Your job contains 1 sequence.
>041667
MSSGFPGGGGGGPDLYSGLAAGGRSITMNGNQLSHQPSYRSSQLPGIFMDQMTSSPQIAN
RNLIGKRTFNDYQITHHHHQQQQQLFQQNHINPAMNSLFLRSVKPRTYQNLSPISPLDFS
PNNINNNNNNVLSPDLQQSLPLSHRYNLPLLQQQLQQQQQPRLYQQHQQQQHVALVSNTI
PYVDNNNTVPSYNNRVQVQGQESEKKMLNRLQELEKQLLDDEEEGDDVSVITNTNSEWSE
TIQNLITFSPKQTVSSIRPLAPSPTTSSSSCSSSSVASPATSCSKQTVIEAATAVSEGKY
DVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVAELFGKEHAESTQLL
YDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARL
NGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGC
EPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMAR
VNEACAYYGALFDSIESTVLRDHSDRVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRA
RMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVKEENGGICFGWMGRTLTVVSAWR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041667
(659 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 1249 5.1e-138 2
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 691 4.4e-68 1
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 654 3.7e-64 1
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 617 3.1e-60 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 597 4.0e-58 1
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 450 1.5e-42 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 440 1.7e-41 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 408 4.3e-38 1
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 395 1.2e-35 2
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 389 1.7e-34 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 375 2.8e-34 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 380 2.4e-33 1
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 374 5.0e-33 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 253 2.4e-31 2
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 355 3.3e-30 1
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 352 4.7e-30 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 350 3.0e-29 2
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 336 9.5e-28 1
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 335 5.4e-27 2
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 278 3.3e-25 2
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 310 4.2e-25 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 303 1.3e-24 2
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 280 2.3e-22 1
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 274 1.2e-21 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 257 7.3e-19 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 244 1.0e-17 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 242 2.0e-17 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 233 1.3e-16 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 226 1.1e-15 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 220 6.8e-15 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 215 1.6e-14 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 182 3.4e-13 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 203 6.3e-13 1
UNIPROTKB|Q1AHE4 - symbol:SCL "SCARECROW-like protein" sp... 124 6.0e-07 1
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 1249 (444.7 bits), Expect = 5.1e-138, Sum P(2) = 5.1e-138
Identities = 260/445 (58%), Positives = 317/445 (71%)
Query: 228 VSVITNTNSEWSETIQNLITFSPKQT-VSSIRPLXXXXXXXXXXXXXXXXXXXXXXXXKQ 286
VSVITN+NS+W IQNL+T +P V S P +Q
Sbjct: 216 VSVITNSNSDW---IQNLVTPNPNPNPVLSFSP-----SSSSSSSSPSTASTTTSVCSRQ 267
Query: 287 TVIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVA 346
TV+E ATA++EGK ++A+EIL R+SQ N + NSE++L++ M +AL+SR+ PV
Sbjct: 268 TVMEIATAIAEGKTEIATEILARVSQTPNLERNSEEKLVDFMVAALRSRI-----ASPVT 322
Query: 347 ELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQG 406
EL+GKEH STQLLY+ SPCF LGF AANLAIL+A G I HVIDFDIG+G
Sbjct: 323 ELYGKEHLISTQLLYELSPCFKLGFEAANLAILDAADNNDGGMMIP----HVIDFDIGEG 378
Query: 407 GQYMNLFHALSARLNGKPA-----IVKVTAVADGT-------ASEEKLKAVRDKLSQVAE 454
GQY+NL LS R NGK +VK+TAVA+ EE+LKAV D LSQ+ +
Sbjct: 379 GQYVNLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVGDLLSQLGD 438
Query: 455 RVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRR 514
R+G+ + FNV L+ DL+R+SLGC+PDETLAVN AFKL+R+PDESV TENPRDELLRR
Sbjct: 439 RLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPDESVCTENPRDELLRR 498
Query: 515 VKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGLS 574
