3E-07 45.8 12.4 77 89-166 52-139 (201)
145 3d8c_A Hypoxia-inducible facto 96.6 0.0073 2.5E-07 52.3 8.3 73 86-160 187-296 (349)
146 2xdv_A MYC-induced nuclear ant 96.2 0.018 6.3E-07 51.4 8.9 63 86-149 143-223 (442)
147 3al5_A HTYW5, JMJC domain-cont 96.0 0.016 5.3E-07 49.9 7.3 65 86-151 171-266 (338)
148 2qnk_A 3-hydroxyanthranilate 3 95.9 0.016 5.5E-07 48.7 6.8 56 88-151 214-270 (286)
149 4diq_A Lysine-specific demethy 95.8 0.086 2.9E-06 47.6 11.5 66 85-151 167-254 (489)
150 2qdr_A Uncharacterized protein 95.6 0.039 1.3E-06 45.9 7.6 87 60-163 76-163 (303)
151 2p17_A Pirin-like protein; GK1 95.5 0.074 2.5E-06 44.6 9.4 90 61-157 20-112 (277)
152 1eyb_A Homogentisate 1,2-dioxy 95.3 0.044 1.5E-06 49.0 7.6 62 95-162 171-232 (471)
153 3k2o_A Bifunctional arginine d 95.2 0.062 2.1E-06 46.3 8.1 75 87-162 177-292 (336)
154 3kv5_D JMJC domain-containing 95.2 0.049 1.7E-06 49.3 7.6 64 88-151 273-362 (488)
155 1j1l_A Pirin; beta sandwich, c 95.1 0.12 4E-06 43.7 9.2 89 62-157 21-114 (290)
156 3dl3_A Tellurite resistance pr 95.0 0.12 4E-06 38.0 7.9 47 102-148 38-87 (119)
157 2yu1_A JMJC domain-containing 94.9 0.078 2.7E-06 47.5 8.0 76 88-164 203-304 (451)
158 3k3o_A PHF8, PHD finger protei 94.8 0.067 2.3E-06 46.7 7.2 64 88-151 154-243 (371)
159 3rcq_A Aspartyl/asparaginyl be 94.6 0.069 2.4E-06 42.6 6.3 70 82-157 103-177 (197)
160 3kv4_A PHD finger protein 8; e 94.6 0.12 4E-06 46.3 8.3 63 89-151 239-327 (447)
161 1e5r_A Proline oxidase; oxidor 94.4 0.017 6E-07 48.8 2.5 67 81-151 91-166 (290)
162 3kv9_A JMJC domain-containing 94.2 0.12 4E-06 45.6 7.3 63 89-151 183-271 (397)
163 2qjv_A Uncharacterized IOLB-li 94.1 0.35 1.2E-05 40.3 9.8 83 78-163 150-248 (270)
164 3pua_A GRC5, PHD finger protei 93.9 0.16 5.5E-06 44.6 7.6 64 88-151 181-270 (392)
165 2rg4_A Uncharacterized protein 93.6 0.12 4.2E-06 41.5 6.0 72 82-157 104-201 (216)
166 2oyz_A UPF0345 protein VPA0057 93.1 0.45 1.5E-05 33.4 7.4 57 86-148 28-84 (94)
167 3hqx_A UPF0345 protein aciad03 92.3 0.67 2.3E-05 33.5 7.5 58 87-148 43-100 (111)
168 1pmi_A PMI, phosphomannose iso 92.1 0.48 1.6E-05 42.2 8.1 76 80-160 356-437 (440)
169 3m3i_A Putative uncharacterize 91.9 4.2 0.00014 32.9 13.3 134 59-199 33-210 (225)
170 3pur_A Lysine-specific demethy 91.7 0.45 1.5E-05 43.3 7.5 63 89-151 304-392 (528)
171 1qwr_A Mannose-6-phosphate iso 90.8 0.33 1.1E-05 41.3 5.4 46 101-146 116-179 (319)
172 3loi_A Putative uncharacterize 90.7 4.8 0.00016 31.2 14.6 130 59-199 24-168 (172)
173 1qwr_A Mannose-6-phosphate iso 90.5 0.39 1.3E-05 40.9 5.6 54 80-141 250-303 (319)
174 2wfp_A Mannose-6-phosphate iso 90.5 0.4 1.4E-05 42.1 5.8 55 79-141 322-376 (394)
175 1xru_A 4-deoxy-L-threo-5-hexos 90.5 2.6 8.9E-05 35.3 10.5 82 79-164 178-266 (282)
176 1tq5_A Protein YHHW; bicupin, 90.3 1.4 4.9E-05 35.9 8.7 69 79-159 158-226 (242)
177 1znp_A Hypothetical protein AT 90.2 4.9 0.00017 30.6 12.2 90 59-149 19-115 (154)
178 2ypd_A Probable JMJC domain-co 89.8 0.31 1E-05 42.7 4.4 41 123-164 291-331 (392)
179 3eo6_A Protein of unknown func 89.5 0.69 2.4E-05 33.1 5.3 56 87-148 42-97 (106)
180 2vec_A YHAK, pirin-like protei 88.8 1.9 6.4E-05 35.6 8.4 71 79-157 180-250 (256)
181 1ywk_A 4-deoxy-L-threo-5-hexos 87.7 1.6 5.3E-05 36.7 7.2 82 79-164 178-266 (289)
182 2p17_A Pirin-like protein; GK1 87.5 2.2 7.6E-05 35.4 8.1 72 78-159 164-240 (277)
183 1zx5_A Mannosephosphate isomer 86.7 0.9 3.1E-05 38.3 5.3 54 80-143 229-283 (300)
184 3g7d_A PHPD; non heme Fe(II) d 86.0 7.6 0.00026 33.4 10.5 77 65-146 320-397 (443)
185 2qjv_A Uncharacterized IOLB-li 85.8 4.5 0.00016 33.6 9.0 70 81-159 29-108 (270)
186 1j1l_A Pirin; beta sandwich, c 85.5 3 0.0001 34.9 7.9 77 78-160 166-242 (290)
187 2pqq_A Putative transcriptiona 85.4 1.8 6.2E-05 30.7 5.8 52 83-135 28-80 (149)
188 3gyd_A CNMP-BD protein, cyclic 84.7 3.9 0.00013 30.9 7.8 52 83-135 62-114 (187)
189 3dn7_A Cyclic nucleotide bindi 84.3 3.4 0.00012 31.0 7.2 51 84-136 31-83 (194)
190 2oz6_A Virulence factor regula 84.0 3.5 0.00012 31.1 7.2 52 84-136 14-66 (207)
191 3mdp_A Cyclic nucleotide-bindi 83.7 1.9 6.4E-05 30.4 5.2 52 83-136 29-85 (142)
192 3idb_B CAMP-dependent protein 83.1 4.2 0.00014 29.6 7.1 51 83-135 61-112 (161)
193 3fx3_A Cyclic nucleotide-bindi 82.9 3.7 0.00013 31.9 7.1 52 84-136 35-87 (237)
194 3ryp_A Catabolite gene activat 82.8 4.2 0.00015 30.7 7.2 52 84-136 20-72 (210)
195 4ev0_A Transcription regulator 82.5 3.3 0.00011 31.5 6.5 115 84-202 23-187 (216)
196 1ft9_A Carbon monoxide oxidati 82.4 6.9 0.00024 30.0 8.4 113 83-202 23-187 (222)
197 3e97_A Transcriptional regulat 82.3 4 0.00014 31.5 7.0 53 83-136 29-82 (231)
198 3iwz_A CAP-like, catabolite ac 81.3 4 0.00014 31.4 6.7 52 84-136 35-87 (230)
199 3d0s_A Transcriptional regulat 81.0 4.5 0.00016 31.1 6.9 51 85-136 31-82 (227)
200 3b02_A Transcriptional regulat 80.4 3.7 0.00013 31.0 6.1 49 87-136 3-52 (195)
201 1zyb_A Transcription regulator 80.2 3.6 0.00012 32.0 6.1 116 83-202 43-210 (232)
202 2fmy_A COOA, carbon monoxide o 80.1 8.8 0.0003 29.3 8.3 112 84-202 28-191 (220)
203 1zx5_A Mannosephosphate isomer 79.8 1.3 4.5E-05 37.3 3.5 45 102-146 117-179 (300)
204 3kcc_A Catabolite gene activat 79.6 5.8 0.0002 31.6 7.3 52 84-136 70-122 (260)
205 2z69_A DNR protein; beta barre 79.2 1.6 5.6E-05 31.2 3.5 52 83-135 35-87 (154)
206 3la7_A Global nitrogen regulat 78.4 5.3 0.00018 31.3 6.6 53 83-136 43-96 (243)
207 1o5l_A Transcriptional regulat 77.8 3.9 0.00013 31.4 5.5 52 83-135 22-74 (213)
208 2gau_A Transcriptional regulat 77.2 3.7 0.00013 31.7 5.3 52 83-135 33-85 (232)
209 3e6c_C CPRK, cyclic nucleotide 76.6 6 0.0002 31.1 6.4 116 83-202 32-201 (250)
210 3dv8_A Transcriptional regulat 76.5 5.7 0.00019 30.2 6.1 115 84-202 27-193 (220)
211 2ptm_A Hyperpolarization-activ 76.5 5.2 0.00018 30.2 5.9 49 83-135 94-142 (198)
212 2bgc_A PRFA; bacterial infecti 76.4 6.7 0.00023 30.6 6.6 71 85-159 20-98 (238)
213 4ava_A Lysine acetyltransferas 75.4 5.9 0.0002 32.5 6.3 51 84-135 37-87 (333)
214 2wfp_A Mannose-6-phosphate iso 73.3 2.8 9.6E-05 36.6 3.9 23 124-146 239-261 (394)
215 3bpz_A Potassium/sodium hyperp 72.9 6.6 0.00023 29.8 5.6 48 83-135 95-142 (202)
216 2qcs_B CAMP-dependent protein 72.0 14 0.00048 29.4 7.7 52 83-135 180-233 (291)
217 2zcw_A TTHA1359, transcription 70.1 8.8 0.0003 28.9 5.8 113 85-202 7-170 (202)
218 1ywk_A 4-deoxy-L-threo-5-hexos 67.3 12 0.00041 31.3 6.3 67 86-159 62-132 (289)
219 1pmi_A PMI, phosphomannose iso 66.2 4.1 0.00014 36.1 3.4 22 126-147 267-288 (440)
220 2xxz_A Lysine-specific demethy 65.0 12 0.00041 32.0 6.0 37 123-160 277-313 (332)
221 1xsq_A Ureidoglycolate hydrola 63.8 13 0.00046 28.4 5.5 64 95-159 70-139 (168)
222 1o7f_A CAMP-dependent RAP1 gua 63.6 12 0.00043 32.2 6.0 54 83-137 65-121 (469)
223 4f8a_A Potassium voltage-gated 63.4 23 0.00078 25.1 6.7 49 84-137 51-99 (160)
224 2d93_A RAP guanine nucleotide 62.8 8.3 0.00028 26.9 4.0 47 84-135 40-87 (134)
225 3tnp_B CAMP-dependent protein 62.6 23 0.00077 30.5 7.5 51 83-135 168-219 (416)
226 3ocp_A PRKG1 protein; serine/t 61.9 18 0.00063 25.1 5.8 47 84-135 47-93 (139)
227 2bdr_A Ureidoglycolate hydrola 60.4 20 0.00067 27.7 6.0 64 95-159 72-141 (175)
228 3pna_A CAMP-dependent protein 59.8 26 0.00088 24.9 6.4 48 83-135 61-108 (154)
229 3shr_A CGMP-dependent protein 58.1 18 0.00063 28.9 5.8 52 83-135 180-233 (299)
230 1xru_A 4-deoxy-L-threo-5-hexos 57.6 15 0.00051 30.6 5.1 51 103-159 79-132 (282)
231 2qdr_A Uncharacterized protein 57.2 33 0.0011 28.5 7.0 48 80-144 216-264 (303)
232 3dkw_A DNR protein; CRP-FNR, H 55.4 3.2 0.00011 31.9 0.6 53 84-137 33-86 (227)
233 1vp6_A CNBD, cyclic-nucleotide 54.7 12 0.0004 26.0 3.6 45 84-135 35-79 (138)
234 1s4c_A Protein HI0227; double- 54.5 28 0.00097 25.8 5.9 54 94-147 60-134 (155)
235 3avr_A Lysine-specific demethy 53.4 19 0.00064 32.8 5.4 36 123-159 336-371 (531)
236 1xe7_A YML079WP, hypothetical 52.9 83 0.0028 24.8 13.9 66 82-148 80-152 (203)
237 4ask_A Lysine-specific demethy 52.0 14 0.00049 33.3 4.4 85 70-159 228-346 (510)
238 1yll_A PA5104, conserved hypot 50.7 12 0.00042 29.5 3.4 34 103-140 141-174 (200)
239 3of1_A CAMP-dependent protein 50.6 14 0.00048 28.3 3.8 47 84-135 31-77 (246)
240 3ukn_A Novel protein similar t 50.4 19 0.00064 27.3 4.4 49 83-136 98-146 (212)
241 3of1_A CAMP-dependent protein 47.9 28 0.00095 26.6 5.1 49 83-135 148-196 (246)
242 2qcs_B CAMP-dependent protein 47.9 41 0.0014 26.5 6.3 48 83-135 62-109 (291)
243 4f7z_A RAP guanine nucleotide 41.5 51 0.0017 31.7 6.8 53 82-135 64-119 (999)
244 3tnp_B CAMP-dependent protein 40.3 45 0.0015 28.6 5.7 52 83-135 290-348 (416)
245 2dkz_A Hypothetical protein LO 39.5 18 0.00061 24.6 2.3 32 170-202 45-76 (84)
246 3shr_A CGMP-dependent protein 36.9 36 0.0012 27.1 4.3 49 83-136 62-110 (299)
247 3g7d_A PHPD; non heme Fe(II) d 36.2 1.2E+02 0.0041 26.1 7.4 73 126-199 156-264 (443)
248 4din_B CAMP-dependent protein 35.4 48 0.0017 27.9 5.0 49 86-135 274-324 (381)
249 2qn4_A RASI, alpha-amylase/sub 34.6 11 0.00036 29.9 0.6 29 1-29 1-29 (200)
250 1wy3_A Villin; structural prot 34.3 27 0.00093 19.6 2.2 21 179-199 1-21 (35)
251 1und_A Advillin, P92; actin bi 32.1 31 0.0011 19.6 2.2 22 178-199 2-23 (37)
252 1wgp_A Probable cyclic nucleot 31.4 7.8 0.00027 27.0 -0.6 34 101-135 46-82 (137)
253 1o7f_A CAMP-dependent RAP1 gua 31.1 1.3E+02 0.0043 25.6 7.1 46 86-135 364-409 (469)
254 2opw_A Phyhd1 protein; double- 27.8 47 0.0016 26.7 3.5 29 123-151 226-255 (291)
255 2a1x_A Phytanoyl-COA dioxygena 27.4 67 0.0023 26.0 4.5 29 123-151 214-243 (308)
256 4din_B CAMP-dependent protein 26.0 42 0.0014 28.3 3.0 48 83-135 153-200 (381)
257 3nnf_A CURA; non-HAEM Fe(II)/a 25.6 66 0.0023 27.3 4.0 22 125-146 234-255 (344)
258 1tc3_C Protein (TC3 transposas 25.3 77 0.0026 17.2 3.3 28 176-203 19-46 (51)
259 2fct_A Syringomycin biosynthes 24.5 74 0.0025 25.8 4.2 26 123-148 218-244 (313)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=100.00 E-value=1.2e-42 Score=283.33 Aligned_cols=184 Identities=33% Similarity=0.585 Sum_probs=171.1
Q ss_pred cCCCCCCceeccCCCC-----------CCCcCCCCceEec-cccccCCCCCCceEEEEeeccccCCCCCCeEEEEEEEec
Q 041665 22 SDPDILTDFVIPANSS-----------NDAIDGNFFTFTG-MRSIIEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFP 89 (206)
Q Consensus 22 ~d~~~~~d~cva~~~~-----------p~~~~~~dF~~~~-~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~ 89 (206)
+||||||||||||.+. |+.++++||+|++ +.+++++.+..|+.++.++..++|++++.++++.+++++
T Consensus 1 ~~~~~~~d~c~~~~~~~~~~~~g~~c~~~~~~~~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~~l~ 80 (201)
T 1fi2_A 1 TDPDPLQDFCVADLDGKAVSVNGHTCKPMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFA 80 (201)
T ss_dssp CCCCCSSSCCCBCCCTTSCCCSSCCBCCGGGCCSCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEEEEEC
T ss_pred CCCcccceeEEecCCCCcccccCcccccCcccccceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEEEEEC
Confidence 6999999999997532 7899999999998 988888778899999999999999999999999999999
Q ss_pred CCCcCCCccCCCCcEEEEEEeeEEEEEEEeCC---CcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecCCCcc
Q 041665 90 AGAINPPHTHPRSAELLFVVSGILEVGFIDTT---NKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGSASAG 166 (206)
Q Consensus 90 pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~---~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg 166 (206)
||+..++|||++++|++||++|++++++.+.+ ++.+++.|++||+++||+|.+|+++|.+++ ++++++++++++|+
T Consensus 81 pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~-~~~~l~v~~~~~p~ 159 (201)
T 1fi2_A 81 PGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKT-EAYMVVSFNSQNPG 159 (201)
T ss_dssp TTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSS-CEEEEEEESSSCCC
T ss_pred CCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCC-CEEEEEEECCCCCC
Confidence 99999999999889999999999999998654 666789999999999999999999999999 99999999999999
Q ss_pred eeeechhhhcC--CCCHHHHHHHcCCCHHHHHHHHhhcCCCC
Q 041665 167 TVSVPTTVFAT--GIDENILAKAFKTDVTTIQKIKAGLAAKA 206 (206)
Q Consensus 167 ~~~~~~~~f~~--~~p~~vla~~f~~~~~~v~~l~~~~~~~~ 206 (206)
.+.++.++|++ .+|+++|+++|+++.+++++||++|++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~~~~~ 201 (201)
T 1fi2_A 160 IVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGGS 201 (201)
T ss_dssp CEEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHSTTCC
T ss_pred eEehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhhcCCC
Confidence 99999999986 39999999999999999999999998874
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.96 E-value=1.2e-29 Score=228.75 Aligned_cols=143 Identities=15% Similarity=0.279 Sum_probs=133.7
Q ss_pred CCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCC-cEEEEEEcCCCE
Q 041665 56 EGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTN-KLYTQTLQIGDM 134 (206)
Q Consensus 56 ~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~-~~~~~~L~~GD~ 134 (206)
++.++.||+++.+++.+||+|++++++++++++.||++.+||||++++|++||++|++++++++.+| +++..+|++||+
T Consensus 298 d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV 377 (466)
T 3kgl_A 298 DVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQL 377 (466)
T ss_dssp EEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCE
T ss_pred CcccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcE
Confidence 4457789999999999999999999999999999999999999999999999999999999999876 678899999999
Q ss_pred EEECCCCeEEEEeCCCCccEEEEEEecCCCcceeeec--hhhhcCCCCHHHHHHHcCCCHHHHHHHHhh
Q 041665 135 FVFPKGLVHYQYNSKANQPAAAISAFGSASAGTVSVP--TTVFATGIDENILAKAFKTDVTTIQKIKAG 201 (206)
Q Consensus 135 ~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg~~~~~--~~~f~~~~p~~vla~~f~~~~~~v~~l~~~ 201 (206)
++||+|.+|++ |.+++ ++++++++++++|+.+.++ .++|+ .+|++||+++|+++.+++++|+++
T Consensus 378 ~v~P~G~~H~~-~ag~e-~~~~l~~f~s~np~~~~LaG~~s~~~-~lP~eVla~aF~v~~~~v~~Lk~~ 443 (466)
T 3kgl_A 378 LSIPQGFSVVK-RATSE-QFRWIEFKTNANAQINTLAGRTSVLR-GLPLEVISNGYQISLEEARRVKFN 443 (466)
T ss_dssp EEECTTCEEEE-EECSS-EEEEEEEESSSSCCEEESSSTTCTGG-GSCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEECCCCeEEE-EcCCC-CEEEEEEECCCCCccccccchhhhhh-hCCHHHHHHHhCcCHHHHHHHHhc
Confidence 99999999998 77888 8999999999999999997 57787 599999999999999999999986
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.96 E-value=4.4e-29 Score=226.61 Aligned_cols=157 Identities=12% Similarity=0.205 Sum_probs=138.4
Q ss_pred CCCCceEeccc-cccCCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeC
Q 041665 42 DGNFFTFTGMR-SIIEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDT 120 (206)
Q Consensus 42 ~~~dF~~~~~~-~~~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~ 120 (206)
.+..+.++... ...++.++.||+++.+++.+||+|+++++++++++|.||++.+|||||+++|++||++|++++++++.
T Consensus 318 c~~~l~~Ni~~p~~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~ 397 (496)
T 3ksc_A 318 CTAKLRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNC 397 (496)
T ss_dssp SSSCCEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECT
T ss_pred cchhhhccccccccCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeC
Confidence 34445555542 22344577899999999999999999999999999999999999999999999999999999999998
Q ss_pred CC-cEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecCCCcceeeec--hhhhcCCCCHHHHHHHcCCCHHHHHH
Q 041665 121 TN-KLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGSASAGTVSVP--TTVFATGIDENILAKAFKTDVTTIQK 197 (206)
Q Consensus 121 ~~-~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg~~~~~--~~~f~~~~p~~vla~~f~~~~~~v~~ 197 (206)
+| +++..+|++||+++||+|.+|++.|. ++ .+.+++++++++|+.+.++ .++|+ .+|++||+++|+++.+++++
T Consensus 398 ~g~~~f~~~l~~GDV~v~P~G~~H~~~a~-~e-~~~~l~f~~s~np~~~~LaG~~sv~~-~~p~eVLa~aF~v~~~~v~~ 474 (496)
T 3ksc_A 398 NGNTVFDGELEAGRALTVPQNYAVAAKSL-SD-RFSYVAFKTNDRAGIARLAGTSSVIN-NLPLDVVAATFNLQRNEARQ 474 (496)
T ss_dssp TSCEEEEEEEETTCEEEECTTCEEEEEEC-SS-EEEEEEEESSTTCCEEESSSTTCTTT-TSCHHHHHHHHTCCHHHHHH
T ss_pred CCcEEEEEEecCCeEEEECCCCEEEEEeC-CC-CEEEEEEECCCCCccccccchhhhhh-hCCHHHHHHHHCcCHHHHHH
Confidence 75 56788999999999999999998775 67 8999999999999999887 56786 69999999999999999999
Q ss_pred HHhh
Q 041665 198 IKAG 201 (206)
Q Consensus 198 l~~~ 201 (206)
|+++
T Consensus 475 Lk~~ 478 (496)
T 3ksc_A 475 LKSN 478 (496)
T ss_dssp HHHS
T ss_pred HHhc
Confidence 9985
No 4
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.96 E-value=7.7e-29 Score=223.50 Aligned_cols=146 Identities=14% Similarity=0.200 Sum_probs=134.6
Q ss_pred ccCCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCC-cEEEEEEcCC
Q 041665 54 IIEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTN-KLYTQTLQIG 132 (206)
Q Consensus 54 ~~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~-~~~~~~L~~G 132 (206)
..++.++.||+++.+++.+||+|++++++++++++.||++.+|||||+++|++||++|++++++++.+| +.+..+|++|
T Consensus 296 ~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~G 375 (465)
T 3qac_A 296 KADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRG 375 (465)
T ss_dssp TCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETT
T ss_pred cCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCC
Confidence 345567789999999999999999999999999999999999999999999999999999999999875 6788999999
Q ss_pred CEEEECCCCeEEEEeCCCCccEEEEEEecCCCcceeeec--hhhhcCCCCHHHHHHHcCCCHHHHHHHHhhc
Q 041665 133 DMFVFPKGLVHYQYNSKANQPAAAISAFGSASAGTVSVP--TTVFATGIDENILAKAFKTDVTTIQKIKAGL 202 (206)
Q Consensus 133 D~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg~~~~~--~~~f~~~~p~~vla~~f~~~~~~v~~l~~~~ 202 (206)
|+++||+|.+|++. .+++ ++.+++++++++|+.+.++ .++|+ .+|++||+++|+++.+++++||++-
T Consensus 376 DVfvvP~g~~h~~~-ag~e-~~~~l~f~~s~np~~~~LaG~~sv~~-~ip~eVla~aF~v~~e~v~~Lk~~~ 444 (465)
T 3qac_A 376 QLVVVPQNFAIVKQ-AFED-GFEWVSFKTSENAMFQSLAGRTSAIR-SLPIDVVSNIYQISREEAFGLKFNR 444 (465)
T ss_dssp CEEEECTTCEEEEE-EEEE-EEEEEEEESSTTCCEEESSSSSBHHH-HSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred eEEEECCCcEEEEE-cCCC-CeEEEEEecCCCCcccccccchhhhh-hCCHHHHHHHhCCCHHHHHHHHhcc
Confidence 99999999999986 5777 8999999999999999987 67786 5999999999999999999999864
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.96 E-value=1.3e-28 Score=222.38 Aligned_cols=145 Identities=17% Similarity=0.222 Sum_probs=134.3
Q ss_pred cCCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCC-cEEEEEEcCCC
Q 041665 55 IEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTN-KLYTQTLQIGD 133 (206)
Q Consensus 55 ~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~-~~~~~~L~~GD 133 (206)
.++.++.||+++.+++.+||+|++++++++++++.||++.+||||+++.|++||++|++++++++.+| +.+..+|++||
T Consensus 296 ~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GD 375 (459)
T 2e9q_A 296 ADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQ 375 (459)
T ss_dssp CSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTC
T ss_pred CCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCc
Confidence 34457789999999999999999999999999999999999999999999999999999999999775 56677899999
Q ss_pred EEEECCCCeEEEEeCCCCccEEEEEEecCCCcceeeec--hhhhcCCCCHHHHHHHcCCCHHHHHHHHhhc
Q 041665 134 MFVFPKGLVHYQYNSKANQPAAAISAFGSASAGTVSVP--TTVFATGIDENILAKAFKTDVTTIQKIKAGL 202 (206)
Q Consensus 134 ~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg~~~~~--~~~f~~~~p~~vla~~f~~~~~~v~~l~~~~ 202 (206)
+++||+|.+|++.| +++ ++.+++++++++|+.+.++ .++|+ .+|++||+++|+++.+++++|+++.
T Consensus 376 v~v~P~G~~H~~~n-g~~-~~~~l~~~~s~~~~~~~laG~~s~~~-~~p~~Vla~af~v~~~~v~~l~~~~ 443 (459)
T 2e9q_A 376 VLMIPQNFVVIKRA-SDR-GFEWIAFKTNDNAITNLLAGRVSQMR-MLPLGVLSNMYRISREEAQRLKYGQ 443 (459)
T ss_dssp EEEECTTCEEEEEE-EEE-EEEEEEEESSSSCCEEESSSSSSHHH-HSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred EEEECCCCEEEEEe-CCC-CeEEEEEecCCCCcceeecchhHHHH-hCCHHHHHHHHCcCHHHHHHHHhcC
Confidence 99999999999999 778 8999999999999999998 77887 5999999999999999999999874
No 6
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.96 E-value=1.3e-28 Score=223.86 Aligned_cols=156 Identities=16% Similarity=0.179 Sum_probs=134.5
Q ss_pred CCceEeccc-cccCCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCC
Q 041665 44 NFFTFTGMR-SIIEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTN 122 (206)
Q Consensus 44 ~dF~~~~~~-~~~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~ 122 (206)
..+.|+... ...++.++.||+++.+++.+||+|+++++++++++|.||++.+||||++++|++||++|++++++++++|
T Consensus 356 ~rl~~Ni~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G 435 (531)
T 3fz3_A 356 LRLKENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENG 435 (531)
T ss_dssp CCCEEECCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS
T ss_pred ceeeeccCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCC
Confidence 344666542 3345668889999999999999999999999999999999999999999999999999999999999876
Q ss_pred -cEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecCCCcceeeec--hhhhcCCCCHHHHHHHcCCCHHHHHHHH
Q 041665 123 -KLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGSASAGTVSVP--TTVFATGIDENILAKAFKTDVTTIQKIK 199 (206)
Q Consensus 123 -~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg~~~~~--~~~f~~~~p~~vla~~f~~~~~~v~~l~ 199 (206)
+++..+|++||+++||+|.+|+.. .+++ .+.+++..++++|+...++ .++|+ .+|++||+++|+++.+++++||
T Consensus 436 ~~v~~~~L~~GDV~v~P~G~~H~~~-ag~e-~l~flaF~ss~np~~~~LaG~~svf~-~lP~eVLa~aF~v~~e~v~kLk 512 (531)
T 3fz3_A 436 DAILDQEVQQGQLFIVPQNHGVIQQ-AGNQ-GFEYFAFKTEENAFINTLAGRTSFLR-ALPDEVLANAYQISREQARQLK 512 (531)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEE-EEEE-EEEEEEEESSTTCCEEESSSTTCHHH-HSCHHHHHHHHTCCHHHHHHHH
T ss_pred cEEEEEEecCCeEEEECCCCeEEEe-cCCC-CEEEEEEecCCCCcceeccchhHHHH-hCCHHHHHHHhCcCHHHHHHHH
Confidence 568999999999999999999776 4555 5556544456899999898 77887 4999999999999999999999
Q ss_pred hhc
Q 041665 200 AGL 202 (206)
Q Consensus 200 ~~~ 202 (206)
++-
T Consensus 513 ~~~ 515 (531)
T 3fz3_A 513 YNR 515 (531)
T ss_dssp HSC
T ss_pred hcC
Confidence 874
No 7
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.95 E-value=2.9e-27 Score=214.55 Aligned_cols=146 Identities=15% Similarity=0.279 Sum_probs=133.8
Q ss_pred cCCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCC-cEEEEEEcCCC
Q 041665 55 IEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTN-KLYTQTLQIGD 133 (206)
Q Consensus 55 ~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~-~~~~~~L~~GD 133 (206)
.++.++.||+++.+++.+||++++++++++++++.||++.++|||+++.|++||++|++++++++++| +.+..+|++||
T Consensus 312 ~~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GD 391 (476)
T 1fxz_A 312 PDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGR 391 (476)
T ss_dssp CSEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTC
T ss_pred CCcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCC
Confidence 34557889999999999999999999999999999999999999999999999999999999998775 55677899999
Q ss_pred EEEECCCCeEEEEeCCCCccEEEEEEecCCCcceeeec--hhhhcCCCCHHHHHHHcCCCHHHHHHHHhhcC
Q 041665 134 MFVFPKGLVHYQYNSKANQPAAAISAFGSASAGTVSVP--TTVFATGIDENILAKAFKTDVTTIQKIKAGLA 203 (206)
Q Consensus 134 ~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg~~~~~--~~~f~~~~p~~vla~~f~~~~~~v~~l~~~~~ 203 (206)
+++||+|.+|++.| +++ .+.+++++++++|+.+.++ .++|+ .+|++||+++|+++.+++++|++++.
T Consensus 392 v~viP~G~~H~~~n-g~~-~l~~l~f~~s~~p~~~~laG~~s~~~-~~p~~Vla~af~~~~~~v~~l~~~~~ 460 (476)
T 1fxz_A 392 VLIVPQNFVVAARS-QSD-NFEYVSFKTNDTPMIGTLAGANSLLN-ALPEEVIQHTFNLKSQQARQIKNNNP 460 (476)
T ss_dssp EEEECTTCEEEEEE-CST-TEEEEEEESSSSCCEEESSSTTCTGG-GSCHHHHHHHHTCCHHHHHHHHHSCC
T ss_pred EEEECCCCeEEEEe-CCC-CEEEEEEECCCCCceeEccchhHHHH-hCCHHHHHHHhCcCHHHHHHHHhhCC
Confidence 99999999999999 777 8888888878899999997 78887 49999999999999999999998753
No 8
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.95 E-value=2e-27 Score=216.45 Aligned_cols=146 Identities=14% Similarity=0.242 Sum_probs=133.8
Q ss_pred cCCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCC-cEEEEEEcCCC
Q 041665 55 IEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTN-KLYTQTLQIGD 133 (206)
Q Consensus 55 ~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~-~~~~~~L~~GD 133 (206)
+++.++.|++++.+++.+||++++++++++++++.||++.++|||++++|++||++|++++++++.+| +.+..+|++||
T Consensus 346 ~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GD 425 (510)
T 3c3v_A 346 PDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGH 425 (510)
T ss_dssp CSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTC
T ss_pred CCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCc
Confidence 34557889999999999999999999999999999999999999999999999999999999998875 56677899999
Q ss_pred EEEECCCCeEEEEeCCCCccEEEEEEecCCCcceeeec--hhhhcCCCCHHHHHHHcCCCHHHHHHHHhhcC
Q 041665 134 MFVFPKGLVHYQYNSKANQPAAAISAFGSASAGTVSVP--TTVFATGIDENILAKAFKTDVTTIQKIKAGLA 203 (206)
Q Consensus 134 ~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg~~~~~--~~~f~~~~p~~vla~~f~~~~~~v~~l~~~~~ 203 (206)
+++||+|.+|++.| +++ .+.+++++++.+|+.+.++ .++|+ .+|++||+++|+++.+++++|++++.
T Consensus 426 v~viP~G~~H~~~N-g~e-~l~~l~f~~s~~p~~~~LaG~~svf~-~lp~eVla~aF~v~~e~v~~L~~~~~ 494 (510)
T 3c3v_A 426 VLVVPQNFAVAGKS-QSD-NFEYVAFKTDSRPSIANLAGENSVID-NLPEEVVANSYGLPREQARQLKNNNP 494 (510)
T ss_dssp EEEECTTCEEEEEE-CSS-EEEEEEEESSSSCCEEESSSTTSTTT-TSCHHHHHHHHTCCHHHHHHHHHSCC
T ss_pred EEEECCCCeEEEEe-CCC-CEEEEEEECCCCcceeecccHhHHHH-hCCHHHHHHHHCcCHHHHHHHHhhCC
Confidence 99999999999999 777 7888888878899999998 78887 59999999999999999999998763
No 9
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.95 E-value=2.7e-27 Score=215.49 Aligned_cols=154 Identities=17% Similarity=0.251 Sum_probs=137.1
Q ss_pred ceEeccc-cccCCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCC-c
Q 041665 46 FTFTGMR-SIIEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTN-K 123 (206)
Q Consensus 46 F~~~~~~-~~~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~-~ 123 (206)
+.++... ..+++.++.|++++.+++.+||++++++++++++++.||++.+||||++++|++||++|++++++++.+| +
T Consensus 331 l~~ni~~~~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~ 410 (493)
T 2d5f_A 331 LHENIARPSRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNA 410 (493)
T ss_dssp CEEECCCGGGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCE
T ss_pred eeecccccCCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCE
Confidence 4444432 4456667899999999999999999999999999999999999999999999999999999999998765 5
Q ss_pred EEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecCCCcceeeechhhhcCCCCHHHHHHHcCCCHHHHHHHHhhcC
Q 041665 124 LYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGSASAGTVSVPTTVFATGIDENILAKAFKTDVTTIQKIKAGLA 203 (206)
Q Consensus 124 ~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg~~~~~~~~f~~~~p~~vla~~f~~~~~~v~~l~~~~~ 203 (206)
.+..+|++||+++||+|.+|++.|. ++ ++.+++++++++|+.+.+ .++|++ +|++||+++|+++.+++++|+++..
T Consensus 411 ~~~~~l~~GDv~vvP~G~~H~~~n~-~e-~~~~l~~~ts~~p~~~~l-~s~~~~-~p~eVla~aF~v~~~~v~~l~~~~~ 486 (493)
T 2d5f_A 411 VFDGELRRGQLLVVPQNFVVAEQGG-EQ-GLEYVVFKTHHNAVSSYI-KDVFRA-IPSEVLSNSYNLGQSQVRQLKYQGN 486 (493)
T ss_dssp EEEEEEETTCEEEECTTCEEEEEEE-EE-EEEEEEEESSTTCCEEEH-HHHHHH-SCHHHHHHHHTCCHHHHHHHHHSSC
T ss_pred EEeEEEcCCCEEEECCCCeEeeeeC-CC-CEEEEEEECCCCCcceeH-HHHHHh-CCHHHHHHHHCcCHHHHHHHHhcCC
Confidence 5667899999999999999999984 57 899999999999999999 778874 9999999999999999999998753
No 10
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.94 E-value=1.1e-26 Score=208.02 Aligned_cols=157 Identities=13% Similarity=0.144 Sum_probs=137.1
Q ss_pred cCCCCceEeccccccCCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeC
Q 041665 41 IDGNFFTFTGMRSIIEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDT 120 (206)
Q Consensus 41 ~~~~dF~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~ 120 (206)
.....+.|+.....+.. +..+|+++.+++.+||+|++++++++++++.||++.+||||+++.|++||++|+++++++++
T Consensus 210 ~~~~~~~~~l~~~~p~~-~~~~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~ 288 (416)
T 1uij_A 210 ISSEDEPFNLRSRNPIY-SNNFGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGI 288 (416)
T ss_dssp GGCSSSCEETTSSCCSE-ECSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEE
T ss_pred CCCcccceeccccCCCc-cCCCceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcC
Confidence 34567888877655433 45567899999999999999999999999999999999999999999999999999999988
Q ss_pred CC--------------cEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecC-CCcceeeec---hhhhcCCCCHH
Q 041665 121 TN--------------KLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGS-ASAGTVSVP---TTVFATGIDEN 182 (206)
Q Consensus 121 ~~--------------~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s-~~pg~~~~~---~~~f~~~~p~~ 182 (206)
+| +.+...|++||+++||+|.+|++.|. + ++.+++++++ ++|+.+.++ .++|+ .+|++
T Consensus 289 ~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~-~~~~l~f~~~~~~~~~~~laG~~~sv~~-~~p~~ 364 (416)
T 1uij_A 289 KEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--S-NLNFLAFGINAENNQRNFLAGEKDNVVR-QIERQ 364 (416)
T ss_dssp C------------CCEEEEEEEEETTCEEEECTTCCEEEEES--S-SEEEEEEEETCTTCCEEESSSSTTBSGG-GSCHH
T ss_pred CCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--C-CeEEEEEEcCCCCCcceecccchhhHHH-hCCHH
Confidence 66 36677999999999999999999998 5 7888888855 499999887 67786 59999
Q ss_pred HHHHHcCCCHHHHHHHHhhc
Q 041665 183 ILAKAFKTDVTTIQKIKAGL 202 (206)
Q Consensus 183 vla~~f~~~~~~v~~l~~~~ 202 (206)
+++++|+++.+++++|+++.
T Consensus 365 vla~af~~~~~~v~~l~~~~ 384 (416)
T 1uij_A 365 VQELAFPGSAQDVERLLKKQ 384 (416)
T ss_dssp HHHHHSSSCHHHHHHHTTSC
T ss_pred HHHHHHCcCHHHHHHHHhcC
Confidence 99999999999999999864
No 11
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.94 E-value=1.3e-26 Score=208.94 Aligned_cols=158 Identities=15% Similarity=0.150 Sum_probs=134.2
Q ss_pred cCCCCceEeccccccCCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeC
Q 041665 41 IDGNFFTFTGMRSIIEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDT 120 (206)
Q Consensus 41 ~~~~dF~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~ 120 (206)
.....|+|+....++.. ++.+|+++.+++.+||+|+++++++.++++.||++.+|||||+++|++||++|++++++++.
T Consensus 242 ~~~~~~~~~l~~~~p~~-~~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~ 320 (445)
T 2cav_A 242 LSSQDKPFNLRSRDPIY-SNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGL 320 (445)
T ss_dssp ----CCCEETTSSCCSE-ESSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC
T ss_pred CCCcccceeccccCCCc-cCCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeC
Confidence 34456788887665443 56788999999999999999999999999999999999999999999999999999999988
Q ss_pred CC---------c--EEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEe-cCCCcceeeec---hhhhcCCCCHHHHH
Q 041665 121 TN---------K--LYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAF-GSASAGTVSVP---TTVFATGIDENILA 185 (206)
Q Consensus 121 ~~---------~--~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~-~s~~pg~~~~~---~~~f~~~~p~~vla 185 (206)
++ + .+..+|++||+++||+|.+|++.|. + +..+++.. ++++|+.+.++ .++|+ .+|+++++
T Consensus 321 ~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~-~~~~v~f~~~~~~~~~~~laG~~~sv~~-~~p~~vla 396 (445)
T 2cav_A 321 EQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--S-DLNMVGIGVNAENNERNFLAGHKENVIR-QIPRQVSD 396 (445)
T ss_dssp -----------CCEEEEEEECTTCEEEECTTCCEEEEES--S-SEEEEEEEESCTTCCEEESSSSTTBSGG-GSCHHHHH
T ss_pred CCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--C-CeEEEEEEccCCCCCcEEcccchhhhhh-hCCHHHHH
Confidence 63 3 5899999999999999999999998 5 56666654 55689999888 67887 59999999
Q ss_pred HHcCCCHHHHHHHHhhcC
Q 041665 186 KAFKTDVTTIQKIKAGLA 203 (206)
Q Consensus 186 ~~f~~~~~~v~~l~~~~~ 203 (206)
++|++|.+++++|++...
T Consensus 397 ~af~v~~~~v~~l~~~~~ 414 (445)
T 2cav_A 397 LTFPGSGEEVEELLENQK 414 (445)
T ss_dssp HHSSSCHHHHHHHHHHCC
T ss_pred HHHCcCHHHHHHHHhcCC
Confidence 999999999999998653
No 12
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.93 E-value=3.4e-26 Score=205.68 Aligned_cols=159 Identities=14% Similarity=0.163 Sum_probs=137.0
Q ss_pred CCcCCCCceEeccccccCCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEE
Q 041665 39 DAIDGNFFTFTGMRSIIEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFI 118 (206)
Q Consensus 39 ~~~~~~dF~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~ 118 (206)
.......+.|+....++.. +..||+++.+++.+||+|++++++++++++.||++.+||||+++.|++||++|+++++++
T Consensus 225 ~g~~~~~~~~~l~~~~p~~-~~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv 303 (434)
T 2ea7_A 225 KELSSQDEPFNLRNSKPIY-SNKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELV 303 (434)
T ss_dssp SCTTCSSSCEETTSSCCSE-EETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEE
T ss_pred CCCCCcccceeeccCCCce-eCCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEE
Confidence 3444567788877655443 466889999999999999999999999999999999999999999999999999999999
Q ss_pred eCCC-------------cEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEe-cCCCcceeeec---hhhhcCCCCH
Q 041665 119 DTTN-------------KLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAF-GSASAGTVSVP---TTVFATGIDE 181 (206)
Q Consensus 119 ~~~~-------------~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~-~s~~pg~~~~~---~~~f~~~~p~ 181 (206)
+++| +.+...|++||+++||+|.+|++.|. + ++.+++++ ++++|+.+.++ .++|+ .+|+
T Consensus 304 ~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~-~~~~v~f~~~~~~~~~~~laG~~~sv~~-~~p~ 379 (434)
T 2ea7_A 304 GLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--S-NLNFFAFGINAENNRRNFLAGGKDNVMS-EIPT 379 (434)
T ss_dssp EEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--S-SEEEEEEEETCTTCCEEESSSSTTBGGG-GSCH
T ss_pred ecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--C-CeEEEEEECCCCCCCceecccchhhhhh-hCCH
Confidence 8754 25667999999999999999999998 5 67777766 44589999888 57786 5999
Q ss_pred HHHHHHcCCCHHHHHHHHhhc
Q 041665 182 NILAKAFKTDVTTIQKIKAGL 202 (206)
Q Consensus 182 ~vla~~f~~~~~~v~~l~~~~ 202 (206)
++|+++|+++.+++++|++..