VKGL P VVTLVEQE N+NTAPF+ RV+E+CA YGAL +S+ESTV +SDR KVEEG+
Sbjct: 499 VKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVESTVPSTNSDRAKVEEGIG 558
Query: 575 RKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGF 634
RKL N+VACEG DR+ERCEVFGKWR RM MAGFEL P+S+ IAESM++R GNRV+PGF
Sbjct: 559 RKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAESMKSR---GNRVHPGF 615
Query: 635 TVKEENGGICFGWMGRTLTVVSAWR 659
TVKE+NGG+CFGWMGR LTV SAWR
Sbjct: 616 TVKEDNGGVCFGWMGRALTVASAWR 640
Score = 123 (48.4 bits), Expect = 5.1e-138, Sum P(2) = 5.1e-138
Identities = 39/111 (35%), Positives = 52/111 (46%)
Query: 14 DLYSGLAAGGRSI------TMNGNQLSHQPSYRSSQLPGIFMDQMTSSPQIANRN-LIGK 66
D Y G GGRSI +N + Q +YR+ Q+PGIF DQ+ + ++A N GK
Sbjct: 13 DFYGG--GGGRSIPGGPGTVINVGNNNPQTTYRN-QIPGIFFDQIGN--RVAGGNGFSGK 67
Query: 67 RTFNDYXXXXXXXXXXXXXXXXXXINPAMNSLFLRSVKPRTYQNLSPISPL 117
RT D+ A+N+ RSVKPR YQN SP+
Sbjct: 68 RTLADFQAAQQHQQQQQQQPFYS--QAALNAFLSRSVKPRNYQNFQSPSPM 116
Score = 38 (18.4 bits), Expect = 4.8e-129, Sum P(2) = 4.8e-129
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 179 TIPYVDNNNTVPSYNNRV 196
T+ V NNN +Y N++
Sbjct: 29 TVINVGNNNPQTTYRNQI 46
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 159/383 (41%), Positives = 226/383 (59%)
Query: 285 KQTVIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHEN--- 341
KQ +I A A+SEGK + A ++ L Q + +G+ QR+ +M L +R+
Sbjct: 223 KQILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIY 282
Query: 342 -PPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVID 400
E E + Q+L++ PCF GF+AAN AILEA G ++H+ID
Sbjct: 283 RALKCKEPPSDERLAAMQVLFEVCPCFKFGFLAANGAILEAIK--------GEEEVHIID 334
Query: 401 FDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRD---KLSQVAERVG 457
FDI QG QYM L ++ A L GK +++T + D + + + +R +L Q+AE G
Sbjct: 335 FDINQGNQYMTLIRSI-AELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDNG 393
Query: 458 VCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKG 517
V +F A+ K +S +LGC+P ETL VNFAF+L MPDESV+T N RDELL VK
Sbjct: 394 VSFKFK-AMPSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKS 452
Query: 518 LSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVE-EGLSRK 576
L+P +VT+VEQ+ NTNT+PF R EA YY A+F+S++ T+ R+ +R+ VE + L+R
Sbjct: 453 LNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARD 512
Query: 577 LANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTV 636
+ N VACEG +R+ER E GKWRARM MAGF KPMS + +++ + N + +
Sbjct: 513 IVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQ-QYCNK-YKL 570
Query: 637 KEENGGICFGWMGRTLTVVSAWR 659
KEE G + F W ++L V SAWR
Sbjct: 571 KEEMGELHFCWEEKSLIVASAWR 593
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 154/386 (39%), Positives = 225/386 (58%)
Query: 288 VIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRL----MEHMCSALKSRVNP----- 338
++ A A+SE +A ++ +L Q + G QRL +E + + L S +
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKAL 182
Query: 339 HENPPPVA-ELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIH 397
+ P P + EL H +LY+ P F G+M+AN AI EA E+ N++H
Sbjct: 183 NRCPEPASTELLSYMH-----ILYEVCPYFKFGYMSANGAIAEAMKEE--------NRVH 229
Query: 398 VIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEK---LKAVRDKLSQVAE 454
+IDF IGQG Q++ L A +AR G P I ++T + D T++ + L V ++L+++A+
Sbjct: 230 IIDFQIGQGSQWVTLIQAFAARPGGPPRI-RITGIDDMTSAYARGGGLSIVGNRLAKLAK 288
Query: 455 RVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRR 514
+ V FN ++ + ++ +LG P E LAVNFAF L MPDESVSTEN RD LLR
Sbjct: 289 QFNVPFEFN-SVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRM 347
Query: 515 VKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEG-L 573
VK LSP VVTLVEQE+NTNTA F R E YY A+F+SI+ T+ RDH R+ VE+ L
Sbjct: 348 VKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCL 407
Query: 574 SRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPG 633
+R + N +ACEG DRVER E+ GKWR+R MAGF P+S ++ ++++ L + +
Sbjct: 408 ARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRN---YSDK 464
Query: 634 FTVKEENGGICFGWMGRTLTVVSAWR 659
+ ++E +G + GWM R L AW+
Sbjct: 465 YRLEERDGALYLGWMHRDLVASCAWK 490
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 145/382 (37%), Positives = 217/382 (56%)
Query: 285 KQTVIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPP 344
K ++ A AVSE +A + L + G QRL +M L +R+ +
Sbjct: 51 KLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSS-- 108
Query: 345 VAELFGKEHAESTQ------LLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHV 398
+ + ES + +L++ P F G+M+AN AI EA ++ +IH+
Sbjct: 109 IYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDE--------ERIHI 160
Query: 399 IDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGV 458
IDF IGQG Q++ L A +AR G P I ++T V DG+ L V+ +L ++A++ V
Sbjct: 161 IDFQIGQGSQWIALIQAFAARPGGAPNI-RITGVGDGSV----LVTVKKRLEKLAKKFDV 215
Query: 459 CLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGL 518
RFN A+ ++ ++L E L VNFA+ L +PDESVS EN RD LLR VK L
Sbjct: 216 PFRFN-AVSRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSL 274
Query: 519 SPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEG-LSRKL 577
SP VVTLVEQE NTNT+PF+ R E +YY A+F+SI+ + R+H +R+ +E+ ++R +
Sbjct: 275 SPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDV 334
Query: 578 ANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVK 637
N +ACEG +R+ER E+ GKW++R MAGFE P+S II+ ++R L + G+ ++
Sbjct: 335 VNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSN---GYAIE 391
Query: 638 EENGGICFGWMGRTLTVVSAWR 659
E +G + GWM R L AW+
Sbjct: 392 ERDGALYLGWMDRILVSSCAWK 413
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 146/384 (38%), Positives = 214/384 (55%)
Query: 285 KQTVIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPP 344
K + E A AV ++ ++++L Q + G QRL +M L +R+ +
Sbjct: 228 KGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIY 287
Query: 345 VA----ELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVID 400
A + G E +LY+ P F G+ +AN AI EA ++ +H+ID
Sbjct: 288 KALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESF--------VHIID 339
Query: 401 FDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEK---LKAVRDKLSQVAERVG 457
F I QGGQ+++L AL AR G P V++T + D +S + L+ V +L ++AE G
Sbjct: 340 FQISQGGQWVSLIRALGARPGGPPN-VRITGIDDPRSSFARQGGLELVGQRLGKLAEMCG 398
Query: 458 VCLRFN-VAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVK 516
V F+ A+C ++ + LG E LAVNF L MPDESV+ EN RD LLR VK
Sbjct: 399 VPFEFHGAALCCT--EVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVK 456
Query: 517 GLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEG-LSR 575
LSP+VVTLVEQE NTNTAPF+ R E +Y A+F+SI+ + RDH +R+ VE+ L+R
Sbjct: 457 HLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAR 516
Query: 576 KLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFT 635
++ N +ACEG +R ER E GKWR+R MAGF+ P+S + +++ L S + +T
Sbjct: 517 EVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLES---YSEKYT 573
Query: 636 VKEENGGICFGWMGRTLTVVSAWR 659
++E +G + GW + L AWR
Sbjct: 574 LEERDGALYLGWKNQPLITSCAWR 597
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 122/376 (32%), Positives = 182/376 (48%)
Query: 288 VIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRV-NPHENPPPVA 346
++ A A+ + ++A ++ R+ S+ + ++ + AL R+ + V
Sbjct: 184 LVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRIYRDYTAETDVC 243
Query: 347 ELFGKEHAESTQL-LYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQ 405
E ++ Y+ P AN AILEA TT + ++HVID + Q
Sbjct: 244 AAVNPSFEEVLEMHFYESCPYLKFAHFTANQAILEAV---TT-----ARRVHVIDLGLNQ 295
Query: 406 GGQYMNLFHALSARLNGKPAIVKVTAVADG-TASEEKLKAVRDKLSQVAERVGVCLRFNV 464
G Q+ L AL+ R G P+ ++T + T + + L+ + KL+Q A+ +GV F
Sbjct: 296 GMQWPALMQALALRPGGPPSF-RLTGIGPPQTENSDSLQQLGWKLAQFAQNMGVEFEFKG 354
Query: 465 AICLKFDDLSRDSLGCEPD-ETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVV 523
DL + P+ ETL VN F+L R+ S S E +LL VK + PS+V
Sbjct: 355 LAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGSIE----KLLNTVKAIKPSIV 410
Query: 524 TLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGLSRKLANSVAC 583
T+VEQE N N F+ R NEA YY +LFDS+E + DRV E L R++ N VA
Sbjct: 411 TVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVYLGRQILNVVAA 470
Query: 584 EGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVKEENGGI 643
EG DRVER E +WR RM+ AGF+ + A + L S G+ V+E +G +
Sbjct: 471 EGSDRVERHETAAQWRIRMKSAGFDPIHLGSS-AFKQASMLLSLYATGDGYRVEENDGCL 529
Query: 644 CFGWMGRTLTVVSAWR 659
GW R L SAW+
Sbjct: 530 MIGWQTRPLITTSAWK 545
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 126/378 (33%), Positives = 186/378 (49%)
Query: 286 QTVIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPPV 345
Q ++ A AV +A ++ R+ S+ + ++ + AL R+ + P
Sbjct: 159 QALVACAEAVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRI--YRIHPSA 216
Query: 346 AELFGKEHAESTQL-LYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIG 404
A + E Q+ YD P AN AILEA TT S +HVID +
Sbjct: 217 AAI-DPSFEEILQMNFYDSCPYLKFAHFTANQAILEAV---TT-----SRVVHVIDLGLN 267