T Consensus 380 ~vla~af~v~~~~v~~l~~~~ 400 (434)
T 2ea7_A 380 EVLEVSFPASGKKVEKLIKKQ 400 (434)
T ss_dssp HHHHHHSSSCHHHHHHHHTTC
T ss_pred HHHHHHHCcCHHHHHHHHhcC
Confidence 999999999999999999864
No 13
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.93 E-value=1.4e-25 Score=179.41 Aligned_cols=151 Identities=16% Similarity=0.187 Sum_probs=122.3
Q ss_pred CceEeccccccCCCCCCceEEEEeec-----cccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEe
Q 041665 45 FFTFTGMRSIIEGDDPPIFRVSKASM-----AEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFID 119 (206)
Q Consensus 45 dF~~~~~~~~~~~~~~~g~~v~~~~~-----~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~ 119 (206)
.|+|+..... ......||+++.++. ..+|++++ +++.+++++||+..++| |++++|++||++|++++++.+
T Consensus 3 p~~f~~~~~~-~~~~~~~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~ 78 (178)
T 1dgw_A 3 PYLFRSNKFL-TLFKNQHGSLRLLQRFNEDTEKLENLRD--YRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVN 78 (178)
T ss_dssp TTEECGGGEE-EEEEETTEEEEEECCTTSSCGGGGGGTT--EEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEE
T ss_pred Cceechhhcc-cceEcCCCEEEEEcccCCcchhcCCcCc--EEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEe
Confidence 4677765433 222457999999888 67888764 79999999999999999 888999999999999999986
Q ss_pred CCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEe-cCCCcceee---ec-----hhhhcCCCCHHHHHHHcCC
Q 041665 120 TTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAF-GSASAGTVS---VP-----TTVFATGIDENILAKAFKT 190 (206)
Q Consensus 120 ~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~-~s~~pg~~~---~~-----~~~f~~~~p~~vla~~f~~ 190 (206)
+++. .++.|++||+++||+|.+|+++|.|++++++++++. ++++||.+. ++ .++|+ ++|++||+++|++
T Consensus 79 ~~~~-~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~-~~p~~vla~af~v 156 (178)
T 1dgw_A 79 PDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS-AFSKNFLEASYDS 156 (178)
T ss_dssp TTEE-EEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG-GSCHHHHHHHHTS
T ss_pred CCCc-EEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhh-hCCHHHHHHHHCc
Confidence 6442 388999999999999999999999875256766664 566888433 22 46776 6999999999999
Q ss_pred CHHHHHHHHhh
Q 041665 191 DVTTIQKIKAG 201 (206)
Q Consensus 191 ~~~~v~~l~~~ 201 (206)
+.+++++|+.+
T Consensus 157 ~~~~~~~l~~~ 167 (178)
T 1dgw_A 157 PYDEIEQTLLQ 167 (178)
T ss_dssp CHHHHHHHTTS
T ss_pred CHHHHHHHhcC
Confidence 99999999943
No 14
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.92 E-value=4.7e-25 Score=197.17 Aligned_cols=154 Identities=14% Similarity=0.161 Sum_probs=131.9
Q ss_pred CCceEeccccccCCCCCCceEEEEeecccc-CCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCC
Q 041665 44 NFFTFTGMRSIIEGDDPPIFRVSKASMAEF-PALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTN 122 (206)
Q Consensus 44 ~dF~~~~~~~~~~~~~~~g~~v~~~~~~~~-P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~ 122 (206)
..+.|+.....+... ..+|+++.+++.+| |+|++.+++++++++.||++.+||||+++.|++||++|++++++.+.++
T Consensus 226 ~~~~~nl~~~~p~~~-n~~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~ 304 (418)
T 3s7i_A 226 ITNPINLREGEPDLS-NNFGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRK 304 (418)
T ss_dssp CCCCEETTCSCCSEE-ETTEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEE
T ss_pred CCcccccccCCCcee-CCCCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCC
Confidence 367888876665543 45678899999999 9999999999999999999999999999999999999999999997644
Q ss_pred -------------------------cEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEe-cCCCcceeeech---h
Q 041665 123 -------------------------KLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAF-GSASAGTVSVPT---T 173 (206)
Q Consensus 123 -------------------------~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~-~s~~pg~~~~~~---~ 173 (206)
+.+...|++||+++||+|.+|++.|. + ++.+++.. ++++|+.+.++. +
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~--~-~l~~v~f~~~~~~~~~~~LAG~~~s 381 (418)
T 3s7i_A 305 EQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINAS--S-ELHLLGFGINAENNHRIFLAGDKDN 381 (418)
T ss_dssp C-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEES--S-CEEEEEEEESCTTCCEEESSSSTTB
T ss_pred ccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECC--C-CEEEEEEEcCCCCCcceEccCchhh
Confidence 45689999999999999999999884 4 55555433 566899999885 5
Q ss_pred hhcCCCCHHHHHHHcCCCHHHHHHHHhhc
Q 041665 174 VFATGIDENILAKAFKTDVTTIQKIKAGL 202 (206)
Q Consensus 174 ~f~~~~p~~vla~~f~~~~~~v~~l~~~~ 202 (206)
+|. .+|+++|+++|+++.+++++|++.-
T Consensus 382 v~~-~~~~evla~af~v~~~~v~~L~~~q 409 (418)
T 3s7i_A 382 VID-QIEKQAKDLAFPGSGEQVEKLIKNQ 409 (418)
T ss_dssp HHH-HSCHHHHHHHSSSCHHHHHHHHHTC
T ss_pred hhh-cCCHHHHHHHhCCCHHHHHHHHhcC
Confidence 776 6999999999999999999999863
No 15
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.91 E-value=1.7e-23 Score=182.99 Aligned_cols=161 Identities=21% Similarity=0.249 Sum_probs=139.8
Q ss_pred CCCcCCCCceEeccccccCCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEE
Q 041665 38 NDAIDGNFFTFTGMRSIIEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGF 117 (206)
Q Consensus 38 p~~~~~~dF~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~ 117 (206)
+.....++|+|+.+..++ ..+..|+.++.+....+|++++ +.+.+++++||+..++|||+++.|++||++|++++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~-~~~~~gg~~~~~~~~~~~~~~~--~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v 270 (361)
T 2vqa_A 194 QTAKIEVPHTHNLLGQQP-LVSLGGNELRLASAKEFPGSFN--MTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTV 270 (361)
T ss_dssp CCCBCCSCCEEECTTSCC-SEEETTEEEEEECTTTCTTSTT--CEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEE
T ss_pred cCCCCCcceEeccccCCC-cccCCCceEEEEehhhCcCccc--ceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEE
Confidence 445678899998876553 3356789999999999998765 5788999999999999999988999999999999999
Q ss_pred EeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecCCCcceeeechhhhcCCCCHHHHHHHcCCCHHHHHH
Q 041665 118 IDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGSASAGTVSVPTTVFATGIDENILAKAFKTDVTTIQK 197 (206)
Q Consensus 118 ~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg~~~~~~~~f~~~~p~~vla~~f~~~~~~v~~ 197 (206)
.+.+|+.+.+.|++||++++|+|.+|++.|.+++ ++++++++++.+++...++.+ ++ .+|+++|+++|+++++++++
T Consensus 271 ~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~-~~~~l~~~~~~~~~~~~~~~~-~~-~~~~~vl~~~f~~~~~~~~~ 347 (361)
T 2vqa_A 271 FASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQK-PLDIVVVFNDGDYQSIDLSTW-LA-SNPSSVLGNTFQISPELTKK 347 (361)
T ss_dssp ECSTTCEEEEEECTTCEEEECTTCEEEEECCSSS-CEEEEEEESSSSCCCEEHHHH-HH-TSCHHHHHHHHTCCHHHHTT
T ss_pred EcCCCcEEEEEECCCCEEEECCCCeEEeEECCCC-CEEEEEEECCCCcceeeHHHH-hh-hCCHHHHHHHHCcCHHHHHh
Confidence 8766766689999999999999999999999999 999999999999998888764 44 69999999999999999999
Q ss_pred HHhhcCC
Q 041665 198 IKAGLAA 204 (206)
Q Consensus 198 l~~~~~~ 204 (206)
||++..+
T Consensus 348 l~~~~~~ 354 (361)
T 2vqa_A 348 LPVQDTI 354 (361)
T ss_dssp SCCSCCS
T ss_pred hhccCCc
Confidence 9977643
No 16
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.90 E-value=2.6e-23 Score=184.81 Aligned_cols=134 Identities=15% Similarity=0.198 Sum_probs=118.9
Q ss_pred CCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeC------CC-cEEEEEEcC
Q 041665 59 DPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDT------TN-KLYTQTLQI 131 (206)
Q Consensus 59 ~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~------~~-~~~~~~L~~ 131 (206)
+..+|+++.+++.+ ++++++++++.||++.+||||+++.|+.||++|+++++++++ ++ +.+...|++
T Consensus 223 ~n~~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~ 296 (397)
T 2phl_A 223 GNEFGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSK 296 (397)
T ss_dssp EETTEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEET
T ss_pred cCCCCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecC
Confidence 45677899999887 789999999999999999999999999999999999999987 45 788999999
Q ss_pred CCEEEECCCCeEEEEeCCCCccEEEEEEe-cCCCcceeeec---hhhhcCCCC-----HHHHHHHcCCCHHHHHHHHhhc
Q 041665 132 GDMFVFPKGLVHYQYNSKANQPAAAISAF-GSASAGTVSVP---TTVFATGID-----ENILAKAFKTDVTTIQKIKAGL 202 (206)
Q Consensus 132 GD~~~~P~g~~H~~~N~g~~~~a~~i~~~-~s~~pg~~~~~---~~~f~~~~p-----~~vla~~f~~~~~~v~~l~~~~ 202 (206)
||+++||+|.+|++.|.+ .+.+++.. ++++|+.+.++ .++|+ .+| +++|+++|+++++++++|+++.
T Consensus 297 GDV~vvP~G~~h~~~n~~---~l~~l~f~~~s~~~~~~~laG~~~sv~~-~~p~~~~~~eVla~af~v~~~~v~~l~~~~ 372 (397)
T 2phl_A 297 DDVFVIPAAYPVAIKATS---NVNFTGFGINANNNNRNLLAGKTDNVIS-SIGRALDGKDVLGLTFSGSGDEVMKLINKQ 372 (397)
T ss_dssp TCEEEECTTCCEEEEESS---SEEEEEEEESCTTCCEEESSSSSSBHHH-HHHTSTTHHHHHHHHSSSCHHHHHHHHTTC
T ss_pred CCEEEECCCCeEEEEeCC---CeEEEEEECCCCCCcceecccchhhHHh-hCCCccchHHHHHHHhCcCHHHHHHHHhcC
Confidence 999999999999999985 46666654 45589998888 67887 488 9999999999999999999875
No 17
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.89 E-value=5.1e-23 Score=185.49 Aligned_cols=156 Identities=15% Similarity=0.159 Sum_probs=124.1
Q ss_pred cCCCCceEeccccccCCCCCCceEEEEeec--cccCCCCCCe-EEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEE
Q 041665 41 IDGNFFTFTGMRSIIEGDDPPIFRVSKASM--AEFPALNGQS-VSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGF 117 (206)
Q Consensus 41 ~~~~dF~~~~~~~~~~~~~~~g~~v~~~~~--~~~P~l~~~g-i~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~ 117 (206)
-..+.|+|+....... ....+|++..++. .+.|.+++.+ +++++++++||+..++| |++++|++||++|++++++
T Consensus 44 ~~~~p~vf~~~~~~~~-i~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~ 121 (445)
T 2cav_A 44 AQNNPYLFRSNKFLTL-FKNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVL 121 (445)
T ss_dssp --CCTTEECGGGEEEE-EEETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEE
T ss_pred CCCCCeEEchhhcCce-EEcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEE
Confidence 3455677765432101 1235788888754 4456888877 99999999999999999 6688999999999999999
Q ss_pred EeCCCcEEEEEEcCCCEEEECCCCeEEEEeCC-CCccEEEEEEec-CCCccee---eec-----hhhhcCCCCHHHHHHH
Q 041665 118 IDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSK-ANQPAAAISAFG-SASAGTV---SVP-----TTVFATGIDENILAKA 187 (206)
Q Consensus 118 ~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g-~~~~a~~i~~~~-s~~pg~~---~~~-----~~~f~~~~p~~vla~~ 187 (206)
.+++++ +++.|++||++++|+|..|+++|.| ++ +++++++++ +++||.+ .++ .++|+ ++|+++|+++
T Consensus 122 v~~~~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~-~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~-~~~~~vLa~a 198 (445)
T 2cav_A 122 VNPDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQ-NLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS-AFSKNFLEAS 198 (445)
T ss_dssp EETTEE-EEEEEETTEEEEECTTCCEEEEECCSSC-CEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG-GSCHHHHHHH
T ss_pred EeCCCC-EEEEecCCCEEEECCCCcEEEEECCCCC-CEEEEEEeccCCCCCceeeeeccCCCchhhhhh-cCCHHHHHHH
Confidence 876544 6899999999999999999999998 78 999999887 5567643 343 36776 6999999999
Q ss_pred cCCCHHHHHHHHhh
Q 041665 188 FKTDVTTIQKIKAG 201 (206)
Q Consensus 188 f~~~~~~v~~l~~~ 201 (206)
|+++.+++++|+++
T Consensus 199 f~v~~~~v~~l~~~ 212 (445)
T 2cav_A 199 YDSPYDEIEQTLLQ 212 (445)
T ss_dssp HTSCHHHHHHHTTS
T ss_pred hCCCHHHHHhhhcc
Confidence 99999999999953
No 18
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.88 E-value=3.1e-22 Score=179.87 Aligned_cols=152 Identities=16% Similarity=0.199 Sum_probs=123.1
Q ss_pred CCCceEeccc-cccCCCCCCceEEEEeec--cccCCCCCCe-EEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEE
Q 041665 43 GNFFTFTGMR-SIIEGDDPPIFRVSKASM--AEFPALNGQS-VSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFI 118 (206)
Q Consensus 43 ~~dF~~~~~~-~~~~~~~~~g~~v~~~~~--~~~P~l~~~g-i~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~ 118 (206)
.+.|.|+... .. ......+|+++.+.. .+.|.+++.+ +++++++++||+..+|| |++++|++||++|++++++.
T Consensus 20 ~~p~~f~~~~~~~-~~~~se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v 97 (434)
T 2ea7_A 20 NNPFYFNSDRWFR-TLYRNEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLV 97 (434)
T ss_dssp GCTTEECTTTSEE-EEEEETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEE
T ss_pred CCCeEEecccccc-ceEEcCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEE
Confidence 3557766433 11 112346888888743 5567788887 99999999999999999 77889999999999999998
Q ss_pred eCCCcEEEEEEcCCCEEEECCCCeEEEEeCC-CCccEEEEEEec-CCCccee---eech-----hhhcCCCCHHHHHHHc
Q 041665 119 DTTNKLYTQTLQIGDMFVFPKGLVHYQYNSK-ANQPAAAISAFG-SASAGTV---SVPT-----TVFATGIDENILAKAF 188 (206)
Q Consensus 119 ~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g-~~~~a~~i~~~~-s~~pg~~---~~~~-----~~f~~~~p~~vla~~f 188 (206)
++ ++.+++.|++||+++||+|.+|++.|.| ++ ++++++++. +++||.+ .++. ++|+ ++|++||+++|
T Consensus 98 ~~-~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e-~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~-~~~~~vLa~af 174 (434)
T 2ea7_A 98 NP-DSRDSYILEQGHAQKIPAGTTFFLVNPDDNE-NLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLR-GFSKNILEASF 174 (434)
T ss_dssp CS-SCEEEEEEETTEEEEECTTCEEEEEECCSSC-CEEEEEEEEESSBTTBCCEEECSCCSSCCCGGG-GSCHHHHHHHH
T ss_pred eC-CCCEEEEeCCCCEEEECCCccEEEEeCCCCC-CeEEEEEecCCCCCCceeeeeecCCcchhhhhh-cCCHHHHHHHh
Confidence 74 4566899999999999999999999998 77 999999874 5677642 3443 3675 69999999999
Q ss_pred CCCHHHHHHHH
Q 041665 189 KTDVTTIQKIK 199 (206)
Q Consensus 189 ~~~~~~v~~l~ 199 (206)
+++.+++++|+
T Consensus 175 ~v~~~~v~~l~ 185 (434)
T 2ea7_A 175 DSDFKEINRVL 185 (434)
T ss_dssp TSCHHHHHHHH
T ss_pred CCCHHHHHhhh
Confidence 99999999999
No 19
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.88 E-value=2.5e-22 Score=179.66 Aligned_cols=154 Identities=21% Similarity=0.245 Sum_probs=122.9
Q ss_pred CCCceEe-ccccccCCCCCCceEEEEeec--cccCCCCCCe-EEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEE
Q 041665 43 GNFFTFT-GMRSIIEGDDPPIFRVSKASM--AEFPALNGQS-VSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFI 118 (206)
Q Consensus 43 ~~dF~~~-~~~~~~~~~~~~g~~v~~~~~--~~~P~l~~~g-i~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~ 118 (206)
.+.|+|+ -.... ......+|+++.+.. ...+.+++.+ +++.+++++||+..++| |++++|++||++|++++++.
T Consensus 8 ~~p~~f~~~~~~~-~~~~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v 85 (416)
T 1uij_A 8 NNPFYFRSSNSFQ-TLFENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLV 85 (416)
T ss_dssp SCTTEECGGGSEE-EEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEE
T ss_pred CCCeEeccccccc-ceEEcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEE
Confidence 3456666 32211 112446888888643 3447777777 99999999999999999 76889999999999999998
Q ss_pred eCCCcEEEEEEcCCCEEEECCCCeEEEEeCC-CCccEEEEEEec-CCCccee---eech-----hhhcCCCCHHHHHHHc
Q 041665 119 DTTNKLYTQTLQIGDMFVFPKGLVHYQYNSK-ANQPAAAISAFG-SASAGTV---SVPT-----TVFATGIDENILAKAF 188 (206)
Q Consensus 119 ~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g-~~~~a~~i~~~~-s~~pg~~---~~~~-----~~f~~~~p~~vla~~f 188 (206)
++ ++.+++.|++||+++||+|.+|++.|.| ++ ++++++++. +++||.+ .++. ++|+ ++|++||+++|
T Consensus 86 ~~-~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e-~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~-~~~~~vLa~af 162 (416)
T 1uij_A 86 NN-DDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQ-NLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQ-GFSHNILETSF 162 (416)
T ss_dssp CS-SCEEEEEECTTEEEEECTTCEEEEEECCSSC-CEEEEEEEEESSBTTBCCEEESSCBSSCCCGGG-GSCHHHHHHHH
T ss_pred EC-CCCeEEEecCCCEEEECCCCeEEEEecCCCC-CEEEEEEeccCCCCCcceeeeecCCcccchhhh-cCCHHHHHHHh
Confidence 76 5556899999999999999999999995 88 999999885 5677643 3432 4675 69999999999
Q ss_pred CCCHHHHHHHH-hh
Q 041665 189 KTDVTTIQKIK-AG 201 (206)
Q Consensus 189 ~~~~~~v~~l~-~~ 201 (206)
+++.+++++|+ ++
T Consensus 163 ~v~~~~v~~l~~~~ 176 (416)
T 1uij_A 163 HSEFEEINRVLFGE 176 (416)
T ss_dssp TSCHHHHHHHHTCT
T ss_pred CcCHHHHHhhhhcc
Confidence 99999999999 44
No 20
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.87 E-value=2.9e-22 Score=180.96 Aligned_cols=139 Identities=17% Similarity=0.234 Sum_probs=117.2
Q ss_pred CceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-E---------------
Q 041665 61 PIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-L--------------- 124 (206)
Q Consensus 61 ~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~--------------- 124 (206)
.+|.+...+ ...|.|++.+++++++++.||+..+||||+ ++|++||++|++.++++.++++ .
T Consensus 44 e~G~~~~~~-~~~~~l~~~gvs~~r~~i~pggl~~Ph~h~-a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~ 121 (459)
T 2e9q_A 44 EAGFTEVWD-QDNDEFQCAGVNMIRHTIRPKGLLLPGFSN-APKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAF 121 (459)
T ss_dssp TTEEEEECC-TTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEEECCC-------CC
T ss_pred CCcEEEecC-CCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEeeEEEEEEEeCCCcchhccchhhcccccccc
Confidence 466666644 455999999999999999999999999996 7999999999999999866432 1
Q ss_pred -----EEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecCCC--------cceeeec--------------------
Q 041665 125 -----YTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGSAS--------AGTVSVP-------------------- 171 (206)
Q Consensus 125 -----~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~--------pg~~~~~-------------------- 171 (206)
..+.|++||+++||+|++||+.|.|++ ++++++++++.| +..+.++
T Consensus 122 ~d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~-~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~ 200 (459)
T 2e9q_A 122 KDQHQKIRPFREGDLLVVPAGVSHWMYNRGQS-DLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRKG 200 (459)
T ss_dssp CEEECCCEEEETTEEEEECTTCCEEEEECSSS-CEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC--------
T ss_pred ccccceeEEecCCCEEEECCCCCEEEEeCCCC-CEEEEEEecCCCcccccCcccceeeccCCccccchhhhccccccccc
Confidence 257999999999999999999999999 999999998665 3334443
Q ss_pred ------hhhhcCCCCHHHHHHHcCCCHHHHHHHHhhcC
Q 041665 172 ------TTVFATGIDENILAKAFKTDVTTIQKIKAGLA 203 (206)
Q Consensus 172 ------~~~f~~~~p~~vla~~f~~~~~~v~~l~~~~~ 203 (206)
.++|+ ++|+++|+++|+++.+++++|+++..
T Consensus 201 ~~~~~~~nif~-gf~~evLa~aF~v~~~~v~kL~~~~~ 237 (459)
T 2e9q_A 201 SSGEKSGNIFS-GFADEFLEEAFQIDGGLVRKLKGEDD 237 (459)
T ss_dssp ----CCCCTTT-TSCHHHHHHHHTCCHHHHHHHHTTTC
T ss_pred cccccccchhh-cCCHHHHHhhcCCCHHHHHhhhhccc
Confidence 36886 79999999999999999999997654
No 21
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.87 E-value=9.1e-22 Score=174.87 Aligned_cols=152 Identities=13% Similarity=0.112 Sum_probs=123.9
Q ss_pred CCCceEeccc-cccCCCCCCceEEEEe--eccccCCCCCCe-EEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEE
Q 041665 43 GNFFTFTGMR-SIIEGDDPPIFRVSKA--SMAEFPALNGQS-VSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFI 118 (206)
Q Consensus 43 ~~dF~~~~~~-~~~~~~~~~g~~v~~~--~~~~~P~l~~~g-i~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~ 118 (206)
.+.|+|.-.. -. +.....+|.++.+ ...+.|.+++.+ ++++++++.||+..+|||| +++|++||++|+++++++
T Consensus 11 ~~p~~f~~~~~~~-~~~~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~-~a~ei~yVl~G~~~v~~v 88 (397)
T 2phl_A 11 DNPFYFNSDNSWN-TLFKNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQA-DAELLLVVRSGSAILVLV 88 (397)
T ss_dssp CCTTEECGGGTEE-EEEEETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEE-SEEEEEEEEESEEEEEEE
T ss_pred CCCcEeccchhcc-ceEEcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEec-CCCeEEEEEeeeEEEEEE
Confidence 4456666433 11 1124568889987 455668999987 9999999999999999999 679999999999999999
Q ss_pred eCCCcEEEEEEcCCCE------EEECCCCeEEEEeCC-CCccEEEEEEecCCC-c--ceeeec-----hhhhcCCCCHHH
Q 041665 119 DTTNKLYTQTLQIGDM------FVFPKGLVHYQYNSK-ANQPAAAISAFGSAS-A--GTVSVP-----TTVFATGIDENI 183 (206)
Q Consensus 119 ~~~~~~~~~~L~~GD~------~~~P~g~~H~~~N~g-~~~~a~~i~~~~s~~-p--g~~~~~-----~~~f~~~~p~~v 183 (206)
+++++ .++.|++||+ ++||+|.+||+.|.| ++ ++++++++++.+ | ..+.++ .++|+ ++|++|
T Consensus 89 ~~~~~-~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~-~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~-~~~~~v 165 (397)
T 2phl_A 89 KPDDR-REYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKE-DLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQ-EFSKHI 165 (397)
T ss_dssp ETTTE-EEEEEEESSCTTSCSEEEECTTCEEEEEECCSSC-CEEEEEEEEESSSSSCCEEECCCBTTBCCGGG-GSCHHH
T ss_pred eCCCc-EEEEECCCCcccccceEEECCCCcEEEEeCCCCC-CeEEEEeecCCCCccceeeeccCCCchhHHhh-cCCHHH
Confidence 87665 5899999999 999999999999999 67 899999886543 4 234443 24665 699999
Q ss_pred HHHHcCCCHHHHHHHH
Q 041665 184 LAKAFKTDVTTIQKIK 199 (206)
Q Consensus 184 la~~f~~~~~~v~~l~ 199 (206)
|+++|+++.+++++|+
T Consensus 166 La~af~v~~~~v~~l~ 181 (397)
T 2phl_A 166 LEASFNSKFEEINRVL 181 (397)
T ss_dssp HHHHHTSCHHHHHHHH
T ss_pred HHHHhCCCHHHHHhhh
Confidence 9999999999999999
No 22
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.86 E-value=9.2e-22 Score=178.48 Aligned_cols=139 Identities=15% Similarity=0.238 Sum_probs=116.4
Q ss_pred CceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-----------------
Q 041665 61 PIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK----------------- 123 (206)
Q Consensus 61 ~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~----------------- 123 (206)
.+|.+..++.. .|.+++.|++++++++.||+..+||||+ +.|++||++|++.++++.++++
T Consensus 29 e~G~~e~~~~~-~~~l~~~gvs~~r~~l~Pggl~~Ph~~~-a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~ 106 (476)
T 1fxz_A 29 EGGLIETWNPN-NKPFQCAGVALSRCTLNRNALRRPSYTN-GPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSR 106 (476)
T ss_dssp TTEEEEECCTT-SHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEEEEECTTCCCC---------------
T ss_pred CCceEEeeCCC-ChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEecEEEEEEEcCCCcchhhccccccccccccc
Confidence 46667765544 4889888999999999999999999997 6999999999999999976432
Q ss_pred -----EEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecCCCc--------ceeeec-------------------
Q 041665 124 -----LYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGSASA--------GTVSVP------------------- 171 (206)
Q Consensus 124 -----~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~p--------g~~~~~------------------- 171 (206)
...+.|++||+++||+|++||+.|.|++ ++++++++++.++ ..+.++
T Consensus 107 ~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~-~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ 185 (476)
T 1fxz_A 107 PQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDT-PVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQS 185 (476)
T ss_dssp ---CCCCEEEECTTEEEEECTTCEEEEEECSSS-CEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC-------
T ss_pred cccccceEEEEeCCCEEEECCCCcEEEEeCCCC-CEEEEEEecCCCcccccCCccceeeccCCccccccccccccccccc
Confidence 1268999999999999999999999999 9999999986553 233443
Q ss_pred -------------hhhhcCCCCHHHHHHHcCCCHHHHHHHHhhcC
Q 041665 172 -------------TTVFATGIDENILAKAFKTDVTTIQKIKAGLA 203 (206)
Q Consensus 172 -------------~~~f~~~~p~~vla~~f~~~~~~v~~l~~~~~ 203 (206)
.++|+ ++|+++|+++|+++.+++++|+++..
T Consensus 186 ~~~~~~~~~~~~~~~if~-gf~~~vLa~af~v~~~~~~kl~~~~~ 229 (476)
T 1fxz_A 186 QKGKHQQEEENEGGSILS-GFTLEFLEHAFSVDKQIAKNLQGENE 229 (476)
T ss_dssp ------------CCCGGG-GSCHHHHHHHHTCCHHHHHHHSCC--
T ss_pred cccccccccccccchhhh-cCCHHHHHhhhCCCHHHHHhhhcccc
Confidence 36885 79999999999999999999997653
No 23
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.86 E-value=4e-21 Score=171.75 Aligned_cols=137 Identities=18% Similarity=0.307 Sum_probs=111.7
Q ss_pred CCCceEEEEee-----ccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCC
Q 041665 59 DPPIFRVSKAS-----MAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGD 133 (206)
Q Consensus 59 ~~~g~~v~~~~-----~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD 133 (206)
....|.++.+. ...+|+|++. .+.++++.|++..+|| |++++|++||++|+++++++++ ++.+++.|++||
T Consensus 19 ~se~G~i~~l~~f~~~s~~l~~l~~~--~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~-~~~~~~~l~~GD 94 (418)
T 3s7i_A 19 GNQNGRIRVLQRFDQRSRQFQNLQNH--RIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANG-NNRKSFNLDEGH 94 (418)
T ss_dssp ECSSEEEEEECCHHHHCGGGGGGTTC--EEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECS-SCEEEEEEETTE
T ss_pred EcCCcEEEEecccCCcchhcccccce--EEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEec-CCEEEEEecCCC
Confidence 45678888884 3577777766 6668889999999999 8899999999999999999987 455689999999
Q ss_pred EEEECCCCeEEEEeCCCCccEEEEE-EecCCCcceeee--------chhhhcCCCCHHHHHHHcCCCHHHHHHHHh
Q 041665 134 MFVFPKGLVHYQYNSKANQPAAAIS-AFGSASAGTVSV--------PTTVFATGIDENILAKAFKTDVTTIQKIKA 200 (206)
Q Consensus 134 ~~~~P~g~~H~~~N~g~~~~a~~i~-~~~s~~pg~~~~--------~~~~f~~~~p~~vla~~f~~~~~~v~~l~~ 200 (206)
+++||+|.+||+.|.++.+.+++++ ..++++||.+.. +.++|+ ++|++||+++|+++.+++++|++
T Consensus 95 v~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~-gf~~evLa~af~v~~~~v~kl~~ 169 (418)
T 3s7i_A 95 ALRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQ-GFSRNTLEAAFNAEFNEIRRVLL 169 (418)
T ss_dssp EEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGG-GSCHHHHHHHHTSCHHHHHHHTT
T ss_pred EEEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhh-cCCHHHHHHHHCcCHHHHHhhhc
Confidence 9999999999999988762444443 356677876432 135775 79999999999999999999983
No 24
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.85 E-value=4.1e-21 Score=173.21 Aligned_cols=138 Identities=21% Similarity=0.334 Sum_probs=117.5
Q ss_pred CCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCC-cEE-------------
Q 041665 60 PPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTN-KLY------------- 125 (206)
Q Consensus 60 ~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~-~~~------------- 125 (206)
..||.+..++..+ +.+++.|++++++++.||+..+|||| ++.|++||++|++.+++..++. +.+
T Consensus 30 se~G~~e~~d~~~-~~l~~~gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~ 107 (465)
T 3qac_A 30 AERGLTEVWDSNE-QEFRCAGVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDE 107 (465)
T ss_dssp ETTEEEEECCTTS-HHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTCCCCC-------------
T ss_pred CCCcEEEEECCCC-hhhcccceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCCCceeecchhcccccccc
Confidence 3578888888666 57888899999999999999999999 8899999999999999986521 211
Q ss_pred -----------------------EEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecCCCc---------ceeeec--
Q 041665 126 -----------------------TQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGSASA---------GTVSVP-- 171 (206)
Q Consensus 126 -----------------------~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~p---------g~~~~~-- 171 (206)
.+.+++||++++|+|+.||+.|.|++ ++++++++++.|+ ..+.++
T Consensus 108 ~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~-~lv~v~~~d~~n~~nqld~~~~r~F~LaG~ 186 (465)
T 3qac_A 108 RIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQ-PLVAVILIDTANHANQLDKNFPTRFYLAGK 186 (465)
T ss_dssp -----------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSS-CEEEEEEECTTSTTCCSCSSSCCEEESSSC
T ss_pred ccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCC-CEEEEEEEcCCCcccccccccceeEEecCC
Confidence 56999999999999999999999999 9999999987543 345554
Q ss_pred ----------------------hhhhcCCCCHHHHHHHcCCCHHHHHHHHhh
Q 041665 172 ----------------------TTVFATGIDENILAKAFKTDVTTIQKIKAG 201 (206)
Q Consensus 172 ----------------------~~~f~~~~p~~vla~~f~~~~~~v~~l~~~ 201 (206)
.++|. ++++++|+++|+++.+++++|++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~ni~s-gF~~e~La~Af~v~~~~~~kl~~~ 237 (465)
T 3qac_A 187 PQQEHSGEHQFSRESRRGERNTGNIFR-GFETRLLAESFGVSEEIAQKLQAE 237 (465)
T ss_dssp CCCSCC--------------CCCCGGG-GSCHHHHHHHHTCCHHHHHHHHTT
T ss_pred Cccccccccccccccccccccccchhh-cCCHHHHHHHhCCCHHHHHHhhhc
Confidence 35775 799999999999999999999865
No 25
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.83 E-value=6.6e-20 Score=160.11 Aligned_cols=149 Identities=17% Similarity=0.248 Sum_probs=124.1
Q ss_pred ceEeccccccCCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEE
Q 041665 46 FTFTGMRSIIEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLY 125 (206)
Q Consensus 46 F~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~ 125 (206)
|.|+....+. . ...||.++.++..++|...+ +++.++++.||+..++|||+++.|++||++|++++++.+++|+..
T Consensus 21 ~~~~~~~~~~-~-~~~~G~~~~~~~~~~p~~~~--~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~ 96 (361)
T 2vqa_A 21 FTYAFSKTPL-V-LYDGGTTKQVGTYNFPVSKG--MAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVE 96 (361)
T ss_dssp SEECGGGSCC-E-EETTEEEEEESTTTCTTCCS--CEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEE
T ss_pred eEEEcccCCc-e-ecCCceEEEeChhhCccccc--eeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEE
Confidence 6666543332 2 23688999999999998765 588999999999999999986799999999999999988766545
Q ss_pred EEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecCCCcc---eeeechhhhcCCCCHHHHHHHcCCCHHHHHHHHhh
Q 041665 126 TQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGSASAG---TVSVPTTVFATGIDENILAKAFKTDVTTIQKIKAG 201 (206)
Q Consensus 126 ~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg---~~~~~~~~f~~~~p~~vla~~f~~~~~~v~~l~~~ 201 (206)
.+.|++||+++||+|.+|++.|.+++ +++++.+++..++. .+... .+|+ .+|.++|+++|+++.+.++++++.
T Consensus 97 ~~~l~~GD~~~ip~g~~H~~~n~~~~-~~~~l~v~~~~~~~~~~~~~~~-~~~~-~~p~~vLa~~~~v~~~~~~~l~~~ 172 (361)
T 2vqa_A 97 IADVDKGGLWYFPRGWGHSIEGIGPD-TAKFLLVFNDGTFSEGATFSVT-DWLS-HTPIAWVEENLGWTAAQVAQLPKK 172 (361)
T ss_dssp EEEEETTEEEEECTTCEEEEEECSSS-CEEEEEEESSTTCCTTSSEEHH-HHHH-TSCHHHHHHHHTCCHHHHTTSCSS
T ss_pred EEEEcCCCEEEECCCCeEEEEeCCCC-CEEEEEEECCCCccccceecHh-HHHH-hCCHHHHHHHhCcCHHHHHhcccc
Confidence 79999999999999999999999988 99999999887664 34443 4455 699999999999999999888754
No 26
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.83 E-value=2.1e-20 Score=169.75 Aligned_cols=135 Identities=16% Similarity=0.323 Sum_probs=114.8
Q ss_pred CceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCC-CcEE--------------
Q 041665 61 PIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTT-NKLY-------------- 125 (206)
Q Consensus 61 ~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~-~~~~-------------- 125 (206)
.+|.+..++ .+.|+|++.|++++++++.||++.+||+| +++|++||++|++.++++.++ .+.+
T Consensus 27 e~G~~e~~~-~~~~~L~~~gvs~~R~~i~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~ 104 (496)
T 3ksc_A 27 EGGLIETWN-PNNKQFRCAGVALSRATLQRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRY 104 (496)
T ss_dssp TTEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTCCCC---------------
T ss_pred CCcEEEecc-ccchhhccCCceEEEEEecCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCCCccchhhhhccccccccc
Confidence 356555554 67899999999999999999999999999 799999999999999998763 1222
Q ss_pred ------EEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecCCCcc--------eeeec--------------------
Q 041665 126 ------TQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGSASAG--------TVSVP-------------------- 171 (206)
Q Consensus 126 ------~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg--------~~~~~-------------------- 171 (206)
.+.|++||+++||+|++||+.|.|++ +++++++++..++. .+.++
T Consensus 105 ~d~~qk~~~l~~GDV~viPaG~~h~~~N~G~~-~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~~ 183 (496)
T 3ksc_A 105 RDRHQKVNRFREGDIIAVPTGIVFWMYNDQDT-PVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQEQ 183 (496)
T ss_dssp CCCCCCEEEECTTEEEEECTTCEEEEEECSSS-CEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC--------
T ss_pred ccchheeeccCCCCEEEECCCCcEEEEcCCCC-CEEEEEEeccCcccccCCCceeeeEecCCCccccccccccccccccc
Confidence 45999999999999999999999999 99999999776542 23332
Q ss_pred ----hhhhcCCCCHHHHHHHcCCCHHHHHHHH
Q 041665 172 ----TTVFATGIDENILAKAFKTDVTTIQKIK 199 (206)
Q Consensus 172 ----~~~f~~~~p~~vla~~f~~~~~~v~~l~ 199 (206)
.++|. ++++++|+.||+++.++++||.
T Consensus 184 ~~~~~ni~s-gF~~e~La~Af~v~~e~~~kl~ 214 (496)
T 3ksc_A 184 ENEGNNIFS-GFKRDFLEDAFNVNRHIVDRLQ 214 (496)
T ss_dssp ---CCSGGG-GSCHHHHHHHHTCCHHHHHHHT
T ss_pred cccCCCchh-hcCHHHHHHHHCCCHHHHHHHH
Confidence 36775 7999999999999999999998
No 27
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.82 E-value=2.8e-19 Score=157.59 Aligned_cols=156 Identities=18% Similarity=0.202 Sum_probs=127.9
Q ss_pred CCCCceEeccccccCCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCC
Q 041665 42 DGNFFTFTGMRSIIEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTT 121 (206)
Q Consensus 42 ~~~dF~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~ 121 (206)
.+..|+|+...... . ...++.++.+....++..+ ++.+.+++++||+..++|||+.+.|++||++|++++.+.+.+
T Consensus 222 ~~~~~v~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~ 297 (385)
T 1j58_A 222 VPYPFTYRLLEQEP-I-ESEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASD 297 (385)
T ss_dssp CSSCSEEEGGGSCC-E-ECSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEET
T ss_pred CCCCeeeecccCCC-e-eCCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCC
Confidence 35567777654332 2 2346777887777777543 478999999999999999998879999999999999998555
Q ss_pred CcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecCCCcceeeechhhhcCCCCHHHHHHHcCCCHHHHHHHHhh
Q 041665 122 NKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGSASAGTVSVPTTVFATGIDENILAKAFKTDVTTIQKIKAG 201 (206)
Q Consensus 122 ~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg~~~~~~~~f~~~~p~~vla~~f~~~~~~v~~l~~~ 201 (206)
|+-.++.|++||++++|++.+|++.|.+++ ++++++++....+....+..++ + .+|+++++++|+++++++++|++.
T Consensus 298 g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~-~~~~l~v~~~~~~~d~~~~~~l-~-~~~~~v~~~~f~~~~~~~~~l~~~ 374 (385)
T 1j58_A 298 GHARTFNYQAGDVGYVPFAMGHYVENIGDE-PLVFLEIFKDDHYADVSLNQWL-A-MLPETFVQAHLDLGKDFTDVLSKE 374 (385)
T ss_dssp TEEEEEEEESSCEEEECTTCBEEEEECSSS-CEEEEEEESSSSCCCEEHHHHH-H-TSCHHHHHHHHTCCHHHHTTCCSS
T ss_pred CcEEEEEEcCCCEEEECCCCeEEEEECCCC-CEEEEEEECCCCccccCHHHHH-H-hCCHHHHHHHhCCCHHHHHhhhcc
Confidence 544489999999999999999999999999 9999999988877776666654 3 599999999999999999999976
Q ss_pred cCC
Q 041665 202 LAA 204 (206)
Q Consensus 202 ~~~ 204 (206)
..+
T Consensus 375 ~~~ 377 (385)
T 1j58_A 375 KHP 377 (385)
T ss_dssp CCS
T ss_pred CCc
Confidence 543
No 28
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.82 E-value=3.5e-20 Score=167.19 Aligned_cols=138 Identities=23% Similarity=0.314 Sum_probs=116.7
Q ss_pred CCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCC-cE--------------
Q 041665 60 PPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTN-KL-------------- 124 (206)
Q Consensus 60 ~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~-~~-------------- 124 (206)
..+|.+..++..+ |.|++.|++++++++.||+..+||+|+ +.|++||++|++++++..+.- +.
T Consensus 23 se~G~~e~w~~~~-~~L~~~gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~ 100 (466)
T 3kgl_A 23 AEAGRIEVWDHHA-PQLRCSGVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSP 100 (466)
T ss_dssp ETTEEEEECCTTS-HHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC---
T ss_pred CCCcEEEEECCCC-hhhccCCeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEecCCCcchhhcccccccccccc
Confidence 3577888888776 999999999999999999999999997 799999999999999996511 00
Q ss_pred --------------------------------------------EEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEe
Q 041665 125 --------------------------------------------YTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAF 160 (206)
Q Consensus 125 --------------------------------------------~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~ 160 (206)
..+.|++||+++||+|.+||+.|.|++ ++++++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e-~L~~l~~~ 179 (466)
T 3kgl_A 101 FGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQ-PLVIVSVL 179 (466)
T ss_dssp --------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSS-CEEEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCC-cEEEEEEE
Confidence 125899999999999999999999998 99999998
Q ss_pred cCCCc--------ceeeec------------------hhhhcCCCCHHHHHHHcCCCHHHHHHHHhh
Q 041665 161 GSASA--------GTVSVP------------------TTVFATGIDENILAKAFKTDVTTIQKIKAG 201 (206)
Q Consensus 161 ~s~~p--------g~~~~~------------------~~~f~~~~p~~vla~~f~~~~~~v~~l~~~ 201 (206)
++.|. ..+.++ .++|. ++++++|+++|+++.++++||++.
T Consensus 180 d~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~s-GF~~e~La~Af~v~~e~~~kL~~~ 245 (466)
T 3kgl_A 180 DLASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILN-GFTPEVLAKAFKIDVRTAQQLQNQ 245 (466)
T ss_dssp ESSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGG-GSCHHHHHHHHTSCHHHHHHHTCT
T ss_pred cCCCcccccCCceeeeEecCCCccccccccccccccCCCccc-cCCHHHHHHHhCCCHHHHHHHhcc
Confidence 66543 334443 26775 799999999999999999999865
No 29
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.82 E-value=4.7e-20 Score=167.85 Aligned_cols=138 Identities=21% Similarity=0.355 Sum_probs=114.0
Q ss_pred ceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCC-----------------c-
Q 041665 62 IFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTN-----------------K- 123 (206)
Q Consensus 62 g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~-----------------~- 123 (206)
||.+..+ ....|.|++.++++.++++.||+..+||||+ +.|++||++|++.++++.++. +
T Consensus 27 ~G~~e~~-~~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~-~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~ 104 (493)
T 2d5f_A 27 GGLIETW-NSQHPELQCAGVTVSKRTLNRNGLHLPSYSP-YPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQ 104 (493)
T ss_dssp SEEEEEC-CTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECEEEEEECCTTCCCCEEECC-----------
T ss_pred CcEEEEe-CCCChhhccCCEEEEEEEeCCCcEeCceecC-CCeEEEEEeCEEEEEEEeCCCccccccccccccccccccc
Confidence 6655554 4555899999999999999999999999997 589999999999999985421 0
Q ss_pred -------EEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecCCCc--------ceeeec-----------------
Q 041665 124 -------LYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGSASA--------GTVSVP----------------- 171 (206)
Q Consensus 124 -------~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~p--------g~~~~~----------------- 171 (206)
...+.|++||+++||+|++||+.|.|++ +++++++++..+. ..+.++
T Consensus 105 ~~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~-~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~ 183 (493)
T 2d5f_A 105 QQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDE-PVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQQ 183 (493)
T ss_dssp --CSEEESCEEEEETTEEEEECTTCCEEEEECSSS-CEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC-----
T ss_pred cccccccceEEEecCCCEEEECCCCcEEEEeCCCC-CEEEEEEecCcCcccccccccceeeccCCccccchhhhhhcccc
Confidence 1257999999999999999999999999 9999999874432 333443
Q ss_pred ------------------hhhhcCCCCHHHHHHHcCCCHHHHHHHHhhcC
Q 041665 172 ------------------TTVFATGIDENILAKAFKTDVTTIQKIKAGLA 203 (206)
Q Consensus 172 ------------------~~~f~~~~p~~vla~~f~~~~~~v~~l~~~~~ 203 (206)
.++|. ++++++|+++|+++.+++++|++...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~nif~-gf~~e~La~aF~v~~~~v~kl~~~~~ 232 (493)
T 2d5f_A 184 KSHGGRKQGQHQQQEEEGGSVLS-GFSKHFLAQSFNTNEDTAEKLRSPDD 232 (493)
T ss_dssp ----------------CCCCGGG-GSCHHHHHHHTTCCHHHHHHTTCTTC
T ss_pred cccccccccccccccccccchhh-cCCHHHHHhHhCCCHHHHHHhhhccc
Confidence 35775 79999999999999999999997654
No 30
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.81 E-value=1e-19 Score=165.83 Aligned_cols=137 Identities=18% Similarity=0.284 Sum_probs=114.1
Q ss_pred CceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-----------------
Q 041665 61 PIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK----------------- 123 (206)
Q Consensus 61 ~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~----------------- 123 (206)
.+|.+..++.. .|.|++.|++++++++.||+..+||||+ +.|++||++|++.++++.+++.
T Consensus 29 e~G~~e~~~~~-~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~ 106 (510)
T 3c3v_A 29 EGGYIETWNPN-NQEFECAGVALSRLVLRRNALRRPFYSN-APQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQR 106 (510)
T ss_dssp TTEEEEECCTT-SHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECCEEEEEECTTCCCCEEEECCC--------
T ss_pred CCceEEEeCCC-CcccccCcEEEEEEEECCCCCccceecC-CCeEEEEEeCEEEEEEEeCCCcccccccccccccccccc
Confidence 46666666544 4999999999999999999999999996 6999999999999999975320
Q ss_pred ------------------EEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecCCCc--------ceeeec------
Q 041665 124 ------------------LYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGSASA--------GTVSVP------ 171 (206)
Q Consensus 124 ------------------~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~p--------g~~~~~------ 171 (206)
...+.|++||+++||+|++||+.|.|++ +++++++++..|+ ..+.++
T Consensus 107 ~~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~-~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~~~ 185 (510)
T 3c3v_A 107 PPRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDT-DVVAVSLTDTNNNDNQLDQFPRRFNLAGNHEQE 185 (510)
T ss_dssp ------------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSS-CEEEEEEECTTBTTCCSCSCCCCEESSCCCCCT
T ss_pred ccccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCC-CEEEEEEeCCCCcccccccccceeEecCCcccc
Confidence 0147899999999999999999999999 9999999977753 223332
Q ss_pred ------------------------------------------------------hhhhcCCCCHHHHHHHcCCC-HHHHH
Q 041665 172 ------------------------------------------------------TTVFATGIDENILAKAFKTD-VTTIQ 196 (206)
Q Consensus 172 ------------------------------------------------------~~~f~~~~p~~vla~~f~~~-~~~v~ 196 (206)
.++|. ++++++|+++|+++ .++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~s-gF~~~~La~af~v~~~~~~~ 264 (510)
T 3c3v_A 186 FLRYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFS-GFTPEFLAQAFQVDDRQIVQ 264 (510)
T ss_dssp TGGGCC------------------------------------------------CCTGG-GSCHHHHHHHHTCCCHHHHH
T ss_pred cchhhhcccccccccccccccccccccccccccccccccccccccccccccccccccee-cCCHHHHHHHhCCCHHHHHH
Confidence 24665 89999999999999 99999
Q ss_pred HHHhh
Q 041665 197 KIKAG 201 (206)
Q Consensus 197 ~l~~~ 201 (206)
+|++.
T Consensus 265 ~l~~~ 269 (510)
T 3c3v_A 265 NLRGE 269 (510)
T ss_dssp HHTTT
T ss_pred Hhhcc
Confidence 99864
No 31
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.78 E-value=5.2e-19 Score=155.92 Aligned_cols=147 Identities=20% Similarity=0.284 Sum_probs=120.7
Q ss_pred ceEeccccccCCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEE
Q 041665 46 FTFTGMRSIIEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLY 125 (206)
Q Consensus 46 F~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~ 125 (206)
+.|+....... ...||+++.++...+|.++ ++++.++++.||+..++|||+ +.|++||++|++++.+.+++|+.+
T Consensus 48 ~~~~~~~~~~~--~~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~g~~~ 122 (385)
T 1j58_A 48 MKFSFSDTHNR--LEKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEKGRSF 122 (385)
T ss_dssp CEECGGGSCCE--EETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTTSCEE
T ss_pred eEEEcccCCcc--ccCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCCCcEE
Confidence 55555333221 2368999999999999987 578999999999999999998 699999999999999998778766
Q ss_pred EEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecCCCcceee--echhhhcCCCCHHHHHHHcCCCHHHHHHHHh
Q 041665 126 TQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGSASAGTVS--VPTTVFATGIDENILAKAFKTDVTTIQKIKA 200 (206)
Q Consensus 126 ~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg~~~--~~~~~f~~~~p~~vla~~f~~~~~~v~~l~~ 200 (206)
.+.|++||+++||+|.+|++.|.+ + +++++.+++...+.... ...++|+ .+|.++|+++|+++.++++++++
T Consensus 123 ~~~l~~GD~~~ip~g~~H~~~n~~-~-~~~~~~v~~~~~~~~~~~~~~~~~~~-~~p~evla~~~~vs~~~~~~l~~ 196 (385)
T 1j58_A 123 IDDVGEGDLWYFPSGLPHSIQALE-E-GAEFLLVFDDGSFSENSTFQLTDWLA-HTPKEVIAANFGVTKEEISNLPG 196 (385)
T ss_dssp EEEEETTEEEEECTTCCEEEEEEE-E-EEEEEEEESCTTCCGGGEEEHHHHHH-TSCHHHHHHHHTCCTGGGTTSCS
T ss_pred EEEeCCCCEEEECCCCeEEEEECC-C-CEEEEEEECCCCccccchhhhhhhhh-cccHHHHHHHhCCCHHHHHhccc
Confidence 679999999999999999999987 5 68888889887764321 1234555 69999999999999988888764
No 32
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.77 E-value=1e-18 Score=159.00 Aligned_cols=138 Identities=17% Similarity=0.327 Sum_probs=114.6
Q ss_pred CCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCC------------------
Q 041665 60 PPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTT------------------ 121 (206)
Q Consensus 60 ~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~------------------ 121 (206)
.-||.+..++ .++|+|++.|++++++++.|++..+||+|+ +.|++||++|++.++++.+.