Query: 405 QGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNV 464
QG Q+ L AL+ R G P+ ++T V + ++ E ++ + KL+Q+A+ +GV +FN
Sbjct: 268 QGMQWPALMQALALRPGGPPSF-RLTGVGN-PSNREGIQELGWKLAQLAQAIGVEFKFNG 325
Query: 465 AICLKFDDLSRDSLGCEPD-ETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVV 523
+ DL D + ETL VN F+L + + S E +LL VK + P +V
Sbjct: 326 LTTERLSDLEPDMFETRTESETLVVNSVFELHPVLSQPGSIE----KLLATVKAVKPGLV 381
Query: 524 TLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGLSRKLANSVAC 583
T+VEQE N N F+ R NEA YY +LFDS+E V+ DRV E L R++ N VA
Sbjct: 382 TVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEVYLGRQILNLVAT 441
Query: 584 EGRDRVERCEVFGKWRARMRMAGFELKPM-SQIIAE-SMRTRLSSGNRVNPGFTVKEENG 641
EG DR+ER E +WR RM AGF+ + S + S+ LS G G+ V+E +G
Sbjct: 442 EGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGG---DGYRVEENDG 498
Query: 642 GICFGWMGRTLTVVSAWR 659
+ W + L SAW+
Sbjct: 499 SLMLAWQTKPLIAASAWK 516
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 118/371 (31%), Positives = 184/371 (49%)
Query: 295 VSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVAELFGKEHA 354
+S+ + AS+ L ++ ++ + G+ +R+ + AL +R++P+ + ++
Sbjct: 227 ISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLSPNSPATSSSSSSTEDLI 286
Query: 355 ESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFH 414
S + L D P + AN AILEAT + SNKIH++DF I QG Q+ L
Sbjct: 287 LSYKTLNDACPYSKFAHLTANQAILEATEK--------SNKIHIVDFGIVQGIQWPALLQ 338
Query: 415 ALSARLNGKPAIVKVTAVAD---GTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFD 471
AL+ R +GKP ++V+ + G + E L A ++L A+ + + F + I
Sbjct: 339 ALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDF-IPILTPIH 397
Query: 472 DLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETN 531
L+ S +PDE LAVNF +L+++ DE T D LR K L+P VVTL E E +
Sbjct: 398 LLNGSSFRVDPDEVLAVNFMLQLYKLLDE---TPTIVDTALRLAKSLNPRVVTLGEYEVS 454
Query: 532 TNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGL-SRKLANSVACE--GRDR 588
N F RV A +Y A+F+S+E + RD +RV+VE L R+++ + E G R
Sbjct: 455 LNRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGPEKTGIHR 514
Query: 589 VERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVKEENGGICFGWM 648
ER E +WR M AGFE +S + L + N N V+ + G I W
Sbjct: 515 -ERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVESKPGFISLAWN 573
Query: 649 GRTLTVVSAWR 659
L +S+WR
Sbjct: 574 DLPLLTLSSWR 584
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 395 (144.1 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 104/377 (27%), Positives = 187/377 (49%)
Query: 288 VIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVAE 347
++ A AVS A+E+L ++ + ++ GN +RL + ++L++R+ +
Sbjct: 397 LVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAG--TGTQIYT 454
Query: 348 LFGKEHAESTQLLYDFSPCFSL-GFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQG 406
+ + +L + S+ F A + +M + T N +N IH+IDF I G
Sbjct: 455 ALSSKKTSAADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTAN---ANTIHIIDFGISYG 511
Query: 407 GQYMNLFHALS-ARLNGKPAIVKVTAVA---DGTASEEKLKAVRDKLSQVAERVGVCLRF 462
Q+ L H LS +R G P + ++T + G E ++ +L++ +R V +
Sbjct: 512 FQWPALIHRLSLSRPGGSPKL-RITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEY 570
Query: 463 NVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSV 522
N AI K++ + + L E + VN F+ + DE+V +PRD +L+ ++ ++P+V
Sbjct: 571 N-AIAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKINPNV 629
Query: 523 VTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVE-EGLSRKLANSV 581
N N F+ R EA +Y A+FD +S + R+ R+ E E R++ N V
Sbjct: 630 FIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVV 689
Query: 582 ACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVKEENG 641
ACEG +RVER E + +W+AR+ AGF P+ + + ++++ ++ +G N F V +
Sbjct: 690 ACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKN--FDVDQNGN 747
Query: 642 GICFGWMGRTLTVVSAW 658
+ GW GR + S W
Sbjct: 748 WLLQGWKGRIVYASSLW 764
Score = 39 (18.8 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 33 LSHQPSYRSSQLPGIFMDQMTS 54
L ++PS+ + +P F+ Q TS
Sbjct: 177 LENRPSWLHTPMPSNFVFQSTS 198
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 389 (142.0 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 106/387 (27%), Positives = 189/387 (48%)
Query: 285 KQTVIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPP 344
+ + + A AV+ A++ L + ++S G+ QRL + AL++R+ + +PP
Sbjct: 225 RSLLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNISPP- 283