T Consensus 28 se~G~~e~w~-~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~~ 105 (531)
T 3fz3_A 28 AEAGQIETWN-FNQGDFQCAGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQQ 105 (531)
T ss_dssp ETTEEEEECC-TTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEECCCC--------
T ss_pred cCCceEEEeC-CCChhhccCcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEEEEEcCCCccccccccccccccccc
Confidence 3467777776 568999999999999999999999999997 89999999999999988541
Q ss_pred --------------------------------------------------------------C-cEEEEEEcCCCEEEEC
Q 041665 122 --------------------------------------------------------------N-KLYTQTLQIGDMFVFP 138 (206)
Q Consensus 122 --------------------------------------------------------------~-~~~~~~L~~GD~~~~P 138 (206)
+ ....+.+++||++.+|
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDviaiP 185 (531)
T 3fz3_A 106 EQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVAIP 185 (531)
T ss_dssp -----------------------------------------------------------CCSCEESCCEEEETTEEEEEC
T ss_pred cccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEEEC
Confidence 0 0115689999999999
Q ss_pred CCCeEEEEeCCCCccEEEEEEecCCCc--------ceeeec---------------------------------------
Q 041665 139 KGLVHYQYNSKANQPAAAISAFGSASA--------GTVSVP--------------------------------------- 171 (206)
Q Consensus 139 ~g~~H~~~N~g~~~~a~~i~~~~s~~p--------g~~~~~--------------------------------------- 171 (206)
+|+.||++|.|++ +++++++++..|. ..+.++
T Consensus 186 aG~~~w~yN~G~~-~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (531)
T 3fz3_A 186 AGVAYWSYNDGDQ-ELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRPRQQEQ 264 (531)
T ss_dssp TTCCEEEECCSSS-CEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC------------------------------
T ss_pred CCCeEEEEeCCCc-eEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccccccccchhhh
Confidence 9999999999999 9999998865432 222222
Q ss_pred ----hhhhcCCCCHHHHHHHcCCCHHHHHHHHhh
Q 041665 172 ----TTVFATGIDENILAKAFKTDVTTIQKIKAG 201 (206)
Q Consensus 172 ----~~~f~~~~p~~vla~~f~~~~~~v~~l~~~ 201 (206)
.++|. ++++++|+.||+++.++++||++.
T Consensus 265 ~~~~~nifs-GFs~e~La~A~~v~~~~a~kLq~~ 297 (531)
T 3fz3_A 265 QGNGNNVFS-GFNTQLLAQALNVNEETARNLQGQ 297 (531)
T ss_dssp --CCSSGGG-GSCHHHHHHHHTSCHHHHHHHHTS
T ss_pred cccCCCeee-cCCHHHHHHHHCCCHHHHHHHhcc
Confidence 36786 799999999999999999999864
No 33
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.63 E-value=1.4e-16 Score=111.12 Aligned_cols=74 Identities=18% Similarity=0.132 Sum_probs=64.7
Q ss_pred EeccccccCCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCC
Q 041665 48 FTGMRSIIEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTN 122 (206)
Q Consensus 48 ~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~ 122 (206)
|+...+.+.+++..|. ++.+++.++|+|+++++++.++++.||++.+||||+++.|++||++|++++++++.+|
T Consensus 4 fnl~~~~p~~~n~~G~-~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~g 77 (79)
T 1dgw_X 4 FNLRSRDPIYSNNYGK-LYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQ 77 (79)
T ss_dssp EETTSSCCSEECSSEE-EEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC-
T ss_pred cccccCCCCccCCCCc-EEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCCC
Confidence 5566666666565555 5999999999999999999999999999999999999999999999999999998755
No 34
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.62 E-value=1.6e-15 Score=112.90 Aligned_cols=83 Identities=24% Similarity=0.302 Sum_probs=72.8
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEE-EeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEE
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGF-IDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~-~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~ 158 (206)
++.+.+++++||+..++|||+...|++||++|++++.+ .++ .+.|++||++++|+|.+|++.|.+++ ++++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~~~-----~~~l~~Gd~~~i~~~~~H~~~n~~~~-~~~~l~ 111 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGNGI-----VTHLKAGDIAIAKPGQVHGAMNSGPE-PFIFVS 111 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECSTTC-----EEEEETTEEEEECTTCCCEEEECSSS-CEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECCCe-----EEEeCCCCEEEECCCCEEEeEeCCCC-CEEEEE
Confidence 45888999999999999999877999999999999987 444 79999999999999999999999999 999999
Q ss_pred EecCCCccee
Q 041665 159 AFGSASAGTV 168 (206)
Q Consensus 159 ~~~s~~pg~~ 168 (206)
++....++..
T Consensus 112 v~~p~~~~~~ 121 (125)
T 3h8u_A 112 VVAPGNAGFA 121 (125)
T ss_dssp EEESTTCCCC
T ss_pred EECCCcccch
Confidence 9877665543
No 35
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.58 E-value=1.1e-14 Score=113.46 Aligned_cols=87 Identities=18% Similarity=0.250 Sum_probs=75.8
Q ss_pred CeEEEEEEEecCCC-cCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCC-CeEEEEeCCCCccEEE
Q 041665 79 QSVSTAILQFPAGA-INPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKG-LVHYQYNSKANQPAAA 156 (206)
Q Consensus 79 ~gi~~~~~~l~pg~-~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g-~~H~~~N~g~~~~a~~ 156 (206)
.++.+.+++++||+ ..++|||+...|++||++|++++.+.++ .+.|++||++++|+| ..|++.|.+++ ++++
T Consensus 44 ~~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~~~-----~~~l~~Gd~i~i~~~~~~H~~~n~~~~-~~~~ 117 (162)
T 3l2h_A 44 RHMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMEND-----QYPIAPGDFVGFPCHAAAHSISNDGTE-TLVC 117 (162)
T ss_dssp CSEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTSCCEEEECCSSS-CEEE
T ss_pred CeEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEECCE-----EEEeCCCCEEEECCCCceEEeEeCCCC-CEEE
Confidence 45788999999999 5899999767999999999999997655 899999999999998 99999999999 9999
Q ss_pred EEEecCCCcceeeec
Q 041665 157 ISAFGSASAGTVSVP 171 (206)
Q Consensus 157 i~~~~s~~pg~~~~~ 171 (206)
+++.....+....++
T Consensus 118 l~v~~p~~~~~~~~p 132 (162)
T 3l2h_A 118 LVIGQRLDQDVVDYP 132 (162)
T ss_dssp EEEEECCSEEEEEET
T ss_pred EEEECCCCCCeEecC
Confidence 998877665555544
No 36
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.58 E-value=6.3e-15 Score=105.56 Aligned_cols=78 Identities=19% Similarity=0.235 Sum_probs=67.9
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~ 158 (206)
..+.+.+++++||+..++|.|+...|++||++|++++.+.+ +. ..+.|++||++++|+|.+|++.|.+++ +++++.
T Consensus 16 ~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~--g~-~~~~l~~Gd~~~~p~~~~H~~~N~g~~-~~~~l~ 91 (97)
T 2fqp_A 16 ERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPE--GS-VTSQLTRGVSYTRPEGVEHNVINPSDT-EFVFVE 91 (97)
T ss_dssp SSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETT--EE-EEEEECTTCCEEECTTCEEEEECCSSS-CEEEEE
T ss_pred CeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCC--CC-EEEEEcCCCEEEeCCCCcccCEeCCCC-cEEEEE
Confidence 46789999999999999999987557999999999998754 10 179999999999999999999999999 888887
Q ss_pred Ee
Q 041665 159 AF 160 (206)
Q Consensus 159 ~~ 160 (206)
+-
T Consensus 92 v~ 93 (97)
T 2fqp_A 92 IE 93 (97)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 37
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.55 E-value=2e-14 Score=102.40 Aligned_cols=79 Identities=19% Similarity=0.237 Sum_probs=70.3
Q ss_pred CCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEE
Q 041665 78 GQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i 157 (206)
+.++.+..+.++||...++|+|+...|++||++|++++.+.++ .+.+++||++++|+|..|++.|.+++ +++++
T Consensus 25 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~~-~~~~~ 98 (105)
T 1v70_A 25 SERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVGEE-----EALLAPGMAAFAPAGAPHGVRNESAS-PALLL 98 (105)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTSCEEEECCSSS-CEEEE
T ss_pred CCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCC-CEEEE
Confidence 3457899999999999999999876899999999999987654 89999999999999999999999988 89988
Q ss_pred EEecC
Q 041665 158 SAFGS 162 (206)
Q Consensus 158 ~~~~s 162 (206)
.++..
T Consensus 99 ~v~~p 103 (105)
T 1v70_A 99 VVTAP 103 (105)
T ss_dssp EEEES
T ss_pred EEeCC
Confidence 87653
No 38
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.53 E-value=7.6e-14 Score=107.37 Aligned_cols=84 Identities=15% Similarity=0.206 Sum_probs=71.9
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i 157 (206)
..+.+.++.++||...++|+|+...|++||++|++++.+.++.+. .+.+.|++||++++|+|.+|++.|.+++ +++++
T Consensus 41 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~-~~~~l 119 (148)
T 2oa2_A 41 DHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNR-PLKLY 119 (148)
T ss_dssp SSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSS-CEEEE
T ss_pred CceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCC-CEEEE
Confidence 346888999999999999999876799999999999999876211 1238999999999999999999999998 89888
Q ss_pred EEecCC
Q 041665 158 SAFGSA 163 (206)
Q Consensus 158 ~~~~s~ 163 (206)
+++...
T Consensus 120 ~i~~~~ 125 (148)
T 2oa2_A 120 SIYAPP 125 (148)
T ss_dssp EEEESC
T ss_pred EEECCC
Confidence 887554
No 39
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.53 E-value=3.6e-14 Score=111.35 Aligned_cols=89 Identities=20% Similarity=0.220 Sum_probs=77.0
Q ss_pred CCCeEEEEEEEecCCCcC-CCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCC--CeEEEEeCCCCcc
Q 041665 77 NGQSVSTAILQFPAGAIN-PPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKG--LVHYQYNSKANQP 153 (206)
Q Consensus 77 ~~~gi~~~~~~l~pg~~~-~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g--~~H~~~N~g~~~~ 153 (206)
....+.+.+++++||+.. ++|+|+..+|++||++|++++.+.++ .+.|++||+++||+| ..|++.|.+++ +
T Consensus 39 ~~~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~~-----~~~l~~GD~i~ip~~~~~~H~~~n~~~~-~ 112 (163)
T 3i7d_A 39 GLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQG-----EHPMVPGDCAAFPAGDPNGHQFVNRTDA-P 112 (163)
T ss_dssp TCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCCCBEEECCSSS-C
T ss_pred CCCeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECCE-----EEEeCCCCEEEECCCCCcceEEEECCCC-C
Confidence 334688999999999965 89999876899999999999998665 899999999999999 99999999999 9
Q ss_pred EEEEEEecCCCcceeeec
Q 041665 154 AAAISAFGSASAGTVSVP 171 (206)
Q Consensus 154 a~~i~~~~s~~pg~~~~~ 171 (206)
++++++..........++
T Consensus 113 ~~~l~v~~p~~~d~~~yp 130 (163)
T 3i7d_A 113 ATFLVVGTRTPTETAYYS 130 (163)
T ss_dssp EEEEEEEECCSCEEEEET
T ss_pred EEEEEEECCCCCCcccCC
Confidence 999999877665554443
No 40
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.53 E-value=1.8e-13 Score=106.88 Aligned_cols=79 Identities=11% Similarity=0.140 Sum_probs=71.6
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~ 158 (206)
..+.+..++++||+..++|+|+. .|++||++|++++.++++ .+.|++||++++|+|.+|.+.|.+++ ++.+++
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~v~v~g~-----~~~l~~Gd~i~ip~~~~H~~~n~g~~-~~~~l~ 114 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHAH-VHAVMIHRGHGQCLVGET-----ISDVAQGDLVFIPPMTWHQFRANRGD-CLGFLC 114 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCCEEEECCSSS-CEEEEE
T ss_pred CcEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCC-CEEEEE
Confidence 56789999999999999999986 899999999999998665 89999999999999999999999999 999998
Q ss_pred EecCCC
Q 041665 159 AFGSAS 164 (206)
Q Consensus 159 ~~~s~~ 164 (206)
+++...
T Consensus 115 i~~~~~ 120 (156)
T 3kgz_A 115 VVNAAR 120 (156)
T ss_dssp EEESSC
T ss_pred EEeCCC
Confidence 886553
No 41
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.52 E-value=1e-13 Score=108.05 Aligned_cols=85 Identities=16% Similarity=0.189 Sum_probs=72.2
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCC----CcEEEEEEcCCCEEEECCCCeEEEEeCC-CCccE
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTT----NKLYTQTLQIGDMFVFPKGLVHYQYNSK-ANQPA 154 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~----~~~~~~~L~~GD~~~~P~g~~H~~~N~g-~~~~a 154 (206)
++.+.+++++||+..++|+|+. .|++||++|++++.+.+.. ++...+.|++||++++|+|.+|++.|.+ ++ ++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~-~~ 117 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRHSC-EEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHE-DL 117 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEESS-CEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSS-CE
T ss_pred cEEEEEEEECCCCcCCCeECCC-CeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCC-CE
Confidence 5788999999999999999965 8999999999999987621 1223899999999999999999999999 88 89
Q ss_pred EEEEEecCCCcc
Q 041665 155 AAISAFGSASAG 166 (206)
Q Consensus 155 ~~i~~~~s~~pg 166 (206)
++++++......
T Consensus 118 ~~l~i~~~~~~~ 129 (163)
T 1lr5_A 118 QVLVIISRPPAK 129 (163)
T ss_dssp EEEEEEESSSCC
T ss_pred EEEEEECCCCcc
Confidence 999887654333
No 42
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.52 E-value=2.2e-14 Score=119.52 Aligned_cols=83 Identities=18% Similarity=0.190 Sum_probs=71.8
Q ss_pred CCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEE--------EeC-------CCcEEEEEEcCCCEEEECCCC
Q 041665 77 NGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGF--------IDT-------TNKLYTQTLQIGDMFVFPKGL 141 (206)
Q Consensus 77 ~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~--------~~~-------~~~~~~~~L~~GD~~~~P~g~ 141 (206)
.+.++++.+++++||+..++|+|++.+|++||++|++++.+ .++ +++.+.+.+++||++++|+|.
T Consensus 39 ~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~ 118 (239)
T 2xlg_A 39 KDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHY 118 (239)
T ss_dssp TTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTE
T ss_pred CCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCC
Confidence 34578999999999999999999988999999999999988 333 124557999999999999999
Q ss_pred eEEEEeCCCCccEEE-EEEe
Q 041665 142 VHYQYNSKANQPAAA-ISAF 160 (206)
Q Consensus 142 ~H~~~N~g~~~~a~~-i~~~ 160 (206)
+|+++|.+++ ++++ +..+
T Consensus 119 ~H~~~N~~~~-~~~~~l~~~ 137 (239)
T 2xlg_A 119 MHGFVNPTDK-TLPIVFVWM 137 (239)
T ss_dssp EEEEECCSSS-CEEEEEEEE
T ss_pred CEEEEeCCCC-CEEEEEEEE
Confidence 9999999999 8888 6666
No 43
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.50 E-value=3.6e-13 Score=106.13 Aligned_cols=117 Identities=15% Similarity=0.141 Sum_probs=86.9
Q ss_pred CCcCCCCceEecccccc---CCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEE
Q 041665 39 DAIDGNFFTFTGMRSII---EGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEV 115 (206)
Q Consensus 39 ~~~~~~dF~~~~~~~~~---~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~ 115 (206)
.-+.++++.+++..... ......|...+.+....- +....++.+.+++++||+..++|||+ ..|++||++|++++
T Consensus 12 ~iv~~~~~~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~-g~~~~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~ 89 (167)
T 3ibm_A 12 RVLRERDYRWEGTEEEAYKAEGTHFSGARRQTLVGRPA-GQEAPAFETRYFEVEPGGYTTLERHE-HTHVVMVVRGHAEV 89 (167)
T ss_dssp EEECEETTEETTCCCC---------CCEEEEEEECTTT-TCCSSSEEEEEEEECTTCBCCCBBCS-SCEEEEEEESEEEE
T ss_pred ceeecCCcccccceeeeccCCCCcCCCcEEEEEECCCC-CCCCCcEEEEEEEECCCCCCCCccCC-CcEEEEEEeCEEEE
Confidence 34556667776643210 001123555554443332 22345688999999999999999997 59999999999999
Q ss_pred EEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCC-CCccEEEEEEecCC
Q 041665 116 GFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSK-ANQPAAAISAFGSA 163 (206)
Q Consensus 116 ~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g-~~~~a~~i~~~~s~ 163 (206)
.++++ .+.|++||+++||+|.+|++.|.+ ++ ++.+++++...
T Consensus 90 ~i~~~-----~~~l~~Gd~i~ip~~~~H~~~n~~~~~-~~~~l~i~~~~ 132 (167)
T 3ibm_A 90 VLDDR-----VEPLTPLDCVYIAPHAWHQIHATGANE-PLGFLCIVDSD 132 (167)
T ss_dssp EETTE-----EEEECTTCEEEECTTCCEEEEEESSSC-CEEEEEEEESS
T ss_pred EECCE-----EEEECCCCEEEECCCCcEEEEeCCCCC-CEEEEEEEeCC
Confidence 88665 899999999999999999999999 88 99999887654
No 44
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.50 E-value=5.8e-14 Score=111.44 Aligned_cols=79 Identities=18% Similarity=0.270 Sum_probs=72.7
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEE-eCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFI-DTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~-~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i 157 (206)
.|..+.+++++||+..++|.|.. .|++||++|++++.+. ++ ++.|++||++ ||+|..|+++|.+++ +++++
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~~-eE~~~VLeGel~l~ld~ge-----~~~L~~GDsi-~~~g~~H~~~N~g~~-~ar~l 148 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTNS-IDYGIVLEGEIELELDDGA-----KRTVRQGGII-VQRGTNHLWRNTTDK-PCRIA 148 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCSE-EEEEEEEESCEEEECGGGC-----EEEECTTCEE-EECSCCBEEECCSSS-CEEEE
T ss_pred CCeEEEEEEECCCCCCCCeecCc-eEEEEEEeCEEEEEECCCe-----EEEECCCCEE-EeCCCcEEEEeCCCC-CEEEE
Confidence 57899999999999999999965 8999999999999986 44 7999999999 999999999999999 99999
Q ss_pred EEecCCCc
Q 041665 158 SAFGSASA 165 (206)
Q Consensus 158 ~~~~s~~p 165 (206)
+++....|
T Consensus 149 ~V~~P~~p 156 (172)
T 3es1_A 149 FILIEAPA 156 (172)
T ss_dssp EEEEECCC
T ss_pred EEEcCCCc
Confidence 99987777
No 45
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.50 E-value=1.1e-13 Score=105.00 Aligned_cols=83 Identities=13% Similarity=0.215 Sum_probs=73.0
Q ss_pred CCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEE--EEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEE
Q 041665 78 GQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVG--FIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAA 155 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~--~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~ 155 (206)
+..+.+.+++++||+..++|+|+. .|++||++|++++. +.++ .+.+++||++++|+|.+|++.|.+++ +++
T Consensus 36 ~~~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~~-~~~ 108 (145)
T 3ht1_A 36 ADRFVLTEFEVSPNGSTPPHFHEW-EHEIYVLEGSMGLVLPDQGR-----TEEVGPGEAIFIPRGEPHGFVTGPGQ-TCR 108 (145)
T ss_dssp CCSEEEEEEEEEEEEECCCEECSS-CEEEEEEEECEEEEEGGGTE-----EEEECTTCEEEECTTCCBEEECCTTC-CEE
T ss_pred CCcEEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEEeECCE-----EEEECCCCEEEECCCCeEEeEcCCCC-CEE
Confidence 346789999999999999999986 88899999999998 6554 89999999999999999999999999 999
Q ss_pred EEEEecCCCcce
Q 041665 156 AISAFGSASAGT 167 (206)
Q Consensus 156 ~i~~~~s~~pg~ 167 (206)
++.++....|..
T Consensus 109 ~l~i~~~~~~~~ 120 (145)
T 3ht1_A 109 FLVVAPCERPPV 120 (145)
T ss_dssp EEEEEESCCCCC
T ss_pred EEEEECCCCCCe
Confidence 999887665543
No 46
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.50 E-value=3.6e-14 Score=104.81 Aligned_cols=76 Identities=16% Similarity=0.255 Sum_probs=65.4
Q ss_pred CCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEE
Q 041665 78 GQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i 157 (206)
+.++.+.++.++||...++|||+. .|++||++|++++.+.++ ++.|++||.+++|+|.+|++.|.++. ...++
T Consensus 33 ~~~~~v~~~~l~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~~~~H~~~~~~~~-~~~~~ 105 (114)
T 3fjs_A 33 EHRLEVMRMVLPAGKQVGSHSVAG-PSTIQCLEGEVEIGVDGA-----QRRLHQGDLLYLGAGAAHDVNAITNT-SLLVT 105 (114)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSS-CEEEEEEESCEEEEETTE-----EEEECTTEEEEECTTCCEEEEESSSE-EEEEE
T ss_pred CCCEEEEEEEECCCCccCceeCCC-cEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCcEEEEeCCCc-EEEEE
Confidence 345799999999999999999986 899999999999998665 89999999999999999999998765 45444
Q ss_pred EEe
Q 041665 158 SAF 160 (206)
Q Consensus 158 ~~~ 160 (206)
.++
T Consensus 106 ~v~ 108 (114)
T 3fjs_A 106 VVL 108 (114)
T ss_dssp EEC
T ss_pred EEe
Confidence 433
No 47
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.50 E-value=9.8e-14 Score=100.46 Aligned_cols=79 Identities=24% Similarity=0.328 Sum_probs=70.1
Q ss_pred CeEEEEEEEecCCCcCCCc--cCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEE
Q 041665 79 QSVSTAILQFPAGAINPPH--THPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAA 156 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H--~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~ 156 (206)
.++.+.+++++||...++| +|++..|++||++|++++.+.++ .+.|++||++++|+|..|++.|.+++ ++++
T Consensus 19 ~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~i~~~~~H~~~~~~~~-~~~~ 92 (113)
T 2gu9_A 19 RQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDGH-----TQALQAGSLIAIERGQAHEIRNTGDT-PLKT 92 (113)
T ss_dssp TTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEETTE-----EEEECTTEEEEECTTCCEEEECCSSS-CEEE
T ss_pred CcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEcCCCC-CEEE
Confidence 4578999999999998888 99856999999999999988654 79999999999999999999999988 8998
Q ss_pred EEEecCC
Q 041665 157 ISAFGSA 163 (206)
Q Consensus 157 i~~~~s~ 163 (206)
+.++...
T Consensus 93 ~~v~~~~ 99 (113)
T 2gu9_A 93 VNFYHPP 99 (113)
T ss_dssp EEEEESC
T ss_pred EEEECCC
Confidence 8887543
No 48
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.49 E-value=4.8e-13 Score=107.45 Aligned_cols=84 Identities=14% Similarity=0.166 Sum_probs=74.8
Q ss_pred CeEEEEEEEecCCCc------CCCccCC--CCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCC
Q 041665 79 QSVSTAILQFPAGAI------NPPHTHP--RSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKA 150 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~------~~~H~H~--~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~ 150 (206)
..+.+..+.++||+. .++|+|+ +..|++||++|++++.+.++.|+.+.+.+++||++++|+|..|++.|.++
T Consensus 65 ~~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~ 144 (190)
T 1x82_A 65 GDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGD 144 (190)
T ss_dssp TCEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSS
T ss_pred CCeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCc
Confidence 467888889999998 7899997 34799999999999999987677777999999999999999999999999
Q ss_pred CccEEEEEEecCC
Q 041665 151 NQPAAAISAFGSA 163 (206)
Q Consensus 151 ~~~a~~i~~~~s~ 163 (206)
+ ++++++++...
T Consensus 145 ~-~~~~l~v~~~~ 156 (190)
T 1x82_A 145 E-PFIFLAIYPAD 156 (190)
T ss_dssp S-CEEEEEEEETT
T ss_pred c-cEEEEEEECCC
Confidence 9 99998887654
No 49
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.49 E-value=9.7e-15 Score=105.53 Aligned_cols=81 Identities=15% Similarity=0.206 Sum_probs=69.4
Q ss_pred CCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEE
Q 041665 76 LNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAA 155 (206)
Q Consensus 76 l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~ 155 (206)
+.+..+.+.+++++||+..++|+|+...|+++|++|++++... ++......+++||++++|.|..|++.|.|++ +++
T Consensus 12 ien~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~--d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~-pl~ 88 (98)
T 3lag_A 12 IDNDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAP--DGTRSLAQLKTGRSYARKAGVQHDVRNESTA-EIV 88 (98)
T ss_dssp EESSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECT--TSCEECCCBCTTCCEEECTTCEEEEBCCSSS-CEE
T ss_pred EcCCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeC--CCceEEEEecCCcEEEEcCCCcEECEECCCC-eEE
Confidence 3445689999999999999999999878999999999988654 3443467799999999999999999999999 999
Q ss_pred EEEE
Q 041665 156 AISA 159 (206)
Q Consensus 156 ~i~~ 159 (206)
++.+
T Consensus 89 ~IeV 92 (98)
T 3lag_A 89 FLEI 92 (98)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9987
No 50
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.47 E-value=2.7e-13 Score=108.51 Aligned_cols=84 Identities=15% Similarity=0.190 Sum_probs=70.7
Q ss_pred CCCCCCeEEEEEEEecCCCcCC---CccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeC-C
Q 041665 74 PALNGQSVSTAILQFPAGAINP---PHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNS-K 149 (206)
Q Consensus 74 P~l~~~gi~~~~~~l~pg~~~~---~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~-g 149 (206)
+...+..+.+.+++++||+..+ +|+|+. .|++||++|++++.+.+. +....+.|++||.++||++.+|++.|. +
T Consensus 110 ~~~~~~~~~~~~~~~~pg~~~~~~~~h~h~~-~E~~~Vl~G~~~~~~~~~-~~~~~~~l~~GD~~~~~~~~~H~~~n~~~ 187 (198)
T 2bnm_A 110 RTKRAPSLVPLVVDVLTDNPDDAKFNSGHAG-NEFLFVLEGEIHMKWGDK-ENPKEALLPTGASMFVEEHVPHAFTAAKG 187 (198)
T ss_dssp CCTTSTTCEEEEEEECCCCGGGCCCCCCCSS-CEEEEEEESCEEEEESCT-TSCEEEEECTTCEEEECTTCCEEEEESTT
T ss_pred cCCCCCcceEEEEEEcCCCCCcccccccCCC-eEEEEEEeeeEEEEECCc-CCcccEEECCCCEEEeCCCCceEEEecCC
Confidence 3344556899999999999875 799987 999999999999998661 111289999999999999999999999 8
Q ss_pred CCccEEEEEEe
Q 041665 150 ANQPAAAISAF 160 (206)
Q Consensus 150 ~~~~a~~i~~~ 160 (206)
++ ++++++++
T Consensus 188 ~~-~~~~l~v~ 197 (198)
T 2bnm_A 188 TG-SAKLIAVN 197 (198)
T ss_dssp SC-CEEEEEEE
T ss_pred CC-CeEEEEEe
Confidence 88 99988875
No 51
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.46 E-value=2.6e-13 Score=102.67 Aligned_cols=78 Identities=15% Similarity=0.185 Sum_probs=69.3
Q ss_pred CCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEE
Q 041665 77 NGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAA 156 (206)
Q Consensus 77 ~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~ 156 (206)
.+..+.+.+++++||+..++|+|++..|++||++|++++.+.++ .+.|++||++++|+|.+|++.|.+++ ++++
T Consensus 53 ~~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~i~~~~~H~~~n~~~~-~~~~ 126 (133)
T 1o4t_A 53 HNKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDNGK-----DVPIKAGDVCFTDSGESHSIENTGNT-DLEF 126 (133)
T ss_dssp TTSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEETTE-----EEEEETTEEEEECTTCEEEEECCSSS-CEEE
T ss_pred CCceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEECCE-----EEEeCCCcEEEECCCCcEEeEECCCC-CEEE
Confidence 34567888999999998899999756999999999999987655 89999999999999999999999998 8988
Q ss_pred EEEe
Q 041665 157 ISAF 160 (206)
Q Consensus 157 i~~~ 160 (206)
+++.
T Consensus 127 l~v~ 130 (133)
T 1o4t_A 127 LAVI 130 (133)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
No 52
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.46 E-value=3.5e-13 Score=99.05 Aligned_cols=74 Identities=15% Similarity=0.207 Sum_probs=66.0
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEE-EEcCCCEEEECCCCeEEEEeCCCCccEEEEE
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQ-TLQIGDMFVFPKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~-~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~ 158 (206)
++.+.++.++||...++|+|+. .|++||++|++++.+.++ .+ .|++||++++|+|.+|++.|.+++ ++.++.
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~i~~~-----~~~~l~~Gd~i~ip~~~~H~~~~~~~~-~~~~l~ 98 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSNS-YVHLIIIKGEMTLTLEDQ-----EPHNYKEGNIVYVPFNVKMLIQNINSD-ILEFFV 98 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECSS-CEEEEEEESEEEEEETTS-----CCEEEETTCEEEECTTCEEEEECCSSS-EEEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCCC-cEEEEEEeCEEEEEECCE-----EEEEeCCCCEEEECCCCcEEeEcCCCC-CEEEEE
Confidence 4577888999999999999965 999999999999988655 57 999999999999999999999988 888887
Q ss_pred Ee
Q 041665 159 AF 160 (206)
Q Consensus 159 ~~ 160 (206)
+.
T Consensus 99 i~ 100 (117)
T 2b8m_A 99 VK 100 (117)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 53
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.45 E-value=4.7e-13 Score=105.55 Aligned_cols=78 Identities=9% Similarity=0.045 Sum_probs=70.9
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~ 158 (206)
.++.+..++++||+..++|||+. .|++||++|++++.++++ .+.+++||++++|+|.+|++.|.+++ ++++++
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~~~v~g~-----~~~l~~GD~i~ip~g~~H~~~n~~~~-~~~~l~ 123 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQH-AHGVMILKGRGHAMVGRA-----VSAVAPYDLVTIPGWSWHQFRAPADE-ALGFLC 123 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEECEEEEETTE-----EEEECTTCEEEECTTCCEEEECCTTS-CEEEEE
T ss_pred CeEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCC-CEEEEE
Confidence 56788999999999999999986 899999999999987655 89999999999999999999999999 999998
Q ss_pred EecCC
Q 041665 159 AFGSA 163 (206)
Q Consensus 159 ~~~s~ 163 (206)
+....
T Consensus 124 i~~~~ 128 (166)
T 3jzv_A 124 MVNAE 128 (166)
T ss_dssp EEESS
T ss_pred EEccC
Confidence 87654
No 54
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.44 E-value=9.6e-13 Score=101.34 Aligned_cols=79 Identities=20% Similarity=0.227 Sum_probs=71.0
Q ss_pred CCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEE-EEEcCCCEEEECCCCeEEEEeCCCCccEEE
Q 041665 78 GQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYT-QTLQIGDMFVFPKGLVHYQYNSKANQPAAA 156 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~-~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~ 156 (206)
+.++.+.+++++||...++|+|+. .|++||++|++++.+.++ . +.+++||++++|+|.+|++.|.+++ ++++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~~~~-----~~~~l~~Gd~i~ip~~~~H~~~n~~~~-~~~~ 117 (147)
T 2f4p_A 45 VFNTQVYDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQERGK-----PARILKKGDVVEIPPNVVHWHGAAPDE-ELVH 117 (147)
T ss_dssp SSSCEEEEEEECTTCEECSEECTT-CEEEEEEEEEEEEEETTS-----CCEEEETTCEEEECTTCCEEEEEBTTB-CEEE
T ss_pred CCcEEEEEEEECCCCccCceECCC-ceEEEEEeCEEEEEECCE-----EEEEECCCCEEEECCCCcEEeEeCCCC-CEEE
Confidence 346789999999999999999987 999999999999987665 5 8999999999999999999999998 8998
Q ss_pred EEEecCC
Q 041665 157 ISAFGSA 163 (206)
Q Consensus 157 i~~~~s~ 163 (206)
++++...
T Consensus 118 l~v~~~~ 124 (147)
T 2f4p_A 118 IGISTQV 124 (147)
T ss_dssp EEEECCG
T ss_pred EEEEccC
Confidence 8887654
No 55
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.43 E-value=2.8e-13 Score=100.61 Aligned_cols=77 Identities=18% Similarity=0.343 Sum_probs=67.6
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~ 158 (206)
.++.+.++.++||...++|+|+. .|++||++|++++.+.++ .+.+++||++++|+|..|.+.|.++ +++++.
T Consensus 39 ~~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~~l~ 110 (126)
T 4e2g_A 39 KNLMLNWVRIEPNTEMPAHEHPH-EQAGVMLEGTLELTIGEE-----TRVLRPGMAYTIPGGVRHRARTFED--GCLVLD 110 (126)
T ss_dssp SSCEEEEEEECTTCEEEEECCSS-EEEEEEEEECEEEEETTE-----EEEECTTEEEEECTTCCEEEECCTT--CEEEEE
T ss_pred CCeEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEECCC--CEEEEE
Confidence 35789999999999999999986 999999999999988654 7999999999999999999999865 477787
Q ss_pred EecCC
Q 041665 159 AFGSA 163 (206)
Q Consensus 159 ~~~s~ 163 (206)
++...
T Consensus 111 v~~p~ 115 (126)
T 4e2g_A 111 IFSPP 115 (126)
T ss_dssp EEESC
T ss_pred EECCC
Confidence 77643
No 56
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.43 E-value=3e-13 Score=101.21 Aligned_cols=77 Identities=17% Similarity=0.224 Sum_probs=69.5
Q ss_pred CCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEE
Q 041665 78 GQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i 157 (206)
+.++.+.+++++||...++|+|+. .|++||++|++++.+.++ .+.+++||++++|+|.+|++.|.+++ ++.++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~g~~H~~~~~~~~-~~~~l 117 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHPW-EHEIFVLKGKLTVLKEQG-----EETVEEGFYIFVEPNEIHGFRNDTDS-EVEFL 117 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCSS-CEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTCCEEEECCSSS-CEEEE
T ss_pred CCCEEEEEEEECCCCcCCceeCCC-cEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCcEEeEeCCCC-CEEEE
Confidence 557899999999999999999984 999999999999987665 79999999999999999999999988 88888
Q ss_pred EEec
Q 041665 158 SAFG 161 (206)
Q Consensus 158 ~~~~ 161 (206)
+++.
T Consensus 118 ~v~~ 121 (126)
T 1vj2_A 118 CLIP 121 (126)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7764
No 57
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.40 E-value=1.5e-12 Score=96.89 Aligned_cols=75 Identities=17% Similarity=0.208 Sum_probs=67.1
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~ 158 (206)
..+.+...+++||...++|||. ..|++||++|++++.++++ .+.+++||++++|+|.+|++.|.+++ ++.+++
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H~-~~Ei~~v~~G~~~~~i~~~-----~~~l~~Gd~~~i~~~~~H~~~~~~~~-~~~~~~ 104 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSHN-EYELFIVIQGNAIIRINDE-----DFPVTKGDLIIIPLDSEHHVINNNQE-DFHFYT 104 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCCS-SEEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTCCEEEEECSSS-CEEEEE
T ss_pred CCcEEEEEEECCCCccCCEecC-CeEEEEEEeCEEEEEECCE-----EEEECCCcEEEECCCCcEEeEeCCCC-CEEEEE
Confidence 4578889999999999999996 5999999999999998655 89999999999999999999999888 888776
Q ss_pred Ee
Q 041665 159 AF 160 (206)
Q Consensus 159 ~~ 160 (206)
++
T Consensus 105 i~ 106 (128)
T 4i4a_A 105 IW 106 (128)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 58
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.40 E-value=5.4e-13 Score=99.26 Aligned_cols=80 Identities=21% Similarity=0.202 Sum_probs=66.9
Q ss_pred CCeEEEEEEEecCCCcCC-CccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEE
Q 041665 78 GQSVSTAILQFPAGAINP-PHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAA 156 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~~~-~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~ 156 (206)
..++.+..+.++||...+ +|+|+..++++||++|++++.+.++ .+.+++||++++|+|.+|++.|.+++ ++.+
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~~~-----~~~l~~Gd~i~i~~~~~H~~~~~~~~-~~~~ 96 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITIDGE-----KIELQAGDWLRIAPDGKRQISAASDS-PIGF 96 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEETTE-----EEEEETTEEEEECTTCCEEEEEBTTB-CEEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEEEcCCCC-CEEE
Confidence 445678888999999887 8999763345559999999988654 79999999999999999999999888 8888
Q ss_pred EEEecCC
Q 041665 157 ISAFGSA 163 (206)
Q Consensus 157 i~~~~s~ 163 (206)
++++.+.
T Consensus 97 ~~i~~~~ 103 (125)
T 3cew_A 97 LCIQVKA 103 (125)
T ss_dssp EEEEEET
T ss_pred EEEEcCC
Confidence 8776443
No 59
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.40 E-value=1.3e-12 Score=98.21 Aligned_cols=78 Identities=19% Similarity=0.230 Sum_probs=60.8
Q ss_pred EEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEe-CCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEE
Q 041665 81 VSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFID-TTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISA 159 (206)
Q Consensus 81 i~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~-~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~ 159 (206)
+.+.++.++||+..++|+|+...|++||++|++++.+.+ + .+.|++||++++|+|.+|++.|.+++ +.++.+
T Consensus 43 ~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~~~~-----~~~l~~Gd~~~ip~g~~H~~~~~~~~--~~~l~~ 115 (134)
T 2o8q_A 43 AHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYEDIG-----AVMLEAGGSAFQPPGVRHRELRHSDD--LEVLEI 115 (134)
T ss_dssp EEEEEECC-----CCCEEECCSCEEEEEEESEEEEEETTTE-----EEEEETTCEEECCTTCCEEEEEECTT--CEEEEE
T ss_pred EEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEECCcE-----EEEecCCCEEEECCCCcEEeEeCCCC--eEEEEE
Confidence 356666677888889999987799999999999998865 4 89999999999999999999998765 477766
Q ss_pred ecCCCc
Q 041665 160 FGSASA 165 (206)
Q Consensus 160 ~~s~~p 165 (206)
+.....
T Consensus 116 ~~p~~~ 121 (134)
T 2o8q_A 116 VSPAGF 121 (134)
T ss_dssp ESSTTC
T ss_pred ECCCch
Confidence 665443
No 60
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.40 E-value=4.2e-13 Score=96.99 Aligned_cols=80 Identities=15% Similarity=0.183 Sum_probs=65.5
Q ss_pred CCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEE
Q 041665 78 GQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i 157 (206)
+..+.+.+++++||+..+||.|+...+++|+.+|++++.. .+|+.....+++||++++|+|..|+++|.|++ +++++
T Consensus 14 ~~~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~--~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~-~l~fi 90 (98)
T 2ozi_A 14 NDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA--PDGTRSLAQLKTGRSYARKAGVQHDVRNESTA-EIVFL 90 (98)
T ss_dssp SSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC--TTSCEECCCBCTTCCEEECTTCEEEEEECSSS-CEEEE
T ss_pred CCcEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEe--CCCcEEEEEECCCCEEEECCCCceeCEECCCC-CEEEE
Confidence 3468999999999999999999865566667788887753 34442357899999999999999999999999 99998
Q ss_pred EEe
Q 041665 158 SAF 160 (206)
Q Consensus 158 ~~~ 160 (206)
++-
T Consensus 91 ~vE 93 (98)
T 2ozi_A 91 EIE 93 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 863
No 61
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.39 E-value=7.8e-13 Score=105.49 Aligned_cols=78 Identities=17% Similarity=0.145 Sum_probs=67.0
Q ss_pred CCCeEEEEEEEecCCCcCC--CccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccE
Q 041665 77 NGQSVSTAILQFPAGAINP--PHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPA 154 (206)
Q Consensus 77 ~~~gi~~~~~~l~pg~~~~--~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a 154 (206)
.+..+.+.+++++||+..+ +|+|+. .|++||++|++++.+.++ .+.|++||+++||++.+|++.|.+++ ++
T Consensus 100 ~~~~~~~~~~~~~pg~~~~~~~H~h~~-~E~~~Vl~G~~~~~~~~~-----~~~l~~GD~i~i~~~~~H~~~n~~~~-~~ 172 (192)
T 1y9q_A 100 ADTGLEIFEITLLDHHQQMSSPHALGV-IEYIHVLEGIMKVFFDEQ-----WHELQQGEHIRFFSDQPHGYAAVTEK-AV 172 (192)
T ss_dssp TTTTEEEEEEEECTTCEEEECCCSTTC-EEEEEEEESCEEEEETTE-----EEEECTTCEEEEECSSSEEEEESSSC-EE
T ss_pred CCCcEEEEEEEECCCCCccCCCCCCCC-EEEEEEEEeEEEEEECCE-----EEEeCCCCEEEEcCCCCeEeECCCCC-cE
Confidence 3456899999999999765 788854 999999999999988655 89999999999999999999999998 88
Q ss_pred EEEEEecC
Q 041665 155 AAISAFGS 162 (206)
Q Consensus 155 ~~i~~~~s 162 (206)
+++++..
T Consensus 173 -~l~v~~~ 179 (192)
T 1y9q_A 173 -FQNIVAY 179 (192)
T ss_dssp -EEEEEEC
T ss_pred -EEEEEec
Confidence 7666543
No 62
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.39 E-value=8e-13 Score=104.23 Aligned_cols=75 Identities=20% Similarity=0.162 Sum_probs=65.4
Q ss_pred eEEEEEEEecC-CCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEE
Q 041665 80 SVSTAILQFPA-GAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 80 gi~~~~~~l~p-g~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~ 158 (206)
.+...+++++| |+...+|.|..++|++||++|++++.+.++ .+.|++||.+++|+|..|+++|.+++ +|+++.
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~g~-----~~~L~~Gds~~iP~g~~H~~~N~~d~-~Arll~ 160 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVCKN-----KFLSVKGSTFQIPAFNEYAIANRGND-EAKMFF 160 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTCEEEEEECSSS-CEEEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEECCE-----EEEEcCCCEEEECCCCCEEEEECCCC-CEEEEE
Confidence 36788899999 776665545567999999999999998766 89999999999999999999999999 999887
Q ss_pred Ee
Q 041665 159 AF 160 (206)
Q Consensus 159 ~~ 160 (206)
+.
T Consensus 161 Vq 162 (166)
T 2vpv_A 161 VQ 162 (166)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 63
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.38 E-value=1.5e-12 Score=95.13 Aligned_cols=75 Identities=24% Similarity=0.343 Sum_probs=65.2
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEE
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISA 159 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~ 159 (206)
++.+.+++++||...++|+|+ ..|++||++|++++.+.++ .+.+++||++++|+|.+|++.|.+ ++.++.+
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~---~~~~l~v 103 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHR-HSQVSYVVEGEFHVNVDGV-----IKVLTAGDSFFVPPHVDHGAVCPT---GGILIDT 103 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCS-SEEEEEEEEECEEEEETTE-----EEEECTTCEEEECTTCCEEEEESS---CEEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECC-cceEEEEEeeEEEEEECCE-----EEEeCCCCEEEECcCCceeeEeCC---CcEEEEE
Confidence 378899999999999999998 4999999999999988554 799999999999999999999976 4567777
Q ss_pred ecCC
Q 041665 160 FGSA 163 (206)
Q Consensus 160 ~~s~ 163 (206)
+...
T Consensus 104 ~~p~ 107 (116)
T 2pfw_A 104 FSPA 107 (116)
T ss_dssp EESC
T ss_pred ECCc
Confidence 7544
No 64
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.37 E-value=1.4e-12 Score=109.25 Aligned_cols=78 Identities=15% Similarity=0.130 Sum_probs=67.7
Q ss_pred CCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCC-CccEEE
Q 041665 78 GQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKA-NQPAAA 156 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~-~~~a~~ 156 (206)
+..+.+.+++++||+..++|+|+...|++||++|++++.++++ .+.|++||++++|++.+|+++|.++ + ++++
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~-----~~~l~~GD~i~~~~~~~H~~~n~g~~~-~~~~ 249 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNN-----WIPVKKGDYIFMGAYSLQAGYGVGRGE-AFSY 249 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESSSC-----EEEEETTCEEEECSSEEEEEEEC-----CEEE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCc-CEEE
Confidence 4568899999999999999999877999999999999998765 8999999999999999999999999 8 8888
Q ss_pred EEEec
Q 041665 157 ISAFG 161 (206)
Q Consensus 157 i~~~~ 161 (206)
+...+
T Consensus 250 l~~~d 254 (261)
T 1rc6_A 250 IYSKD 254 (261)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 77643
No 65
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.36 E-value=2.4e-12 Score=93.97 Aligned_cols=73 Identities=21% Similarity=0.376 Sum_probs=62.5
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~ 158 (206)
.++.+.++.++||...++|+|+. .|++||++|++++.+.++ .+.+++||++++|+|.+|++.|.++ +.+++
T Consensus 38 ~~~~~~~~~~~~g~~~~~H~H~~-~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~---~~~~~ 108 (115)
T 1yhf_A 38 QDLGITVFSLDKGQEIGRHSSPG-DAMVTILSGLAEITIDQE-----TYRVAEGQTIVMPAGIPHALYAVEA---FQMLL 108 (115)
T ss_dssp TTEEEEEEEECTTCEEEEECCSS-EEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTSCEEEEESSC---EEEEE
T ss_pred CceEEEEEEECCCCccCCEECCC-cEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCCEEEEECCC---ceEEE
Confidence 35688999999999999999985 999999999999987554 7999999999999999999999863 44444
Q ss_pred Ee
Q 041665 159 AF 160 (206)
Q Consensus 159 ~~ 160 (206)
++
T Consensus 109 v~ 110 (115)
T 1yhf_A 109 VV 110 (115)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 66
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.35 E-value=1.5e-12 Score=108.10 Aligned_cols=79 Identities=16% Similarity=0.235 Sum_probs=70.2
Q ss_pred eEEEEEEEecC-CCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEE
Q 041665 80 SVSTAILQFPA-GAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 80 gi~~~~~~l~p-g~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~ 158 (206)
.+.+..++++| |+..++|||+. .|++||++|++++.++++ .+.|++||++++|+|.+|+++|.+++ +++++.
T Consensus 144 ~~~~~~~~~~p~g~~~~~H~H~~-~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~~~~H~~~n~~~~-~~~~l~ 216 (243)
T 3h7j_A 144 WVEIMLAKIPGNGGEMPFHKHRN-EQIGICIGGGYDMTVEGC-----TVEMKFGTAYFCEPREDHGAINRSEK-ESKSIN 216 (243)
T ss_dssp TEEEEEEEECTTTEEEEEECCSS-EEEEEECSSCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECSSS-CEEEEE
T ss_pred eeEEEEEEECCCCCcCCCEeCCC-cEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCcEEeEeCCCC-CEEEEE
Confidence 35778888999 88889999986 999999999999988665 78999999999999999999999999 999999
Q ss_pred EecCCCc
Q 041665 159 AFGSASA 165 (206)
Q Consensus 159 ~~~s~~p 165 (206)
++.....
T Consensus 217 v~~p~~~ 223 (243)
T 3h7j_A 217 IFFPPRY 223 (243)
T ss_dssp EEESCSS
T ss_pred EEcCChh
Confidence 9875443
No 67
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.34 E-value=5.6e-12 Score=92.14 Aligned_cols=72 Identities=15% Similarity=0.203 Sum_probs=61.5
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEE
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISA 159 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~ 159 (206)
.+.+..+.++||...++|+|+. .|++||++|++++.+.++ .+.|++||++++|+|.+|.+.|. + ++.++++
T Consensus 37 ~~~~~~~~~~~g~~~~~H~h~~-~e~~~vl~G~~~~~i~~~-----~~~l~~Gd~i~i~~~~~H~~~~~--~-~~~~~~i 107 (114)
T 2ozj_A 37 RVQISLFSFADGESVSEEEYFG-DTLYLILQGEAVITFDDQ-----KIDLVPEDVLMVPAHKIHAIAGK--G-RFKMLQI 107 (114)
T ss_dssp SEEEEEEEEETTSSCCCBCCSS-CEEEEEEEEEEEEEETTE-----EEEECTTCEEEECTTCCBEEEEE--E-EEEEEEE
T ss_pred CceEEEEEECCCCccccEECCC-CeEEEEEeCEEEEEECCE-----EEEecCCCEEEECCCCcEEEEeC--C-CcEEEEE
Confidence 3567778889999999999976 999999999999988655 89999999999999999999996 4 5565555
Q ss_pred e
Q 041665 160 F 160 (206)
Q Consensus 160 ~ 160 (206)
.
T Consensus 108 ~ 108 (114)
T 2ozj_A 108 T 108 (114)
T ss_dssp E
T ss_pred E
Confidence 4
No 68
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.31 E-value=1.5e-11 Score=103.71 Aligned_cols=76 Identities=17% Similarity=0.205 Sum_probs=68.2
Q ss_pred CCeEEEEEEEecCCCcCCC-ccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCC-CccEE
Q 041665 78 GQSVSTAILQFPAGAINPP-HTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKA-NQPAA 155 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~~~~-H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~-~~~a~ 155 (206)
+..+.+.+++++||+..++ |+|+. .|++||++|++++.++++ .+.|++||+++||++.+|+++|.++ + +++
T Consensus 179 ~~~~~~~~~~l~pg~~~~~~H~H~~-~E~~yVl~G~~~~~i~~~-----~~~l~~GD~i~i~~~~~H~~~n~~~~~-~~~ 251 (274)
T 1sef_A 179 DFDMNMHILSFEPGASHAYIETHVQ-EHGAYLISGQGMYNLDNE-----WYPVEKGDYIFMSAYVPQAAYAVGREE-PLM 251 (274)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCSC-CEEEEEEECEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEECSSS-CEE
T ss_pred CCCEEEEEEEECCCCccCcceeccC-eEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeCCCCC-CEE
Confidence 3578899999999999888 99965 999999999999998665 8999999999999999999999998 7 888
Q ss_pred EEEEe
Q 041665 156 AISAF 160 (206)
Q Consensus 156 ~i~~~ 160 (206)
+++..
T Consensus 252 ~l~~~ 256 (274)
T 1sef_A 252 YVYSK 256 (274)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77764
No 69
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.30 E-value=1.7e-11 Score=91.42 Aligned_cols=74 Identities=16% Similarity=0.167 Sum_probs=61.8
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~ 158 (206)
..+++..++++||...++|. ..+|++||++|++++.++++ .+.|++||+++||+|..|++.|.+ + +++++.
T Consensus 38 ~~~~~~~~~~~pG~~~~~H~--~~~E~~~Vl~G~~~~~~~g~-----~~~l~~GD~v~ip~g~~H~~~~~~-~-~~~~l~ 108 (119)
T 3lwc_A 38 GPITIGYGRYAPGQSLTETM--AVDDVMIVLEGRLSVSTDGE-----TVTAGPGEIVYMPKGETVTIRSHE-E-GALTAY 108 (119)
T ss_dssp CCCEEEEEEECTTCEEEEEC--SSEEEEEEEEEEEEEEETTE-----EEEECTTCEEEECTTCEEEEEEEE-E-EEEEEE
T ss_pred CCEEEEEEEECCCCCcCccC--CCCEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCEEEEEcCC-C-CeEEEE
Confidence 45788899999998776664 56999999999999998443 799999999999999999999975 5 677766
Q ss_pred Eec
Q 041665 159 AFG 161 (206)
Q Consensus 159 ~~~ 161 (206)
+..
T Consensus 109 v~~ 111 (119)
T 3lwc_A 109 VTY 111 (119)
T ss_dssp EEE
T ss_pred EEC
Confidence 654
No 70
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.29 E-value=6.8e-12 Score=90.43 Aligned_cols=75 Identities=21% Similarity=0.213 Sum_probs=62.8
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEE-EEEEeeEEEEEEE-eCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAEL-LFVVSGILEVGFI-DTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAA 156 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~-~yVl~G~~~~~~~-~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~ 156 (206)
.++.+.++.++||...++|+|+...|+ +||++|++++.+. ++ .+.|++||++++|+|..|++.|.++. .+
T Consensus 31 ~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~~---~~ 102 (110)
T 2q30_A 31 ENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDGDA-----VIPAPRGAVLVAPISTPHGVRAVTDM---KV 102 (110)
T ss_dssp SSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGGGC-----EEEECTTEEEEEETTSCEEEEESSSE---EE
T ss_pred CCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCCCE-----EEEECCCCEEEeCCCCcEEEEEcCCc---EE
Confidence 456888999999999999999754687 8999999999876 34 79999999999999999999997644 45
Q ss_pred EEEec
Q 041665 157 ISAFG 161 (206)
Q Consensus 157 i~~~~ 161 (206)
+.++.
T Consensus 103 l~~~~ 107 (110)
T 2q30_A 103 LVTIA 107 (110)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 55553
No 71
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.26 E-value=4.2e-11 Score=99.66 Aligned_cols=77 Identities=13% Similarity=0.063 Sum_probs=68.3
Q ss_pred CCeEEEEEEEecCCCcCCC-ccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEE
Q 041665 78 GQSVSTAILQFPAGAINPP-HTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAA 156 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~~~~-H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~ 156 (206)
+..+.+.+++++||+..+. |.|. .+|.+||++|++++.++++ .+.|++||+++++++.+|+++|.|++ ++++
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h~-~ee~~~vLeG~~~~~~~~~-----~~~l~~GD~~~~~~~~pH~~~n~g~~-~~~y 234 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVHY-MEHGLLMLEGEGLYKLEEN-----YYPVTAGDIIWMGAHCPQWYGALGRN-WSKY 234 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCS-SCEEEEEEECEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEESSS-CEEE
T ss_pred CCCeEEEEEEECCCCccCcccCCC-ceEEEEEEECEEEEEECCE-----EEEcCCCCEEEECCCCCEEEEcCCCC-CEEE
Confidence 5678999999999999886 5564 5999999999999988665 89999999999999999999999999 9988
Q ss_pred EEEec
Q 041665 157 ISAFG 161 (206)
Q Consensus 157 i~~~~ 161 (206)
+..-+
T Consensus 235 l~~kd 239 (246)
T 1sfn_A 235 LLYKD 239 (246)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87653
No 72
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.24 E-value=5.1e-11 Score=104.07 Aligned_cols=81 Identities=14% Similarity=0.132 Sum_probs=65.1
Q ss_pred eEEEEEEEecCCCc-CC--CccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEE
Q 041665 80 SVSTAILQFPAGAI-NP--PHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAA 156 (206)
Q Consensus 80 gi~~~~~~l~pg~~-~~--~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~ 156 (206)
.+.+. ..+.|++. .+ +|+|++..|++||++|++++.+.+.+|+...+.|++||++++|+|.+|+++|.+++ + ++
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~-~-~~ 123 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPD-T-EM 123 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTT-E-EE
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCC-C-EE
Confidence 35666 44555554 45 89998779999999999999998844544489999999999999999999999888 6 77
Q ss_pred EEEecCC
Q 041665 157 ISAFGSA 163 (206)
Q Consensus 157 i~~~~s~ 163 (206)
+.++...
T Consensus 124 l~v~~p~ 130 (350)
T 1juh_A 124 TGVIVPG 130 (350)
T ss_dssp EEEEESS
T ss_pred EEEEcCc
Confidence 7776543
No 73
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.24 E-value=2.3e-11 Score=104.45 Aligned_cols=78 Identities=22% Similarity=0.206 Sum_probs=68.1
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~ 158 (206)
..+.+.++++.||+..++|||+...|++||++|++++.+.++ .+.|++||++++|+|.+|.+.|.++ +++++.
T Consensus 44 ~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~~-----~~~l~~Gd~~~~p~~~~H~~~n~~~--~~~~~~ 116 (337)
T 1y3t_A 44 DLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLDGE-----RYLLISGDYANIPAGTPHSYRMQSH--RTRLVS 116 (337)
T ss_dssp SSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECST--TEEEEE
T ss_pred CeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCcEEEEECCC--CeEEEE
Confidence 468999999999999999999857999999999999997544 7999999999999999999999875 477777
Q ss_pred EecCC
Q 041665 159 AFGSA 163 (206)
Q Consensus 159 ~~~s~ 163 (206)
+++..
T Consensus 117 ~~~p~ 121 (337)
T 1y3t_A 117 YTMKG 121 (337)
T ss_dssp EEETT
T ss_pred EECCC
Confidence 76554
No 74
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.24 E-value=1.2e-11 Score=89.51 Aligned_cols=68 Identities=31% Similarity=0.377 Sum_probs=54.6
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEe-CCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFID-TTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISA 159 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~-~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~ 159 (206)
..++.+.||. .++|+|+...|++||++|++++.+.+ + .+.+++||++++|+|.+|++.|. + ++.++.+
T Consensus 30 ~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~--~-~~~~l~i 98 (107)
T 2i45_A 30 QFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDFADGG-----SMTIREGEMAVVPKSVSHRPRSE--N-GCSLVLI 98 (107)
T ss_dssp EEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEETTSC-----EEEECTTEEEEECTTCCEEEEEE--E-EEEEEEE
T ss_pred EEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEECCCc-----EEEECCCCEEEECCCCcEeeEeC--C-CeEEEEE
Confidence 3445667776 46999986699999999999998866 4 79999999999999999999994 4 5666554
No 75
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.23 E-value=1.5e-11 Score=104.27 Aligned_cols=77 Identities=18% Similarity=0.226 Sum_probs=68.2
Q ss_pred CCeEEEEEEEecCCCcC--CCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEE
Q 041665 78 GQSVSTAILQFPAGAIN--PPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAA 155 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~~--~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~ 155 (206)
+..+.+.+++++||+.. ++|.|+ .+|++||++|++++.+.++ ++.|++||.++||+|.+|+++|.+++ +++
T Consensus 65 ~~~~~~~~~~l~PG~~~~~~~h~H~-~eE~~~Vl~G~l~v~v~g~-----~~~L~~GD~i~ip~~~~H~~~N~g~~-~~~ 137 (278)
T 1sq4_A 65 AETFSQYIVELAPNGGSDKPEQDPN-AEAVLFVVEGELSLTLQGQ-----VHAMQPGGYAFIPPGADYKVRNTTGQ-HTR 137 (278)
T ss_dssp CCSCEEEEEEEEEEEEESSCCCCTT-EEEEEEEEESCEEEEESSC-----EEEECTTEEEEECTTCCEEEECCSSS-CEE
T ss_pred CCcEEEEEEEECCCCccCCCCcCCC-ceEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCcEEEEECCCC-CEE
Confidence 34679999999999876 567786 5999999999999998766 89999999999999999999999999 999
Q ss_pred EEEEec
Q 041665 156 AISAFG 161 (206)
Q Consensus 156 ~i~~~~ 161 (206)
++++..
T Consensus 138 ~l~v~~ 143 (278)
T 1sq4_A 138 FHWIRK 143 (278)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 888763
No 76
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.23 E-value=1.7e-11 Score=101.74 Aligned_cols=72 Identities=22% Similarity=0.213 Sum_probs=64.7
Q ss_pred EEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEE-ECCCCeEEEEeCCCCccEEEEEEe
Q 041665 82 STAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFV-FPKGLVHYQYNSKANQPAAAISAF 160 (206)
Q Consensus 82 ~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~-~P~g~~H~~~N~g~~~~a~~i~~~ 160 (206)
.+..+.++||...++|||+. .|++||++|++++.+.++ .+.|++||.++ +|+|.+|+++|.+++ +++++.+.
T Consensus 35 ~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~~~~~-----~~~l~~Gd~i~~ip~~~~H~~~n~~~~-~~~~l~i~ 107 (243)
T 3h7j_A 35 EVLMSYVPPHTNVEPHQHKE-VQIGMVVSGELMMTVGDV-----TRKMTALESAYIAPPHVPHGARNDTDQ-EVIAIDIK 107 (243)
T ss_dssp EEEEEEECTTEEEEEECCSS-EEEEEEEESEEEEEETTE-----EEEEETTTCEEEECTTCCEEEEECSSS-CEEEEEEE
T ss_pred EEEEEEECCCCccCCEECCC-cEEEEEEEeEEEEEECCE-----EEEECCCCEEEEcCCCCcEeeEeCCCC-cEEEEEEe
Confidence 56677799999999999985 999999999999998554 79999999996 999999999999999 89988775
No 77
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.23 E-value=1.5e-11 Score=103.01 Aligned_cols=77 Identities=17% Similarity=0.143 Sum_probs=66.8
Q ss_pred CeEEEEEEEecCCCcCCCccC-CCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTH-PRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H-~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i 157 (206)
..+.+.+++++||+....|.| +..+|++||++|++++.+.++ ++.|++||.++||++.+|+++|.+++ +++++
T Consensus 57 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~~-----~~~L~~Gd~~~~~~~~~H~~~N~~~~-~~~~l 130 (261)
T 1rc6_A 57 ASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGK-----TFALSEGGYLYCPPGSLMTFVNAQAE-DSQIF 130 (261)
T ss_dssp CSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEETTE-----EEEEETTEEEEECTTCCCEEEECSSS-CEEEE
T ss_pred CcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeCCCC-CEEEE
Confidence 457889999999997765544 456899999999999998655 89999999999999999999999999 99998
Q ss_pred EEec
Q 041665 158 SAFG 161 (206)
Q Consensus 158 ~~~~ 161 (206)
++..
T Consensus 131 ~v~~ 134 (261)
T 1rc6_A 131 LYKR 134 (261)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8864
No 78
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.22 E-value=3.7e-11 Score=88.36 Aligned_cols=75 Identities=19% Similarity=0.278 Sum_probs=57.6
Q ss_pred eEEEEEEEecCCCcCCC---ccCCCCcEEEEEEeeEEEEEEEeCCCcEEE--EEEcCCCEEEECCCCeEEEEeCCCCccE
Q 041665 80 SVSTAILQFPAGAINPP---HTHPRSAELLFVVSGILEVGFIDTTNKLYT--QTLQIGDMFVFPKGLVHYQYNSKANQPA 154 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~---H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~--~~L~~GD~~~~P~g~~H~~~N~g~~~~a 154 (206)
++.+.++. .+|...++ |.| ...|++||++|++++.+.++ . +.|++||.++||+|..|++.|.++++++
T Consensus 30 ~~~i~~i~-~~g~~~~~~~~~~~-~~~E~~~Vl~G~~~l~~~~~-----~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~ 102 (112)
T 2opk_A 30 GLKIERII-SNGQASPPGFWYDS-PQDEWVMVVSGSAGIECEGD-----TAPRVMRPGDWLHVPAHCRHRVAWTDGGEPT 102 (112)
T ss_dssp TEEEEEEE-ESSCCCCTTCCBCC-SSEEEEEEEESCEEEEETTC-----SSCEEECTTEEEEECTTCCEEEEEECSSSCE
T ss_pred CEEEEEEE-eCCccCCCCccccC-CccEEEEEEeCeEEEEECCE-----EEEEEECCCCEEEECCCCcEEEEeCCCCCCE
Confidence 45666664 45555444 545 45999999999999998765 5 8999999999999999999999875256
Q ss_pred EEEEEec
Q 041665 155 AAISAFG 161 (206)
Q Consensus 155 ~~i~~~~ 161 (206)
++++++.
T Consensus 103 ~~l~v~~ 109 (112)
T 2opk_A 103 VWLAVHC 109 (112)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5666654
No 79
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.22 E-value=1.9e-11 Score=92.92 Aligned_cols=71 Identities=18% Similarity=0.136 Sum_probs=59.4
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEE
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISA 159 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~ 159 (206)
.+.+..++++|| .+|||...+|++||++|++++.+.++ .+.|++||+++||+|..|.+.| ++ +++++.+
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~~g~-----~~~l~~GD~i~~p~g~~h~~~~--~~-~~~~l~v 124 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRHEGE-----TMIAKAGDVMFIPKGSSIEFGT--PT-SVRFLYV 124 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCEEEEEE--EE-EEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEECCE-----EEEECCCcEEEECCCCEEEEEe--CC-CEEEEEE
Confidence 568888999999 35666557999999999999987644 7899999999999999999997 35 6777776
Q ss_pred ec
Q 041665 160 FG 161 (206)
Q Consensus 160 ~~ 161 (206)
..
T Consensus 125 ~~ 126 (133)
T 2pyt_A 125 AW 126 (133)
T ss_dssp EE
T ss_pred Ec
Confidence 64
No 80
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.20 E-value=5.8e-11 Score=100.14 Aligned_cols=103 Identities=12% Similarity=0.089 Sum_probs=77.5
Q ss_pred CCcCCCCceEeccccccCCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEE
Q 041665 39 DAIDGNFFTFTGMRSIIEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFI 118 (206)
Q Consensus 39 ~~~~~~dF~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~ 118 (206)
+-+++++++.+.+. .-.+..++.+-.... +..+.+.+++++||+..+.|.| ..+|++||++|++++.+.
T Consensus 38 avI~~~~iv~s~lP------g~~~~~~~vL~sP~~----G~~f~~~lv~l~PGg~s~~~~h-~~EEfiyVleG~l~l~l~ 106 (266)
T 4e2q_A 38 ALITPESHVYSPLP------DWTNTLGAYLITPAT----GSHFVMYLAKMKEMSSSGLPPQ-DIERLIFVVEGAVTLTNT 106 (266)
T ss_dssp EEECGGGCCCEECT------TSSSEEEEEEECGGG----TCSSEEEEEEECSSEECCCCCT-TEEEEEEEEEECEEEEC-
T ss_pred EEECccceEEeeCC------CCcCEEEEEEcCCCC----CCcEEEEEEEECcCCcCCCCCC-CCeEEEEEEEEEEEEEEC
Confidence 44455555555431 112455555544333 2467899999999999888877 469999999999999987
Q ss_pred -eCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEe
Q 041665 119 -DTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAF 160 (206)
Q Consensus 119 -~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~ 160 (206)
++ ++.|++||.+++|++..|+++|. + +|+++++.
T Consensus 107 ~g~-----~~~L~~Gds~y~p~~~~H~~~N~--~-~Ar~l~V~ 141 (266)
T 4e2q_A 107 SSS-----SKKLTVDSYAYLPPNFHHSLDCV--E-SATLVVFE 141 (266)
T ss_dssp -CC-----CEEECTTEEEEECTTCCCEEEES--S-CEEEEEEE
T ss_pred CCc-----EEEEcCCCEEEECCCCCEEEEeC--C-CEEEEEEE
Confidence 66 79999999999999999999994 6 78888874
No 81
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.20 E-value=2.6e-11 Score=86.15 Aligned_cols=63 Identities=29% Similarity=0.478 Sum_probs=52.2
Q ss_pred CCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCC
Q 041665 78 GQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSK 149 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g 149 (206)
+..+.+.++. +..++|+|+...|++||++|++++.+.++ .+.+++||++++|+|..|++.|.+
T Consensus 30 ~~~~~~~~~~----~~~~~H~H~~~~e~~~v~~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~ 92 (102)
T 3d82_A 30 DYQFKLVKVE----GEFVWHEHADTDEVFIVMEGTLQIAFRDQ-----NITLQAGEMYVIPKGVEHKPMAKE 92 (102)
T ss_dssp TEEEEEEEEE----EECCCBCCTTCCEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTCCBEEEEEE
T ss_pred CCEEEEEEEC----CCCCceeCCCCcEEEEEEeCEEEEEECCE-----EEEEcCCCEEEECCCCeEeeEcCC
Confidence 3344444443 45799999877999999999999987665 899999999999999999999974
No 82
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.19 E-value=2.8e-11 Score=102.11 Aligned_cols=77 Identities=18% Similarity=0.205 Sum_probs=66.8
Q ss_pred CCeEEEEEEEecCCCcCCCcc-CCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEE
Q 041665 78 GQSVSTAILQFPAGAINPPHT-HPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAA 156 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~~~~H~-H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~ 156 (206)
+..+.+.+++++||+....|. |+..+|++||++|++++.+.++ ++.|++||.++||++.+|+++|.+++ ++++
T Consensus 59 ~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~~-----~~~L~~GD~~~~~~~~~H~~~N~~~~-~~~~ 132 (274)
T 1sef_A 59 GATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDGQE-----THELEAGGYAYFTPEMKMYLANAQEA-DTEV 132 (274)
T ss_dssp TCSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTSCCEEEESSSS-CEEE
T ss_pred CCcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeCCCC-CEEE
Confidence 345788999999998775544 4566899999999999998765 89999999999999999999999999 9998
Q ss_pred EEEe
Q 041665 157 ISAF 160 (206)
Q Consensus 157 i~~~ 160 (206)
+++.
T Consensus 133 l~v~ 136 (274)
T 1sef_A 133 FLYK 136 (274)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8876
No 83
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.18 E-value=6.4e-11 Score=97.30 Aligned_cols=73 Identities=18% Similarity=0.222 Sum_probs=63.1
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEE
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISA 159 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~ 159 (206)
.+.+..+.++||...++|+|+. .|++||++|++++.++++ .+.+++||.+++|+|.+|++.|. .+ ++.++.+
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i~g~-----~~~l~~Gd~i~ip~~~~H~~~~~-~~-~~~~ll~ 223 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAPG-DALVTVLDGEGKYYVDGK-----PFIVKKGESAVLPANIPHAVEAE-TE-NFKMLLI 223 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCSS-EEEEEEEEEEEEEEETTE-----EEEEETTEEEEECTTSCEEEECC-SS-CEEEEEE
T ss_pred CeEEEEEEECCCCccCCEECCC-cEEEEEEeEEEEEEECCE-----EEEECCCCEEEECCCCcEEEEeC-CC-CEEEEEE
Confidence 4688999999999999999985 999999999999998655 89999999999999999999993 34 5666554
Q ss_pred e
Q 041665 160 F 160 (206)
Q Consensus 160 ~ 160 (206)
+
T Consensus 224 ~ 224 (227)
T 3rns_A 224 L 224 (227)
T ss_dssp E
T ss_pred E
Confidence 3
No 84
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.18 E-value=1.4e-10 Score=101.59 Aligned_cols=89 Identities=13% Similarity=0.097 Sum_probs=73.4
Q ss_pred CceEEEEee-ccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECC
Q 041665 61 PIFRVSKAS-MAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPK 139 (206)
Q Consensus 61 ~g~~v~~~~-~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~ 139 (206)
.|+.+..++ .+.++..++. .+....++||+..++|||+. .|+.||++|++++.++++ ++.+++||++++|+
T Consensus 249 ~G~~~~~~np~t~~~~~~ti--~~~~~~l~pG~~~~~H~h~~-~ev~~v~~G~g~~~v~~~-----~~~~~~GD~~~vP~ 320 (354)
T 2d40_A 249 DGYKMRYVNPVTGGYPMPSM--GAFLQLLPKGFASRVARTTD-STIYHVVEGSGQVIIGNE-----TFSFSAKDIFVVPT 320 (354)
T ss_dssp TBEEEEECCTTTSSCSSSSC--EEEEEEECTTCBCCCBEESS-CEEEEEEEEEEEEEETTE-----EEEEETTCEEEECT
T ss_pred CCeEEEEeCCCcCCCCCCcc--eeEEEEECCCCCCCceecCC-cEEEEEEeCeEEEEECCE-----EEEEcCCCEEEECC
Confidence 466777777 3466666665 45566899999999999987 599999999999998543 89999999999999
Q ss_pred CCeEEEEeCCCCccEEEEEEe
Q 041665 140 GLVHYQYNSKANQPAAAISAF 160 (206)
Q Consensus 140 g~~H~~~N~g~~~~a~~i~~~ 160 (206)
+..|++.|. + +++++++.
T Consensus 321 ~~~H~~~n~--e-~~~l~~~~ 338 (354)
T 2d40_A 321 WHGVSFQTT--Q-DSVLFSFS 338 (354)
T ss_dssp TCCEEEEEE--E-EEEEEEEE
T ss_pred CCeEEEEeC--C-CEEEEEEc
Confidence 999999993 6 78888763
No 85
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.17 E-value=2.6e-11 Score=106.16 Aligned_cols=76 Identities=18% Similarity=0.317 Sum_probs=66.9
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEE-EEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEV-GFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~-~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i 157 (206)
..+.+....++||+..++|+|+. .|++||++|++++ .++++ .+.+++||++++|+|.+|.+.|.+++ +++++
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~~-~e~~yVl~G~g~~t~v~g~-----~~~l~~GD~~~iP~g~~H~~~n~~~~-~~~~l 170 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHNQ-SALRFIVEGKGAFTAVDGE-----RTPMNEGDFILTPQWRWHDHGNPGDE-PVIWL 170 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEESS-CEEEEEEECSSCEEEETTE-----EEECCTTCEEEECTTSCEEEECCSSS-CEEEE
T ss_pred CcEEEEEEEECCCCCcCCeecCc-ceEEEEEEEEEEEEEECCE-----EEEEcCCCEEEECCCCcEEeEeCCCC-CEEEE
Confidence 35789999999999999999975 8999999999988 44333 79999999999999999999999999 99988
Q ss_pred EEec
Q 041665 158 SAFG 161 (206)
Q Consensus 158 ~~~~ 161 (206)
.+.+
T Consensus 171 ~v~d 174 (354)
T 2d40_A 171 DGLD 174 (354)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8764
No 86
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.15 E-value=8.9e-11 Score=95.77 Aligned_cols=78 Identities=21% Similarity=0.172 Sum_probs=67.7
Q ss_pred CCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEE
Q 041665 77 NGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAA 156 (206)
Q Consensus 77 ~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~ 156 (206)
....+.+..+.++||...|+|.|+. +|+.||++|++++.+.+. + .+.+++||++++|+|++|.+++ +++ ++..
T Consensus 128 ~s~~l~lG~v~l~PG~~yP~HsHp~-EEiy~VLsG~~e~~v~~g--~--~~~l~pGd~v~ipsgv~Ha~rt-~de-Plla 200 (217)
T 4b29_A 128 LTQSLRVTVGYWGPGLDYGWHEHLP-EELYSVVSGRALFHLRNA--P--DLMLEPGQTRFHPANAPHAMTT-LTD-PILT 200 (217)
T ss_dssp ECSSCEEEEEEECSSCEEEEEECSS-EEEEEEEEECEEEEETTS--C--CEEECTTCEEEECTTCCEEEEC-CSS-CEEE
T ss_pred CCCeEEEEEEEECCCCcCCCCCCCC-ceEEEEEeCCEEEEECCC--C--EEecCCCCEEEcCCCCceeEEE-CCc-cEEE
Confidence 3456789999999999999999985 999999999999988632 2 7899999999999999999985 778 8987
Q ss_pred EEEec
Q 041665 157 ISAFG 161 (206)
Q Consensus 157 i~~~~ 161 (206)
+.+..
T Consensus 201 lwvW~ 205 (217)
T 4b29_A 201 LVLWR 205 (217)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77764
No 87
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.13 E-value=1.8e-10 Score=94.54 Aligned_cols=73 Identities=8% Similarity=0.029 Sum_probs=65.0
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEE
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISA 159 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~ 159 (206)
+..+.++.+.||...+.|.|+. +|++||++|++++.+.++ ++.|++||.+++|+|.+|.++|. + +++++.+
T Consensus 36 ~~~~~~~~~~~G~~~~~h~h~~-~~~~~Vl~G~~~~~i~~~-----~~~l~~Gd~~~~p~~~~H~~~a~--~-~~~~l~i 106 (227)
T 3rns_A 36 NSYISLFSLAKDEEITAEAMLG-NRYYYCFNGNGEIFIENN-----KKTISNGDFLEITANHNYSIEAR--D-NLKLIEI 106 (227)
T ss_dssp SEEEEEEEECTTCEEEECSCSS-CEEEEEEESEEEEEESSC-----EEEEETTEEEEECSSCCEEEEES--S-SEEEEEE
T ss_pred CcEEEEEEECCCCccCccccCC-CEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCCEEEEEC--C-CcEEEEE
Confidence 4688999999999999999986 999999999999998766 89999999999999999999986 4 5777776
Q ss_pred ec
Q 041665 160 FG 161 (206)
Q Consensus 160 ~~ 161 (206)
..
T Consensus 107 ~~ 108 (227)
T 3rns_A 107 GE 108 (227)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 88
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.13 E-value=1.7e-10 Score=89.62 Aligned_cols=73 Identities=15% Similarity=0.153 Sum_probs=58.1
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEE
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISA 159 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~ 159 (206)
.+++..+++. ++. .|||...+|+.||++|++++.+.++ ++.|++||+++||+|..|++.|. + +++++.+
T Consensus 65 ~~s~g~~~~e-~~~--~~~~~~~eE~~yVLeG~~~l~i~g~-----~~~l~~GD~i~iP~G~~h~~~n~--~-~a~~l~V 133 (151)
T 4axo_A 65 RLGCGMMEMK-ETT--FDWTLNYDEIDYVIDGTLDIIIDGR-----KVSASSGELIFIPKGSKIQFSVP--D-YARFIYV 133 (151)
T ss_dssp SCEEEEEEEE-EEE--EEEECSSEEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCEEEEEEE--E-EEEEEEE
T ss_pred cEEEEEEEEc-Ccc--ccEeCCCcEEEEEEEeEEEEEECCE-----EEEEcCCCEEEECCCCEEEEEeC--C-CEEEEEE
Confidence 4577777776 443 4566667999999999999997443 89999999999999999999997 5 6777777
Q ss_pred ecCC
Q 041665 160 FGSA 163 (206)
Q Consensus 160 ~~s~ 163 (206)
....
T Consensus 134 ~~P~ 137 (151)
T 4axo_A 134 TYPA 137 (151)
T ss_dssp EECS
T ss_pred ECCC
Confidence 6543
No 89
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.13 E-value=2.1e-10 Score=97.17 Aligned_cols=84 Identities=14% Similarity=0.094 Sum_probs=72.5
Q ss_pred ccCCCCCCeEEEEEEEecCCCcCCC-ccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCC
Q 041665 72 EFPALNGQSVSTAILQFPAGAINPP-HTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKA 150 (206)
Q Consensus 72 ~~P~l~~~gi~~~~~~l~pg~~~~~-H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~ 150 (206)
-.|.-....+.+.+++++||+..+. |.| ..+|.+||++|++++.++++ .+.|++||+++++.+..|+++|.|+
T Consensus 182 l~p~~~~~~~~~~~~~l~pG~~i~~~~~h-~~e~~~~il~G~~~~~~~~~-----~~~v~~GD~~~~~~~~~h~~~n~g~ 255 (278)
T 1sq4_A 182 VDMSDMRHDMHVNIVNFEPGGVIPFAETH-VMEHGLYVLEGKAVYRLNQD-----WVEVEAGDFMWLRAFCPQACYSGGP 255 (278)
T ss_dssp SCTTCTTCSEEEEEEEECSSSEESCCCCC-SEEEEEEEEECEEEEEETTE-----EEEEETTCEEEEEESCCEEEECCSS
T ss_pred ecCCCcCCCeEEEEEEECCCCCcCCCCCC-CccEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCCEEEEcCCC
Confidence 3454456689999999999999987 555 45899999999999987665 8999999999999999999999999
Q ss_pred CccEEEEEEecC
Q 041665 151 NQPAAAISAFGS 162 (206)
Q Consensus 151 ~~~a~~i~~~~s 162 (206)
+ +++++.+.+-
T Consensus 256 ~-~~~yl~~~d~ 266 (278)
T 1sq4_A 256 G-RFRYLLYKDV 266 (278)
T ss_dssp S-CEEEEEEEEC
T ss_pred C-CEEEEEEEEc
Confidence 9 9999988754
No 90
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.12 E-value=3.9e-10 Score=96.71 Aligned_cols=75 Identities=15% Similarity=0.138 Sum_probs=61.6
Q ss_pred EEEEEecC-CCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEec
Q 041665 83 TAILQFPA-GAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFG 161 (206)
Q Consensus 83 ~~~~~l~p-g~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~ 161 (206)
...+.+.| |...++|||+...|++||++|++++.+.++ .+.|++||++++|++.+|++.|.++ ++.++.+++
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i~~~-----~~~l~~GD~~~ip~~~~H~~~n~~~--~~~~l~v~~ 291 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWTDGQ-----EIQLNPGDFLHVPANTVHSYRLDSH--YTKMVGVLV 291 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECSS--SEEEEEEEE
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCeEEEEECCC--CeEEEEEEc
Confidence 34445555 567789999866999999999999998654 8999999999999999999999875 577887775
Q ss_pred CCC
Q 041665 162 SAS 164 (206)
Q Consensus 162 s~~ 164 (206)
...
T Consensus 292 ~~~ 294 (337)
T 1y3t_A 292 PGL 294 (337)
T ss_dssp SST
T ss_pred Ccc
Confidence 443
No 91
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.12 E-value=1.8e-10 Score=89.88 Aligned_cols=71 Identities=17% Similarity=0.133 Sum_probs=58.0
Q ss_pred EEEEEEEecCCCcCCCccCCCCcEEEEEEe--eEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEE
Q 041665 81 VSTAILQFPAGAINPPHTHPRSAELLFVVS--GILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 81 i~~~~~~l~pg~~~~~H~H~~a~E~~yVl~--G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~ 158 (206)
+++..+++ +...++|||+...|++||++ |++++.++++ .+.|++||+++||+|..|++. . ++++++
T Consensus 47 ~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~idge-----~~~l~~GD~v~IPpg~~H~i~----g-~l~~L~ 114 (157)
T 4h7l_A 47 VSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIELNGQ-----SYPLTKLLAISIPPLVRHRIV----G-EATIIN 114 (157)
T ss_dssp CEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEETTE-----EEECCTTEEEEECTTCCEEEE----S-CEEEEE
T ss_pred EEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEECCE-----EEEeCCCCEEEECCCCeEeeE----C-CEEEEE
Confidence 45565555 44568999988789999999 9999998655 899999999999999999997 2 477887
Q ss_pred EecCC
Q 041665 159 AFGSA 163 (206)
Q Consensus 159 ~~~s~ 163 (206)
+++..
T Consensus 115 I~~Pp 119 (157)
T 4h7l_A 115 IVSPP 119 (157)
T ss_dssp EEESS
T ss_pred EECCC
Confidence 76544
No 92
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=99.09 E-value=1.7e-09 Score=86.96 Aligned_cols=80 Identities=20% Similarity=0.278 Sum_probs=66.3
Q ss_pred EEEEEEecCCC----------cCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCC
Q 041665 82 STAILQFPAGA----------INPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKAN 151 (206)
Q Consensus 82 ~~~~~~l~pg~----------~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~ 151 (206)
+...+.+.|+. ..++|+|+. .|+.||++|++.+.+.+.+++.+...+++||++++|+|+.|++.+..+.
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~~-~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~ 153 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHLD-EEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKN 153 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECSS-CEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTC
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECCc-ceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCC
Confidence 45556677775 238999987 9999999999999998865666678999999999999999999987777
Q ss_pred ccEEEEEEecCC
Q 041665 152 QPAAAISAFGSA 163 (206)
Q Consensus 152 ~~a~~i~~~~s~ 163 (206)
..+++-+|...
T Consensus 154 -~~~airlF~~~ 164 (191)
T 1vr3_A 154 -YVKAMRLFVGE 164 (191)
T ss_dssp -CEEEEEEESSS
T ss_pred -CEEEEEEECCC
Confidence 78888877644
No 93
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.08 E-value=8.6e-10 Score=92.95 Aligned_cols=75 Identities=12% Similarity=0.086 Sum_probs=67.4
Q ss_pred CCeEEEEEEEecCCCcCCC-ccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEE
Q 041665 78 GQSVSTAILQFPAGAINPP-HTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAA 156 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~~~~-H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~ 156 (206)
...+.+.++++.||+..+. |.|. .+|.+||++|++.+.++++ .+.+++||+++++++.+|++.|.|++ ++++
T Consensus 183 ~~d~~~~~~t~~PG~~~p~~e~H~-~eh~~~vL~G~g~y~l~~~-----~~~V~~GD~i~~~~~~~h~~~n~G~e-~~~y 255 (266)
T 4e2q_A 183 AYDFNIHTMDFQPGEFLNVKEVHY-NQHGLLLLEGQGIYRLGDN-----WYPVQAGDVIWMAPFVPQWYAALGKT-RSRY 255 (266)
T ss_dssp TCSEEEEEEEECTTCBCSSCCCCS-CCEEEEEEECEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEESSS-CEEE
T ss_pred ccceEEEEEEECCCcCcCCceEcc-cceEEEEEeceEEEEECCE-----EEEecCCCEEEECCCCcEEEEeCCCC-CEEE
Confidence 5678999999999999986 7775 4899999999999988665 89999999999999999999999999 9988
Q ss_pred EEE
Q 041665 157 ISA 159 (206)
Q Consensus 157 i~~ 159 (206)
|.-
T Consensus 256 l~y 258 (266)
T 4e2q_A 256 LLY 258 (266)
T ss_dssp EEE
T ss_pred EEE
Confidence 754
No 94
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.07 E-value=1e-09 Score=97.18 Aligned_cols=75 Identities=16% Similarity=0.121 Sum_probs=66.7
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCC-CCccEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSK-ANQPAAAI 157 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g-~~~~a~~i 157 (206)
..+.+....++||+..++|.|.. .|++||++|+.++.++++ ++.+++||++++|+|..|.+.|.+ ++ ++.+|
T Consensus 292 ~tl~~~~~~l~PG~~~~~HrH~~-~~v~~VleG~G~~~V~ge-----~~~~~~GD~~~iP~g~~H~~~N~g~~e-~~~ll 364 (394)
T 3bu7_A 292 LTMGASMQMLRPGEHTKAHRHTG-NVIYNVAKGQGYSIVGGK-----RFDWSEHDIFCVPAWTWHEHCNTQERD-DACLF 364 (394)
T ss_dssp SSCEEEEEEECTTCBCCCEEESS-CEEEEEEECCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECCSSC-CEEEE
T ss_pred CeeeEEEEEECCCCcCCCcccCC-cEEEEEEeCeEEEEECCE-----EEEEeCCCEEEECCCCeEEeEeCCCCC-CeEEE
Confidence 34688889999999999999985 799999999998887554 899999999999999999999998 67 88888
Q ss_pred EEe
Q 041665 158 SAF 160 (206)
Q Consensus 158 ~~~ 160 (206)
++.
T Consensus 365 ~i~ 367 (394)
T 3bu7_A 365 SFN 367 (394)
T ss_dssp EEE
T ss_pred Eee
Confidence 774
No 95
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.03 E-value=3.1e-10 Score=99.64 Aligned_cols=76 Identities=22% Similarity=0.284 Sum_probs=67.4
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEE-EEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILE-VGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~-~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i 157 (206)
..+.+....++||+..++|.|.. .|+.||++|+.. +.++++ +..+++||++++|+|..|.+.|.|++ +++++
T Consensus 101 ~~L~a~~~~l~PG~~~~~HrH~~-~ev~~VleG~G~~~~vdG~-----~~~~~~GD~v~iP~g~~H~~~N~gde-~l~~l 173 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPEHRHSQ-NAFRFVVEGEGVWTVVNGD-----PVRMSRGDLLLTPGWCFHGHMNDTDQ-PMAWI 173 (368)
T ss_dssp SSCEEEEEEECTTCEEEEEEESS-CEEEECSSCEEEEEEETTE-----EEEEETTCEEEECTTCCEEEEECSSS-CEEEE
T ss_pred CceEEEEEEECCCCccCceeccc-ceEEEEEecceEEEEECCE-----EEEEeCCCEEEECCCCcEEeEeCCCC-CeEEE
Confidence 46789999999999999999975 899999999995 544333 89999999999999999999999999 99999
Q ss_pred EEec
Q 041665 158 SAFG 161 (206)
Q Consensus 158 ~~~~ 161 (206)
.+++
T Consensus 174 ~v~D 177 (368)
T 3nw4_A 174 DGLD 177 (368)
T ss_dssp EEEC
T ss_pred Eecc
Confidence 8764
No 96
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=99.02 E-value=4.8e-10 Score=81.22 Aligned_cols=59 Identities=20% Similarity=0.228 Sum_probs=49.3
Q ss_pred EEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEE-eCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCC
Q 041665 85 ILQFPAGAINPPHTHPRSAELLFVVSGILEVGFI-DTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKAN 151 (206)
Q Consensus 85 ~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~-~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~ 151 (206)
..+..||.. ++| |+ ..|++||++|++++.+. ++ .+.|++||+++||+|.+|.+.|.++.
T Consensus 35 ~~~~~pg~~-~~h-H~-~~E~~~Vl~G~~~~~i~~g~-----~~~l~~GD~i~ip~g~~H~~~n~~~~ 94 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-YD-TNETCYILEGKVEVTTEDGK-----KYVIEKGDLVTFPKGLRCRWKVLEPV 94 (101)
T ss_dssp EEEECSEEE-EEE-CS-SCEEEEEEEEEEEEEETTCC-----EEEEETTCEEEECTTCEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-CC-ceEEEEEEeCEEEEEECCCC-----EEEECCCCEEEECCCCcEEEEeCCCe
Confidence 456777653 456 65 59999999999999986 44 79999999999999999999998765
No 97
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.00 E-value=9.6e-10 Score=97.44 Aligned_cols=77 Identities=18% Similarity=0.224 Sum_probs=67.4
Q ss_pred CCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEe-CCCCccEEE
Q 041665 78 GQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYN-SKANQPAAA 156 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N-~g~~~~a~~ 156 (206)
+..+.+....++||+..++|.|.. .|+.||++|+..+...+ |+ ++.+++||++++|+|..|...| .|++ ++++
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~~-~ev~~IleG~G~~t~v~--G~--~~~~~~GD~i~~P~g~~H~~~N~~gde-~l~~ 193 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHAA-SALRFIMEGSGAYTIVD--GH--KVELGANDFVLTPNGTWHEHGILESGT-ECIW 193 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEESS-CEEEEEEECSCEEEEET--TE--EEEECTTCEEEECTTCCEEEEECTTCC-CEEE
T ss_pred CCeeEEEEEEECCCCCcCCccCCc-ceEEEEEEeeEEEEEEC--CE--EEEEcCCCEEEECcCCCEEEEcCCCCC-CEEE
Confidence 456789999999999999999976 79999999998763332 33 7999999999999999999999 9999 9999
Q ss_pred EEEe
Q 041665 157 ISAF 160 (206)
Q Consensus 157 i~~~ 160 (206)
+.+.
T Consensus 194 l~v~ 197 (394)
T 3bu7_A 194 QDGL 197 (394)
T ss_dssp EEEE
T ss_pred EEcc
Confidence 9865
No 98
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.99 E-value=3.6e-09 Score=83.28 Aligned_cols=70 Identities=14% Similarity=0.246 Sum_probs=58.0
Q ss_pred CCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCC
Q 041665 77 NGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSK 149 (206)
Q Consensus 77 ~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g 149 (206)
|+..+.++.+ -.|++...+|.|+. +|++||++|++++.+.++ |+.....|++||++++|+|++|+....+
T Consensus 32 nd~~~~V~~v-~Gpn~r~d~H~h~~-dE~FyvlkG~m~i~v~d~-g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 32 QDSDFIVTVV-GGPNHRTDYHDDPL-EEFFYQLRGNAYLNLWVD-GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp SSCSEEEEEE-CSCBCCCCEEECSS-CEEEEEEESCEEEEEEET-TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cCCcEEEEEE-cCCCcCccCcCCCC-ceEEEEEeeEEEEEEEcC-CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 4455555544 46788899998865 999999999999999874 6566899999999999999999998765
No 99
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.96 E-value=1.4e-09 Score=90.30 Aligned_cols=71 Identities=24% Similarity=0.238 Sum_probs=62.4
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~ 158 (206)
..+.+.+++++||+....|. .+|++||++|++++.+.++ ++.|++||.++||++.+|+++|. + ++++++
T Consensus 48 ~~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~~~~-----~~~l~~Gd~~~~p~~~~H~~~n~--~-~~~~l~ 116 (246)
T 1sfn_A 48 ARFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAVGGE-----TRTLREYDYVYLPAGEKHMLTAK--T-DARVSV 116 (246)
T ss_dssp CSSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEECSSC-----EEEECTTEEEEECTTCCCEEEEE--E-EEEEEE
T ss_pred CcEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeC--C-CEEEEE
Confidence 45688999999999887774 6999999999999998766 89999999999999999999998 6 777777
Q ss_pred Ee
Q 041665 159 AF 160 (206)
Q Consensus 159 ~~ 160 (206)
+.
T Consensus 117 v~ 118 (246)
T 1sfn_A 117 FE 118 (246)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 100
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.96 E-value=1e-09 Score=82.31 Aligned_cols=73 Identities=14% Similarity=0.206 Sum_probs=57.2
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEE
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISA 159 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~ 159 (206)
.+.+..++..||... +|.|.. +|++||++|++++.+. +|+ .+.|++||++++|+|..|.++|.++. ..++++
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~~-~E~~~Vl~G~~~l~~~--~g~--~~~l~~GD~~~ip~g~~h~~~~~~~~--rK~yv~ 119 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTGY-IEYCHIIEGEARLVDP--DGT--VHAVKAGDAFIMPEGYTGRWEVDRHV--KKIYFV 119 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTTE-EEEEEEEEEEEEEECT--TCC--EEEEETTCEEEECTTCCCEEEEEEEE--EEEEEE
T ss_pred CEEEEEEEECCCcee-eEcCCC-cEEEEEEEEEEEEEEC--CCe--EEEECCCCEEEECCCCeEEEEECCce--eEEEEE
Confidence 467888888888654 566643 8999999999999862 233 78999999999999999999998655 345544
Q ss_pred e
Q 041665 160 F 160 (206)
Q Consensus 160 ~ 160 (206)
+
T Consensus 120 ~ 120 (123)
T 3bcw_A 120 T 120 (123)
T ss_dssp E
T ss_pred E
Confidence 4
No 101
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.88 E-value=4.1e-09 Score=84.88 Aligned_cols=70 Identities=24% Similarity=0.377 Sum_probs=60.8
Q ss_pred EEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEe
Q 041665 81 VSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAF 160 (206)
Q Consensus 81 i~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~ 160 (206)
..+..++++||+..+.|+|++ .|+.||++|++. ++ ...+.+||.+++|+|..|...+.+++ .++++++.