Query: 345 VAELFGKEHAESTQLLYDFS------PCFSLGFMAANLAILEATMEQTTGNTIGSNKIHV 398
V+ F +L + P + + AAN +I E M+ T K+H+
Sbjct: 284 VSNPFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELAMKAT--------KLHI 335
Query: 399 IDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVA---DGTASEEKLKAVRDKLSQVAER 455
+DF + G Q+ L ALS R G P +++VT + G ++++ +L + ++
Sbjct: 336 VDFGVLYGFQWPCLLRALSKRPGGPP-MLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQ 394
Query: 456 VGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRV 515
V FN I K++ ++ D L P ET VN +L PDE+VS ++PRD +L+
Sbjct: 395 FNVPFEFNF-IAKKWETITLDELMINPGETTVVNCIHRLQYTPDETVSLDSPRDTVLKLF 453
Query: 516 KGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRD--HSDRVKVE-EG 572
+ ++P + E N+ FM R EA +Y +LFD ++T+ + + +R +E E
Sbjct: 454 RDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLEREL 513
Query: 573 LSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNP 632
L R + ++CEG +R R E + +WR R+ AGF+ +S+ I + + + R +
Sbjct: 514 LVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRK--RYHR 571
Query: 633 GFTVKEENGGICFGWMGRTLTVVSAWR 659
F + +N + GW GR + S W+
Sbjct: 572 DFVIDSDNNWMLQGWKGRVIYAFSCWK 598
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 375 (137.1 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 107/312 (34%), Positives = 150/312 (48%)
Query: 354 AESTQL-LYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNL 412
+++ Q+ Y+ P AN AILE + K+HVID + G Q+ L
Sbjct: 219 SDTLQIHFYESCPYLKFAHFTANQAILEVFAT--------AEKVHVIDLGLNHGLQWPAL 270
Query: 413 FHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDD 472
AL+ R NG P ++T + S ++ V KL Q+A +GV F D
Sbjct: 271 IQALALRPNGPPDF-RLTGIG---YSLTDIQEVGWKLGQLASTIGVNFEFKSIALNNLSD 326
Query: 473 LSRDSLGCEPD-ETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETN 531
L + L P E++AVN F+L R+ ++ D+ L +K + P ++T+VEQE N
Sbjct: 327 LKPEMLDIRPGLESVAVNSVFELHRL----LAHPGSIDKFLSTIKSIRPDIMTVVEQEAN 382
Query: 532 TNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGLSRKLANSVACEGRDRVER 591
N F+ R E+ YY +LFDS+E DRV E L R++ N VACEG DRVER
Sbjct: 383 HNGTVFLDRFTESLHYYSSLFDSLEGP---PSQDRVMSELFLGRQILNLVACEGEDRVER 439
Query: 592 CEVFGKWRARMRMAGFELKPMS----QIIAESMRTRLSSGNRVNPGFTVKEENGGICFGW 647
E +WR R + GF KP+S SM L +G G+ V+E G + GW
Sbjct: 440 HETLNQWRNRFGLGGF--KPVSIGSNAYKQASMLLALYAGA---DGYNVEENEGCLLLGW 494
Query: 648 MGRTLTVVSAWR 659
R L SAWR
Sbjct: 495 QTRPLIATSAWR 506
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 380 (138.8 bits), Expect = 2.4e-33, P = 2.4e-33
Identities = 112/378 (29%), Positives = 176/378 (46%)
Query: 288 VIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVAE 347
++ A A+ + +A ++ ++ S+ + +++ + AL R+ + PP +
Sbjct: 225 LMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRI--YRLSPPQNQ 282
Query: 348 LFGKEHAESTQL---LYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIG 404
+ +H S L Y+ P AN AILEA E G ++HVIDF +
Sbjct: 283 I---DHCLSDTLQMHFYETCPYLKFAHFTANQAILEA-FE-------GKKRVHVIDFSMN 331
Query: 405 QGGQYMNLFHALSARLNGKPAIVKVTAVADGTA-SEEKLKAVRDKLSQVAERVGVCLRFN 463
QG Q+ L AL+ R G P ++T + + + L V KL+Q+AE + V +
Sbjct: 332 QGLQWPALMQALALREGGPPTF-RLTGIGPPAPDNSDHLHEVGCKLAQLAEAIHVEFEYR 390
Query: 464 VAICLKFDDLSRDSLGCEPDET--LAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPS 521
+ DL L P +T +AVN F+L ++ E ++L VK + P
Sbjct: 391 GFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRPGGIE----KVLGVVKQIKPV 446
Query: 522 VVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGLSRKLANSV 581
+ T+VEQE+N N F+ R E+ YY LFDS+E + + D+V E L +++ N V
Sbjct: 447 IFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEG--VPNSQDKVMSEVYLGKQICNLV 504
Query: 582 ACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVKEENG 641
ACEG DRVER E +W R +G + + LS N G+ V+E NG
Sbjct: 505 ACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNS-GQGYRVEESNG 563
Query: 642 GICFGWMGRTLTVVSAWR 659
+ GW R L SAW+
Sbjct: 564 CLMLGWHTRPLITTSAWK 581
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 374 (136.7 bits), Expect = 5.0e-33, P = 5.0e-33
Identities = 113/380 (29%), Positives = 179/380 (47%)
Query: 288 VIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVAE 347
++ A AV + VA ++ ++ S+ + +++ + AL R+ + P +
Sbjct: 173 LLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEALARRI--YRLSPSQSP 230
Query: 348 LFGKEHAESTQL---LYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIG 404
+ +H+ S L Y+ P AN AILEA G ++HVIDF +