T Consensus 125 ~~v~l~~~~pG~~~p~H~H~g-~E~~~VL~G~f~----de-----~~~~~~Gd~~~~p~g~~H~p~a~~~~-gc~~l~~~ 193 (195)
T 2q1z_B 125 AIARLLWIPGGQAVPDHGHRG-LELTLVLQGAFR----DE-----TDRFGAGDIEIADQELEHTPVAERGL-DCICLAAT 193 (195)
T ss_dssp SEEEEEEECTTCBCCCCCCSS-CEEEEEEESEEE----CS-----SSEEETTCEEEECSSCCCCCEECSSS-CEEEEEEE
T ss_pred cEEEEEEECCCCCCCCcCCCC-eEEEEEEEEEEE----CC-----cEEECCCeEEEeCcCCccCCEeCCCC-CEEEEEEe
Confidence 366788999999999999975 999999999854 54 35799999999999999999998777 89998876
Q ss_pred c
Q 041665 161 G 161 (206)
Q Consensus 161 ~ 161 (206)
+
T Consensus 194 d 194 (195)
T 2q1z_B 194 D 194 (195)
T ss_dssp C
T ss_pred c
Confidence 4
No 102
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.85 E-value=6e-08 Score=76.64 Aligned_cols=86 Identities=16% Similarity=0.290 Sum_probs=73.5
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCC-Cc---EEEEEEcCCCEEEECCCCeEEEEeCCCCccEE
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTT-NK---LYTQTLQIGDMFVFPKGLVHYQYNSKANQPAA 155 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~-~~---~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~ 155 (206)
++++..+...||...++|-|..+..++.|++|+++......+ ++ ..+..+.+||++++|++.+|+++|.+++ +++
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~-~aV 146 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSE-RMV 146 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSS-CEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCC-CEE
Confidence 468899999999999999998878999999999998765322 32 1368899999999999999999999998 999
Q ss_pred EEEEecCCCcc
Q 041665 156 AISAFGSASAG 166 (206)
Q Consensus 156 ~i~~~~s~~pg 166 (206)
.+-+|+....+
T Consensus 147 SlHvY~pp~~~ 157 (171)
T 3eqe_A 147 SLHVYSPPLED 157 (171)
T ss_dssp EEEEEESCCCC
T ss_pred EEEEeCCCccc
Confidence 99999877543
No 103
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.80 E-value=2.8e-09 Score=84.89 Aligned_cols=69 Identities=20% Similarity=0.260 Sum_probs=56.6
Q ss_pred CCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecCCCcc
Q 041665 94 NPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGSASAG 166 (206)
Q Consensus 94 ~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg 166 (206)
.++|+|+. .|+.||++|++.+.+. .+++.+...+++||++++|+|+.|++.+..+. ...++-+|... |+
T Consensus 93 ~~~H~H~~-~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~-~~~~ir~F~~~-~~ 161 (179)
T 1zrr_A 93 LNEHTHGE-DEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEP-NFTAIRIFDNP-EG 161 (179)
T ss_dssp HSCBEESS-CEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCS-SCEEEEEECCG-GG
T ss_pred ccceECCh-heEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCc-eEEEEEeccCC-CC
Confidence 57999987 9999999999999876 34555567799999999999999999887666 67777777544 44
No 104
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.80 E-value=8.6e-09 Score=80.54 Aligned_cols=73 Identities=15% Similarity=0.242 Sum_probs=61.7
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeC--CCCccEEEE
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNS--KANQPAAAI 157 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~--g~~~~a~~i 157 (206)
+..+.+++++||+..+.|+|+. .|.+||++|++++. +++ ..+++||.++.|+|..|...+. +++ .++++
T Consensus 41 g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~~---e~~----~~~~~Gd~~~~P~g~~H~~~~~~~~~e-~~~~~ 111 (159)
T 3ebr_A 41 GETITLLKAPAGMEMPRHHHTG-TVIVYTVQGSWRYK---EHD----WVAHAGSVVYETASTRHTPQSAYAEGP-DIITF 111 (159)
T ss_dssp TEEEEEEEECSSCBCCCEEESS-CEEEEEEESCEEET---TSS----CCBCTTCEEEECSSEEECEEESSSSSS-CEEEE
T ss_pred CeEEEEEEECCCCCcccccCCC-CEEEEEEEeEEEEe---CCC----eEECCCeEEEECCCCcceeEeCCCCCC-CEEEE
Confidence 4578889999999999999987 88899999998752 322 4799999999999999999998 677 88888
Q ss_pred EEec
Q 041665 158 SAFG 161 (206)
Q Consensus 158 ~~~~ 161 (206)
.+.+
T Consensus 112 ~~~~ 115 (159)
T 3ebr_A 112 NIVA 115 (159)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7553
No 105
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.80 E-value=1.2e-08 Score=80.75 Aligned_cols=81 Identities=17% Similarity=0.222 Sum_probs=63.2
Q ss_pred eEEEEEEEecCCCcCCCccCCC------CcEEEEEEeeEEEEEEEeCCCc----------------EEEEEEcCCCEEEE
Q 041665 80 SVSTAILQFPAGAINPPHTHPR------SAELLFVVSGILEVGFIDTTNK----------------LYTQTLQIGDMFVF 137 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~------a~E~~yVl~G~~~~~~~~~~~~----------------~~~~~L~~GD~~~~ 137 (206)
++...++.+.||+..|.|.|+. -.|-++|+.|++++.+.++.-. --...|++||.+.+
T Consensus 52 ~Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtI 131 (175)
T 2y0o_A 52 RYCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTI 131 (175)
T ss_dssp SEEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEE
T ss_pred CceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEE
Confidence 3688899999999999999998 8999999999999987432100 02469999999999
Q ss_pred CCCCeEEEEeCCCCccEEEEEEecCC
Q 041665 138 PKGLVHYQYNSKANQPAAAISAFGSA 163 (206)
Q Consensus 138 P~g~~H~~~N~g~~~~a~~i~~~~s~ 163 (206)
|+|+.|+++| +.+ . +++.-+++.
T Consensus 132 ppg~~H~f~a-gee-g-vli~EvSt~ 154 (175)
T 2y0o_A 132 PPNTKHWFQA-GEE-G-AVVTEMSST 154 (175)
T ss_dssp CTTCCEEEEE-EEE-E-EEEEEEEEC
T ss_pred CCCCcEEEEe-CCC-C-EEEEEEeCC
Confidence 9999999999 334 3 444444444
No 106
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.80 E-value=2.6e-09 Score=82.04 Aligned_cols=75 Identities=19% Similarity=0.069 Sum_probs=57.9
Q ss_pred EEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEE-EEeCCCCccEEEEEEe
Q 041665 82 STAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHY-QYNSKANQPAAAISAF 160 (206)
Q Consensus 82 ~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~-~~N~g~~~~a~~i~~~ 160 (206)
.+.+++++||+..+.|+|+. .|.+||++|+++....+. .....+++||.+++|+|..|. ..+ .+ .++++.++
T Consensus 45 ~~~~~~~~pG~~~p~H~H~~-~ee~~VL~G~~~~~~g~~---~~~~~~~~Gd~~~~p~g~~H~p~~~--~e-~~~~l~~~ 117 (145)
T 2o1q_A 45 WTAIFDCPAGSSFAAHVHVG-PGEYFLTKGKMDVRGGKA---AGGDTAIAPGYGYESANARHDKTEF--PV-ASEFYMSF 117 (145)
T ss_dssp EEEEEEECTTEEECCEEESS-CEEEEEEEEEEEETTCGG---GTSEEEESSEEEEECTTCEESCCEE--EE-EEEEEEEE
T ss_pred EEEEEEECCCCCCCccCCCC-CEEEEEEEeEEEEcCCCE---ecceEeCCCEEEEECcCCccCCeEC--CC-CeEEEEEE
Confidence 57789999999999999987 777999999988642221 002789999999999999999 443 34 56777776
Q ss_pred cCC
Q 041665 161 GSA 163 (206)
Q Consensus 161 ~s~ 163 (206)
+..
T Consensus 118 ~gp 120 (145)
T 2o1q_A 118 LGP 120 (145)
T ss_dssp ESC
T ss_pred CCc
Confidence 544
No 107
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.73 E-value=1.6e-08 Score=79.42 Aligned_cols=74 Identities=18% Similarity=0.221 Sum_probs=59.6
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCC--CCccEEEE
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSK--ANQPAAAI 157 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g--~~~~a~~i 157 (206)
+..+..++++||+..+.|+|+. .|.+||++|++... +.+ .+.+++||.++.|+|..|...+.. ++ .|+++
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~f~~~---~~~---~~~~~aGd~~~~P~g~~H~~~a~~~~~~-gci~l 113 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHTG-TVHMYTISGCWYYT---EYP---GQKQTAGCYLYEPGGSIHQFNTPRDNEG-QTEVI 113 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEESS-CEEEEEEESEEEET---TCT---TSCEETTEEEEECTTCEECEECCTTCSS-CEEEE
T ss_pred CcEEEEEEECCCCcCCcccCCC-CEEEEEEEEEEEEC---CCc---eEEECCCeEEEeCCCCceeeEeCCCCCC-CcEEE
Confidence 4578899999999999999986 99999999998762 211 257899999999999999999876 33 67666
Q ss_pred EEec
Q 041665 158 SAFG 161 (206)
Q Consensus 158 ~~~~ 161 (206)
.+..
T Consensus 114 ~v~~ 117 (165)
T 3cjx_A 114 FMLS 117 (165)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6544
No 108
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.72 E-value=3.8e-08 Score=74.80 Aligned_cols=70 Identities=13% Similarity=0.205 Sum_probs=54.3
Q ss_pred EEEEEEecC----CCcCCCccCCCCcEEEEEEeeEEEEEEEeCC-C--cEEEEEEcCCCEEEECCCCeEEEEeCCCC
Q 041665 82 STAILQFPA----GAINPPHTHPRSAELLFVVSGILEVGFIDTT-N--KLYTQTLQIGDMFVFPKGLVHYQYNSKAN 151 (206)
Q Consensus 82 ~~~~~~l~p----g~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~-~--~~~~~~L~~GD~~~~P~g~~H~~~N~g~~ 151 (206)
.++.....| +++..+|.|++.+|+++|++|++++.+.+.. + +.....+++|++++||+|+.|......+.
T Consensus 26 ~Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e~ 102 (140)
T 3d0j_A 26 LVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKDT 102 (140)
T ss_dssp EEEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTTC
T ss_pred EEEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCCce
Confidence 344444444 4566789999999999999999999988531 1 23378999999999999999999886544
No 109
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.71 E-value=5.6e-08 Score=84.71 Aligned_cols=76 Identities=17% Similarity=0.219 Sum_probs=61.9
Q ss_pred CCeEEEEEEEecCC---CcCCCccCCCCcEEEEEEeeEEEEEEEe-CCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCcc
Q 041665 78 GQSVSTAILQFPAG---AINPPHTHPRSAELLFVVSGILEVGFID-TTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQP 153 (206)
Q Consensus 78 ~~gi~~~~~~l~pg---~~~~~H~H~~a~E~~yVl~G~~~~~~~~-~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~ 153 (206)
...+.+..+++.++ +..+.|.|+. +|++||++|++++.+.+ + .+.|++||+++||+|.+|.+.|.++.
T Consensus 246 ~~~f~~~~i~~~~~~~g~~~~~h~~~~-~~~~~vleG~~~i~i~g~~-----~~~l~~Gd~~~iPag~~h~~~~~~~~-- 317 (350)
T 1juh_A 246 DTNYTLSTISMSTTPSTVTVPTWSFPG-ACAFQVQEGRVVVQIGDYA-----ATELGSGDVAFIPGGVEFKYYSEAYF-- 317 (350)
T ss_dssp GGCEEEEEEEECCCCTTSCCCCBCCSS-CEEEEEEESCEEEEETTSC-----CEEECTTCEEEECTTCCEEEEESSSS--
T ss_pred eeEEEEEEEeeccccCCCCCCcccCCC-cEEEEEEeeEEEEEECCeE-----EEEeCCCCEEEECCCCCEEEEecCCe--
Confidence 33578888888884 4678898976 99999999999999876 4 79999999999999999999998654
Q ss_pred EEEEEEec
Q 041665 154 AAAISAFG 161 (206)
Q Consensus 154 a~~i~~~~ 161 (206)
+.++.+.+
T Consensus 318 ~~~l~~~~ 325 (350)
T 1juh_A 318 SKVLFVSS 325 (350)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEec
Confidence 55555443
No 110
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.71 E-value=9.8e-08 Score=75.05 Aligned_cols=62 Identities=16% Similarity=0.289 Sum_probs=52.2
Q ss_pred ecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCC----cEEEEEEcCCCEEEECCCCeEEEEeCCCC
Q 041665 88 FPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTN----KLYTQTLQIGDMFVFPKGLVHYQYNSKAN 151 (206)
Q Consensus 88 l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~----~~~~~~L~~GD~~~~P~g~~H~~~N~g~~ 151 (206)
-.|+....+|.|+ .+|++|+++|++.+.+.++ | +.....|++||++++|+|++|+.....+.
T Consensus 41 gGPn~r~D~H~~~-~eE~Fy~lkG~m~l~v~d~-g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~e~ 106 (176)
T 1zvf_A 41 GGPNERTDYHINP-TPEWFYQKKGSMLLKVVDE-TDAEPKFIDIIINEGDSYLLPGNVPHSPVRFADT 106 (176)
T ss_dssp CSSBCCSCEEECS-SCEEEEEEESCEEEEEEEC-SSSSCEEEEEEECTTEEEEECTTCCEEEEECTTC
T ss_pred cCCCcCCcCcCCC-CceEEEEEeCEEEEEEEcC-CCcccceeeEEECCCCEEEcCCCCCcCCcccCCc
Confidence 4566788999665 5999999999999999884 5 56689999999999999999999765433
No 111
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=98.68 E-value=1.6e-07 Score=66.96 Aligned_cols=74 Identities=15% Similarity=0.171 Sum_probs=61.4
Q ss_pred EEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecCC-Ccceeeech---hhhcCCCCHHHHHHHcCCCHHHHHHHHh
Q 041665 125 YTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGSA-SAGTVSVPT---TVFATGIDENILAKAFKTDVTTIQKIKA 200 (206)
Q Consensus 125 ~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~-~pg~~~~~~---~~f~~~~p~~vla~~f~~~~~~v~~l~~ 200 (206)
+...|++||+++||+|.+-...+.. ...+++.-++. ++....++. +++. .+|.++++.+|+++.+++++|+.
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~---~le~v~F~tna~~~~~~~LAG~~~Svl~-~l~~evla~aF~~s~ee~~~l~~ 81 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAAS---DLNMVGIGVNAENNERNFLAGHKENVIR-QIPRQVSDLTFPGSGEEVEELLE 81 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS---SEEEEEEEESCTTCCEEESSSSTTBSTT-TSCHHHHHHHSSSCTHHHHHHTT
T ss_pred hhceecCCcEEEECCCCceeEEecC---CeEEEEEEecCCCCeeeeccCCcccHHH-hCCHHHHHHHcCCCHHHHHHHHh
Confidence 4678999999999999999999863 46676664444 888888864 6775 79999999999999999999987
Q ss_pred hc
Q 041665 201 GL 202 (206)
Q Consensus 201 ~~ 202 (206)
+-
T Consensus 82 ~q 83 (93)
T 1dgw_Y 82 NQ 83 (93)
T ss_dssp SC
T ss_pred cC
Confidence 53
No 112
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.67 E-value=2.9e-07 Score=74.85 Aligned_cols=82 Identities=17% Similarity=0.201 Sum_probs=69.7
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEe--CCCcE----EEEEEcCCCEEEECC--CCeEEEEeC-CC
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFID--TTNKL----YTQTLQIGDMFVFPK--GLVHYQYNS-KA 150 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~--~~~~~----~~~~L~~GD~~~~P~--g~~H~~~N~-g~ 150 (206)
.+.+..+...||...++|-|.. ..+++|++|+++..+.. .+|+. .+.++.+||++++++ |.+|.+.|. ++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCSS-CEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEeCCCcccCcccCCc-ceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 4688999999999999999986 99999999999887654 22322 268999999999999 999999999 67
Q ss_pred CccEEEEEEecCC
Q 041665 151 NQPAAAISAFGSA 163 (206)
Q Consensus 151 ~~~a~~i~~~~s~ 163 (206)
+ +++.+-+|...
T Consensus 157 ~-~avsLHvY~~~ 168 (208)
T 2gm6_A 157 R-VSISIHVYGAN 168 (208)
T ss_dssp S-CEEEEEEESSC
T ss_pred C-cEEEEEEEcCC
Confidence 7 89999999654
No 113
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.62 E-value=1.7e-07 Score=80.89 Aligned_cols=76 Identities=20% Similarity=0.222 Sum_probs=62.6
Q ss_pred EEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCC-cEEEEEEcC-C---CEEEECCCCeEEEEeCCCCccEEE
Q 041665 82 STAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTN-KLYTQTLQI-G---DMFVFPKGLVHYQYNSKANQPAAA 156 (206)
Q Consensus 82 ~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~-~~~~~~L~~-G---D~~~~P~g~~H~~~N~g~~~~a~~ 156 (206)
........||....+|||....|.++|++|++.+.+.+..+ + ...+.. | +.+++|+|..|.+.|.|++ ++++
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~-~~~~ 349 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDE--IIEYYVSGDKLEVVDIPVGYTHNIENLGDT-DMVT 349 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCC--CEEEEEETTBCCEEEECTTEEEEEEECSSS-CEEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCc--EEEEEecCCcceEEEeCCCceEEeEEcCCC-cEEE
Confidence 44556789999999999999899999999999998775543 4 445555 6 9999999999999999988 8877
Q ss_pred EEEe
Q 041665 157 ISAF 160 (206)
Q Consensus 157 i~~~ 160 (206)
+..-
T Consensus 350 ~~~~ 353 (369)
T 3st7_A 350 IMWV 353 (369)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7653
No 114
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.59 E-value=2.4e-07 Score=77.87 Aligned_cols=68 Identities=12% Similarity=0.249 Sum_probs=56.8
Q ss_pred EEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCC
Q 041665 81 VSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKAN 151 (206)
Q Consensus 81 i~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~ 151 (206)
+.++.+ -.|+....+| |...+|++|+++|.+.+.+.++ |+.....|++||++++|+|++|+.....+.
T Consensus 32 ~~V~~v-gGpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d~-g~~~~V~i~eGemfllP~gv~HsP~r~~et 99 (286)
T 2qnk_A 32 LKVMFI-GGPNTRKDYH-IEEGEEVFYQLEGDMVLRVLEQ-GKHRDVVIRQGEIFLLPARVPHSPQRFANT 99 (286)
T ss_dssp EEEEEE-CSCBCCCCEE-ECSSCEEEEEEESCEEEEEEET-TEEEEEEECTTEEEEECTTCCEEEEECTTC
T ss_pred EEEEEE-eCCCcCccCc-CCCCCeEEEEEeCeEEEEEEeC-CceeeEEECCCeEEEeCCCCCcCCcccCCe
Confidence 444443 3566678999 9999999999999999999984 767789999999999999999999885544
No 115
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.58 E-value=3e-07 Score=80.71 Aligned_cols=87 Identities=15% Similarity=0.115 Sum_probs=69.0
Q ss_pred ceE-EEEeecc-ccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECC
Q 041665 62 IFR-VSKASMA-EFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPK 139 (206)
Q Consensus 62 g~~-v~~~~~~-~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~ 139 (206)
|.. +.-+|.. .-+..++ +.+....++||...++|.|.. .++++|++|+.++.++++ ++..++||+|++|+
T Consensus 260 g~~~~~y~NP~tg~~~~pt--i~~~~~~L~pG~~t~~hRht~-s~Vy~V~eG~G~~~I~~~-----~~~w~~gD~fvvP~ 331 (368)
T 3nw4_A 260 GHAAIRYVNPTTGGDVMPT--LRCEFHRLRAGTETATRNEVG-STVFQVFEGAGAVVMNGE-----TTKLEKGDMFVVPS 331 (368)
T ss_dssp TEEEEECBCTTTSSBSSSS--CEEEEEEECTTCBCCCEEESS-CEEEEEEESCEEEEETTE-----EEEECTTCEEEECT
T ss_pred ceEEEEEeCCCCCCCcchh--HHhheEEECCCCccCCeeccc-cEEEEEEeCcEEEEECCE-----EEEecCCCEEEECC
Confidence 555 4555533 2233444 466677799999999999975 899999999999998665 89999999999999
Q ss_pred CCeEEEEeCCCCccEEEEEE
Q 041665 140 GLVHYQYNSKANQPAAAISA 159 (206)
Q Consensus 140 g~~H~~~N~g~~~~a~~i~~ 159 (206)
+..|+..|. + ++.+|.+
T Consensus 332 w~~h~~~n~--~-~a~Lf~~ 348 (368)
T 3nw4_A 332 WVPWSLQAE--T-QFDLFRF 348 (368)
T ss_dssp TCCEEEEES--S-SEEEEEE
T ss_pred CCcEEEEeC--C-CEEEEEE
Confidence 999999996 5 7887765
No 116
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.54 E-value=1.6e-06 Score=70.01 Aligned_cols=88 Identities=19% Similarity=0.181 Sum_probs=73.5
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCC--C-----cEEEEEEcCCCEEEE-CCCCeEEEEeCC-C
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTT--N-----KLYTQTLQIGDMFVF-PKGLVHYQYNSK-A 150 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~--~-----~~~~~~L~~GD~~~~-P~g~~H~~~N~g-~ 150 (206)
.+++..+...||...++|-|..+..+++|++|+++....+.. + ...+..+++||+.++ |++-+|++.|.+ +
T Consensus 69 ~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~ 148 (200)
T 3eln_A 69 KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHT 148 (200)
T ss_dssp TCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSS
T ss_pred ceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCC
Confidence 368888999999999999998789999999999998865421 1 123689999999999 888899999999 6
Q ss_pred CccEEEEEEecCCCccee
Q 041665 151 NQPAAAISAFGSASAGTV 168 (206)
Q Consensus 151 ~~~a~~i~~~~s~~pg~~ 168 (206)
+ +++-|-+|.....+..
T Consensus 149 ~-~avSlHvY~pp~~~~~ 165 (200)
T 3eln_A 149 E-PAVSLHLYSPPFDTCH 165 (200)
T ss_dssp C-CEEEEEEEESCCSEEE
T ss_pred C-CEEEEEeCCCCccceE
Confidence 7 9999999987766543
No 117
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.52 E-value=7.6e-07 Score=67.69 Aligned_cols=59 Identities=17% Similarity=0.123 Sum_probs=49.1
Q ss_pred CCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCC-CccEEEEEEe
Q 041665 95 PPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKA-NQPAAAISAF 160 (206)
Q Consensus 95 ~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~-~~~a~~i~~~ 160 (206)
.+|.|+. -|++||++|++++.++++ .+.+++||++++|+|.+|.+.+.++ + +...+++.
T Consensus 32 ~p~~h~~-~~i~~v~~G~~~~~i~~~-----~~~l~~Gd~~~i~p~~~H~~~~~~~~~-~~~~~~i~ 91 (164)
T 2arc_A 32 RPLGMKG-YILNLTIRGQGVVKNQGR-----EFVCRPGDILLFPPGEIHHYGRHPEAR-EWYHQWVY 91 (164)
T ss_dssp ETTCCSS-EEEEEEEEECEEEEETTE-----EEEECTTCEEEECTTCCEEEEECTTSS-EEEEEEEE
T ss_pred cccCCCc-eEEEEEEEeEEEEEECCE-----EEEecCCeEEEEcCCCCEEEEeCCCCC-cEEEEEEE
Confidence 4788965 999999999999988665 8999999999999999999998763 5 55555543
No 118
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.50 E-value=5.1e-07 Score=74.12 Aligned_cols=88 Identities=16% Similarity=0.188 Sum_probs=66.2
Q ss_pred CceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCC
Q 041665 61 PIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKG 140 (206)
Q Consensus 61 ~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g 140 (206)
.|.+...+.... . ..+..+..++++||...+.|+|+. .|.+||++|++. ++ ...+.+||.++.|+|
T Consensus 27 ~Gv~~~~L~~~~--~--e~g~~~~lvr~~pG~~~p~H~H~g-~Ee~~VL~G~f~----d~-----~~~~~~Gd~~~~P~g 92 (223)
T 3o14_A 27 KGVERRMLDRIG--G--EVARATSIVRYAPGSRFSAHTHDG-GEEFIVLDGVFQ----DE-----HGDYPAGTYVRNPPT 92 (223)
T ss_dssp TTEEEEEEEEES--S--SSCEEEEEEEECTTEECCCEECTT-CEEEEEEEEEEE----ET-----TEEEETTEEEEECTT
T ss_pred CCEEEEEeecCC--C--ccccEEEEEEECCCCCcccccCCC-CEEEEEEEeEEE----EC-----CeEECCCeEEEeCCC
Confidence 355555553322 1 123466788999999999999986 899999999865 44 368999999999999
Q ss_pred CeEEEEeCCCCccEEEEEEecCCCc
Q 041665 141 LVHYQYNSKANQPAAAISAFGSASA 165 (206)
Q Consensus 141 ~~H~~~N~g~~~~a~~i~~~~s~~p 165 (206)
..|.... ++ .|++++.+..=+|
T Consensus 93 ~~H~p~a--~~-gc~~~vk~~~~~~ 114 (223)
T 3o14_A 93 TSHVPGS--AE-GCTIFVKLWQFDP 114 (223)
T ss_dssp CEECCEE--SS-CEEEEEEESCSCT
T ss_pred CccccEe--CC-CCEEEEEecCCCC
Confidence 9999886 45 6888887754343
No 119
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.45 E-value=3.2e-07 Score=71.16 Aligned_cols=118 Identities=17% Similarity=0.088 Sum_probs=75.3
Q ss_pred ceeccCCCCCCCcCCCCceEeccccccCCCCCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEE
Q 041665 29 DFVIPANSSNDAIDGNFFTFTGMRSIIEGDDPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFV 108 (206)
Q Consensus 29 d~cva~~~~p~~~~~~dF~~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yV 108 (206)
|+|.........+.+++-...-. + ..-...|..++.+.. . | ..|....+++++||...++|+|+. .|.+||
T Consensus 2 ~~~~~~~~~~~~v~~d~~~W~p~--P-~~l~~~Gv~~k~L~~-~-~---e~g~~t~lvr~~pG~~~p~H~H~g-~ee~~V 72 (153)
T 3bal_A 2 DYCNKKHTAEEYVKISDNNYVPF--P-EAFSDGGITWQLLHS-S-P---ETSSWTAIFNCPAGSSFASHIHAG-PGEYFL 72 (153)
T ss_dssp CCCCCCCCCCEEEECCGGGCEEC--C-GGGEESCCEEEEEEE-E-T---TTTEEEEEEEECTTEEECCEEESS-CEEEEE
T ss_pred ccccccCCcceEEccccCceecC--C-CccCCCCeEEEEEEE-C-C---ccceEEEEEEeCCCCCccCccCCC-CEEEEE
Confidence 78875544444555555332211 1 000033666666622 2 2 245688999999999999999987 888999
Q ss_pred EeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEe
Q 041665 109 VSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAF 160 (206)
Q Consensus 109 l~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~ 160 (206)
|+|++..+..+. .....+++|+.++-|+|..|...... + +.+++...
T Consensus 73 L~G~~~~~~Gd~---~~~~~~~aGsYv~ePpGs~H~p~~~~-~-~~~~~~~~ 119 (153)
T 3bal_A 73 TKGKMEVRGGEQ---EGGSTAYAPSYGFESSGALHGKTFFP-V-ESQFYMTF 119 (153)
T ss_dssp EESEEEETTCGG---GTSEEEESSEEEEECTTCEESCCEES-S-CEEEEEEE
T ss_pred EEEEEEecCccc---cCccccCCCeEEEcCCCCcccceeCC-C-CeEEEEEE
Confidence 999987643221 01468899999999999999854433 3 34444444
No 120
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=98.25 E-value=2e-05 Score=64.07 Aligned_cols=83 Identities=18% Similarity=0.200 Sum_probs=69.4
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeC--CCcEE----EEEEcCCCEEEECCC--CeEEEEeCC-C
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDT--TNKLY----TQTLQIGDMFVFPKG--LVHYQYNSK-A 150 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~--~~~~~----~~~L~~GD~~~~P~g--~~H~~~N~g-~ 150 (206)
.+++..+...||...++|-|. +.-++.|++|+++...... +|+.. ...+.+||+.+++++ .+|++.|.+ +
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d 150 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSD 150 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCC
Confidence 468899999999999999998 7999999999998776432 23321 478999999999987 899999985 6
Q ss_pred CccEEEEEEecCCC
Q 041665 151 NQPAAAISAFGSAS 164 (206)
Q Consensus 151 ~~~a~~i~~~~s~~ 164 (206)
+ +++-|-+|....
T Consensus 151 ~-~avSLHvYg~pl 163 (211)
T 3uss_A 151 R-TSISIHVYGANI 163 (211)
T ss_dssp S-CEEEEEEESSCG
T ss_pred C-CEEEEEEcCCCC
Confidence 7 899999997665
No 121
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=98.21 E-value=2.7e-05 Score=59.44 Aligned_cols=104 Identities=12% Similarity=0.021 Sum_probs=71.7
Q ss_pred CceEEEEeec-cccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCC-EEEEC
Q 041665 61 PIFRVSKASM-AEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGD-MFVFP 138 (206)
Q Consensus 61 ~g~~v~~~~~-~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD-~~~~P 138 (206)
..|.++.+.. ...|.- -.+ .......+||....||.|....|++++++|++.+.+.+. ....+..|.+.. .+.||
T Consensus 16 ~RG~L~~~e~~~~ipf~-ikR-vy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg-~~~~~~~L~~~~~gL~Ip 92 (141)
T 2pa7_A 16 SRGSLVAIEENKNIPFS-IKR-VYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDG-NIIQEITLDSPAVGLYVG 92 (141)
T ss_dssp TTEEEEEEETTTTSSSC-CCE-EEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECS-SCEEEEEECCTTEEEEEC
T ss_pred CCCcEEEEeccCCCCCC-ccE-EEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECC-cEEEEEEECCCCcEEEeC
Confidence 3666777665 445542 121 233344568888999999999999999999999998653 233466777665 59999
Q ss_pred CCCeEEEEeCCCCccEEEEEEecCC-Ccceee
Q 041665 139 KGLVHYQYNSKANQPAAAISAFGSA-SAGTVS 169 (206)
Q Consensus 139 ~g~~H~~~N~g~~~~a~~i~~~~s~-~pg~~~ 169 (206)
+|++|.+.+.+++ ++++.+-+.. +|....
T Consensus 93 pgvWh~~~~~s~~--avllvlas~~Yd~~dyi 122 (141)
T 2pa7_A 93 PAVWHEMHDFSSD--CVMMVLASDYYDETDYI 122 (141)
T ss_dssp TTCEEEEECCCTT--CEEEEEESSCCCGGGEE
T ss_pred CCEEEEEEEcCCC--eEEEEECCCCcCHHHee
Confidence 9999999999866 5555443322 454443
No 122
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=98.15 E-value=1.1e-05 Score=66.84 Aligned_cols=73 Identities=21% Similarity=0.231 Sum_probs=56.1
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~ 158 (206)
.++++..+.+ .|...... ++. +|++||++|++++... |+ .+++++||+++||+|..|.+...+.. -.+|+
T Consensus 45 ~~~~~G~~~~-~g~~~v~~-~p~-dE~~~VleG~~~lt~~---g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~--~~~y~ 114 (238)
T 3myx_A 45 QGIAAGIVEF-GTALSVEA-YPY-TEMLVMHRGSVTLTSG---TD--SVTLSTGESAVIGRGTQVRIDAQPES--LWAFC 114 (238)
T ss_dssp TSEEEEEEEE-CSEEEESS-CSS-EEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTCCEEEEECTTE--EEEEE
T ss_pred CCeEEEEEEe-cccccccc-CCC-cEEEEEEEeEEEEECC---Ce--EEEEcCCCEEEECCCCEEEEEecCCe--EEEEE
Confidence 3578888888 55544321 233 8999999999999862 33 78999999999999999999987654 45677
Q ss_pred Eec
Q 041665 159 AFG 161 (206)
Q Consensus 159 ~~~ 161 (206)
++.
T Consensus 115 ~~~ 117 (238)
T 3myx_A 115 AST 117 (238)
T ss_dssp EEC
T ss_pred ecc
Confidence 777
No 123
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.98 E-value=7.9e-05 Score=58.77 Aligned_cols=74 Identities=16% Similarity=0.119 Sum_probs=60.4
Q ss_pred EEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCC------CcEEEEEEc---CCCEEEECCCCeEEEEeCCCCccEEE
Q 041665 86 LQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTT------NKLYTQTLQ---IGDMFVFPKGLVHYQYNSKANQPAAA 156 (206)
Q Consensus 86 ~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~------~~~~~~~L~---~GD~~~~P~g~~H~~~N~g~~~~a~~ 156 (206)
....+|....+|+|....++++|++|++...++|.- |+.....|. ....++||+|..|.+.+.+++ ++++
T Consensus 58 s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~-~av~ 136 (174)
T 3ejk_A 58 SEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDT-PALV 136 (174)
T ss_dssp EEECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTS-CEEE
T ss_pred EECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCC-CEEE
Confidence 335688888999998889999999999999887642 456788898 567999999999999999986 5666
Q ss_pred EEEe
Q 041665 157 ISAF 160 (206)
Q Consensus 157 i~~~ 160 (206)
+...
T Consensus 137 ly~~ 140 (174)
T 3ejk_A 137 ANCT 140 (174)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 5543
No 124
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.90 E-value=2.7e-05 Score=57.54 Aligned_cols=64 Identities=16% Similarity=0.087 Sum_probs=49.2
Q ss_pred EEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCC
Q 041665 81 VSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKA 150 (206)
Q Consensus 81 i~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~ 150 (206)
+.....+..||... ++.+. .+|++||++|++++... +|. ..++++||+++||+|....++-...
T Consensus 42 ~~~GvWe~tPG~~~-~~~~~-~~E~~~iLeG~~~lt~d--dG~--~~~l~aGD~~~~P~G~~gtWev~e~ 105 (116)
T 3es4_A 42 TIVAVWMAEPGIYN-YAGRD-LEETFVVVEGEALYSQA--DAD--PVKIGPGSIVSIAKGVPSRLEILSS 105 (116)
T ss_dssp CEEEEEEECSEEEE-ECCCS-EEEEEEEEECCEEEEET--TCC--CEEECTTEEEEECTTCCEEEEECSC
T ss_pred EEEEEEecCCceeE-CeeCC-CcEEEEEEEeEEEEEeC--CCe--EEEECCCCEEEECCCCeEEEEEeEE
Confidence 46667788888643 34342 25999999999999754 344 6899999999999999998877644
No 125
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.70 E-value=0.00018 Score=59.42 Aligned_cols=64 Identities=11% Similarity=0.140 Sum_probs=51.6
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCC
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSK 149 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g 149 (206)
.++....+..||...+++++ .+|++||++|++++.. ++|+ .+++++||+++||+|..-.+....
T Consensus 166 ~~~~GiW~~tpG~~~~~~~~--~~E~~~ILeG~v~lt~--~~G~--~~~~~aGD~~~~P~G~~~tWev~e 229 (238)
T 3myx_A 166 TLRIGVWDSTPYERISRPHK--IHELMNLIEGRVVLSL--ENGS--SLTVNTGDTVFVAQGAPCKWTSTG 229 (238)
T ss_dssp SCEEEEEEECCEEBCCEECS--SCEEEEEEECCEEEEE--TTSC--EEEECTTCEEEECTTCEEEEEESS
T ss_pred CEEEeEEEeCCCEEECCcCC--CCEEEEEEEeEEEEEe--CCCC--EEEECCCCEEEECCCCEEEEEECc
Confidence 46888888999886555433 4899999999999874 3455 689999999999999998887764
No 126
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=97.66 E-value=0.00096 Score=52.30 Aligned_cols=131 Identities=17% Similarity=0.179 Sum_probs=85.3
Q ss_pred CCCceEEEEeeccccC-CCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeE-EEEEEEeCCCcEEEEE----EcCC
Q 041665 59 DPPIFRVSKASMAEFP-ALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGI-LEVGFIDTTNKLYTQT----LQIG 132 (206)
Q Consensus 59 ~~~g~~v~~~~~~~~P-~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~-~~~~~~~~~~~~~~~~----L~~G 132 (206)
.|-||..+......-+ .-.....+....-+.+|....||.. +++|+.|...|. +++.+..++|+..+.. +.+|
T Consensus 26 HPEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv-~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~G 104 (170)
T 1yud_A 26 HVEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRL-TADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAG 104 (170)
T ss_dssp CTTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEEC-SSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTT
T ss_pred CCCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEc-CCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccC
Confidence 4568877776665411 1111224667777889998788888 579999999998 4888888888765555 5678
Q ss_pred CE--EEECCCCeEEEEeCCCCccEEEEEEecCCCcceeeechhhhcCCCCHHHHHHHcCCCHHHHHHH
Q 041665 133 DM--FVFPKGLVHYQYNSKANQPAAAISAFGSASAGTVSVPTTVFATGIDENILAKAFKTDVTTIQKI 198 (206)
Q Consensus 133 D~--~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg~~~~~~~~f~~~~p~~vla~~f~~~~~~v~~l 198 (206)
+. ++||+|..+..++.+.+ -+.+-++.. ||+..-. |. -.+.+-|.+.|---.+.|++|
T Consensus 105 e~pQ~vVP~G~wqaa~~~~g~-~~LV~C~Va---PGF~f~d---fe-l~~~~~L~~~~P~~~~~I~~l 164 (170)
T 1yud_A 105 ERPQFLVPKGCIFGSAMNQDG-FSLVGCMVS---PGFTFDD---FE-LFSQEALLAMYPQHKAVVQKL 164 (170)
T ss_dssp EESCEEECTTCEEEEEESSSS-EEEEEEEES---SCCCGGG---CC-BCBHHHHHHSCCTTHHHHTTS
T ss_pred ceeEEEECCCCEEEEEECCCC-cEEEEEEEC---CCccCCc---eE-EcCHHHHHhHCchhHHHHHHh
Confidence 98 99999999999998325 555555554 5542211 11 133455555565555555544
No 127
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.61 E-value=0.00023 Score=58.75 Aligned_cols=65 Identities=9% Similarity=0.050 Sum_probs=50.2
Q ss_pred eEEEEEEEecCCCc--CCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeC
Q 041665 80 SVSTAILQFPAGAI--NPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNS 148 (206)
Q Consensus 80 gi~~~~~~l~pg~~--~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~ 148 (206)
++-+....+..... .++|||.. -|++||.+|+++ .++++.. ..+.+++||++++|+|.+|.+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~v~~G~~~-~i~~~~~--~~~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 6 SFQTNVYRMSKFDTYIFNNLYIND-YKMFWIDSGIAK-LIDKNCL--VSYEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp TEEEEEEEECTTCEEEEEEEECSS-CEEEEESSSCEE-EEETTTT--EEEEECTTEEEEECTTCEEEEEEE
T ss_pred hhhhhhhhhhcccchhccHhhhcc-eEEEEEecCceE-EECCccc--eeEEEcCCCEEEEcCCCceeeccc
Confidence 34555566666553 47899965 999999999999 7664311 158999999999999999999765
No 128
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=97.45 E-value=0.00058 Score=56.98 Aligned_cols=72 Identities=18% Similarity=0.277 Sum_probs=55.1
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEE--CCCCeEEEEeCCCCccEEEEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVF--PKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~--P~g~~H~~~N~g~~~~a~~i~ 158 (206)
+....+.||.-+++|.|.+-+.+.||++|+++-. |..|. ..++++||+-++ -+|+.|...|..+++++.++-
T Consensus 66 ln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQ 139 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYR--DSEGN--HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQ 139 (256)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEESEEEEE--ETTSC--EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEE
T ss_pred ccccccCCCCccCCcCCCCcEEEEEEEeeEEEEE--eCCCC--EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEE
Confidence 4566788998889999988555889999998875 44454 689999999999 556899999976532555443
No 129
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=97.35 E-value=0.0021 Score=50.98 Aligned_cols=63 Identities=17% Similarity=0.213 Sum_probs=51.5
Q ss_pred cCCCcCCCccC--CCCcEEEEEEeeEE-EEEEEeCC-----CcEEEEEEcC--CCEEEECCCCeEEEEeCCCC
Q 041665 89 PAGAINPPHTH--PRSAELLFVVSGIL-EVGFIDTT-----NKLYTQTLQI--GDMFVFPKGLVHYQYNSKAN 151 (206)
Q Consensus 89 ~pg~~~~~H~H--~~a~E~~yVl~G~~-~~~~~~~~-----~~~~~~~L~~--GD~~~~P~g~~H~~~N~g~~ 151 (206)
.+|....+|+| ....++++|++|++ .+.+..+. |+.....|.+ +..++||+|..|.+.+.+++
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE 128 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 37888899999 77799999999997 44444443 4677888876 58999999999999999876
No 130
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=97.33 E-value=0.0016 Score=48.57 Aligned_cols=62 Identities=19% Similarity=0.156 Sum_probs=51.4
Q ss_pred CCCcCCCc----cCCCCcEEEEEEeeEEEEEEEeCCCc---EEEEEEcCCCEEEECCCCeEEEEeCCCC
Q 041665 90 AGAINPPH----THPRSAELLFVVSGILEVGFIDTTNK---LYTQTLQIGDMFVFPKGLVHYQYNSKAN 151 (206)
Q Consensus 90 pg~~~~~H----~H~~a~E~~yVl~G~~~~~~~~~~~~---~~~~~L~~GD~~~~P~g~~H~~~N~g~~ 151 (206)
|++..+.| +|++..+.+.|++|++++...+++|. .......+|+..++|++.+|+++..++.
T Consensus 23 P~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd 91 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDD 91 (127)
T ss_dssp CGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTT
T ss_pred hHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCC
Confidence 56777889 59888899999999999986665554 3567889999999999999999986554
No 131
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=97.31 E-value=0.0026 Score=50.48 Aligned_cols=63 Identities=14% Similarity=0.144 Sum_probs=51.5
Q ss_pred cCCCcCCCccC--CCCcEEEEEEeeEE-EEEEEeCC-----CcEEEEEEcC--CCEEEECCCCeEEEEeCCCC
Q 041665 89 PAGAINPPHTH--PRSAELLFVVSGIL-EVGFIDTT-----NKLYTQTLQI--GDMFVFPKGLVHYQYNSKAN 151 (206)
Q Consensus 89 ~pg~~~~~H~H--~~a~E~~yVl~G~~-~~~~~~~~-----~~~~~~~L~~--GD~~~~P~g~~H~~~N~g~~ 151 (206)
.+|....+|+| ....++++|++|++ .+.+..+. |+.....|.+ +..++||+|..|.+.+.+++
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 129 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY 129 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC
Confidence 47888899999 67799999999997 45554443 4677888887 57999999999999999876
No 132
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=97.23 E-value=0.0018 Score=53.44 Aligned_cols=73 Identities=19% Similarity=0.287 Sum_probs=55.9
Q ss_pred EEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEE--CCCCeEEEEeCCCCccEEEEE
Q 041665 82 STAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVF--PKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 82 ~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~--P~g~~H~~~N~g~~~~a~~i~ 158 (206)
.+....+.||.-+++|.|.+-+.+.||++|+++-. |.-|. ..++++||+-++ -+|+.|...|..++++...+-
T Consensus 42 v~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQ 116 (242)
T 1tq5_A 42 VINDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DSMGN--KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQ 116 (242)
T ss_dssp EEEEEEECTTCEEEEEEECSCEEEEEEEESEEEEE--ESSSC--EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEE
T ss_pred eeccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eCCCC--cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEE
Confidence 34466788988889999988666999999998875 44344 689999999999 667999999976421555443
No 133
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=97.23 E-value=0.0029 Score=51.91 Aligned_cols=79 Identities=20% Similarity=0.262 Sum_probs=59.7
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEee---EEEEEEEeCC-------------CcEE------EEEEcCCCEEEE
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSG---ILEVGFIDTT-------------NKLY------TQTLQIGDMFVF 137 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G---~~~~~~~~~~-------------~~~~------~~~L~~GD~~~~ 137 (206)
.+.--.+.+.||+..|.|.|+.-.|-+++.-| .+++...+++ |+.+ ...|+||+.+-+
T Consensus 105 ~YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 105 CYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICL 184 (246)
T ss_dssp CEEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEE
T ss_pred cceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEec
Confidence 56777888999999999999999999999998 4444433322 2222 458999999999
Q ss_pred CCCCeEEEEeCCC-CccEEEEEE
Q 041665 138 PKGLVHYQYNSKA-NQPAAAISA 159 (206)
Q Consensus 138 P~g~~H~~~N~g~-~~~a~~i~~ 159 (206)
++|+.|+++..+. + ++++-.+
T Consensus 185 ~Pg~~H~F~ae~g~G-~vligEV 206 (246)
T 3kmh_A 185 PPGLYHSFWAEAGFG-DVLVGEV 206 (246)
T ss_dssp CTTEEEEEEECTTSC-CEEEEEE
T ss_pred CCCCEEEEEecCCCc-cEEEEEc
Confidence 9999999998766 3 4554443
No 134
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=97.23 E-value=0.0014 Score=52.52 Aligned_cols=64 Identities=13% Similarity=0.177 Sum_probs=52.4
Q ss_pred EecCCCcCCCccCCCCcEEEEEEe-eEEEEEEEeCC-----CcEEEEEEcCCCEEEECCCCeEEEEeCCCC
Q 041665 87 QFPAGAINPPHTHPRSAELLFVVS-GILEVGFIDTT-----NKLYTQTLQIGDMFVFPKGLVHYQYNSKAN 151 (206)
Q Consensus 87 ~l~pg~~~~~H~H~~a~E~~yVl~-G~~~~~~~~~~-----~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~ 151 (206)
.-.+|....+|.|+ ..++++|++ |++...+++-- |+.....|.++..++||+|..|.+.+.++.
T Consensus 66 ~s~~GvlRGlH~h~-q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~ 135 (197)
T 1nxm_A 66 FSRKNVLRGLHAEP-WDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF 135 (197)
T ss_dssp EEETTBEEEEEECS-SCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE
T ss_pred ECCCCCcceeeecc-cceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC
Confidence 33677788999995 599999999 99644444432 567889999999999999999999999866
No 135
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.20 E-value=0.00068 Score=55.37 Aligned_cols=64 Identities=16% Similarity=0.141 Sum_probs=52.2
Q ss_pred EEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEE
Q 041665 82 STAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 82 ~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~ 158 (206)
.+..++++||...+.|.| ...|+ +||+|++. ++ ...+.+|+.+..|.|..|.... |++ .|.++.