Sbjct: 231 I---DHSLSDTLQMHFYETCPYLKFAHFTANQAILEAFQ--------GKKRVHVIDFSMS 279
Query: 405 QGGQYMNLFHALSARLNGKPAIVKVTAVADGTASE-EKLKAVRDKLSQVAERVGVCLRFN 463
QG Q+ L AL+ R G P + ++T + + L V KL+ +AE + V +
Sbjct: 280 QGLQWPALMQALALRPGGPP-VFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAIHVEFEYR 338
Query: 464 VAICLKFDDLSRDSLGCEPDE--TLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPS 521
+ DL L P E ++AVN F+L ++ + D++L V + P
Sbjct: 339 GFVANTLADLDASMLELRPSEIESVAVNSVFELHKL----LGRPGAIDKVLGVVNQIKPE 394
Query: 522 VVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGLSRKLANSV 581
+ T+VEQE+N N+ F+ R E+ YY LFDS+E + D+V E L +++ N V
Sbjct: 395 IFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEG--VPSGQDKVMSEVYLGKQICNVV 452
Query: 582 ACEGRDRVERCEVFGKWRARMRMAGFELKPM-SQIIAE-SMRTRLSSGNRVNPGFTVKEE 639
AC+G DRVER E +WR R AGF + S + SM L +G G+ V+E
Sbjct: 453 ACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGE---GYRVEES 509
Query: 640 NGGICFGWMGRTLTVVSAWR 659
+G + GW R L SAW+
Sbjct: 510 DGCLMLGWHTRPLIATSAWK 529
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 253 (94.1 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 60/152 (39%), Positives = 85/152 (55%)
Query: 509 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVK 568
D L + GLSP V+ + EQ+++ N + M R+ E+ Y ALFD +E+ V R DR+K
Sbjct: 330 DSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIK 389
Query: 569 VEEGL-SRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSG 627
VE+ L ++ N ++CEG +R ER E KW R+ +AGF P+S R RL G
Sbjct: 390 VEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQAR-RLLQG 448
Query: 628 NRVNPGFTVKEENGGICFGWMGRTLTVVSAWR 659
+ G+ +KEE+G W R L VSAWR
Sbjct: 449 CGFD-GYRIKEESGCAVICWQDRPLYSVSAWR 479
Score = 162 (62.1 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 58/228 (25%), Positives = 106/228 (46%)
Query: 288 VIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVN---P--HE-- 340
++ A V+ G A+ L +LS + G++ QR+ + AL +R+ P ++
Sbjct: 58 LLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKAL 117
Query: 341 NPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVID 400
N E +L ++ P + ++ N AILEA ME G +HVID
Sbjct: 118 NATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEA-ME-------GEKMVHVID 169
Query: 401 FDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCL 460
D + Q++ L A ++R G P + ++T V +E L+ + +L + AE++ +
Sbjct: 170 LDASEPAQWLALLQAFNSRPEGPPHL-RITGVHH---QKEVLEQMAHRLIEEAEKLDIPF 225
Query: 461 RFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKL--FRMPDESVSTEN 506
+FN + + D L+ + L + E LAV+ +L F D+ + +N
Sbjct: 226 QFNPVVS-RLDCLNVEQLRVKTGEALAVSSVLQLHTFLASDDDLMRKN 272
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 355 (130.0 bits), Expect = 3.3e-30, P = 3.3e-30
Identities = 106/382 (27%), Positives = 177/382 (46%)
Query: 285 KQTVIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPP 344
+ +++ A AV+ A E L + + ++ G++ QRL H AL++R+ P
Sbjct: 210 RNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDATQRLGYHFAEALEARITGTMTTPI 269
Query: 345 VAELFGKEHAESTQLLYDF---SPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDF 401
A + + F P + + AN I E + TT +H+IDF
Sbjct: 270 SATSSRTSMVDILKAYKGFVQACPTLIMCYFTANRTINELASKATT--------LHIIDF 321
Query: 402 DIGQGGQYMNLFHALSARLNGKPAIVKVTAVA---DGTASEEKLKAVRDKLSQVAERVGV 458
I G Q+ L ALS R G P +++VT + G E+++ +L + ++ V
Sbjct: 322 GILYGFQWPCLIQALSKRDIGPP-LLRVTGIELPQSGFRPSERVEETGRRLKRFCDKFNV 380
Query: 459 CLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGL 518
++ I +++++ D L ET VN +L PDE+VS +PRD L+ + +
Sbjct: 381 PFEYSF-IAKNWENITLDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDI 439
Query: 519 SPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGLSRKLA 578
+P + E N+ F+ R EA + +LFD E+T+ D + R VE L + A
Sbjct: 440 NPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDA 499
Query: 579 NSV-ACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVK 637
SV ACEG +R R E + +W+ R+ AGF +S+ I + + + R + F +
Sbjct: 500 MSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKE--RYHKDFVID 557
Query: 638 EENGGICFGWMGRTLTVVSAWR 659
+N + GW GR L VS W+
Sbjct: 558 NDNHWMFQGWKGRVLYAVSCWK 579
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 352 (129.0 bits), Expect = 4.7e-30, P = 4.7e-30
Identities = 107/371 (28%), Positives = 177/371 (47%)
Query: 299 KYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVAELFGKEHAESTQ 358
K + + L R+ ++ + G+ QR+ + AL + E+P + ++ S +