T Consensus 147 ~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~----d~-----~~~~~~GsWlR~P~gs~h~~~a-g~~-g~~i~~ 210 (223)
T 3o14_A 147 TVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----VN-----DEVLGRNAWLRLPEGEALSATA-GAR-GAKIWM 210 (223)
T ss_dssp EEEEEEECTTCEEEECCS-SCEEE-EEEEEEEE----ET-----TEEECTTEEEEECTTCCEEEEE-EEE-EEEEEE
T ss_pred EEEEEEECCCCccCCCCC-CcEEE-EEEEeEEE----EC-----CceECCCeEEEeCCCCccCcEE-CCC-CeEEEE
Confidence 456677899999999999 66886 99999864 33 3689999999999999999988 555 576664
No 136
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=97.19 E-value=0.0046 Score=49.51 Aligned_cols=69 Identities=17% Similarity=0.207 Sum_probs=53.0
Q ss_pred ecCCCcCCCccCCC---CcEEEEEEeeEE-EEEEEeCC-----CcEEEEEEcC--CCEEEECCCCeEEEEeCCCCccEEE
Q 041665 88 FPAGAINPPHTHPR---SAELLFVVSGIL-EVGFIDTT-----NKLYTQTLQI--GDMFVFPKGLVHYQYNSKANQPAAA 156 (206)
Q Consensus 88 l~pg~~~~~H~H~~---a~E~~yVl~G~~-~~~~~~~~-----~~~~~~~L~~--GD~~~~P~g~~H~~~N~g~~~~a~~ 156 (206)
-.+|....+|+|.. ..++++|++|++ .+.++.+. |+.....|.+ +..++||+|..|.+.+.+++ ...+
T Consensus 72 s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~-a~~l 150 (196)
T 1wlt_A 72 SRKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS-IVIY 150 (196)
T ss_dssp ECTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE-EEEE
T ss_pred CCCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEE
Confidence 35777889999964 589999999999 44444332 4577888886 68999999999999999876 3333
Q ss_pred E
Q 041665 157 I 157 (206)
Q Consensus 157 i 157 (206)
+
T Consensus 151 y 151 (196)
T 1wlt_A 151 F 151 (196)
T ss_dssp E
T ss_pred E
Confidence 3
No 137
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=97.19 E-value=0.0022 Score=55.47 Aligned_cols=72 Identities=21% Similarity=0.259 Sum_probs=54.9
Q ss_pred EEecC-CCcCCCccCCCCcEEEEEEeeEEEEEEE-eCC---------------------------------CcEEEEEEc
Q 041665 86 LQFPA-GAINPPHTHPRSAELLFVVSGILEVGFI-DTT---------------------------------NKLYTQTLQ 130 (206)
Q Consensus 86 ~~l~p-g~~~~~H~H~~a~E~~yVl~G~~~~~~~-~~~---------------------------------~~~~~~~L~ 130 (206)
+.+.| |+..++|+.+. +-+++.++|+=++.+. .++ ...+..+|+
T Consensus 145 ~~~gp~g~~~~~H~D~~-dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDAY-TNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECSS-EEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECCh-hcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 45555 77789999865 7888889999888887 321 113678999
Q ss_pred CCCEEEECCCCeEEEEeCCCCccEEEEEE
Q 041665 131 IGDMFVFPKGLVHYQYNSKANQPAAAISA 159 (206)
Q Consensus 131 ~GD~~~~P~g~~H~~~N~g~~~~a~~i~~ 159 (206)
+||++|+|+|.+|+.++.+++ ...-+++
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~-~slsvsi 251 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQAT-LALNITF 251 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCE-EEEEEEE
T ss_pred CCcEEEeCCCccEEEEECCCC-ceEEEEE
Confidence 999999999999999998655 4444443
No 138
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=97.14 E-value=0.003 Score=50.91 Aligned_cols=70 Identities=19% Similarity=0.235 Sum_probs=53.8
Q ss_pred cCCCcCCCccCC---CCcEEEEEEeeEEEEEEEe-CC-----CcEEEEEEcC--CCEEEECCCCeEEEEeCCCCccEEEE
Q 041665 89 PAGAINPPHTHP---RSAELLFVVSGILEVGFID-TT-----NKLYTQTLQI--GDMFVFPKGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 89 ~pg~~~~~H~H~---~a~E~~yVl~G~~~~~~~~-~~-----~~~~~~~L~~--GD~~~~P~g~~H~~~N~g~~~~a~~i 157 (206)
.+|....+|+|. ...++++|++|++.-.++| +. |+.....|.+ +..++||+|..|.+.+.+++ ...++
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~-a~~~Y 156 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH-TIVMY 156 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS-EEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC-EEEEE
Confidence 578888999995 3699999999996444443 22 4667888886 78999999999999999876 44444
Q ss_pred EE
Q 041665 158 SA 159 (206)
Q Consensus 158 ~~ 159 (206)
.+
T Consensus 157 ~~ 158 (205)
T 3ryk_A 157 KV 158 (205)
T ss_dssp EE
T ss_pred Ec
Confidence 43
No 139
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=97.05 E-value=0.0071 Score=47.86 Aligned_cols=63 Identities=13% Similarity=0.123 Sum_probs=50.8
Q ss_pred cCCCcCCCccCC---CCcEEEEEEeeEE-EEEEEeCC-----CcEEEEEEcC--CCEEEECCCCeEEEEeCCCC
Q 041665 89 PAGAINPPHTHP---RSAELLFVVSGIL-EVGFIDTT-----NKLYTQTLQI--GDMFVFPKGLVHYQYNSKAN 151 (206)
Q Consensus 89 ~pg~~~~~H~H~---~a~E~~yVl~G~~-~~~~~~~~-----~~~~~~~L~~--GD~~~~P~g~~H~~~N~g~~ 151 (206)
.+|....+|+|. ...++++|++|++ .+.+.... |+.....|.+ +..++||+|..|.+.+.+++
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY 128 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 378888999995 6699999999997 44444432 4577888887 47999999999999999876
No 140
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.97 E-value=0.0014 Score=52.34 Aligned_cols=66 Identities=20% Similarity=0.318 Sum_probs=50.1
Q ss_pred EEEecCCC-cCCCccCCCCcEEEEEEeeEEEEEEEeCCC----------------------------------cEEEEEE
Q 041665 85 ILQFPAGA-INPPHTHPRSAELLFVVSGILEVGFIDTTN----------------------------------KLYTQTL 129 (206)
Q Consensus 85 ~~~l~pg~-~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~----------------------------------~~~~~~L 129 (206)
.+-+.+++ ..++|..+. .-+..+++|+=++.+..+.. +..+.+|
T Consensus 127 ~~wiG~~gs~t~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 205 (235)
T 4gjz_A 127 NAWFGPQGTISPLHQDPQ-QNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCIL 205 (235)
T ss_dssp EEEEECTTCEEEEECCSS-EEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEE
T ss_pred EEEEeCCCCCceeeeccc-cceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEE
Confidence 34455544 557787765 78888999999988864310 2357899
Q ss_pred cCCCEEEECCCCeEEEEeCCCC
Q 041665 130 QIGDMFVFPKGLVHYQYNSKAN 151 (206)
Q Consensus 130 ~~GD~~~~P~g~~H~~~N~g~~ 151 (206)
++||+++||+|..|+.+|.+..
T Consensus 206 ~pGD~LyiP~gW~H~V~~l~~s 227 (235)
T 4gjz_A 206 SPGEILFIPVKYWHYVRALDLS 227 (235)
T ss_dssp CTTCEEEECTTCEEEEEESSSE
T ss_pred CCCCEEEeCCCCcEEEEECCCE
Confidence 9999999999999999998644
No 141
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.89 E-value=0.012 Score=47.48 Aligned_cols=68 Identities=13% Similarity=0.152 Sum_probs=52.3
Q ss_pred cCCCcCCCccCCC---CcEEEEEEeeEEEEEEEe-CC-----CcEEEEEEcCC--CEEEECCCCeEEEEeCCCCccEEEE
Q 041665 89 PAGAINPPHTHPR---SAELLFVVSGILEVGFID-TT-----NKLYTQTLQIG--DMFVFPKGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 89 ~pg~~~~~H~H~~---a~E~~yVl~G~~~~~~~~-~~-----~~~~~~~L~~G--D~~~~P~g~~H~~~N~g~~~~a~~i 157 (206)
.+|....+|+|.. ..++++|++|++.-.+++ .. |+.....|.+. ..++||+|..|.+.+.+++ ...++
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD-TVMSY 133 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC-eEEEE
Confidence 5777889999954 689999999997544343 22 45778888874 7999999999999999877 43334
No 142
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.88 E-value=0.012 Score=47.77 Aligned_cols=68 Identities=13% Similarity=0.005 Sum_probs=52.6
Q ss_pred cCCCcCCCccCCC---CcEEEEEEeeEEE-EEEEeCC-----CcEEEEEEcCC--CEEEECCCCeEEEEeCCCCccEEEE
Q 041665 89 PAGAINPPHTHPR---SAELLFVVSGILE-VGFIDTT-----NKLYTQTLQIG--DMFVFPKGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 89 ~pg~~~~~H~H~~---a~E~~yVl~G~~~-~~~~~~~-----~~~~~~~L~~G--D~~~~P~g~~H~~~N~g~~~~a~~i 157 (206)
.+|....+|+|.. ..++++|++|++. +.+..+. |+.....|.+. ..++||+|..|.+.+.+++ ...++
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~~ly 141 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE-ATLCY 141 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC-eEEEE
Confidence 4788889999964 6899999999974 4444332 45778888875 7999999999999999876 43334
No 143
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=96.87 E-value=0.017 Score=47.15 Aligned_cols=69 Identities=19% Similarity=0.112 Sum_probs=52.6
Q ss_pred cCCCcCCCccCCC---CcEEEEEEeeEEE-EEEEeCC-----CcEEEEEEcCC--CEEEECCCCeEEEEeCCCCccEEEE
Q 041665 89 PAGAINPPHTHPR---SAELLFVVSGILE-VGFIDTT-----NKLYTQTLQIG--DMFVFPKGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 89 ~pg~~~~~H~H~~---a~E~~yVl~G~~~-~~~~~~~-----~~~~~~~L~~G--D~~~~P~g~~H~~~N~g~~~~a~~i 157 (206)
.+|....+|+|.. ..++++|++|++. +.++... |+.....|.+. ..++||+|..|.+.+.+++ ..+++
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~vly 152 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN-STVMY 152 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS-EEEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC-EEEEE
Confidence 5777889999954 5899999999974 4443322 45778888875 7999999999999999877 44444
Q ss_pred E
Q 041665 158 S 158 (206)
Q Consensus 158 ~ 158 (206)
.
T Consensus 153 ~ 153 (225)
T 1upi_A 153 L 153 (225)
T ss_dssp E
T ss_pred e
Confidence 3
No 144
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=96.87 E-value=0.021 Score=45.77 Aligned_cols=77 Identities=10% Similarity=0.040 Sum_probs=57.4
Q ss_pred cCCCcCCCccCC---CCcEEEEEEeeEEEEEEEeC------CCcEEEEEEcC--CCEEEECCCCeEEEEeCCCCccEEEE
Q 041665 89 PAGAINPPHTHP---RSAELLFVVSGILEVGFIDT------TNKLYTQTLQI--GDMFVFPKGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 89 ~pg~~~~~H~H~---~a~E~~yVl~G~~~~~~~~~------~~~~~~~~L~~--GD~~~~P~g~~H~~~N~g~~~~a~~i 157 (206)
.+|....+|.|. ....+++|++|++.-.++|- -|+.....|.+ +..++||+|..|.+.+.+++ ...++
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~-a~~~Y 130 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD-ATLVF 130 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC-eEEEE
Confidence 577788999984 56999999999976655542 15677888887 67999999999999999877 44444
Q ss_pred EEecCCCcc
Q 041665 158 SAFGSASAG 166 (206)
Q Consensus 158 ~~~~s~~pg 166 (206)
-+-+.-+|+
T Consensus 131 ~~t~~Y~p~ 139 (201)
T 4hn1_A 131 LCSSGYAPA 139 (201)
T ss_dssp EESSCCCGG
T ss_pred eCCCCcChh
Confidence 442223454
No 145
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.57 E-value=0.0073 Score=52.27 Aligned_cols=73 Identities=14% Similarity=0.184 Sum_probs=55.1
Q ss_pred EEec-CCCcCCCccCCCCcEEEEEEeeEEEEEEEeCC-----------------------------------CcEEEEEE
Q 041665 86 LQFP-AGAINPPHTHPRSAELLFVVSGILEVGFIDTT-----------------------------------NKLYTQTL 129 (206)
Q Consensus 86 ~~l~-pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~-----------------------------------~~~~~~~L 129 (206)
+.+. +|...++|+.+. .-+..+++|+=++.+..+. -+.++.+|
T Consensus 187 l~iG~~gs~t~~H~D~~-~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQ-QNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCSE-EEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECCh-hcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 4455 455669998876 7888999999888876431 03578999
Q ss_pred cCCCEEEECCCCeEEEEeCCC-CccEEEEEEe
Q 041665 130 QIGDMFVFPKGLVHYQYNSKA-NQPAAAISAF 160 (206)
Q Consensus 130 ~~GD~~~~P~g~~H~~~N~g~-~~~a~~i~~~ 160 (206)
++||++++|+|..|+..|.++ + ..+.+...
T Consensus 266 ~pGD~LyiP~gWwH~V~~l~d~~-~sisvn~w 296 (349)
T 3d8c_A 266 GPGDVLYIPMYWWHHIESLLNGG-ITITVNFW 296 (349)
T ss_dssp CTTCEEEECTTCEEEEEECTTSC-CEEEEEEE
T ss_pred CCCCEEEECCCCcEEEEEcCCCC-cEEEEEEE
Confidence 999999999999999999973 4 45554443
No 146
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=96.20 E-value=0.018 Score=51.44 Aligned_cols=63 Identities=19% Similarity=0.346 Sum_probs=48.5
Q ss_pred EEecCCC-cC-CCccCCCCcEEEEEEeeEEEEEEEeCCC----------------cEEEEEEcCCCEEEECCCCeEEEEe
Q 041665 86 LQFPAGA-IN-PPHTHPRSAELLFVVSGILEVGFIDTTN----------------KLYTQTLQIGDMFVFPKGLVHYQYN 147 (206)
Q Consensus 86 ~~l~pg~-~~-~~H~H~~a~E~~yVl~G~~~~~~~~~~~----------------~~~~~~L~~GD~~~~P~g~~H~~~N 147 (206)
+.+.|++ .. ++|+-.. +-+++.++|+=++.+..+.. ..+..+|++||++|+|+|.+|+.++
T Consensus 143 ~y~~~~g~~g~~~H~D~~-dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s 221 (442)
T 2xdv_A 143 VYITPAGSQGLPPHYDDV-EVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADT 221 (442)
T ss_dssp EEEECTTCBCSCSEECSS-EEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEEC
T ss_pred eEECCCCCCCccceECCc-ceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEe
Confidence 3445555 43 7999754 78888889998888766531 1357899999999999999999998
Q ss_pred CC
Q 041665 148 SK 149 (206)
Q Consensus 148 ~g 149 (206)
.+
T Consensus 222 ~~ 223 (442)
T 2xdv_A 222 PA 223 (442)
T ss_dssp CS
T ss_pred cC
Confidence 75
No 147
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=96.01 E-value=0.016 Score=49.91 Aligned_cols=65 Identities=20% Similarity=0.283 Sum_probs=49.9
Q ss_pred EEecC-CCcCCCccCCCCcEEEEEEeeEEEEEEEeCC------------------------------CcEEEEEEcCCCE
Q 041665 86 LQFPA-GAINPPHTHPRSAELLFVVSGILEVGFIDTT------------------------------NKLYTQTLQIGDM 134 (206)
Q Consensus 86 ~~l~p-g~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~------------------------------~~~~~~~L~~GD~ 134 (206)
+.+.| |+..++|+.+. .-+...++|+=++.+..+. -+.++.+|++||+
T Consensus 171 l~~g~~g~~~~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~ 249 (338)
T 3al5_A 171 FRISSPGLQLWTHYDVM-DNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDV 249 (338)
T ss_dssp EEEECTTCEEEEECCSS-EEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCE
T ss_pred eEECCCCCCccceECCc-ccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCE
Confidence 34444 45568898875 7788889999888776431 0257899999999
Q ss_pred EEECCCCeEEEEeCCCC
Q 041665 135 FVFPKGLVHYQYNSKAN 151 (206)
Q Consensus 135 ~~~P~g~~H~~~N~g~~ 151 (206)
+++|+|..|+..|.+..
T Consensus 250 LyiP~gWwH~v~~l~~s 266 (338)
T 3al5_A 250 LFIPALWFHNVISEEFG 266 (338)
T ss_dssp EEECTTCEEEEEESSCE
T ss_pred EEECCCCeEEEeeCCCE
Confidence 99999999999998544
No 148
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=95.94 E-value=0.016 Score=48.68 Aligned_cols=56 Identities=13% Similarity=0.106 Sum_probs=44.3
Q ss_pred ecCCCcC-CCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCC
Q 041665 88 FPAGAIN-PPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKAN 151 (206)
Q Consensus 88 l~pg~~~-~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~ 151 (206)
+.+|... ..- ..+-++++++|+..+.+.+. ++.|++||++.||++..|.+....+.
T Consensus 214 ~G~Ges~~~~~---~~d~wiWqLEGss~Vt~~~q-----~~~L~~~DsLLIpa~~~y~~~r~~gs 270 (286)
T 2qnk_A 214 YGQGSSEGLRQ---NVDVWLWQLEGSSVVTMGGR-----RLSLAPDDSLLVLAGTSYAWERTQGS 270 (286)
T ss_dssp ECSEEEEECCC---SSCEEEEEEESCEEEEETTE-----EEEECTTEEEEECTTCCEEEEECTTC
T ss_pred EcCCccccccC---cCcEEEEEEcCceEEEECCe-----EEeccCCCEEEecCCCeEEEEecCCe
Confidence 6666543 222 22889999999999887665 89999999999999999999875544
No 149
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=95.82 E-value=0.086 Score=47.64 Aligned_cols=66 Identities=15% Similarity=0.253 Sum_probs=49.9
Q ss_pred EEEecCCCc--CCCccCCCCcEEEEEEeeEEEEEEEeCCC--------------------cEEEEEEcCCCEEEECCCCe
Q 041665 85 ILQFPAGAI--NPPHTHPRSAELLFVVSGILEVGFIDTTN--------------------KLYTQTLQIGDMFVFPKGLV 142 (206)
Q Consensus 85 ~~~l~pg~~--~~~H~H~~a~E~~yVl~G~~~~~~~~~~~--------------------~~~~~~L~~GD~~~~P~g~~ 142 (206)
...+.|++. .++|+-+. +-+++-++|+=++.+..+.. .....+|++||++|+|+|.+
T Consensus 167 N~Y~tp~Gs~g~~pH~D~~-DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~ 245 (489)
T 4diq_A 167 NVYLTPPNSQGFAPHYDDI-EAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFI 245 (489)
T ss_dssp EEEEECSSBCCSCCBCCSS-EEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCE
T ss_pred eEEecCCCcccccCccCCc-ceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCc
Confidence 345556554 47998865 77777788888888775421 12578999999999999999
Q ss_pred EEEEeCCCC
Q 041665 143 HYQYNSKAN 151 (206)
Q Consensus 143 H~~~N~g~~ 151 (206)
|+.++.+++
T Consensus 246 H~~~s~~~~ 254 (489)
T 4diq_A 246 HQAECQDGV 254 (489)
T ss_dssp EEEEBCSSC
T ss_pred eEEEecCCC
Confidence 999998754
No 150
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=95.59 E-value=0.039 Score=45.92 Aligned_cols=87 Identities=15% Similarity=0.128 Sum_probs=64.1
Q ss_pred CCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECC
Q 041665 60 PPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPK 139 (206)
Q Consensus 60 ~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~ 139 (206)
...++.+.++. .+-|-+-.++.++|+-..|+-.|..-.| +||++|++.++ ...|.+|...++|+
T Consensus 76 ~~~gs~RlLs~------~d~GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~G---------~~~l~~h~Y~f~Pa 139 (303)
T 2qdr_A 76 IAPGSRRLLTW------HDSGASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQLG---------EWQLNKHSYSFIPA 139 (303)
T ss_dssp SCCEEEEEEEE------CTTSCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEET---------TEEECTTEEEEECT
T ss_pred cCccceeeccc------CCCCcceEEEEecCCCCCCCcccccceE-EEEEEeEEEeC---------CEEecCCceEEecC
Confidence 34455555433 3346688999999999988866655577 89999998773 36899999999999
Q ss_pred CCeE-EEEeCCCCccEEEEEEecCC
Q 041665 140 GLVH-YQYNSKANQPAAAISAFGSA 163 (206)
Q Consensus 140 g~~H-~~~N~g~~~~a~~i~~~~s~ 163 (206)
|+.- .++..|.+ ++.++...+..
T Consensus 140 GV~~~~~kv~~~~-g~~iL~fe~g~ 163 (303)
T 2qdr_A 140 GVRIGSWKVLGGE-EAEILWMENGS 163 (303)
T ss_dssp TCCBCCEEEETTS-CEEEEEEECSS
T ss_pred CCccCceeecCCC-CcEEEEEecCC
Confidence 9854 55666777 78888774333
No 151
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=95.54 E-value=0.074 Score=44.55 Aligned_cols=90 Identities=20% Similarity=0.238 Sum_probs=60.9
Q ss_pred CceEEEEeecc-ccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECC
Q 041665 61 PIFRVSKASMA-EFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPK 139 (206)
Q Consensus 61 ~g~~v~~~~~~-~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~ 139 (206)
.|..++.+... ....+.-. +-+.. ...++.-+++|-|.+-+-+.||++|+++-. |.-|. ...+++||+-++-+
T Consensus 20 ~g~~v~R~~~~~~~~~~gpf-~~ld~-~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~--DS~Gn--~~~i~~GdvQwMtA 93 (277)
T 2p17_A 20 PIHRSGSVLEPGNWQEYDPF-LLLME-DIFERGTFDVHPHRGIETVTYVISGELEHF--DSKAG--HSTLGPGDVQWMTA 93 (277)
T ss_dssp TTEEEEEEECSSCHHHHTTE-EEEEE-EEECTTCCCCEEECSEEEEEEEEESCEEEE--ETTTE--EEEECTTCEEEEEC
T ss_pred CCeEEeecCCcccccccCCE-EEEec-CCCCCCCCCCCCCCCcEEEEEEEEeEEEEe--eCCCC--ceEECCCeEEEEeC
Confidence 56666665432 11111111 23344 667888899999987555899999998774 44455 68999999887776
Q ss_pred --CCeEEEEeCCCCccEEEE
Q 041665 140 --GLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 140 --g~~H~~~N~g~~~~a~~i 157 (206)
|+.|.-.|..++ +...+
T Consensus 94 G~GI~HsE~~~~~~-~~~~l 112 (277)
T 2p17_A 94 GRGVVHKEDPASGS-TVHSL 112 (277)
T ss_dssp TTCEEEEEEECTTC-CEEEE
T ss_pred CCCEEEEeecCCCC-CEEEE
Confidence 579999998766 65543
No 152
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=95.33 E-value=0.044 Score=49.04 Aligned_cols=62 Identities=11% Similarity=0.080 Sum_probs=46.7
Q ss_pred CCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecC
Q 041665 95 PPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGS 162 (206)
Q Consensus 95 ~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s 162 (206)
..-...+++|++++.+|++++.- +-| ...+++||+++||+|+.+++.-.+.. ...++.++..
T Consensus 171 ~~f~NaDGD~Livpq~G~l~i~T--EfG---~L~v~pgei~VIPRGi~frv~l~~p~-Rgyi~E~~g~ 232 (471)
T 1eyb_A 171 RCFYNSDGDFLIVPQKGNLLIYT--EFG---KMLVQPNEICVIQRGMRFSIDVFEET-RGYILEVYGV 232 (471)
T ss_dssp EEEEESSEEEEEEEEESCEEEEE--TTE---EEEECTTEEEEECTTCCEEEECSSSE-EEEEEEEESC
T ss_pred ceeecCCCCEEEEEEeCCEEEEE--ecc---cEEeccCCEEEECCccEEEEeeCCCc-eEEEEEccCC
Confidence 34556788999999999998863 334 57899999999999999999876533 3444445544
No 153
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=95.22 E-value=0.062 Score=46.27 Aligned_cols=75 Identities=17% Similarity=0.094 Sum_probs=52.9
Q ss_pred EecC-CCcCCCccCCCCc-EEEEEEeeEEEEEEEeCC---------------------------------------CcEE
Q 041665 87 QFPA-GAINPPHTHPRSA-ELLFVVSGILEVGFIDTT---------------------------------------NKLY 125 (206)
Q Consensus 87 ~l~p-g~~~~~H~H~~a~-E~~yVl~G~~~~~~~~~~---------------------------------------~~~~ 125 (206)
-+.+ |...++|+++... -+..++.|+=++.+..++ .+.+
T Consensus 177 ~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~~ 256 (336)
T 3k2o_A 177 VMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKPL 256 (336)
T ss_dssp EEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCCE
T ss_pred EECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCceE
Confidence 3444 4556889887533 588899998777766431 0235
Q ss_pred EEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecC
Q 041665 126 TQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGS 162 (206)
Q Consensus 126 ~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s 162 (206)
..++++||++++|+|..|+..|.++. -++-....+.
T Consensus 257 ~~~l~pGd~l~iP~gw~H~v~~~~~s-isv~~~f~~~ 292 (336)
T 3k2o_A 257 EILQKPGETVFVPGGWWHVVLNLDTT-IAITQNFASS 292 (336)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSCE-EEEEEEECCT
T ss_pred EEEECCCCEEEeCCCCcEEEecCCCe-EEEEcccCCc
Confidence 78999999999999999999999766 4444433333
No 154
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=95.16 E-value=0.049 Score=49.28 Aligned_cols=64 Identities=19% Similarity=0.186 Sum_probs=50.3
Q ss_pred ecCCCcCCCccCCCCc-EEEEEEeeEEEEEEEeCC-------------------------CcEEEEEEcCCCEEEECCCC
Q 041665 88 FPAGAINPPHTHPRSA-ELLFVVSGILEVGFIDTT-------------------------NKLYTQTLQIGDMFVFPKGL 141 (206)
Q Consensus 88 l~pg~~~~~H~H~~a~-E~~yVl~G~~~~~~~~~~-------------------------~~~~~~~L~~GD~~~~P~g~ 141 (206)
-++|...+.|..+... -+..+++|+=++.+..+. .+.+..++++||+++||+|.
T Consensus 273 G~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGW 352 (488)
T 3kv5_D 273 GVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGW 352 (488)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTC
T ss_pred cCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCc
Confidence 3456667999997644 356899999988887542 13468899999999999999
Q ss_pred eEEEEeCCCC
Q 041665 142 VHYQYNSKAN 151 (206)
Q Consensus 142 ~H~~~N~g~~ 151 (206)
.|+..|..+.
T Consensus 353 wH~V~nleds 362 (488)
T 3kv5_D 353 IHAVLTSQDC 362 (488)
T ss_dssp EEEEEEEEEE
T ss_pred eEEeeCCCCe
Confidence 9999998655
No 155
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=95.09 E-value=0.12 Score=43.68 Aligned_cols=89 Identities=18% Similarity=0.237 Sum_probs=60.7
Q ss_pred ceEEEEeeccccCCCCCCe--EEEEEEEecCCCcCCCccCCCCcEEEEEE-eeEEEEEEEeCCCcEEEEEEcCCCEEEEC
Q 041665 62 IFRVSKASMAEFPALNGQS--VSTAILQFPAGAINPPHTHPRSAELLFVV-SGILEVGFIDTTNKLYTQTLQIGDMFVFP 138 (206)
Q Consensus 62 g~~v~~~~~~~~P~l~~~g--i~~~~~~l~pg~~~~~H~H~~a~E~~yVl-~G~~~~~~~~~~~~~~~~~L~~GD~~~~P 138 (206)
|..|+.+.. .|.....+ +-+....+.|+.-+++|-|.+-+-+.||+ +|+++-. |.-|. ..++++||+-++-
T Consensus 21 G~~v~R~~~--~~~~~~~gpf~~ld~~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~--DS~Gn--~~~i~~GdvQwMt 94 (290)
T 1j1l_A 21 GARVRRSIG--RPELKNLDPFLLFDEFKGGRPGGFPDHPHRGFETVSYLLEGGSMAHE--DFCGH--TGKMNPGDLQWMT 94 (290)
T ss_dssp TEEEEECTT--STTCCCCTTEEEEEEEEECTTCBEEEEEEBSEEEEEEECSSSCEEEE--ETTSC--EEEECTTCEEEEE
T ss_pred CeEEEEeCC--CccccccCcEEEEEccccCCCCCCCCCCCCCeEEEEEECcceEEEEe--eCCCC--ceEECCCcEEEEe
Confidence 456665442 22222222 34555667888778999998744488999 9998875 44454 6899999987776
Q ss_pred C--CCeEEEEeCCCCccEEEE
Q 041665 139 K--GLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 139 ~--g~~H~~~N~g~~~~a~~i 157 (206)
+ |+.|.-.|..++ +...+
T Consensus 95 AG~GI~HsE~~~~~~-~~~~l 114 (290)
T 1j1l_A 95 AGRGILHAEMPCSEE-PAHGL 114 (290)
T ss_dssp CTTCEEEEEEECSSS-CEEEE
T ss_pred CCCCEEEEeEcCCCC-CEEEE
Confidence 5 579999998655 55544
No 156
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=95.00 E-value=0.12 Score=37.98 Aligned_cols=47 Identities=13% Similarity=0.072 Sum_probs=37.6
Q ss_pred CcEEEEEEeeEEEEEEEeCCCc---EEEEEEcCCCEEEECCCCeEEEEeC
Q 041665 102 SAELLFVVSGILEVGFIDTTNK---LYTQTLQIGDMFVFPKGLVHYQYNS 148 (206)
Q Consensus 102 a~E~~yVl~G~~~~~~~~~~~~---~~~~~L~~GD~~~~P~g~~H~~~N~ 148 (206)
...-+.|++|++++...+++|. .....+.+|+..++|+..+|++...
T Consensus 38 tWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~s 87 (119)
T 3dl3_A 38 VFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELS 87 (119)
T ss_dssp EEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEEC
T ss_pred EEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEEC
Confidence 4566889999999987654442 2467899999999999999999933
No 157
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=94.88 E-value=0.078 Score=47.50 Aligned_cols=76 Identities=18% Similarity=0.152 Sum_probs=55.1
Q ss_pred ecCCCcCCCccCCCCc-EEEEEEeeEEEEEEEeCC-------------------------CcEEEEEEcCCCEEEECCCC
Q 041665 88 FPAGAINPPHTHPRSA-ELLFVVSGILEVGFIDTT-------------------------NKLYTQTLQIGDMFVFPKGL 141 (206)
Q Consensus 88 l~pg~~~~~H~H~~a~-E~~yVl~G~~~~~~~~~~-------------------------~~~~~~~L~~GD~~~~P~g~ 141 (206)
-++|...+.|..+..+ -+..+++|+=++.+..+. .+.+..++++||+++||.|.
T Consensus 203 Gp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsGW 282 (451)
T 2yu1_A 203 SVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSGW 282 (451)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTTC
T ss_pred ccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCCc
Confidence 3456667999987644 467899999888876542 13468899999999999999
Q ss_pred eEEEEeCCCCccEEEEEEecCCC
Q 041665 142 VHYQYNSKANQPAAAISAFGSAS 164 (206)
Q Consensus 142 ~H~~~N~g~~~~a~~i~~~~s~~ 164 (206)
.|...|..++ -++---.+++.|
T Consensus 283 wH~V~nleds-Iait~NF~~~~n 304 (451)
T 2yu1_A 283 IHAVYTPTDT-LVFGGNFLHSFN 304 (451)
T ss_dssp EEEEECSSCE-EEEEEEECCSSS
T ss_pred eEEEecCCCe-EEEeeeeCCccc
Confidence 9999998765 333333444444
No 158
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=94.82 E-value=0.067 Score=46.74 Aligned_cols=64 Identities=17% Similarity=0.210 Sum_probs=50.2
Q ss_pred ecCCCcCCCccCCCCcE-EEEEEeeEEEEEEEeCC-------------------------CcEEEEEEcCCCEEEECCCC
Q 041665 88 FPAGAINPPHTHPRSAE-LLFVVSGILEVGFIDTT-------------------------NKLYTQTLQIGDMFVFPKGL 141 (206)
Q Consensus 88 l~pg~~~~~H~H~~a~E-~~yVl~G~~~~~~~~~~-------------------------~~~~~~~L~~GD~~~~P~g~ 141 (206)
-++|...+.|..+..+- +..+++|+=++.+..+. .+.++.++++||++++|+|.
T Consensus 154 Gp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGW 233 (371)
T 3k3o_A 154 SVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGW 233 (371)
T ss_dssp ECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTC
T ss_pred cCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCC
Confidence 34555679999977554 56799999888877432 13578999999999999999
Q ss_pred eEEEEeCCCC
Q 041665 142 VHYQYNSKAN 151 (206)
Q Consensus 142 ~H~~~N~g~~ 151 (206)
.|+..|..++
T Consensus 234 wH~V~nledS 243 (371)
T 3k3o_A 234 IHAVLTPVDC 243 (371)
T ss_dssp EEEEEEEEEE
T ss_pred eEEEecCCCe
Confidence 9999998655
No 159
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=94.63 E-value=0.069 Score=42.63 Aligned_cols=70 Identities=17% Similarity=0.255 Sum_probs=49.3
Q ss_pred EEEEEEecCCCcCCCccCCCCcEEEE----EEee-EEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEE
Q 041665 82 STAILQFPAGAINPPHTHPRSAELLF----VVSG-ILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAA 156 (206)
Q Consensus 82 ~~~~~~l~pg~~~~~H~H~~a~E~~y----Vl~G-~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~ 156 (206)
++....+.||+.+++|..+....+-+ ++-. ...+.++++ .+..++|+.++|.-...|...|.+++ +-++
T Consensus 103 ~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V~~~-----~~~w~eGe~~~fDds~~Hev~N~~d~-~Rvv 176 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCANE-----TKTWEEGKVLIFDDSFEHEVWQDASS-FRLI 176 (197)
T ss_dssp EEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEETTE-----EECCCBTCEEEECTTSCEEEEECSSS-CEEE
T ss_pred eEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEECCE-----EEEeeCCcEEEEcCCeEEEEEECCCC-CEEE
Confidence 56667899999999998875333322 1111 233333332 78999999999999999999999987 5444
Q ss_pred E
Q 041665 157 I 157 (206)
Q Consensus 157 i 157 (206)
+
T Consensus 177 L 177 (197)
T 3rcq_A 177 F 177 (197)
T ss_dssp E
T ss_pred E
Confidence 4
No 160
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=94.55 E-value=0.12 Score=46.30 Aligned_cols=63 Identities=17% Similarity=0.217 Sum_probs=49.2
Q ss_pred cCCCcCCCccCCCCc-EEEEEEeeEEEEEEEeCC-------------------------CcEEEEEEcCCCEEEECCCCe
Q 041665 89 PAGAINPPHTHPRSA-ELLFVVSGILEVGFIDTT-------------------------NKLYTQTLQIGDMFVFPKGLV 142 (206)
Q Consensus 89 ~pg~~~~~H~H~~a~-E~~yVl~G~~~~~~~~~~-------------------------~~~~~~~L~~GD~~~~P~g~~ 142 (206)
++|...+.|..+..+ -+..|++|+=++.+..+. .+.+..++++||++++|+|..
T Consensus 239 ~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWw 318 (447)
T 3kv4_A 239 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 318 (447)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCCe
Confidence 445566889886644 366899999888877442 134688999999999999999
Q ss_pred EEEEeCCCC
Q 041665 143 HYQYNSKAN 151 (206)
Q Consensus 143 H~~~N~g~~ 151 (206)
|...|..+.
T Consensus 319 H~V~nleds 327 (447)
T 3kv4_A 319 HAVLTPVDC 327 (447)
T ss_dssp EEEEESSCE
T ss_pred EEEecCCCE
Confidence 999999665
No 161
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=94.43 E-value=0.017 Score=48.80 Aligned_cols=67 Identities=18% Similarity=0.139 Sum_probs=47.5
Q ss_pred EEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCC---------CcEEEEEEcCCCEEEECCCCeEEEEeCCCC
Q 041665 81 VSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTT---------NKLYTQTLQIGDMFVFPKGLVHYQYNSKAN 151 (206)
Q Consensus 81 i~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~---------~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~ 151 (206)
+..+|+.+.||+.+.+|.=+ -|+....+|..++.+.-.. |+ .+.+++|+++++....+|+..|.|+.
T Consensus 91 l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~--~~~m~~GE~w~~d~~~~H~v~N~g~~ 166 (290)
T 1e5r_A 91 LQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNEDT--VIHMRPGEIWFLDAATVHSAVNFSEI 166 (290)
T ss_dssp EEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETTE--EECCCTTEEEECCTTSCEEEEESSSS
T ss_pred hheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECCE--EEecCCCCEEEEcCCCeeEEEcCCCC
Confidence 47788899999999888443 2555455777776655321 33 78899999999999999999999987
No 162
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=94.18 E-value=0.12 Score=45.57 Aligned_cols=63 Identities=19% Similarity=0.227 Sum_probs=49.8
Q ss_pred cCCCcCCCccCCCCcE-EEEEEeeEEEEEEEeCC-------------------------CcEEEEEEcCCCEEEECCCCe
Q 041665 89 PAGAINPPHTHPRSAE-LLFVVSGILEVGFIDTT-------------------------NKLYTQTLQIGDMFVFPKGLV 142 (206)
Q Consensus 89 ~pg~~~~~H~H~~a~E-~~yVl~G~~~~~~~~~~-------------------------~~~~~~~L~~GD~~~~P~g~~ 142 (206)
+.|...+.|..+...- +..+++|+=++.+..+. .+.+..++++||+++||+|..
T Consensus 183 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIPsGW~ 262 (397)
T 3kv9_A 183 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 262 (397)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeCCCCe
Confidence 4566678999977543 56899999888887542 134688999999999999999
Q ss_pred EEEEeCCCC
Q 041665 143 HYQYNSKAN 151 (206)
Q Consensus 143 H~~~N~g~~ 151 (206)
|...|..+.
T Consensus 263 H~V~nledS 271 (397)
T 3kv9_A 263 HAVLTSQDC 271 (397)
T ss_dssp EEEEEEEEE
T ss_pred EEccCCcCe
Confidence 999998554
No 163
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=94.14 E-value=0.35 Score=40.34 Aligned_cols=83 Identities=12% Similarity=0.139 Sum_probs=54.9
Q ss_pred CCeEEEEEEEecCCCc---CCCccCCCC--c------EEEEE-E---eeEEEEEEEeCCCc-EEEEEEcCCCEEEECCCC
Q 041665 78 GQSVSTAILQFPAGAI---NPPHTHPRS--A------ELLFV-V---SGILEVGFIDTTNK-LYTQTLQIGDMFVFPKGL 141 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~---~~~H~H~~a--~------E~~yV-l---~G~~~~~~~~~~~~-~~~~~L~~GD~~~~P~g~ 141 (206)
.-.+-+..+ +.||+. .|||.|.+. . |+.|- + +|-+.-.+...++. -....++-||++.+|+|.
T Consensus 150 a~~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de~~~V~~~d~VlvP~Gy 228 (270)
T 2qjv_A 150 ADSLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXGY 228 (270)
T ss_dssp CSSCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSSB
T ss_pred cceEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCceEEEEECCCEEecCCCc
Confidence 345666666 667664 399999763 3 88865 3 35555555333332 247999999999999999
Q ss_pred eEEEEeCCCCccEEEEEEecCC
Q 041665 142 VHYQYNSKANQPAAAISAFGSA 163 (206)
Q Consensus 142 ~H~~~N~g~~~~a~~i~~~~s~ 163 (206)
|.....-.. ...++.+...+
T Consensus 229 -Hp~~a~pGy-~~YylwvMaG~ 248 (270)
T 2qjv_A 229 -HPVATIAGY-DNYYLNVMAGP 248 (270)
T ss_dssp -CCEEECTTC-EEEEEEEEECS
T ss_pred -CCCcCCCCc-ccEEEEEEECC
Confidence 986654344 45677766553
No 164
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=93.90 E-value=0.16 Score=44.62 Aligned_cols=64 Identities=16% Similarity=0.209 Sum_probs=50.0
Q ss_pred ecCCCcCCCccCCCCc-EEEEEEeeEEEEEEEeCC-------------------------CcEEEEEEcCCCEEEECCCC
Q 041665 88 FPAGAINPPHTHPRSA-ELLFVVSGILEVGFIDTT-------------------------NKLYTQTLQIGDMFVFPKGL 141 (206)
Q Consensus 88 l~pg~~~~~H~H~~a~-E~~yVl~G~~~~~~~~~~-------------------------~~~~~~~L~~GD~~~~P~g~ 141 (206)
-+.|...+.|..+..+ -+..+++|+=++.+..+. .+.+..++++||++++|+|.
T Consensus 181 Gp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGW 260 (392)
T 3pua_A 181 CVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGW 260 (392)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTC
T ss_pred eCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCc
Confidence 3456667899887644 466899999888876432 13468999999999999999
Q ss_pred eEEEEeCCCC
Q 041665 142 VHYQYNSKAN 151 (206)
Q Consensus 142 ~H~~~N~g~~ 151 (206)
.|...|..++
T Consensus 261 wH~V~nledS 270 (392)
T 3pua_A 261 IYATLTPVDC 270 (392)
T ss_dssp EEEEEEEEEE
T ss_pred eEEEecCCCE
Confidence 9999998655
No 165
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.64 E-value=0.12 Score=41.51 Aligned_cols=72 Identities=18% Similarity=0.347 Sum_probs=45.7
Q ss_pred EEEEEEecCCCcCCCccCCCCcEEE---EEE----eeEEEEEEEeCC------------------CcEEEEEEcCCCEEE
Q 041665 82 STAILQFPAGAINPPHTHPRSAELL---FVV----SGILEVGFIDTT------------------NKLYTQTLQIGDMFV 136 (206)
Q Consensus 82 ~~~~~~l~pg~~~~~H~H~~a~E~~---yVl----~G~~~~~~~~~~------------------~~~~~~~L~~GD~~~ 136 (206)
.......++|+...+|.|+. .-+. |+- .|++.+ .++. .......-++|++++
T Consensus 104 ~~W~~~~~~G~~~~~H~H~~-~~lSgV~Yl~~p~~~G~L~f--~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvl 180 (216)
T 2rg4_A 104 DIWINILPEGGVHGSHIHPH-SVISGTTYVAMPEGTSALKL--EDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLL 180 (216)
T ss_dssp EEEEEEECTTCCEEEECCTT-CSEEEEEEEECCSCSCCEEE--ECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEE
T ss_pred eEEEEEcCCCCcccCccCCC-CeEEEEEEEECCCCCccEEE--eCCccccccccCcccccCcccCCCeeEecCCCCeEEE
Confidence 56777789999999999975 2222 221 233333 2321 112255678999999
Q ss_pred ECCCCeEEEEeC-CCCccEEEE
Q 041665 137 FPKGLVHYQYNS-KANQPAAAI 157 (206)
Q Consensus 137 ~P~g~~H~~~N~-g~~~~a~~i 157 (206)
||+.+.|..... +++ +-+.|
T Consensus 181 FpS~l~H~V~p~~~~~-~RiSI 201 (216)
T 2rg4_A 181 WESWLRHEVPMNMAEE-DRISV 201 (216)
T ss_dssp EETTSCEEECCCCSSS-CEEEE
T ss_pred ECCCCEEeccCCCCCC-CEEEE
Confidence 999999999653 344 44444
No 166
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=93.12 E-value=0.45 Score=33.41 Aligned_cols=57 Identities=18% Similarity=0.091 Sum_probs=44.2
Q ss_pred EEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeC
Q 041665 86 LQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNS 148 (206)
Q Consensus 86 ~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~ 148 (206)
-.+.||. .+....+.|++-|++|++++.+.+++. ..+.++||.+.+|++.--.++..
T Consensus 28 GVm~pGe---ytF~T~~~E~M~vvsG~~~V~lpg~~e---w~~~~aGesF~Vpans~F~l~v~ 84 (94)
T 2oyz_A 28 GVMLPGE---YTFGTQAPERMTVVKGALVVKRVGEAD---WTTYSSGESFDVEGNSSFELQVK 84 (94)
T ss_dssp EEECSEE---EEEEESSCEEEEEEESEEEEEETTCSS---CEEEETTCEEEECSSEEEEEEES
T ss_pred EEEeceE---EEEcCCCeEEEEEEEeEEEEEcCCCCc---CEEECCCCEEEECCCCEEEEEEc
Confidence 3355654 333345799999999999999875422 68999999999999998888765
No 167
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=92.29 E-value=0.67 Score=33.46 Aligned_cols=58 Identities=17% Similarity=0.240 Sum_probs=45.5
Q ss_pred EecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeC
Q 041665 87 QFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNS 148 (206)
Q Consensus 87 ~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~ 148 (206)
.+.||. .|.+....+.|++-|++|++++.+.+++. ....++|+.+.+|++.--.++..
T Consensus 43 Vm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lpg~~e---W~~~~aGesF~VpanssF~lkv~ 100 (111)
T 3hqx_A 43 VILPTE-QPLTFETHVPERMEIISGECRVKIADSTE---SELFRAGQSFYVPGNSLFKIETD 100 (111)
T ss_dssp EECCCS-SCEEEECSSCEEEEEEESEEEEEETTCSS---CEEEETTCEEEECTTCEEEEECS
T ss_pred EEeccc-cceEEcCCCcEEEEEEEeEEEEEcCCccc---CEEeCCCCEEEECCCCcEEEEEC
Confidence 366763 22444455799999999999999876432 68999999999999999888865
No 168
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=92.06 E-value=0.48 Score=42.20 Aligned_cols=76 Identities=14% Similarity=0.156 Sum_probs=49.8
Q ss_pred eEEEEEEEec--CCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEE-EEEcCCCEEEECCCCeEEEEeCC---CCcc
Q 041665 80 SVSTAILQFP--AGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYT-QTLQIGDMFVFPKGLVHYQYNSK---ANQP 153 (206)
Q Consensus 80 gi~~~~~~l~--pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~-~~L~~GD~~~~P~g~~H~~~N~g---~~~~ 153 (206)
.+++.++++. ++.....-.+ ....+++|++|++++...+ ++. . ..|++||++++|++..-.+.+.+ .+ .
T Consensus 356 eF~v~~~~~~~~~~~~~~~~~~-~~~~illv~~G~g~i~~~~--~~~-~~~~l~~G~~~fvpa~~~~~i~g~~~~~~~-~ 430 (440)
T 1pmi_A 356 EFSVLQTIFDKSKGGKQVIEGL-NGPSIVIATNGKGTIQITG--DDS-TKQKIDTGYVFFVAPGSSIELTADSANQDQ-D 430 (440)
T ss_dssp SCEEEEEECCTTTCCEEEECCC-SSCEEEEEEESEEEEEETT--CGG-GCEEEETTCEEEECTTCCEEEEECSSCCSS-C
T ss_pred eEEEEEEEecCCCCceeEEecC-CCcEEEEEEeCeEEEEeCC--ccc-ceEEeccCCEEEEeCCCcEEEEEecccCCC-c
Confidence 4688888887 4422221122 3588999999999986421 110 1 58999999999999555566552 45 5
Q ss_pred EEEEEEe
Q 041665 154 AAAISAF 160 (206)
Q Consensus 154 a~~i~~~ 160 (206)
++++.++
T Consensus 431 ~~~~~a~ 437 (440)
T 1pmi_A 431 FTTYRAF 437 (440)
T ss_dssp CEEEEEE
T ss_pred EEEEEEE
Confidence 6666655
No 169
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=91.94 E-value=4.2 Score=32.85 Aligned_cols=134 Identities=14% Similarity=0.105 Sum_probs=77.6
Q ss_pred CCCceEEEEeeccccCC----CCCC-eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeE-EEEEEEeCCC----------
Q 041665 59 DPPIFRVSKASMAEFPA----LNGQ-SVSTAILQFPAGAINPPHTHPRSAELLFVVSGI-LEVGFIDTTN---------- 122 (206)
Q Consensus 59 ~~~g~~v~~~~~~~~P~----l~~~-gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~-~~~~~~~~~~---------- 122 (206)
-+-||..+......... -... -......-+.+|....||.- +++|+.+-..|. +++.+..++|
T Consensus 33 HPEGG~yrEt~Rs~~~v~~~~~~~R~~~TaIYfLL~~g~~S~~HRv-~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~~ 111 (225)
T 3m3i_A 33 HPEGGYYSEVVRSAHKVDNEEGNRRHAYTTIYFLCTPESPSHLHRL-CSDETWMYHAGDPLQLHVILKDPQDEDRIAAQP 111 (225)
T ss_dssp CTTSSEEEEEEECSSEEECTTSCEEESCEEEEEEECSSSCEEEEEC-SSEEEEEEEEESCEEEEEEESSSTTTTC-----
T ss_pred CCCCceEEEEEECCCcccCCCCCCcccceeEEEEecCCCCcccEEe-cCCEEEEEECCCCEEEEEEcCCCcccccccccc
Confidence 35677777666543310 0111 13455556778775444443 679999999998 5787877777
Q ss_pred ------------------cEEEEEEc----CCC--EEEECCCCeEEEEeCCCCc----cEEEEEEecCCCcceeeechhh
Q 041665 123 ------------------KLYTQTLQ----IGD--MFVFPKGLVHYQYNSKANQ----PAAAISAFGSASAGTVSVPTTV 174 (206)
Q Consensus 123 ------------------~~~~~~L~----~GD--~~~~P~g~~H~~~N~g~~~----~a~~i~~~~s~~pg~~~~~~~~ 174 (206)
+..+..|. +|+ -++||+|.+...+..++++ .-.++++. -.||+..-.