Sbjct: 187 KPETKPDTLIRIKESVSESGDPIQRVGYYFAEALSHKET--ESPSSSSSSSLEDFILSYK 244
Query: 359 LLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSA 418
L D P + AN AILEAT + SN IH++DF I QG Q+ L AL+
Sbjct: 245 TLNDACPYSKFAHLTANQAILEATNQ--------SNNIHIVDFGIFQGIQWSALLQALAT 296
Query: 419 RLNGKPAIVKVTAVAD---GTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSR 475
R +GKP ++++ + G + L A ++L A + + F + L+
Sbjct: 297 RSSGKPTRIRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEF-YPVLTPIQLLNG 355
Query: 476 DSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTA 535
S +PDE L VNF +L+++ DE+ +T LR + L+P +VTL E E + N
Sbjct: 356 SSFRVDPDEVLVVNFMLELYKLLDETATTVGTA---LRLARSLNPRIVTLGEYEVSLNRV 412
Query: 536 PFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGL-SRKLANSVACEGRD-----RV 589
F RV + +Y A+F+S+E + RD +R++VE L R++ + V + + R
Sbjct: 413 EFANRVKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRF 472
Query: 590 ERCEVFGKWRARMRMAGFE-LKPMSQIIAESMRTRLSSGNRVNPGFTVKEENGGICFGWM 648
E +WR M AGFE +KP + ++++ + L + N V+ E G I W
Sbjct: 473 GLMEEKEQWRVLMEKAGFEPVKPSNYAVSQA-KLLLWNYNYSTLYSLVESEPGFISLAWN 531
Query: 649 GRTLTVVSAWR 659
L VS+WR
Sbjct: 532 NVPLLTVSSWR 542
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 350 (128.3 bits), Expect = 3.0e-29, Sum P(2) = 3.0e-29
Identities = 100/380 (26%), Positives = 176/380 (46%)
Query: 292 ATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENP--PPVAELF 349
A +VS G A ++L ++ + + G++ QRL +AL++R+ +
Sbjct: 323 AQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEARLEGSTGTMIQSYYDSI 382
Query: 350 GKEHAESTQLLYDFS------PCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDI 403
+ + Q+L +S P +L + +N IL+A + + +H++DF I
Sbjct: 383 SSKKRTAAQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASV--------LHIVDFGI 434
Query: 404 GQGGQYMNLFHALSARLNG--KPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLR 461
G Q+ LS G K I + G E+++ +L++ +R GV
Sbjct: 435 LYGFQWPMFIQHLSKSNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFE 494
Query: 462 FNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTEN-PRDELLRRVKGLSP 520
+N ++ + + P+E LAVN + + D E+ PRD L+ ++ ++P
Sbjct: 495 YNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNP 554
Query: 521 SVVTLVEQETNTNTAPFMA-RVNEACAYYGALFDSIESTVLRDHSDRVKVE-EGLSRKLA 578
+V L + APF R EA +Y ALFD +T+ +++ +R+ E E R++
Sbjct: 555 NVF-LSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVM 613
Query: 579 NSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVKE 638
N +ACEG DRVER E + +W+ RM AGF+ KP+ + + R ++ + F + E
Sbjct: 614 NVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWG-YHKDFVLDE 672
Query: 639 ENGGICFGWMGRTLTVVSAW 658
++ GW GR L S W
Sbjct: 673 DSNWFLQGWKGRILFSSSCW 692
Score = 40 (19.1 bits), Expect = 3.0e-29, Sum P(2) = 3.0e-29
Identities = 7/26 (26%), Positives = 17/26 (65%)
Query: 183 VDNNNTVPSYNNRVQVQGQESEKKML 208
+D+ NT+ Y N++ ++ +EK+ +
Sbjct: 63 IDSENTLLKYVNQLLMEESLAEKQSI 88
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 336 (123.3 bits), Expect = 9.5e-28, P = 9.5e-28
Identities = 112/380 (29%), Positives = 187/380 (49%)
Query: 288 VIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRV-NP----HENP 342
+++ A AVS + A+++L +SQ + G S QR+ + A+ +R+ N +
Sbjct: 294 LLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLNSCLGIYAAL 353
Query: 343 PP--VAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVID 400
P + + + + Q+ SP AN AI EA ++ + +H+ID
Sbjct: 354 PSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKE--------DSVHIID 405
Query: 401 FDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCL 460
DI QG Q+ LFH L++R G P V++T + GT S E L+A +LS A+++G+
Sbjct: 406 LDIMQGLQWPGLFHILASRPGGPPH-VRLTGL--GT-SMEALQATGKRLSDFADKLGLPF 461
Query: 461 RFNVAICLKFDDLSRDSLGCEPDETLAVNFA-FKLFRMPDESVSTENPRDELLRRVKGLS 519
F + K +L + L E +AV++ L+ + T LL+R L+
Sbjct: 462 EF-CPLAEKVGNLDTERLNVRKREAVAVHWLQHSLYDVTGSDAHTL----WLLQR---LA 513
Query: 520 PSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGL-SRKLA 578
P VVT+VEQ+ + + F+ R EA YY ALFDS+ ++ + +R VE+ L S+++
Sbjct: 514 PKVVTVVEQDLS-HAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIR 572
Query: 579 NSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVKE 638
N +A G R + F WR +M+ GF K +S + + L G + G+T+ +
Sbjct: 573 NVLAVGGPSRSGEVK-FESWREKMQQCGF--KGISLAGNAATQATLLLGMFPSDGYTLVD 629
Query: 639 ENGGICFGWMGRTLTVVSAW 658
+NG + GW +L SAW
Sbjct: 630 DNGTLKLGWKDLSLLTASAW 649