T Consensus 112 ~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~~~sLVsCt--VaPGFdF~D--- 186 (225)
T 3m3i_A 112 PAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADGADGQAGYSLVSCI--VSPGFDYRD--- 186 (225)
T ss_dssp -------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSSTTCSSSCEEEEEE--EESCCCGGG---
T ss_pred cccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCCcCcCCCeEEEEEE--EcCCccchh---
Confidence 45566674 466 6899999999888765420 22333322 125543211
Q ss_pred hcCCCCHHHHHHHcCCCHHHHHHHH
Q 041665 175 FATGIDENILAKAFKTDVTTIQKIK 199 (206)
Q Consensus 175 f~~~~p~~vla~~f~~~~~~v~~l~ 199 (206)
|. -.+.+-|.+.|---++.|++|-
T Consensus 187 Fe-l~~~~~L~~~~P~~~~~I~~lt 210 (225)
T 3m3i_A 187 FE-IFTQAQLMELYPQHEAVIKQMA 210 (225)
T ss_dssp CE-ECBHHHHHHHCGGGHHHHHHHS
T ss_pred cE-ecCHHHHHHHCchHHHHHHHhc
Confidence 11 1345555556655566666654
No 170
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=91.73 E-value=0.45 Score=43.31 Aligned_cols=63 Identities=14% Similarity=0.194 Sum_probs=48.2
Q ss_pred cCCCcCCCccCCCCc-EEEEEEeeEEEEEEEeCC-------------------------CcEEEEEEcCCCEEEECCCCe
Q 041665 89 PAGAINPPHTHPRSA-ELLFVVSGILEVGFIDTT-------------------------NKLYTQTLQIGDMFVFPKGLV 142 (206)
Q Consensus 89 ~pg~~~~~H~H~~a~-E~~yVl~G~~~~~~~~~~-------------------------~~~~~~~L~~GD~~~~P~g~~ 142 (206)
+.|....+|.-+..+ -+..|++|+=++.+..+. ++.+..++++||.+++|+|.+
T Consensus 304 ~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW~ 383 (528)
T 3pur_A 304 MAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWI 383 (528)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCce
Confidence 445556888876543 577899999888777542 234578999999999999999
Q ss_pred EEEEeCCCC
Q 041665 143 HYQYNSKAN 151 (206)
Q Consensus 143 H~~~N~g~~ 151 (206)
|...|..+.
T Consensus 384 HaV~tleDS 392 (528)
T 3pur_A 384 HAVLTPVDS 392 (528)
T ss_dssp EEEEEEEEE
T ss_pred EEEecCCCe
Confidence 999998544
No 171
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=90.75 E-value=0.33 Score=41.30 Aligned_cols=46 Identities=17% Similarity=0.348 Sum_probs=32.0
Q ss_pred CCcEEEEEEee----EEEEEEEeCC----------C----cEEEEEEcCCCEEEECCCCeEEEE
Q 041665 101 RSAELLFVVSG----ILEVGFIDTT----------N----KLYTQTLQIGDMFVFPKGLVHYQY 146 (206)
Q Consensus 101 ~a~E~~yVl~G----~~~~~~~~~~----------~----~~~~~~L~~GD~~~~P~g~~H~~~ 146 (206)
+-.|.+|++.. ++.++....+ + -+-...|++||.+++|+|.+|.+-
T Consensus 116 gKpE~~y~L~~~~~~~~~~G~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (319)
T 1qwr_A 116 GKTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHALC 179 (319)
T ss_dssp CCCEEEEEEEECTTCEEEEEECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEEC
T ss_pred CCCEEEEEccCCCchhheeCCCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEec
Confidence 35899999986 3433311100 0 013789999999999999999974
No 172
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=90.70 E-value=4.8 Score=31.20 Aligned_cols=130 Identities=15% Similarity=0.155 Sum_probs=79.3
Q ss_pred CCC-ceEEEEeecccc----CCCCCC--eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeE-EEEEEEeCCCcEEEEEEc
Q 041665 59 DPP-IFRVSKASMAEF----PALNGQ--SVSTAILQFPAGAINPPHTHPRSAELLFVVSGI-LEVGFIDTTNKLYTQTLQ 130 (206)
Q Consensus 59 ~~~-g~~v~~~~~~~~----P~l~~~--gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~-~~~~~~~~~~~~~~~~L~ 130 (206)
.|- ||..+....... +...+. .......-+.+|....||.- +++|+.+-..|. +++.+..++|+..+..|.
T Consensus 24 HPEEGG~yrEt~rs~~~v~~~~~~~~R~~~TaIYfLL~~~~~S~~HRv-~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG 102 (172)
T 3loi_A 24 HPASGGWFRETYRSDVQVEAEGFDGKRSVLTMIYYLMQAGQPDPFHRV-KSDETFVHNLGGSMKIHMIHPDGSYSCSILG 102 (172)
T ss_dssp CTTSSSEEEEEEECSCEECCTTSSSCEESCEEEEEEEETTCCEEEEEC-SSEEEEEEEEESCEEEEEECTTSCEEEEEES
T ss_pred CCcCCCeEEEEEECcCcccCCCCCCCcccceEEEEEEcCCCCccCEEe-cCCEEEEEEcCCCEEEEEEcCCCceEEEEeC
Confidence 345 777766655431 111111 13555566778775555554 679999999996 688888888877777775
Q ss_pred ----CCC---EEEECCCCeEEEEeCCCCccEEEEEEecCCCcceeeechhhhcCCCCHHHHHHHcCCCHHHHHHHH
Q 041665 131 ----IGD---MFVFPKGLVHYQYNSKANQPAAAISAFGSASAGTVSVPTTVFATGIDENILAKAFKTDVTTIQKIK 199 (206)
Q Consensus 131 ----~GD---~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg~~~~~~~~f~~~~p~~vla~~f~~~~~~v~~l~ 199 (206)
+|+ -++||+|.....+. + .-.++.+. -.||+..-. |. -.+.+-|.+.|---.+.|++|-
T Consensus 103 ~d~~~Ge~~pQ~vVP~G~WqaA~~-~---~~~LVsct--VaPGF~f~d---fe-l~~~~~L~~~~P~~~~~I~~lt 168 (172)
T 3loi_A 103 NPLEHPEARHQVVVPRRVWFAQEV-D---GYCLASVL--VAPGFDFKD---FS-LGKREELIKEYPQHRDVIMRCT 168 (172)
T ss_dssp CTTTSTTCBSEEEECTTCEEEEEE-S---SEEEEEEE--EESCCCGGG---CE-ECCHHHHHHHCGGGHHHHHHTS
T ss_pred CCcccCCcceEEEECCCEEEEEEe-C---CcEEEEEE--EcCCccchh---cE-EcCHHHHHHHCchHHHHHHHhc
Confidence 577 78999999988887 3 23333332 125542211 21 1455666666755566666653
No 173
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=90.52 E-value=0.39 Score=40.89 Aligned_cols=54 Identities=22% Similarity=0.253 Sum_probs=39.7
Q ss_pred eEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCC
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGL 141 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~ 141 (206)
.+++.++++.++... ...++..++.|++|++++.. +++ ...|++||.+++|++.
T Consensus 250 ~F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~---~~~--~~~l~~G~~~~vpa~~ 303 (319)
T 1qwr_A 250 YFSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKY---EDK--TCPLKKGDHFILPAQM 303 (319)
T ss_dssp SCEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTC
T ss_pred EEEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEE---CCE--EEEEcCCcEEEEeCCC
Confidence 357777777654322 22346899999999999864 233 6799999999999986
No 174
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=90.50 E-value=0.4 Score=42.07 Aligned_cols=55 Identities=15% Similarity=0.146 Sum_probs=40.3
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCC
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGL 141 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~ 141 (206)
..+++.++++.++.. . ..+ ++..++.|++|++++... ++ ...|++||.+++|++.
T Consensus 322 ~~F~v~~~~l~~~~~-~-~~~-~~~~il~v~~G~~~l~~~---~~--~~~l~~G~~~fvpa~~ 376 (394)
T 2wfp_A 322 DDFAFSLHDLALQET-S-IGQ-HSAAILFCVEGEAVLRKD---EQ--RLVLKPGESAFIGADE 376 (394)
T ss_dssp SSCEEEEEECCSSCE-E-ECC-SSCEEEEEEEEEEEEEET---TE--EEEECTTCEEEECGGG
T ss_pred CEEEEEEEEEcCCeE-E-ecC-CCcEEEEEEeceEEEEEC---Ce--EEEEccCcEEEEeCCC
Confidence 356788888875532 1 234 347999999999987642 22 6799999999999985
No 175
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=90.47 E-value=2.6 Score=35.28 Aligned_cols=82 Identities=15% Similarity=0.226 Sum_probs=53.3
Q ss_pred CeEEEEEEEecCCCc---CCCccCCCCcEEEEEEe----eEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCC
Q 041665 79 QSVSTAILQFPAGAI---NPPHTHPRSAELLFVVS----GILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKAN 151 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~---~~~H~H~~a~E~~yVl~----G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~ 151 (206)
-.+.+....+.||+. .|+|.|.+..|..|--+ |.+ +.+..+.++.+...++-||++.+|+..+|.. .|..
T Consensus 178 ~qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gfv-~q~~g~p~Etrhi~V~n~daVlvP~wh~h~~--~G~~ 254 (282)
T 1xru_A 178 CQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACV-FHMMGQPQETRHIVMHNEQAVISPSWSIHSG--VGTK 254 (282)
T ss_dssp SSCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCCE-EEEEEETTEEEEEEECSSEEEEECTTCEEEE--EESS
T ss_pred hhEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCEE-EEEeCCCCCeeEEEEECCCEEEeCCCCCCCC--CCcc
Confidence 345677777888872 49999987677666554 433 3333434444456889999999997667764 4665
Q ss_pred ccEEEEEEecCCC
Q 041665 152 QPAAAISAFGSAS 164 (206)
Q Consensus 152 ~~a~~i~~~~s~~ 164 (206)
.-.+|.+...+|
T Consensus 255 -~Y~ylwvMAG~n 266 (282)
T 1xru_A 255 -AYTFIWGMVGEN 266 (282)
T ss_dssp -CCEEEEEEEESC
T ss_pred -ceEEEEEEEcCC
Confidence 555666664444
No 176
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=90.28 E-value=1.4 Score=35.91 Aligned_cols=69 Identities=7% Similarity=-0.026 Sum_probs=48.0
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAIS 158 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~ 158 (206)
..+.+..++++||+....-..++..-++||++|++++. | ..|++||.+++..+..-.+.+. + ++.++.
T Consensus 158 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v~-----g----~~l~~gd~~~~~~~~~l~l~a~--~-~a~~Ll 225 (242)
T 1tq5_A 158 QDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTIN-----G----VKASTSDGLAIWDEQAISIHAD--S-DSEVLL 225 (242)
T ss_dssp SSCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEET-----T----EEEETTCEEEEESCSCEEEEES--S-SEEEEE
T ss_pred CCCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEEC-----C----EEeCCCCEEEECCCCeEEEEeC--C-CCEEEE
Confidence 35678889999999763333344467899999998872 2 3699999999987765556553 3 455544
Q ss_pred E
Q 041665 159 A 159 (206)
Q Consensus 159 ~ 159 (206)
+
T Consensus 226 ~ 226 (242)
T 1tq5_A 226 F 226 (242)
T ss_dssp E
T ss_pred E
Confidence 3
No 177
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=90.21 E-value=4.9 Score=30.57 Aligned_cols=90 Identities=12% Similarity=0.086 Sum_probs=61.1
Q ss_pred CCCceEEEEeeccccCCCCCCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeE-EEEEEEeCCCcEEEEEEc----CCC
Q 041665 59 DPPIFRVSKASMAEFPALNGQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGI-LEVGFIDTTNKLYTQTLQ----IGD 133 (206)
Q Consensus 59 ~~~g~~v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~-~~~~~~~~~~~~~~~~L~----~GD 133 (206)
.|-||..+........+-+.. .+....-+.+|....+|.=.+++|+.+-..|. +++.+..++|...+.+|. +|+
T Consensus 19 HPEGG~yrEt~Rs~~~~~R~~-~TaIYfLL~~g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge 97 (154)
T 1znp_A 19 HPEGGFYHQTFRDKAGGERGH-STAIYYLLEKGVRSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGE 97 (154)
T ss_dssp CTTSSEEEEEEECSSSTTTCS-CEEEEEEEESSCCEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTE
T ss_pred CCCCccEEEEEeCCCCCCCcc-eeEEEEEecCCCCCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCc
Confidence 456888877766543222222 34444456677655555433589999999998 778787777766667774 465
Q ss_pred --EEEECCCCeEEEEeCC
Q 041665 134 --MFVFPKGLVHYQYNSK 149 (206)
Q Consensus 134 --~~~~P~g~~H~~~N~g 149 (206)
-++||+|.....+..+
T Consensus 98 ~pQ~vVP~G~WqaA~~~g 115 (154)
T 1znp_A 98 RPQVIVPANCWQSAESLG 115 (154)
T ss_dssp ESEEEECTTCEEEEEESS
T ss_pred ccEEEEcCCEEEEeeECC
Confidence 4899999999888764
No 178
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=89.81 E-value=0.31 Score=42.68 Aligned_cols=41 Identities=20% Similarity=0.224 Sum_probs=32.1
Q ss_pred cEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEecCCC
Q 041665 123 KLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFGSAS 164 (206)
Q Consensus 123 ~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~ 164 (206)
+.++..-++||.++||+|.+|+.+|..+. -.+..-.++.++
T Consensus 291 ~~~~~~Q~~GeavfiPaG~~HQV~Nl~~~-i~va~df~spe~ 331 (392)
T 2ypd_A 291 RTCTLIQFLGDAIVLPAGALHQVQNFHSC-IQVTEDFVSPEH 331 (392)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEESSEE-EEEEEEECCGGG
T ss_pred eeEEEEEcCCCEEEecCCCHHHHhcccch-hhHhhhhcChhh
Confidence 45688999999999999999999999876 455554555444
No 179
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=89.53 E-value=0.69 Score=33.13 Aligned_cols=56 Identities=21% Similarity=0.151 Sum_probs=43.3
Q ss_pred EecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeC
Q 041665 87 QFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNS 148 (206)
Q Consensus 87 ~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~ 148 (206)
.+.||. .+....+.|++-|++|++++.+.+++ ....+++|+.+.+|++.--.++..
T Consensus 42 Vm~PGe---Y~F~T~~~E~MevvsG~l~V~LpG~~---eW~~~~aGesF~VpanssF~lkv~ 97 (106)
T 3eo6_A 42 LLHPGV---YTLSSEVAETIRVLSGMAYYHAEGAN---DVQELHAGDSMVIPANQSYRLEVM 97 (106)
T ss_dssp EECSEE---EEECCSSCEEEEEEEEEEEEECTTCS---SCEEEETTCEEEECSSSCEEEEEE
T ss_pred EEeeeE---EEecCCCcEEEEEEEeEEEEECCCCc---cCEEECCCCEEEECCCCcEEEEEC
Confidence 355653 34445579999999999999886642 268999999999999998777654
No 180
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=88.84 E-value=1.9 Score=35.56 Aligned_cols=71 Identities=15% Similarity=0.105 Sum_probs=47.6
Q ss_pred CeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEE
Q 041665 79 QSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 79 ~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i 157 (206)
..+.+..+.++||........+.. -++||++|++++. +.++. ...|.+||.+++..+..-.+.+. + ++.++
T Consensus 180 ~~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G~v~v~--g~~~~--~~~l~~gd~~~l~~~~~l~l~a~--~-~a~~L 250 (256)
T 2vec_A 180 QQVWLHHIVLDKGESANFQLHGPR-AYLQSIHGKFHAL--THHEE--KAALTCGDGAFIRDEANITLVAD--S-PLRAL 250 (256)
T ss_dssp SSCEEEEEEECTTCEEEEECSSSE-EEEEEEESCEEEE--ETTEE--EEEECTTCEEEEESCSEEEEEES--S-SEEEE
T ss_pred CCcEEEEEEECCCCEEEEecCCCe-EEEEEEECEEEEC--Ccccc--ceEECCCCEEEECCCCeEEEEeC--C-CCEEE
Confidence 356788889999997644333343 7899999998874 32111 35799999999976655455543 3 45444
No 181
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=87.70 E-value=1.6 Score=36.75 Aligned_cols=82 Identities=13% Similarity=0.104 Sum_probs=46.0
Q ss_pred CeEEEEEEEecCCC-c--CCCccCCCCcEEEEEEe----eEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCC
Q 041665 79 QSVSTAILQFPAGA-I--NPPHTHPRSAELLFVVS----GILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKAN 151 (206)
Q Consensus 79 ~gi~~~~~~l~pg~-~--~~~H~H~~a~E~~yVl~----G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~ 151 (206)
-.+.+....+.||+ . .|+|.|.+..|..|--+ |. .+.+.++.++.+...++-||++++|+|-.|.. .|..
T Consensus 178 ~qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~-v~h~~g~pdEtrh~~V~n~daVlvP~wgyHp~--~Gt~ 254 (289)
T 1ywk_A 178 CQLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTR-IFHMMGKPDETKHLVMSNEQAAISPSWSIHSG--VGTS 254 (289)
T ss_dssp SSCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCC-EEEEESSTTSCEEEEECTTEEEEECTTSCCCE--EESS
T ss_pred heEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCe-EEEECCCCCceEEEEEECCCEEEeCCCcccCC--CCCc
Confidence 34567777787877 3 39999987677766443 22 23333433444457889999999999988863 3444
Q ss_pred ccEEEEEEecCCC
Q 041665 152 QPAAAISAFGSAS 164 (206)
Q Consensus 152 ~~a~~i~~~~s~~ 164 (206)
.-.+|.+...+|
T Consensus 255 -~Y~ylwvMAG~n 266 (289)
T 1ywk_A 255 -NYSFIWAMCGEN 266 (289)
T ss_dssp -CCEEEEEEECC-
T ss_pred -CeEEEEEEEcCC
Confidence 444666665544
No 182
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=87.48 E-value=2.2 Score=35.42 Aligned_cols=72 Identities=10% Similarity=0.067 Sum_probs=48.5
Q ss_pred CCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECC-C----CeEEEEeCCCCc
Q 041665 78 GQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPK-G----LVHYQYNSKANQ 152 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~-g----~~H~~~N~g~~~ 152 (206)
...+.+..+.+++|........+...-++||++|++++. +. ...|.+||.+++.. + ..-.+.+. +
T Consensus 164 ~~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v~--g~-----~~~l~~~d~~~~~~~~~~~~~~l~l~a~--~- 233 (277)
T 2p17_A 164 IVPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFG--AD-----NIEGKAGQALFFSRHNRGEETELNVTAR--E- 233 (277)
T ss_dssp SSCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEET--TT-----TEEEETTEEEEECCCCTTCEEEEEEEES--S-
T ss_pred CCCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEEC--CC-----ceEeCCCcEEEEcCCCCCccceEEEEeC--C-
Confidence 346788999999999764333333367899999998772 21 24699999999985 5 44455553 3
Q ss_pred cEEEEEE
Q 041665 153 PAAAISA 159 (206)
Q Consensus 153 ~a~~i~~ 159 (206)
++.++.+
T Consensus 234 ~a~~Ll~ 240 (277)
T 2p17_A 234 KLRLLLY 240 (277)
T ss_dssp SEEEEEE
T ss_pred CcEEEEE
Confidence 4554443
No 183
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=86.75 E-value=0.9 Score=38.28 Aligned_cols=54 Identities=13% Similarity=0.140 Sum_probs=38.9
Q ss_pred eEEEEEEEecCCCcCCCccCCCCc-EEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeE
Q 041665 80 SVSTAILQFPAGAINPPHTHPRSA-ELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVH 143 (206)
Q Consensus 80 gi~~~~~~l~pg~~~~~H~H~~a~-E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H 143 (206)
.+++.++++.+.... .. ++. .++.|++| +++... ++ ...|++||.+++|++.-.
T Consensus 229 ~F~v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~~---~~--~~~l~~G~~~~ipa~~~~ 283 (300)
T 1zx5_A 229 NFGLEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILRG---KE--TADLHRGYSCLVPASTDS 283 (300)
T ss_dssp SEEEEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEES---SS--EEEECTTCEEEECTTCCE
T ss_pred eEEEEEEEECCceEE---ec-CCceEEEEEccc-EEEEeC---Ce--EEEEccceEEEEeCCCce
Confidence 467777777642222 23 457 89999999 888652 22 578999999999998743
No 184
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=86.00 E-value=7.6 Score=33.43 Aligned_cols=77 Identities=17% Similarity=0.057 Sum_probs=52.1
Q ss_pred EEEeeccccCCCCCCeEEEEEEEecCCCcC-CCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeE
Q 041665 65 VSKASMAEFPALNGQSVSTAILQFPAGAIN-PPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVH 143 (206)
Q Consensus 65 v~~~~~~~~P~l~~~gi~~~~~~l~pg~~~-~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H 143 (206)
-+.+.....|.+.++ ....+++..++.. ..--| +.--.+|.+|++++.+..++|. ....|+++|..++-+-++|
T Consensus 320 Ye~AS~A~~phlPdl--~g~~l~Vd~~d~~~DL~d~--ge~hY~v~~G~lTL~W~~~dGt-~~a~L~PDgSAwv~PFV~H 394 (443)
T 3g7d_A 320 YEAASMASAAHLPDL--VGSFLRVDADGRGADLIDH--AENHYVVTEGRLTLEWDGPDGP-ASVELEPDGSAWTGPFVRH 394 (443)
T ss_dssp EEEEECCCCTTCTTC--EEEEEEEC------CBCCS--SEEEEEEEESCEEEEEEETTEE-EEEEECTTCEEEECTTCCE
T ss_pred eehhhhhccccCCCc--eeEEEEecCCCcchhhhhc--ccceEEEecCceEEEecCCCCc-cceEECCCCceeecccccc
Confidence 455666666777655 3344444444332 22223 2444558899999999887665 7899999999999999999
Q ss_pred EEE
Q 041665 144 YQY 146 (206)
Q Consensus 144 ~~~ 146 (206)
.+.
T Consensus 395 ~w~ 397 (443)
T 3g7d_A 395 RWH 397 (443)
T ss_dssp EEE
T ss_pred ccc
Confidence 998
No 185
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=85.76 E-value=4.5 Score=33.58 Aligned_cols=70 Identities=14% Similarity=0.079 Sum_probs=47.8
Q ss_pred EEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEE-c-C--------CCEEEECCCCeEEEEeCCC
Q 041665 81 VSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTL-Q-I--------GDMFVFPKGLVHYQYNSKA 150 (206)
Q Consensus 81 i~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L-~-~--------GD~~~~P~g~~H~~~N~g~ 150 (206)
+.+..++|++|.......- +.+-.++.+.|++++.+.++ ++.+ . . .|++++|.|.--.+...+
T Consensus 29 ~~f~~~~L~~Ge~~~~~~~-~~E~~iv~l~G~~~V~~~g~-----~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~- 101 (270)
T 2qjv_A 29 VGFDVWQLXAGESITLPSD-ERERCLVLVAGLASVXAADS-----FFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAET- 101 (270)
T ss_dssp CEEEEEEECTTCEEEECCS-SEEEEEEEEESCEEEEETTE-----EEEEECCCSSGGGCSCCCEEEECSSCCEEEEESS-
T ss_pred eEEEEEEecCCCEEEecCC-CcEEEEEEecceEEEEECCE-----EEeccccccccccCCCCcEEEECCCCEEEEEecC-
Confidence 5677888999998766655 32445556789999987543 4544 2 2 499999999966676654
Q ss_pred CccEEEEEE
Q 041665 151 NQPAAAISA 159 (206)
Q Consensus 151 ~~~a~~i~~ 159 (206)
++++...
T Consensus 102 --~~~~~v~ 108 (270)
T 2qjv_A 102 --DLELAVC 108 (270)
T ss_dssp --SEEEEEE
T ss_pred --CceEEEE
Confidence 3444443
No 186
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=85.52 E-value=3 Score=34.92 Aligned_cols=77 Identities=12% Similarity=0.100 Sum_probs=50.2
Q ss_pred CCeEEEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEE
Q 041665 78 GQSVSTAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 78 ~~gi~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i 157 (206)
...+.+..+.+++|........++..-++||++|++++. +.+. ...+.++.+++...|..-.+.+..++ ++.++
T Consensus 166 ~~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~--g~~~---~~~~~~~~~~~l~~gd~~~i~~~a~~-~a~~L 239 (290)
T 1j1l_A 166 RTPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG--PDDA---QQKIEPHHTAVLGEGDSVQVENKDPK-RSHFV 239 (290)
T ss_dssp SSCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES--CTTS---CEEECTTEEEEECSCSEEEEECCSSS-CEEEE
T ss_pred cCCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC--Cccc---ceeccCceEEEecCCCEEEEEEcCCC-CcEEE
Confidence 345788899999999763333333477899999998873 2110 14566777777777766666664455 66666
Q ss_pred EEe
Q 041665 158 SAF 160 (206)
Q Consensus 158 ~~~ 160 (206)
.+-
T Consensus 240 Ll~ 242 (290)
T 1j1l_A 240 LIA 242 (290)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 187
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=85.37 E-value=1.8 Score=30.70 Aligned_cols=52 Identities=8% Similarity=0.094 Sum_probs=37.2
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMF 135 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~ 135 (206)
+....+++|...-..-- ....+.+|++|.+++...+.+|+ .....+.+||++
T Consensus 28 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 28 MSEVTLARGDTLFHEGD-PGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELI 80 (149)
T ss_dssp CEEEEECTTCEEECTTS-EECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEE
T ss_pred ceEEEeCCCCEEECCCC-CCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEe
Confidence 34566778776522212 24779999999999988777675 456789999986
No 188
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=84.73 E-value=3.9 Score=30.85 Aligned_cols=52 Identities=12% Similarity=0.061 Sum_probs=38.1
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMF 135 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~ 135 (206)
+....+++|...-.--- ....+.+|++|.+++...+++|+ .....+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~G~-~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTEGD-PGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcCCC-CCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 45566778776522222 34889999999999998887774 456789999986
No 189
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=84.33 E-value=3.4 Score=31.00 Aligned_cols=51 Identities=20% Similarity=0.057 Sum_probs=37.7
Q ss_pred EEEEecCCCcC-CCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEE
Q 041665 84 AILQFPAGAIN-PPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFV 136 (206)
Q Consensus 84 ~~~~l~pg~~~-~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~ 136 (206)
....+++|... ... .....+.+|++|.+++...+++|+ .....+.+||++-
T Consensus 31 ~~~~~~~g~~l~~~G--~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 31 QLKKVRKKETLLKTG--EICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLS 83 (194)
T ss_dssp EEEEECTTCEEECTT--SBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEC
T ss_pred EEEEEcCCCEEECCC--CeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEe
Confidence 45667777764 222 234889999999999998877775 4566789999985
No 190
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=83.99 E-value=3.5 Score=31.14 Aligned_cols=52 Identities=19% Similarity=0.291 Sum_probs=37.2
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEE
Q 041665 84 AILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFV 136 (206)
Q Consensus 84 ~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~ 136 (206)
....+++|...-.. ......+++|++|.+++...+++|+ .....+.+||++-
T Consensus 14 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 14 HRRRYTAKSTIIYA-GDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFG 66 (207)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEES
T ss_pred ceEEECCCCEEEcC-CCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcc
Confidence 34567777765221 2234789999999999988877775 4567889999874
No 191
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=83.69 E-value=1.9 Score=30.42 Aligned_cols=52 Identities=15% Similarity=0.319 Sum_probs=32.8
Q ss_pred EEEEEecCCCcC-CCccCCCCcEEEEEEeeEEEEEEEeCCCc-EE---EEEEcCCCEEE
Q 041665 83 TAILQFPAGAIN-PPHTHPRSAELLFVVSGILEVGFIDTTNK-LY---TQTLQIGDMFV 136 (206)
Q Consensus 83 ~~~~~l~pg~~~-~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~---~~~L~~GD~~~ 136 (206)
+....+++|... ... .....+.+|++|.+++...+.+|+ .. ...+.+||++=
T Consensus 29 ~~~~~~~~g~~i~~~g--~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKEN--SKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECTT--SBCCEEEEEEESCEEEECC---------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeCC--CCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEec
Confidence 355667787754 332 235889999999999986666663 33 56789999874
No 192
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=83.13 E-value=4.2 Score=29.56 Aligned_cols=51 Identities=6% Similarity=-0.003 Sum_probs=35.9
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMF 135 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~ 135 (206)
+....+++|...-.. ......+.+|++|.+.+.. +.+|+ .....+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVIDQ-GDDGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEEeC-CCCCcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEe
Confidence 345667787765222 2335889999999999988 55664 456778999965
No 193
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=82.89 E-value=3.7 Score=31.85 Aligned_cols=52 Identities=12% Similarity=0.169 Sum_probs=37.7
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEE
Q 041665 84 AILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFV 136 (206)
Q Consensus 84 ~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~ 136 (206)
....+++|...-..-. ....+++|++|.+.+...+++|+ .....+.+||++-
T Consensus 35 ~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 87 (237)
T 3fx3_A 35 VWRSYDRGETLFLQEE-KAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFG 87 (237)
T ss_dssp EEEEECTTCEEECTTS-CCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEEC
T ss_pred EEEEECCCCEEEcCCC-ccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEec
Confidence 4556777776522222 34789999999999998877775 4567889999873
No 194
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=82.76 E-value=4.2 Score=30.71 Aligned_cols=52 Identities=21% Similarity=0.349 Sum_probs=37.4
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEE
Q 041665 84 AILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFV 136 (206)
Q Consensus 84 ~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~ 136 (206)
....+++|...-..-- ....+++|++|.+++...+++|+ .....+.+||++-
T Consensus 20 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 20 HIHKYPSKSTLIHQGE-KAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 72 (210)
T ss_dssp EEEEECTTCEEECTTS-BCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred EEEEeCCCCEEECCCC-CCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 3456777775422222 34789999999999988877775 4567889999884
No 195
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=82.52 E-value=3.3 Score=31.50 Aligned_cols=115 Identities=14% Similarity=0.054 Sum_probs=69.6
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEEEC-----CCCeEEEEeCCCCccEEEE
Q 041665 84 AILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFVFP-----KGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 84 ~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~~P-----~g~~H~~~N~g~~~~a~~i 157 (206)
....+++|...-..-. ....+++|++|.+.+...+++|+ .....+.+||++-.. ....+.+... + ++.++
T Consensus 23 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~--~-~~~v~ 98 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQGD-LGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVAV--E-DTELL 98 (216)
T ss_dssp EEEEECTTCEEECTTC-BCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEES--S-SEEEE
T ss_pred eEEEeCCCCEEEeCCC-CCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEEc--C-CEEEE
Confidence 4556777776532222 34889999999999998877775 456789999987421 1123344443 3 44544
Q ss_pred EEec-------CCCcceeee----------------------------chhhh---------cCCCCHHHHHHHcCCCHH
Q 041665 158 SAFG-------SASAGTVSV----------------------------PTTVF---------ATGIDENILAKAFKTDVT 193 (206)
Q Consensus 158 ~~~~-------s~~pg~~~~----------------------------~~~~f---------~~~~p~~vla~~f~~~~~ 193 (206)
.+-. ..+|..... +..+. .-.++.+-+|..+|++++
T Consensus 99 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr~ 178 (216)
T 4ev0_A 99 ALFREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEARNRVAYALLKLLRQGLGPLFQIRHHELAALAGTSRE 178 (216)
T ss_dssp EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCHHHHHHHHTSCHH
T ss_pred EEcHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccCCCCCHHHHHHHhCCCHH
Confidence 4321 113322100 01111 114788999999999999
Q ss_pred HHHHHHhhc
Q 041665 194 TIQKIKAGL 202 (206)
Q Consensus 194 ~v~~l~~~~ 202 (206)
.+.++.+++
T Consensus 179 tvsR~l~~l 187 (216)
T 4ev0_A 179 TVSRVLHAL 187 (216)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887765
No 196
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=82.41 E-value=6.9 Score=30.01 Aligned_cols=113 Identities=13% Similarity=0.028 Sum_probs=69.5
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEec
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFG 161 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~ 161 (206)
+....+++|...-..-. ....+++|++|.+.+. .+.+|+ .....+.+||++- ....+.+.... ++.++.+-.
T Consensus 23 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~~---~~~v~~i~~ 95 (222)
T 1ft9_A 23 FRSKIHAKGSLVCTGEG-DENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC--MHSGCLVEATE---RTEVRFADI 95 (222)
T ss_dssp CEEEEECTTCEEECTTC-CCCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE--SCSSCEEEESS---CEEEEEECH
T ss_pred CcEEEECCCCEEECCCC-CCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec--CCCCEEEEEcc---ceEEEEEeH
Confidence 34566777776522222 3478999999999996 555675 4567899999887 33445555543 445544321
Q ss_pred -------CCCcceeee----------------------------chhh----------------hcCCCCHHHHHHHcCC
Q 041665 162 -------SASAGTVSV----------------------------PTTV----------------FATGIDENILAKAFKT 190 (206)
Q Consensus 162 -------s~~pg~~~~----------------------------~~~~----------------f~~~~p~~vla~~f~~ 190 (206)
..+|..... +..+ +.-.++.+-+|..+|+
T Consensus 96 ~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~~t~~~lA~~lG~ 175 (222)
T 1ft9_A 96 RTFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQTQGGVIVSVDFTVEEIANLIGS 175 (222)
T ss_dssp HHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCBCCCSCC--CCCCEECCCHHHHHHHHCS
T ss_pred HHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCC
Confidence 123432100 0011 0113788999999999
Q ss_pred CHHHHHHHHhhc
Q 041665 191 DVTTIQKIKAGL 202 (206)
Q Consensus 191 ~~~~v~~l~~~~ 202 (206)
+++.+.++.+++
T Consensus 176 sr~tvsR~l~~L 187 (222)
T 1ft9_A 176 SRQTTSTALNSL 187 (222)
T ss_dssp CHHHHHHHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 999888877765
No 197
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=82.35 E-value=4 Score=31.53 Aligned_cols=53 Identities=9% Similarity=0.131 Sum_probs=37.7
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFV 136 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~ 136 (206)
+....+++|...-..-- ....+++|++|.+.+...+++|+ .....+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 29 VTERNFQPDELVVEQDA-EGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVG 82 (231)
T ss_dssp EEEEEECTTCBCCCTTC-TTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEES
T ss_pred cEEEEECCCCEEEeCCC-CCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEe
Confidence 45667888886533323 34789999999999988877775 4567899999874
No 198
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=81.28 E-value=4 Score=31.36 Aligned_cols=52 Identities=13% Similarity=0.185 Sum_probs=38.0
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEE
Q 041665 84 AILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFV 136 (206)
Q Consensus 84 ~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~ 136 (206)
....+++|...-..-- ....+++|++|.+.+...+++|+ .....+.+||++-
T Consensus 35 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGD-PAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp EEEEECTTCEEECTTS-BCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEECCCC-CCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 4556777776522222 34889999999999998887775 4567899999884
No 199
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=80.99 E-value=4.5 Score=31.08 Aligned_cols=51 Identities=20% Similarity=0.309 Sum_probs=36.8
Q ss_pred EEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEE
Q 041665 85 ILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFV 136 (206)
Q Consensus 85 ~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~ 136 (206)
...+++|...-.- ......+++|++|.+.+...+++|+ .....+.+||++-
T Consensus 31 ~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 82 (227)
T 3d0s_A 31 PVDFPRGHTVFAE-GEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFG 82 (227)
T ss_dssp EEEECTTCEEECT-TCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred EEEeCCCCEEEcC-CCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEe
Confidence 4567777765222 1234789999999999988877775 4567899999873
No 200
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=80.45 E-value=3.7 Score=30.98 Aligned_cols=49 Identities=14% Similarity=0.158 Sum_probs=34.1
Q ss_pred EecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEE
Q 041665 87 QFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFV 136 (206)
Q Consensus 87 ~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~ 136 (206)
.+++|...-.--. ....+++|++|.+.+...+++|+ .....+.+||++=
T Consensus 3 ~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 52 (195)
T 3b02_A 3 RFARKETIYLRGE-EARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFG 52 (195)
T ss_dssp EECTTCEEECTTS-BCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred EcCCCCEEECCCC-CCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEec
Confidence 3556654422112 24779999999999988777775 4567899999874
No 201
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=80.17 E-value=3.6 Score=32.00 Aligned_cols=116 Identities=9% Similarity=0.003 Sum_probs=70.3
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEEEC----CC--CeEEEEeCCCCccEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFVFP----KG--LVHYQYNSKANQPAA 155 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~~P----~g--~~H~~~N~g~~~~a~ 155 (206)
+....+++|...-.--. ....+++|++|.+++...+.+|+ .....+.+||++-.. .. ..+.+.... ++.
T Consensus 43 ~~~~~~~~ge~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~~---~~~ 118 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGN-PCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAHT---EVH 118 (232)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEESS---CEE
T ss_pred cEEEEECCCCEEECCCC-cccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEEcc---ceE
Confidence 45667788876532222 34789999999999987776664 456788999987322 21 344555543 444
Q ss_pred EEEEe-------cCCCcceeee----------------------------chhhhc----------CCCCHHHHHHHcCC
Q 041665 156 AISAF-------GSASAGTVSV----------------------------PTTVFA----------TGIDENILAKAFKT 190 (206)
Q Consensus 156 ~i~~~-------~s~~pg~~~~----------------------------~~~~f~----------~~~p~~vla~~f~~ 190 (206)
++.+- -..+|..... +..+.. -.++.+.+|..+|+
T Consensus 119 v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~t~~~lA~~lG~ 198 (232)
T 1zyb_A 119 TVCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQGEKTFKVKMDDLARCLDD 198 (232)
T ss_dssp EEEEEHHHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHHHHTTCSSSSSCEEEECCHHHHHHHHTS
T ss_pred EEEEEHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHhhcCCeEEecCCHHHHHHHhCC
Confidence 44432 1123322100 111110 13788999999999
Q ss_pred CHHHHHHHHhhc
Q 041665 191 DVTTIQKIKAGL 202 (206)
Q Consensus 191 ~~~~v~~l~~~~ 202 (206)
+++.+.++.+++
T Consensus 199 sr~tvsR~l~~l 210 (232)
T 1zyb_A 199 TRLNISKTLNEL 210 (232)
T ss_dssp CHHHHHHHHHHH
T ss_pred ChhHHHHHHHHH
Confidence 999888887765
No 202
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=80.10 E-value=8.8 Score=29.29 Aligned_cols=112 Identities=13% Similarity=0.115 Sum_probs=68.9
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEec-
Q 041665 84 AILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAFG- 161 (206)
Q Consensus 84 ~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~- 161 (206)
....+++|...-.--. ....+++|++|.+.+. .+.+|+ .....+.+||++-. ...+.+.... ++.++.+-.
T Consensus 28 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~~G~--~~~~~~~A~~---~~~v~~i~~~ 100 (220)
T 2fmy_A 28 REQRYSKKAILYTPNT-ERNLVFLVKSGRVRVY-LAYEDKEFTLAILEAGDIFCT--HTRAFIQAME---DTTILYTDIR 100 (220)
T ss_dssp EEEEECTTCEEECTTC-SSCEEEEEEESEEEEE-EECSSCEEEEEEEETTCEEES--CSSSEEEESS---SEEEEEEEHH
T ss_pred heeEeCCCCEEECCCC-CCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEeCC--ccceEEEEcC---cEEEEEEeHH
Confidence 4556777776522212 3478999999999994 666675 45678999998866 2334455543 445544321
Q ss_pred ------CCCcceeee----------------------------chhh----------------hcCCCCHHHHHHHcCCC
Q 041665 162 ------SASAGTVSV----------------------------PTTV----------------FATGIDENILAKAFKTD 191 (206)
Q Consensus 162 ------s~~pg~~~~----------------------------~~~~----------------f~~~~p~~vla~~f~~~ 191 (206)
.++|..... +..+ +.-.++.+.+|..+|++
T Consensus 101 ~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~g~~~~~~~~~~~~~t~~~lA~~lg~s 180 (220)
T 2fmy_A 101 NFQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLELGLNTEEIALMLGTT 180 (220)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCEEETTEEEEECSSCHHHHHHHHTSC
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCCc
Confidence 123432100 0000 11257889999999999
Q ss_pred HHHHHHHHhhc
Q 041665 192 VTTIQKIKAGL 202 (206)
Q Consensus 192 ~~~v~~l~~~~ 202 (206)
++.+.++.+++
T Consensus 181 r~tvsR~l~~l 191 (220)
T 2fmy_A 181 RQTVSVLLNDF 191 (220)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988887765
No 203
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=79.81 E-value=1.3 Score=37.28 Aligned_cols=45 Identities=24% Similarity=0.269 Sum_probs=33.9
Q ss_pred CcEEEEEEe-eEEEEEEEeC-----------CCc------EEEEEEcCCCEEEECCCCeEEEE
Q 041665 102 SAELLFVVS-GILEVGFIDT-----------TNK------LYTQTLQIGDMFVFPKGLVHYQY 146 (206)
Q Consensus 102 a~E~~yVl~-G~~~~~~~~~-----------~~~------~~~~~L~~GD~~~~P~g~~H~~~ 146 (206)
-.|.+|++. .++.+++... ++. +-...|++||.+++|+|.+|.+-
T Consensus 117 KpE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 117 VESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp CCEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEE
T ss_pred CcEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcC
Confidence 489999998 4555554422 123 45789999999999999999884
No 204
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=79.63 E-value=5.8 Score=31.56 Aligned_cols=52 Identities=21% Similarity=0.349 Sum_probs=38.3
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEE
Q 041665 84 AILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFV 136 (206)
Q Consensus 84 ~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~ 136 (206)
....+++|...-.--- ....+++|++|.+++...+.+|+ .....+.+||++-
T Consensus 70 ~~~~~~~ge~i~~~G~-~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~G 122 (260)
T 3kcc_A 70 HIHKYPSKSTLIHQGE-KAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 122 (260)
T ss_dssp EEEEECTTCEEECTTC-BCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred EEEEECCCCEEECCCC-cCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEe
Confidence 4566788876522222 34789999999999998877775 4577899999874
No 205
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=79.18 E-value=1.6 Score=31.20 Aligned_cols=52 Identities=10% Similarity=0.219 Sum_probs=34.0
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMF 135 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~ 135 (206)
+....+++|...-..-. ....+.+|++|.+++...+++|+ .....+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGE-PAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCC-ccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 34566777776532222 34789999999999976655554 345688899976
No 206
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=78.42 E-value=5.3 Score=31.32 Aligned_cols=53 Identities=9% Similarity=0.161 Sum_probs=39.0
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFV 136 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~ 136 (206)
+....+++|...-.--- ....+++|++|.+++...+++|+ .....+.+||++-
T Consensus 43 ~~~~~~~~ge~i~~~G~-~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G 96 (243)
T 3la7_A 43 PVVETFERNKTIFFPGD-PAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFG 96 (243)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEES
T ss_pred heeEEECCCCEEEcCCC-CCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEc
Confidence 44667888886532222 34789999999999998888775 4567899999873
No 207
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=77.82 E-value=3.9 Score=31.37 Aligned_cols=52 Identities=15% Similarity=0.320 Sum_probs=37.6
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMF 135 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~ 135 (206)
+....+++|...-..-. ....+++|++|.+++...+++|+ .....+.+||++
T Consensus 22 ~~~~~~~~g~~i~~~G~-~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 22 GKVIVFRKGEIVKHQDD-PIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQII 74 (213)
T ss_dssp SEEEEECTTCEEECTTC-BCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEES
T ss_pred cEEEEECCCCEEEcCCC-ccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEe
Confidence 34566778876533222 34789999999999988877775 456789999987
No 208
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=77.23 E-value=3.7 Score=31.75 Aligned_cols=52 Identities=8% Similarity=0.140 Sum_probs=33.8
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMF 135 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~ 135 (206)
.....+++|...-..-. ....+++|++|.+.+...+++|+ .....+.+||++
T Consensus 33 ~~~~~~~~g~~i~~~g~-~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 85 (232)
T 2gau_A 33 IQPFPCKKASTVFSEGD-IPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFF 85 (232)
T ss_dssp CEEEEECTTCEEECTTC-CCCEEEEEEESCEEEEC-----CCCEEEEECTTCEE
T ss_pred CeEEEECCCCEEEeCCC-CCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 45566778876522222 34789999999999987666663 457789999987
No 209
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=76.58 E-value=6 Score=31.06 Aligned_cols=116 Identities=12% Similarity=0.122 Sum_probs=70.1
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEEE--CCCCeEEEEeCCCCccEEEEEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFVF--PKGLVHYQYNSKANQPAAAISA 159 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~~--P~g~~H~~~N~g~~~~a~~i~~ 159 (206)
+....+++|...-.--- ....+++|++|.+++...+++|+ .....+.+||++-. .....+.+... + ++.++.+
T Consensus 32 ~~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~~~~~~~A~--~-~~~v~~i 107 (250)
T 3e6c_C 32 GLIRDFAKGSAVIMPGE-EITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAM--E-PTRTCWF 107 (250)
T ss_dssp SEEEEECTTCEEECTTC-CCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCSCCEEEEES--S-SEEEEEE
T ss_pred CeEEEECCCCEEECCCC-CCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCCCceEEEEc--c-cEEEEEE
Confidence 34556777776522222 34789999999999998877775 35678999998742 22233444443 3 4455443
Q ss_pred ec-------CCCcceeee----------------------------chhh----------------hcCCCCHHHHHHHc
Q 041665 160 FG-------SASAGTVSV----------------------------PTTV----------------FATGIDENILAKAF 188 (206)
Q Consensus 160 ~~-------s~~pg~~~~----------------------------~~~~----------------f~~~~p~~vla~~f 188 (206)
-. ..+|..... +..+ +.-.++.+-+|..+
T Consensus 108 ~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~~~t~~~iA~~l 187 (250)
T 3e6c_C 108 SEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEIT 187 (250)
T ss_dssp CHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCEEETTEEEEECCCCHHHHHHHH
T ss_pred cHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCcEecCCCCHHHHHHHh
Confidence 11 113322100 0011 11257888899999
Q ss_pred CCCHHHHHHHHhhc
Q 041665 189 KTDVTTIQKIKAGL 202 (206)
Q Consensus 189 ~~~~~~v~~l~~~~ 202 (206)
|++++.+.++.+++
T Consensus 188 G~sr~tvsR~l~~L 201 (250)
T 3e6c_C 188 GVHHVTVSRVLASL 201 (250)
T ss_dssp TCCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH
Confidence 99999888887765
No 210
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=76.52 E-value=5.7 Score=30.23 Aligned_cols=115 Identities=14% Similarity=0.096 Sum_probs=69.9
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEEEC-----CC--CeEEEEeCCCCccEE
Q 041665 84 AILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFVFP-----KG--LVHYQYNSKANQPAA 155 (206)
Q Consensus 84 ~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~~P-----~g--~~H~~~N~g~~~~a~ 155 (206)
....+++|...-..-. ....+.+|++|.+.+...+++|+ .....+.+||++.+. .+ ..+.+... + ++.
T Consensus 27 ~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a~--~-~~~ 102 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGNM-DCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEAE--K-DTD 102 (220)
T ss_dssp EEEEECTTCEEEEGGG-CCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEES--S-CEE
T ss_pred ceEEeCCCCEEECCCC-CcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEEe--e-eeE
Confidence 4566777776522222 34789999999999998887775 456788999996321 22 23344444 3 445
Q ss_pred EEEEec-------CCCcceeee----------------------------chh------hhc---CCCCHHHHHHHcCCC
Q 041665 156 AISAFG-------SASAGTVSV----------------------------PTT------VFA---TGIDENILAKAFKTD 191 (206)
Q Consensus 156 ~i~~~~-------s~~pg~~~~----------------------------~~~------~f~---~~~p~~vla~~f~~~ 191 (206)
++.+-. ..+|..... +.. ..+ -.++.+-+|..+|++
T Consensus 103 ~~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~s 182 (220)
T 3dv8_A 103 LWIIPAEIYKGIMKDSAPVANYTNELMATRFSDVMWLIEQIMWKSLDKRVASFLLEETSIEGTNELKITHETIANHLGSH 182 (220)
T ss_dssp EEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSSEECCCHHHHHHHHTCC
T ss_pred EEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCceecCCHHHHHHHhCCC
Confidence 554321 123322100 000 011 157889999999999
Q ss_pred HHHHHHHHhhc
Q 041665 192 VTTIQKIKAGL 202 (206)
Q Consensus 192 ~~~v~~l~~~~ 202 (206)
++.+.++.+++
T Consensus 183 r~tvsR~l~~L 193 (220)
T 3dv8_A 183 REVITRMLRYF 193 (220)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988887765
No 211
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=76.51 E-value=5.2 Score=30.24 Aligned_cols=49 Identities=14% Similarity=0.261 Sum_probs=34.6
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMF 135 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 135 (206)
+....+.||...-..-. ....+.+|++|++.+.. .+|+ ....+.+||++
T Consensus 94 ~~~~~~~~ge~I~~~G~-~~~~ly~I~~G~v~~~~--~~g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQEGT-FGDRMFFIQQGIVDIIM--SDGV-IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEECTTS-CCSEEEEEEECCEEEEC--TTSC-EEEEECTTCEE
T ss_pred ccceeeCCCCEEEECCC-cCcEEEEEEeCEEEEEe--cCCe-EEEEecCCCEe
Confidence 45566778876522222 34789999999998864 4566 46789999976
No 212
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=76.44 E-value=6.7 Score=30.56 Aligned_cols=71 Identities=14% Similarity=0.078 Sum_probs=43.8
Q ss_pred EEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEE-EEEEcCCCEEEECC---CC----eEEEEeCCCCccEEE
Q 041665 85 ILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLY-TQTLQIGDMFVFPK---GL----VHYQYNSKANQPAAA 156 (206)
Q Consensus 85 ~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~-~~~L~~GD~~~~P~---g~----~H~~~N~g~~~~a~~ 156 (206)
...+++|...-.- -.....+++|++|.+++...+.+|+.. ...+ +||++-... +. .+...... + ++.+
T Consensus 20 ~~~~~~ge~i~~~-G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~-~~~v 95 (238)
T 2bgc_A 20 PKQFHKKELIFNQ-WDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-E-QATA 95 (238)
T ss_dssp CEEEETTCEEECT-TCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-S-EEEE
T ss_pred EEEECCCCEEEeC-CCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-c-ceEE
Confidence 3456676654221 223478999999999998888778643 3445 999875442 22 45555554 4 5555
Q ss_pred EEE
Q 041665 157 ISA 159 (206)
Q Consensus 157 i~~ 159 (206)
+.+
T Consensus 96 ~~i 98 (238)
T 2bgc_A 96 YVI 98 (238)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 213
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=75.43 E-value=5.9 Score=32.54 Aligned_cols=51 Identities=18% Similarity=0.201 Sum_probs=37.7
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEE
Q 041665 84 AILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMF 135 (206)
Q Consensus 84 ~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 135 (206)
....+++|...-.--. ....+.+|++|.+++...+.+|+.....+.+||++
T Consensus 37 ~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 37 QPLRAAAGQVLLRQGE-PAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp EEEEECTTCEEECTTS-BCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred eEEEECCCCEEEeCCC-cCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 4566777775422112 24789999999999988887787677889999987
No 214
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=73.35 E-value=2.8 Score=36.62 Aligned_cols=23 Identities=17% Similarity=0.141 Sum_probs=20.4
Q ss_pred EEEEEEcCCCEEEECCCCeEEEE
Q 041665 124 LYTQTLQIGDMFVFPKGLVHYQY 146 (206)
Q Consensus 124 ~~~~~L~~GD~~~~P~g~~H~~~ 146 (206)
+-...|++||.+++|+|.+|.+-
T Consensus 239 Ln~v~l~pGd~~fipAG~~HAy~ 261 (394)
T 2wfp_A 239 LNVVKLNPGEAMFLFAETPHAYL 261 (394)
T ss_dssp EEEEEECTTCEEEECTTCCEEEE
T ss_pred heEEECCCCCEEEcCCCCceEcC
Confidence 34788999999999999999875
No 215
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=72.87 E-value=6.6 Score=29.79 Aligned_cols=48 Identities=21% Similarity=0.282 Sum_probs=32.7
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMF 135 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 135 (206)
+....+.||...-..-. ....+.+|++|.+.+. ..+|+ ...+.+||++
T Consensus 95 ~~~~~~~~ge~I~~~g~-~~~~ly~I~~G~v~v~--~~~g~--~~~l~~G~~f 142 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGT-IGKKMYFIQHGVVSVL--TKGNK--EMKLSDGSYF 142 (202)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEECEEEEE--CTTSC--CEEEETTCEE
T ss_pred CCceEECCCCEEEECCC-cCCeEEEEeccEEEEE--ECCCe--EEEEcCCCEe
Confidence 34556778776532222 2478999999999885 34555 3578999976
No 216
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=72.01 E-value=14 Score=29.41 Aligned_cols=52 Identities=19% Similarity=0.178 Sum_probs=37.4
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCC--cEEEEEEcCCCEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTN--KLYTQTLQIGDMF 135 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~--~~~~~~L~~GD~~ 135 (206)
+....+.+|...-..-. .+..+.+|++|++.+.....+| ......+.+||++
T Consensus 180 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQGE-PGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeCCc-cCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 45667788876533323 3488999999999998765554 2457889999987
No 217
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=70.10 E-value=8.8 Score=28.89 Aligned_cols=113 Identities=13% Similarity=0.156 Sum_probs=66.8
Q ss_pred EEEecCCCcCCCccCCCC--cEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEEE----CCCCeEEEEeCCCCccEEEE
Q 041665 85 ILQFPAGAINPPHTHPRS--AELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFVF----PKGLVHYQYNSKANQPAAAI 157 (206)
Q Consensus 85 ~~~l~pg~~~~~H~H~~a--~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~~----P~g~~H~~~N~g~~~~a~~i 157 (206)
...+++|...-.. .... ..+++|++|.+.+...+++|+ .....+.+||++-. .....+.+... + ++.++
T Consensus 7 ~~~~~~g~~i~~~-g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~--~-~~~v~ 82 (202)
T 2zcw_A 7 TVSFKAGDVILYP-GVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAA--T-DVRLE 82 (202)
T ss_dssp CEEECTTCEEECS-BSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEES--S-CEEEE
T ss_pred EEEECCCCEEECC-CCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEc--c-cEEEE
Confidence 3456676654221 1234 568999999999988877775 45678999998743 12233445554 3 45555
Q ss_pred EEecCC-Ccceee-e---------------------------chhhh---------------cCCCCHHHHHHHcCCCHH
Q 041665 158 SAFGSA-SAGTVS-V---------------------------PTTVF---------------ATGIDENILAKAFKTDVT 193 (206)
Q Consensus 158 ~~~~s~-~pg~~~-~---------------------------~~~~f---------------~~~~p~~vla~~f~~~~~ 193 (206)
.+ ... .|.... + +..+. .-.++.+.+|..+|++++
T Consensus 83 ~i-~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~lg~sr~ 161 (202)
T 2zcw_A 83 PL-PENPDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHEEEGKVVLKATHDELAAAVGSVRE 161 (202)
T ss_dssp EC-CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHHHTCCHH
T ss_pred EE-hHhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCcEEccCCCHHHHHHHhCCCHH
Confidence 54 222 122110 0 00110 013778889999999999
Q ss_pred HHHHHHhhc
Q 041665 194 TIQKIKAGL 202 (206)
Q Consensus 194 ~v~~l~~~~ 202 (206)
.+.++.+++
T Consensus 162 tvsR~l~~L 170 (202)
T 2zcw_A 162 TVTKVIGEL 170 (202)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888877765
No 218
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=67.32 E-value=12 Score=31.33 Aligned_cols=67 Identities=16% Similarity=0.034 Sum_probs=41.2
Q ss_pred EEecCCCcCCCc-cCCCCcEEEE-EEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCe-EEEEeCC-CCccEEEEEE
Q 041665 86 LQFPAGAINPPH-THPRSAELLF-VVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLV-HYQYNSK-ANQPAAAISA 159 (206)
Q Consensus 86 ~~l~pg~~~~~H-~H~~a~E~~y-Vl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~-H~~~N~g-~~~~a~~i~~ 159 (206)
++|+.|....-. .-.+ .|+.+ .+.|++++.+.++ ++.|...|.+|+|.|.- -.+...+ .. ++++..+
T Consensus 62 l~L~~~~~~~~~~fl~~-rE~~iV~lgG~~~V~vdg~-----~f~lg~~dalYVp~G~~~v~~as~d~~~-~a~fav~ 132 (289)
T 1ywk_A 62 LEIILDKELGVDYFLER-RELGVINIGGPGFIEIDGA-----KETMKKQDGYYIGKETKHVRFSSENPDN-PAKFYIS 132 (289)
T ss_dssp EECCCSGGGTSSSTTTT-EEEEEEECSSCEEEEETTE-----EEEECTTCEEEECTTCCCEEEEESCTTS-CCCEEEE
T ss_pred EEcCCCceecccccCCC-cEEEEEEccCeEEEEECCE-----EEecCCCCEEEeCCCCeEEEEEecCCCC-CeEEEEE
Confidence 445555444333 2344 66655 4578888887554 67999999999999965 3343322 34 4555543
No 219
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=66.18 E-value=4.1 Score=36.12 Aligned_cols=22 Identities=14% Similarity=0.105 Sum_probs=19.7
Q ss_pred EEEEcCCCEEEECCCCeEEEEe
Q 041665 126 TQTLQIGDMFVFPKGLVHYQYN 147 (206)
Q Consensus 126 ~~~L~~GD~~~~P~g~~H~~~N 147 (206)
...|++||.+++|+|.+|.+..
T Consensus 267 ~v~L~pGea~flpAg~~HAYl~ 288 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYIS 288 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEEE
T ss_pred eEecCCCCEEecCCCCccccCC
Confidence 5679999999999999998864
No 220
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=65.04 E-value=12 Score=31.96 Aligned_cols=37 Identities=19% Similarity=0.178 Sum_probs=30.2
Q ss_pred cEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEEe
Q 041665 123 KLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISAF 160 (206)
Q Consensus 123 ~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~~ 160 (206)
.++..+=++||.+++++|..|+..|.|-. ..+.+-+.
T Consensus 277 Pvyr~~QkpGd~Vi~~PgayH~v~n~G~~-~n~awN~a 313 (332)
T 2xxz_A 277 PVYRFVQRPGDLVWINAGTVHWVQATGWC-NNIAWNVG 313 (332)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESSSE-EEEEEEEE
T ss_pred CeEEEEECCCCEEEECCCceEEEEeccee-eEEEEEeC
Confidence 35678899999999999999999999976 55555443
No 221
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=63.82 E-value=13 Score=28.44 Aligned_cols=64 Identities=9% Similarity=0.060 Sum_probs=46.1
Q ss_pred CCccCCCCcEEEEEEeeEEEEEEEeCCC------cEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEE
Q 041665 95 PPHTHPRSAELLFVVSGILEVGFIDTTN------KLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISA 159 (206)
Q Consensus 95 ~~H~H~~a~E~~yVl~G~~~~~~~~~~~------~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~ 159 (206)
..-.|+..+|.+.-+.|...+-++.+++ +...+.+..|+.+...+|++|...-.-++ +..++++
T Consensus 70 ~lERHp~~sQafiPl~~~~~lVvVA~~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~-~~~F~vv 139 (168)
T 1xsq_A 70 ELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQR-VTDFLTI 139 (168)
T ss_dssp EEEECTTBCEEEEESBCCCCEEEEEECSSSCEEEEEEEEECCSSCEEEECTTCEECCCCBSSS-CEEEEEE
T ss_pred EEeeCCCCceEEEECCCCEEEEEEeCCCCCCChhheEEEEecCCeEEEeCCCceecccccCCC-cceEEEE
Confidence 3456788899998899986544443332 46788999999999999999996544445 5555544
No 222
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=63.55 E-value=12 Score=32.16 Aligned_cols=54 Identities=20% Similarity=0.167 Sum_probs=38.8
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc---EEEEEEcCCCEEEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK---LYTQTLQIGDMFVF 137 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~---~~~~~L~~GD~~~~ 137 (206)
+....+++|...-.- ......+++|++|.+.+...+.+|+ .....+.+||++--
T Consensus 65 ~~~~~~~~g~~i~~~-Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 65 GYYENLEKGITLFRQ-GDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE 121 (469)
T ss_dssp CEEEEECTTCEEECT-TSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred ceEEEECCCCEEEeC-CCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcch
Confidence 345577888765222 2234889999999999988777763 56789999998743
No 223
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=63.37 E-value=23 Score=25.06 Aligned_cols=49 Identities=29% Similarity=0.259 Sum_probs=32.5
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEE
Q 041665 84 AILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVF 137 (206)
Q Consensus 84 ~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~ 137 (206)
....+++|...-.- ......+.+|++|.+++.. . + .....+.+||++-.
T Consensus 51 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~--~-~-~~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 51 QTVHCAPGDLIYHA-GESVDSLCFVVSGSLEVIQ--D-D-EVVAILGKGDVFGD 99 (160)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEE--T-T-EEEEEEETTCEEEC
T ss_pred eeeeeCCCCEEEeC-CCCccEEEEEEeeEEEEEE--C-C-EEEEEecCCCEeCc
Confidence 34566777654221 1235899999999999865 1 2 34678999998743
No 224
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=62.80 E-value=8.3 Score=26.91 Aligned_cols=47 Identities=21% Similarity=0.348 Sum_probs=31.4
Q ss_pred EEEEec-CCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEE
Q 041665 84 AILQFP-AGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMF 135 (206)
Q Consensus 84 ~~~~l~-pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 135 (206)
....++ +|...-.- ......+++|++|.+++. ..+|+. ..+.+||++
T Consensus 40 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~--~~~g~~--~~l~~G~~f 87 (134)
T 2d93_A 40 IFEVVEQAGAIILED-GQELDSWYVILNGTVEIS--HPDGKV--ENLFMGNSF 87 (134)
T ss_dssp EEEEECSSSCEEECT-TCEECEEEECCBSCEEEE--CSSSCE--EEECTTCEE
T ss_pred eEEEecCCCCEEEeC-CCCCCeEEEEEeCEEEEE--cCCCcE--EEecCCCcc
Confidence 455667 66654221 223477899999999986 355664 679999976
No 225
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=62.58 E-value=23 Score=30.54 Aligned_cols=51 Identities=6% Similarity=0.006 Sum_probs=36.8
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMF 135 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~ 135 (206)
+....+++|...-..-. ....+++|++|.+.+.. ..+|+ .....+.+||++
T Consensus 168 ~~~~~~~~Ge~I~~qGd-~~d~~YiI~sG~v~v~~-~~~G~~~~v~~l~~G~~f 219 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGD-DGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 219 (416)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEECEEEEEE-ECSSCEEEEEEEESCCEE
T ss_pred cEEEEeCCCCEEEeCCC-CCceEEEEEeeEEEEEE-ecCCCEEEEEEecCCCEE
Confidence 45677888886533333 34889999999999987 44553 456789999976
No 226
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=61.93 E-value=18 Score=25.14 Aligned_cols=47 Identities=13% Similarity=0.088 Sum_probs=31.8
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEE
Q 041665 84 AILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMF 135 (206)
Q Consensus 84 ~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 135 (206)
....+++|...-.- ......+.+|++|.+++.- +|+ ....+.+||++
T Consensus 47 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~---~g~-~~~~~~~G~~f 93 (139)
T 3ocp_A 47 YPVEYGKDSCIIKE-GDVGSLVYVMEDGKVEVTK---EGV-KLCTMGPGKVF 93 (139)
T ss_dssp EEEEECSSCEEECT-TSCCCEEEEEEECCEEEEE---TTE-EEEEECTTCEE
T ss_pred EEEecCCCCEEEeC-CCcCCEEEEEEeCEEEEEE---CCE-EEEEeCCCCEe
Confidence 45667777754222 1235889999999999842 444 46788999985
No 227
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=60.36 E-value=20 Score=27.69 Aligned_cols=64 Identities=8% Similarity=0.015 Sum_probs=46.1
Q ss_pred CCccCCCCcEEEEEEeeEEEEEEEeCCC------cEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEE
Q 041665 95 PPHTHPRSAELLFVVSGILEVGFIDTTN------KLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISA 159 (206)
Q Consensus 95 ~~H~H~~a~E~~yVl~G~~~~~~~~~~~------~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~ 159 (206)
..-.|+..+|.+.-+.|...+-++..++ +...+....|+.+...+|++|...-.-++ +..++++
T Consensus 72 ~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~-~~dF~vv 141 (175)
T 2bdr_A 72 MLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIEK-RDDFLVV 141 (175)
T ss_dssp EEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESSS-EEEEEEE
T ss_pred EEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCCC-CceEEEE
Confidence 3456888899999999976554444432 56799999999999999999966444344 4555443
No 228
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=59.85 E-value=26 Score=24.92 Aligned_cols=48 Identities=17% Similarity=0.277 Sum_probs=33.1
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMF 135 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 135 (206)
+....+++|...-.--. ....+.+|++|.+.+.. +|+ ....+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~---~~~-~~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQQGD-EGDNFYVIDQGEMDVYV---NNE-WATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEESCEEEEE---TTE-EEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCC-CCCeEEEEEecEEEEEE---CCE-EEEEecCCCEe
Confidence 34567788876522222 35889999999999875 344 35678999985
No 229
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=58.06 E-value=18 Score=28.91 Aligned_cols=52 Identities=19% Similarity=0.323 Sum_probs=36.2
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEe-CCCc-EEEEEEcCCCEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFID-TTNK-LYTQTLQIGDMF 135 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~-~~~~-~~~~~L~~GD~~ 135 (206)
+....+.+|...-.-- .....+.+|++|++++.... .+|+ .....+.+||++
T Consensus 180 ~~~~~~~~g~~I~~~G-~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 180 LEETHYENGEYIIRQG-ARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp CEEEEECTTCEEECTT-CEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred ccEEEECCCCEEEeCC-CCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 3456677777542221 23478999999999998766 3453 457789999987
No 230
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=57.57 E-value=15 Score=30.64 Aligned_cols=51 Identities=16% Similarity=0.048 Sum_probs=34.3
Q ss_pred cEEEE-EEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCe-EEEEeC-CCCccEEEEEE
Q 041665 103 AELLF-VVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLV-HYQYNS-KANQPAAAISA 159 (206)
Q Consensus 103 ~E~~y-Vl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~-H~~~N~-g~~~~a~~i~~ 159 (206)
.|+.+ .+.|++++.+.++ ++.|...|.+|+|.|.- -.+... ... ++++..+
T Consensus 79 rE~~iV~l~G~~~V~vdG~-----~f~lg~~dalYVp~g~~~v~~as~da~~-~a~fav~ 132 (282)
T 1xru_A 79 RELGVINIGGAGTITVDGQ-----CYEIGHRDALYVGKGAKEVVFASIDTGT-PAKFYYN 132 (282)
T ss_dssp EEEEEEECSSCEEEEETTE-----EEEECTTCEEEECTTCCCEEEEESCTTS-CCCEEEE
T ss_pred cEEEEEEccCeEEEEECCE-----EEecCCCCEEEeCCCCeEEEEEecCCCC-CeEEEEE
Confidence 56555 5678888887554 67999999999999985 344333 223 4555443
No 231
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=57.19 E-value=33 Score=28.46 Aligned_cols=48 Identities=15% Similarity=0.105 Sum_probs=36.4
Q ss_pred eEEEEEEEecCCCcC-CCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEE
Q 041665 80 SVSTAILQFPAGAIN-PPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKGLVHY 144 (206)
Q Consensus 80 gi~~~~~~l~pg~~~-~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g~~H~ 144 (206)
|.....+.+.||... ..-.|+- .|=+|+++|.+ ..|+.++-|+|+.|.
T Consensus 216 G~~TrLlr~~Pg~dt~~v~iHdy-~EEvY~LeG~~----------------d~G~Y~~RPpg~~HG 264 (303)
T 2qdr_A 216 GGGVWLLAILPHFDNKYQMIQPY-NEEGYCLTGYC----------------DVGDYRIVKDHYWYC 264 (303)
T ss_dssp SCEEEEEEECSSEECCSEEEECS-CEEEEEEEEEE----------------EETTEEEETTEEEEE
T ss_pred CCeEEEEEECCCCCCCCceeecc-ceeEEEEeeec----------------cCceeeEcCCCCccC
Confidence 456777888888765 3334654 77789999976 348899999999998
No 232
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=55.45 E-value=3.2 Score=31.88 Aligned_cols=53 Identities=9% Similarity=0.182 Sum_probs=35.9
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCc-EEEEEEcCCCEEEE
Q 041665 84 AILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNK-LYTQTLQIGDMFVF 137 (206)
Q Consensus 84 ~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~L~~GD~~~~ 137 (206)
....+++|...-..-. ....+++|++|.+.+...+++|+ .....+.+||++-.
T Consensus 33 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~ 86 (227)
T 3dkw_A 33 DLVNLDKGAYVFRQGE-PAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAE 86 (227)
T ss_dssp EEEECCTTEEEECTTS-BCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESC
T ss_pred EEEEECCCCEEEcCCC-ccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeee
Confidence 4456677765422222 34789999999999887666663 34567889998753
No 233
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=54.65 E-value=12 Score=26.02 Aligned_cols=45 Identities=27% Similarity=0.366 Sum_probs=30.4
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEE
Q 041665 84 AILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMF 135 (206)
Q Consensus 84 ~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 135 (206)
....+++|...-..-. ....+.+|++|.+++...+ ...+.+||++
T Consensus 35 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~------~~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGE-PGDRMFFVVEGSVSVATPN------PVELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTS-CCCEEEEEEESCEEECSSS------CEEECTTCEE
T ss_pred cEEEeCCCCEEEeCCC-CcceEEEEEeeEEEEEeCC------cceECCCCEe
Confidence 4566778876532222 3478999999999886432 2578888875
No 234
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=54.48 E-value=28 Score=25.84 Aligned_cols=54 Identities=15% Similarity=0.079 Sum_probs=39.1
Q ss_pred CCCccCCCCcEEEEEEeeEEEEEEEeCC--------------------C-cEEEEEEcCCCEEEECCCCeEEEEe
Q 041665 94 NPPHTHPRSAELLFVVSGILEVGFIDTT--------------------N-KLYTQTLQIGDMFVFPKGLVHYQYN 147 (206)
Q Consensus 94 ~~~H~H~~a~E~~yVl~G~~~~~~~~~~--------------------~-~~~~~~L~~GD~~~~P~g~~H~~~N 147 (206)
..+-.|.+-..+-|+++|+=++++.... + ......|++|+.++|-++.+|+...
T Consensus 60 ~~~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~~ 134 (155)
T 1s4c_A 60 KKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPCC 134 (155)
T ss_dssp SCEEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEEE
T ss_pred cccccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCccccccc
Confidence 3555666678999999998777765311 1 1135688999999999999998754
No 235
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=53.38 E-value=19 Score=32.77 Aligned_cols=36 Identities=19% Similarity=0.195 Sum_probs=29.8
Q ss_pred cEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEE
Q 041665 123 KLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISA 159 (206)
Q Consensus 123 ~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~ 159 (206)
.++..+=++||.+++++|..|+..|.|-. ..+.+-+
T Consensus 336 Pvyr~vQkpGd~Vi~~PgayH~v~n~G~~-~n~awN~ 371 (531)
T 3avr_A 336 PVYRFIQRPGDLVWINAGTVHWVQAIGWC-NNIAWNV 371 (531)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESSSE-EEEEEEE
T ss_pred CeEEEEECCCCEEEECCCceEEEEeccee-eeeEEEe
Confidence 34678999999999999999999999976 5555544
No 236
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=52.89 E-value=83 Score=24.79 Aligned_cols=66 Identities=11% Similarity=0.186 Sum_probs=48.0
Q ss_pred EEEEEEecCCC-cCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcC----CC--EEEECCCCeEEEEeC
Q 041665 82 STAILQFPAGA-INPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQI----GD--MFVFPKGLVHYQYNS 148 (206)
Q Consensus 82 ~~~~~~l~pg~-~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~----GD--~~~~P~g~~H~~~N~ 148 (206)
+....-+.++. ...||.- +++|+.+-..|.....+..++|+..+..|.+ |+ -++||+|.....+..
T Consensus 80 TaIYfLL~~~~~~S~wHRv-~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~ 152 (203)
T 1xe7_A 80 TLIYYLLTPDSPIGKFHKN-INRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLL 152 (203)
T ss_dssp EEEEEEEBTTBCEEEEEEE-SSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCEEEEEEC
T ss_pred eEEEEEEcCCCCcccceee-CCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEEEEeEec
Confidence 44455567665 4566655 6799999999965555677778776777764 44 589999999988765
No 237
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=52.01 E-value=14 Score=33.29 Aligned_cols=85 Identities=15% Similarity=0.097 Sum_probs=53.4
Q ss_pred ccccCCCCCCeEEEEEEEecCCCcCCCccCC-CCcEEEEEEeeEEEEEEEeC----------------------------
Q 041665 70 MAEFPALNGQSVSTAILQFPAGAINPPHTHP-RSAELLFVVSGILEVGFIDT---------------------------- 120 (206)
Q Consensus 70 ~~~~P~l~~~gi~~~~~~l~pg~~~~~H~H~-~a~E~~yVl~G~~~~~~~~~---------------------------- 120 (206)
....||+|...+.+ -.+|...+||.=. .-.-+-|-+-|.-.+++.-+
T Consensus 228 ~~~I~GVNtpqLYi----gm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l~~k~~~d~l~~~~~pspe 303 (510)
T 4ask_A 228 GHTILGMNTVQLYM----KVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSWWPILD 303 (510)
T ss_dssp SSCCTTTTSCEEEE----ECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTTCCTTTSCBCCCHH
T ss_pred CCcCCCcChhheEE----ccccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHHHHHhCcchhhccccCCHH
Confidence 44667777654433 2467777887521 12344455555443333321
Q ss_pred ----CC-cEEEEEEcCCCEEEECCCCeEEEEeCCCCccEEEEEE
Q 041665 121 ----TN-KLYTQTLQIGDMFVFPKGLVHYQYNSKANQPAAAISA 159 (206)
Q Consensus 121 ----~~-~~~~~~L~~GD~~~~P~g~~H~~~N~g~~~~a~~i~~ 159 (206)
.| .++..+=++||.+++++|..|+..|.|-. ..+.+-+
T Consensus 304 ~L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~-~niaWNv 346 (510)
T 4ask_A 304 DLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWC-NNIAWNV 346 (510)
T ss_dssp HHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSE-EEEEEEE
T ss_pred HHHhCCCCeEEEEECCCCEEEECCCceEEEEecCee-eeeEEEe
Confidence 13 34578899999999999999999999976 5554444
No 238
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=50.67 E-value=12 Score=29.49 Aligned_cols=34 Identities=15% Similarity=0.083 Sum_probs=26.9
Q ss_pred cEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEEECCC
Q 041665 103 AELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFVFPKG 140 (206)
Q Consensus 103 ~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~~P~g 140 (206)
.-++|+++|++.+...+ + ....|.+||.+++...
T Consensus 141 ~~~v~~l~G~~~v~~~~--~--~~~~L~~~d~l~~~~~ 174 (200)
T 1yll_A 141 TLLLFAQQDGVAISLQG--Q--PRGQLAAHDCLCAEGL 174 (200)
T ss_dssp EEEEEESSSCEEEEETT--E--EEEEECTTCEEEEESC
T ss_pred EEEEEEccCcEEEEcCC--C--ceeecCCCCEEEEeCC
Confidence 78999999999886531 1 2689999999998664
No 239
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=50.60 E-value=14 Score=28.34 Aligned_cols=47 Identities=15% Similarity=0.183 Sum_probs=32.3
Q ss_pred EEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEE
Q 041665 84 AILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMF 135 (206)
Q Consensus 84 ~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 135 (206)
....+++|...-.--. ..+.+.+|++|++.+.. +++. ...+.+||.+
T Consensus 31 ~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~v~~---~~~~-~~~~~~g~~f 77 (246)
T 3of1_A 31 EEKSVPKGATIIKQGD-QGDYFYVVEKGTVDFYV---NDNK-VNSSGPGSSF 77 (246)
T ss_dssp EEEEECTTCEEECTTC-CCCEEEEEEECCEEEES---TTSC-CEEECTTCEE
T ss_pred ceEEECCCCEEEecCC-CCCEEEEEEeeEEEEEE---CCEE-EEecCCCCee
Confidence 4566777776522223 34899999999999864 2332 4789999987
No 240
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=50.39 E-value=19 Score=27.31 Aligned_cols=49 Identities=22% Similarity=0.182 Sum_probs=33.9
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFV 136 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~ 136 (206)
+....+.||...-.--- ....+.+|++|++.+.. +| .....+.+||++=
T Consensus 98 ~~~~~~~~ge~I~~~G~-~~~~ly~I~~G~v~v~~---~~-~~~~~l~~G~~fG 146 (212)
T 3ukn_A 98 IKTSFCAPGEFLIRQGD-ALQAIYFVCSGSMEVLK---DN-TVLAILGKGDLIG 146 (212)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEECCEEEES---SS-CEEEEECTTCEEE
T ss_pred hheEEeCCCCEEEECCC-cccEEEEEEecEEEEEE---CC-eEEEEecCCCCcC
Confidence 44567788886522222 25899999999998864 23 3367899999874
No 241
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=47.91 E-value=28 Score=26.56 Aligned_cols=49 Identities=12% Similarity=0.162 Sum_probs=32.8
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMF 135 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 135 (206)
+....+.+|...-..- ..+..+.+|.+|++++...+. + ....+.+||++
T Consensus 148 ~~~~~~~~g~~i~~~g-~~~~~~y~I~~G~v~v~~~~~-~--~~~~l~~g~~f 196 (246)
T 3of1_A 148 LDTKIYQPGETIIREG-DQGENFYLIEYGAVDVSKKGQ-G--VINKLKDHDYF 196 (246)
T ss_dssp CEEEEECTTCEEECTT-SBCCEEEEEEECEEEEEETTT-E--EEEEEETTCEE
T ss_pred hheEEeCCCCEEEeCC-CcCCEEEEEEecEEEEEEcCC-c--eEEEcCCCCcc
Confidence 3455677777642222 235889999999998865432 2 46789999976
No 242
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=47.88 E-value=41 Score=26.54 Aligned_cols=48 Identities=17% Similarity=0.277 Sum_probs=33.9
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMF 135 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 135 (206)
+....+++|...-..-. ..+.+.+|++|++.+.. +|+ ....+.+||.+
T Consensus 62 ~~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~---~g~-~~~~l~~G~~f 109 (291)
T 2qcs_B 62 MFPVSFIAGETVIQQGD-EGDNFYVIDQGEMDVYV---NNE-WATSVGEGGSF 109 (291)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEECCEEEEE---TTE-EEEEECTTCEE
T ss_pred ccEEEECCCCEEEeCCC-CCceEEEEeeeEEEEEE---CCe-EEEEcCCCCcc
Confidence 35566778876533222 34889999999999875 343 36789999986
No 243
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=41.46 E-value=51 Score=31.70 Aligned_cols=53 Identities=21% Similarity=0.218 Sum_probs=38.3
Q ss_pred EEEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCC---cEEEEEEcCCCEE
Q 041665 82 STAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTN---KLYTQTLQIGDMF 135 (206)
Q Consensus 82 ~~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~---~~~~~~L~~GD~~ 135 (206)
.+....+++|..+----.+ ++.+++|++|++.+.+.++++ ......+.+||.|
T Consensus 64 ~m~ye~~~~Ge~IfrqGd~-gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sF 119 (999)
T 4f7z_A 64 CGYYENLEKGITLFRQGDI-GTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAF 119 (999)
T ss_dssp HCEEEEECTTCEEECTTSC-CCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEE
T ss_pred heEEEEECCCCEEEcCCCc-CCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcch
Confidence 5666778888865333344 489999999999998765432 3456789999986
No 244
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=40.29 E-value=45 Score=28.61 Aligned_cols=52 Identities=13% Similarity=0.142 Sum_probs=33.2
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCC------Cc-EEEEEEcCCCEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTT------NK-LYTQTLQIGDMF 135 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~------~~-~~~~~L~~GD~~ 135 (206)
+....+.+|...-.-- ..+..+++|++|++.+.....+ |+ .....+.+||++
T Consensus 290 l~~~~~~~Ge~I~~eG-d~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 290 IGTKVYNDGEQIIAQG-DLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp CEEEEECTTCEEECTT-SCCCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCC-CcCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 4555677777642222 2458899999999998765543 42 346788999976
No 245
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.54 E-value=18 Score=24.58 Aligned_cols=32 Identities=22% Similarity=0.378 Sum_probs=25.9
Q ss_pred echhhhcCCCCHHHHHHHcCCCHHHHHHHHhhc
Q 041665 170 VPTTVFATGIDENILAKAFKTDVTTIQKIKAGL 202 (206)
Q Consensus 170 ~~~~~f~~~~p~~vla~~f~~~~~~v~~l~~~~ 202 (206)
+...+|- .+++|+|..-|+++.-++.|+++-.
T Consensus 45 IDG~lL~-~L~ee~L~edf~ls~Lq~kKi~~fI 76 (84)
T 2dkz_A 45 IDGNLLV-QLTEEILSEDFKLSKLQVKKIMQFI 76 (84)
T ss_dssp CCHHHHH-HCCHHHHHHTSCCCHHHHHHHHHHH
T ss_pred cchHHHH-hCCHHHHHhhcCCCHHHHHHHHHHH
Confidence 3445554 6999999999999999999988654
No 246
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=36.90 E-value=36 Score=27.14 Aligned_cols=49 Identities=12% Similarity=0.068 Sum_probs=33.8
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMFV 136 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~~ 136 (206)
+....+++|...-..-. ....+.+|++|.+++.. +|+ ....+.+||++-
T Consensus 62 ~~~~~~~~g~~i~~~G~-~~~~~yiI~~G~v~v~~---~g~-~~~~~~~G~~fG 110 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGD-VGSLVYVMEDGKVEVTK---EGV-KLCTMGPGKVFG 110 (299)
T ss_dssp CEEEEECTTCEEECTTC-BCCCEEEEEESCEEEEE---TTE-EEEEECTTCEES
T ss_pred cCeEEECCCCEEEcCCC-cCceEEEEEEEEEEEEE---CCE-EEEEeCCCCeee
Confidence 44567788876533323 34889999999999842 343 367899999863
No 247
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=36.24 E-value=1.2e+02 Score=26.12 Aligned_cols=73 Identities=15% Similarity=0.077 Sum_probs=51.4
Q ss_pred EEEEcC---------CCEEEECCCCeEEEEeCCCCccEEEEEEecCCCcc-----eeeec--------------------
Q 041665 126 TQTLQI---------GDMFVFPKGLVHYQYNSKANQPAAAISAFGSASAG-----TVSVP-------------------- 171 (206)
Q Consensus 126 ~~~L~~---------GD~~~~P~g~~H~~~N~g~~~~a~~i~~~~s~~pg-----~~~~~-------------------- 171 (206)
..++++ ||.++-|+-.+|...-.++. +|.+++--...+-. ...++
T Consensus 156 wr~l~~~~~~~~w~~gdsyveps~cphty~l~~d~-parivsyt~~s~l~~l~~e~n~w~~~a~e~~l~~l~~~~aagv~ 234 (443)
T 3g7d_A 156 WRVLHANHGGDRWITGDSYVEPSYCPHSYSLAGDA-PARIVSYTAQSNISPLMTEANNWSTGAFEEALKALSGKVSAGSV 234 (443)
T ss_dssp EEEECBCCSSCTTSCBCEEEECTTCCCEEEESSSS-CEEEEEEECCCTTHHHHHHHTTSCHHHHHHHHHHHSSCCCHHHH
T ss_pred heeeccCCCCCccccCCcccccccCCcccccccCC-chheEeeccccchHHHHHhhcccccHHHHHHHHhhcccchHHHH
Confidence 566777 99999999999999999999 99988754333311 00111
Q ss_pred --hhhhcCCCCHHHHHHHcCCCHHHHHHHH
Q 041665 172 --TTVFATGIDENILAKAFKTDVTTIQKIK 199 (206)
Q Consensus 172 --~~~f~~~~p~~vla~~f~~~~~~v~~l~ 199 (206)
..+-..+++.+-|++..|++.+.+..+-
T Consensus 235 LR~ar~ReglTQ~~LAe~TGIPq~hISeMe 264 (443)
T 3g7d_A 235 LDLFLARRAHTRTSAAEAAGVPPADLEAAL 264 (443)
T ss_dssp HHHHHHHTTCCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHhCCCHHHHHHHh
Confidence 0111137899999999999988776553
No 248
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=35.36 E-value=48 Score=27.91 Aligned_cols=49 Identities=18% Similarity=0.204 Sum_probs=33.1
Q ss_pred EEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCC--cEEEEEEcCCCEE
Q 041665 86 LQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTN--KLYTQTLQIGDMF 135 (206)
Q Consensus 86 ~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~--~~~~~~L~~GD~~ 135 (206)
..+.+|...-.--. .+..+.+|++|++++.....+| ......+.+||.+
T Consensus 274 ~~~~~ge~I~~eGd-~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 274 VQFEDGEKIVVQGE-PGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCBCSSCBSSCTTS-BCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred ccCCCCCEEEeCCC-cCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 44566665422222 3588999999999998765444 2346789999986
No 249
>2qn4_A RASI, alpha-amylase/subtilisin inhibitor; amylase inhibitor, alpha- amylase inhibitor, protease inhibitor, serine protease inhibitor; 1.80A {Oryza sativa subsp}
Probab=34.55 E-value=11 Score=29.87 Aligned_cols=29 Identities=28% Similarity=0.310 Sum_probs=4.7
Q ss_pred CchhhHHHHHHHHHHHHhhhccCCCCCCc
Q 041665 1 MASTNIFKSLIFLLIITVVTASDPDILTD 29 (206)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~d 29 (206)
|.|-+++.+|+++++.....+++++|+-|
T Consensus 1 ~~~~~~~~fLl~a~~~~~~~~a~~~pVlD 29 (200)
T 2qn4_A 1 MVSLRLPLILLSLLAISFSCSAAPPPVYD 29 (200)
T ss_dssp ----------------------CCCBCBC
T ss_pred CccHHHHHHHHHHHHhccccccCCCceEe
Confidence 77777754444444333333456667766
No 250
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B*
Probab=34.33 E-value=27 Score=19.61 Aligned_cols=21 Identities=5% Similarity=0.218 Sum_probs=17.3
Q ss_pred CCHHHHHHHcCCCHHHHHHHH
Q 041665 179 IDENILAKAFKTDVTTIQKIK 199 (206)
Q Consensus 179 ~p~~vla~~f~~~~~~v~~l~ 199 (206)
++++-..+.|+++.++..+|.
T Consensus 1 Lsd~dF~~vFgmsr~eF~~LP 21 (35)
T 1wy3_A 1 LSDEDFKAVFGMTRSAFANLP 21 (35)
T ss_dssp CCHHHHHHHHSSCHHHHHHSC
T ss_pred CCHHHHHHHHCCCHHHHHHCc
Confidence 467778899999999988774
No 251
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=32.05 E-value=31 Score=19.63 Aligned_cols=22 Identities=9% Similarity=0.107 Sum_probs=18.8
Q ss_pred CCCHHHHHHHcCCCHHHHHHHH
Q 041665 178 GIDENILAKAFKTDVTTIQKIK 199 (206)
Q Consensus 178 ~~p~~vla~~f~~~~~~v~~l~ 199 (206)
.++++-..+.|+++.++..+|.
T Consensus 2 yLsd~dF~~vFgmsr~eF~~LP 23 (37)
T 1und_A 2 YLSEQDFVSVFGITRGQFAALP 23 (37)
T ss_dssp CCCHHHHHHHHSSCHHHHHHSC
T ss_pred CCCHHHHHHHHCcCHHHHHHCh
Confidence 3678889999999999988875
No 252
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=31.36 E-value=7.8 Score=27.00 Aligned_cols=34 Identities=26% Similarity=0.447 Sum_probs=23.4
Q ss_pred CCcEEEEEEeeEEEEEEEeCCCcE-EEE--EEcCCCEE
Q 041665 101 RSAELLFVVSGILEVGFIDTTNKL-YTQ--TLQIGDMF 135 (206)
Q Consensus 101 ~a~E~~yVl~G~~~~~~~~~~~~~-~~~--~L~~GD~~ 135 (206)
....+.+|++|++++. ...+|+. ... .+.+||++
T Consensus 46 ~~~~~y~i~~G~v~~~-~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 46 PVNEMLFIIRGRLESV-TTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp BCSEEEEEEECCCEEE-CCSSCSSSSSCEEECCTTCBS
T ss_pred CCCeEEEEEeeEEEEE-EcCCCcceeeeeeeecCCCEe
Confidence 3478999999999964 4445542 122 78899965
No 253
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=31.13 E-value=1.3e+02 Score=25.61 Aligned_cols=46 Identities=20% Similarity=0.224 Sum_probs=32.3
Q ss_pred EEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEE
Q 041665 86 LQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMF 135 (206)
Q Consensus 86 ~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 135 (206)
..+++|...-..-. .+..+++|++|++.+... ++.....+.+||++
T Consensus 364 ~~~~~g~~i~~~G~-~~~~~yiI~~G~v~v~~~---~~~~~~~l~~G~~f 409 (469)
T 1o7f_A 364 SHAKGGTVLFNQGE-EGTSWYIILKGSVNVVIY---GKGVVCTLHEGDDF 409 (469)
T ss_dssp EECSTTCEEECTTS-CCCEEEEEEESEEEEEET---TTEEEEEEETTCEE
T ss_pred eEecCCCEEEeCCC-cCCeEEEEEEeEEEEEEc---CCeeEEEecCCCEE
Confidence 46778876533223 358899999999998653 23347889999976
No 254
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=27.77 E-value=47 Score=26.66 Aligned_cols=29 Identities=17% Similarity=0.221 Sum_probs=23.9
Q ss_pred cEEEEEEcCCCEEEECCCCeEEEE-eCCCC
Q 041665 123 KLYTQTLQIGDMFVFPKGLVHYQY-NSKAN 151 (206)
Q Consensus 123 ~~~~~~L~~GD~~~~P~g~~H~~~-N~g~~ 151 (206)
..+...+++||++++...++|+-. |.++.
T Consensus 226 ~~v~~~~~aGd~~~f~~~~~H~s~~N~s~~ 255 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGEVVHKSKQNLSDR 255 (291)
T ss_dssp GCEEECBCTTCEEEEETTCEEEECCBCSSS
T ss_pred CeeecccCCCcEEEEcCCceecCCCCCCCC
Confidence 346789999999999999999874 66654
No 255
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=27.39 E-value=67 Score=26.03 Aligned_cols=29 Identities=21% Similarity=0.236 Sum_probs=23.6
Q ss_pred cEEEEEEcCCCEEEECCCCeEEE-EeCCCC
Q 041665 123 KLYTQTLQIGDMFVFPKGLVHYQ-YNSKAN 151 (206)
Q Consensus 123 ~~~~~~L~~GD~~~~P~g~~H~~-~N~g~~ 151 (206)
..+...+++||++++...++|+- .|.++.
T Consensus 214 ~~v~~~~~aGd~vlf~~~~~H~s~~N~s~~ 243 (308)
T 2a1x_A 214 ARVHLVMEKGDTVFFHPLLIHGSGQNKTQG 243 (308)
T ss_dssp CCEEECBCTTCEEEECTTCCEEECCBCSSS
T ss_pred CeEEccCCCccEEEECCCccccCCCCCCCC
Confidence 34578899999999999999987 455554
No 256
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=26.00 E-value=42 Score=28.31 Aligned_cols=48 Identities=15% Similarity=0.202 Sum_probs=34.7
Q ss_pred EEEEEecCCCcCCCccCCCCcEEEEEEeeEEEEEEEeCCCcEEEEEEcCCCEE
Q 041665 83 TAILQFPAGAINPPHTHPRSAELLFVVSGILEVGFIDTTNKLYTQTLQIGDMF 135 (206)
Q Consensus 83 ~~~~~l~pg~~~~~H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~L~~GD~~ 135 (206)
+....+++|...-..-.+ +..+++|++|++.+.. +|+ ....+.+||++
T Consensus 153 ~~~~~~~~ge~I~~~Gd~-~~~~yiI~~G~v~v~~---~~~-~v~~l~~G~~f 200 (381)
T 4din_B 153 MFPVTHIAGETVIQQGNE-GDNFYVVDQGEVDVYV---NGE-WVTNISEGGSF 200 (381)
T ss_dssp CEEEECCTTCBSSCTTSB-CCEEEECSSSEEEEEE---TTE-EEEEEESSCCB
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEeeEEEEEE---CCe-EeeeCCCCCEE
Confidence 566778888876443333 4889999999999875 344 35679999975
No 257
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=25.63 E-value=66 Score=27.33 Aligned_cols=22 Identities=27% Similarity=0.478 Sum_probs=20.1
Q ss_pred EEEEEcCCCEEEECCCCeEEEE
Q 041665 125 YTQTLQIGDMFVFPKGLVHYQY 146 (206)
Q Consensus 125 ~~~~L~~GD~~~~P~g~~H~~~ 146 (206)
....+++||+++|...++|.-.
T Consensus 234 ~ewd~epGDav~F~~~tlHga~ 255 (344)
T 3nnf_A 234 EEDEYNLGDAFFFNKYVLHQSV 255 (344)
T ss_dssp EECCBCTTCEEEEETTCEEEEC
T ss_pred ccccCCCCcEEEEecceeecCC
Confidence 3677899999999999999998
No 258
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=25.30 E-value=77 Score=17.17 Aligned_cols=28 Identities=4% Similarity=0.008 Sum_probs=23.4
Q ss_pred cCCCCHHHHHHHcCCCHHHHHHHHhhcC
Q 041665 176 ATGIDENILAKAFKTDVTTIQKIKAGLA 203 (206)
Q Consensus 176 ~~~~p~~vla~~f~~~~~~v~~l~~~~~ 203 (206)
..+++..-+|+.++++...|.+..+.+.
T Consensus 19 ~~g~s~~~IA~~lgis~~Tv~~~~~~~~ 46 (51)
T 1tc3_C 19 LLNVSLHEMSRKISRSRHCIRVYLKDPV 46 (51)
T ss_dssp HTTCCHHHHHHHHTCCHHHHHHHHHCST
T ss_pred HcCCCHHHHHHHHCcCHHHHHHHHhhHH
Confidence 3478889999999999999998877654
No 259
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=24.47 E-value=74 Score=25.79 Aligned_cols=26 Identities=19% Similarity=0.315 Sum_probs=22.2
Q ss_pred cEEEEEEcCCCEEEECCCCeEEE-EeC
Q 041665 123 KLYTQTLQIGDMFVFPKGLVHYQ-YNS 148 (206)
Q Consensus 123 ~~~~~~L~~GD~~~~P~g~~H~~-~N~ 148 (206)
..+...+++||++++...++|.- .|.
T Consensus 218 ~~v~~~~~aGd~v~f~~~l~H~s~~N~ 244 (313)
T 2fct_A 218 SAVPMQMKAGQFIIFWSTLMHASYPHS 244 (313)
T ss_dssp GCEEECBCTTEEEEEETTSEEEECCBC
T ss_pred ceeEeeeCCceEEEEeCCceeeCCCCC
Confidence 34678999999999999999987 566
Done!