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 335 (123.0 bits), Expect = 5.4e-27, Sum P(2) = 5.4e-27
Identities = 101/382 (26%), Positives = 174/382 (45%)
Query: 285 KQTVIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPP 344
+ +I A AV+ A ++L ++ + G+ QRL + L++R+
Sbjct: 345 RSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARL-AGTGSQI 403
Query: 345 VAELFGKEHAESTQLLYD--FSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFD 402
+ K + + L F C F + I T+ GN S ++HVIDF
Sbjct: 404 YKGIVSKPRSAAAVLKAHQLFLACCP--FRKLSYFITNKTIRDLVGN---SQRVHVIDFG 458
Query: 403 IGQGGQYMNLFHALSARLNGKPAIVKVTAVA---DGTASEEKLKAVRDKLSQVAERVGVC 459
I G Q+ L H S + G P V++T + G ++++ +L+ A+ GV
Sbjct: 459 ILYGFQWPTLIHRFS--MYGSPK-VRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVP 515
Query: 460 LRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLS 519
+ AI K+D + + L + DE VN ++ + DESV E+ RD +L + ++
Sbjct: 516 FEYK-AIAKKWDAIQLEDLDIDRDEITVVNCLYRAENLHDESVKVESCRDTVLNLIGKIN 574
Query: 520 PSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVE-EGLSRKLA 578
P + N F+ R EA ++ ++FD +E+ V R+ +R+ +E E R+
Sbjct: 575 PDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREAL 634
Query: 579 NSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRV-NPGFTVK 637
N +ACEG +RVER E + +W R +G P I M+T L + + F +
Sbjct: 635 NVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSI---MKTSLHKVHTFYHKDFVID 691
Query: 638 EENGGICFGWMGRTLTVVSAWR 659
++N + GW GRT+ +S W+
Sbjct: 692 QDNRWLLQGWKGRTVMALSVWK 713
Score = 37 (18.1 bits), Expect = 5.4e-27, Sum P(2) = 5.4e-27
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 40 RSSQLPGIFMDQMTSSPQIANRNLI 64
RSS+LP +F + + S + ++ L+
Sbjct: 260 RSSKLPAVFGEDILRS-DVVDKILV 283
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 278 (102.9 bits), Expect = 3.3e-25, Sum P(2) = 3.3e-25
Identities = 86/313 (27%), Positives = 150/313 (47%)
Query: 360 LYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSAR 419
L +P G + AN AIL+AT +T N G+ +H++D DI QG Q+ L AL+ R
Sbjct: 149 LNQLTPFIRFGHLTANQAILDAT--ETNDN--GA--LHILDLDISQGLQWPPLMQALAER 202
Query: 420 LNGK---PAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFD----- 471
+ P +++T L D+L++ A+ +G+ +F+ + ++ D
Sbjct: 203 SSNPSSPPPSLRITGCGRDVTG---LNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLL 259
Query: 472 -DLSRDSLGCEPDETLAVN---FAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVE 527
+ +L ET+AVN F K+F + + L +K L+ +VT+ E
Sbjct: 260 LQIRLLALSAVQGETIAVNCVHFLHKIFNDDGDMIG------HFLSAIKSLNSRIVTMAE 313
Query: 528 QETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEG-LSRKLANSVACEGR 586
+E N F+ R +EA +Y A+FDS+E+T+ + +R+ +E+ +++ + VA E
Sbjct: 314 REANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEET 373
Query: 587 DRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVKEENGGICFG 646
+R +R F W M+ GF P+ A S L + + G+ ++ N + G
Sbjct: 374 ERKQRHRRFEIWEEMMKRFGFVNVPIGSF-ALSQAKLLLRLHYPSEGYNLQFLNNSLFLG 432
Query: 647 WMGRTLTVVSAWR 659
W R L VS+W+
Sbjct: 433 WQNRPLFSVSSWK 445
Score = 71 (30.1 bits), Expect = 3.3e-25, Sum P(2) = 3.3e-25
Identities = 22/85 (25%), Positives = 38/85 (44%)
Query: 285 KQTVIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPP 344
++ + AA VS+ + A +L+ LS ++ G+S +RL+ AL R+N +
Sbjct: 42 RRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRINRQQQDQT 101
Query: 345 ---VAELFGKEHAESTQLLYDFSPC 366
VA E S ++ S C
Sbjct: 102 AETVATWTTNEMTMSNSTVFTSSVC 126
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 310 (114.2 bits), Expect = 4.2e-25, P = 4.2e-25
Identities = 107/395 (27%), Positives = 175/395 (44%)
Query: 288 VIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNP-----HENP 342
++EAA A S+ A +IL L++ ++ G++EQ+L + AL +R+ +
Sbjct: 147 LLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTM 206
Query: 343 PPVA---ELFGKEHAESTQLLY-DFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHV 398
A + E T L + + SP + G +AAN AILEA G KIH+
Sbjct: 207 VTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVD--------GEAKIHI 258
Query: 399 IDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVA------DGTASEEKLKAVRDKLSQV 452
+D Q+ L AL+ R + P + T V D TAS +K + +++ +
Sbjct: 259 VDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKF 318
Query: 453 AERVGVCLRFNVAICL-KFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDEL 511
A +GV +FN+ + + + L +PDE LA+N + + S +PRD +
Sbjct: 319 ARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGI----ASRGSPRDAV 374
Query: 512 LRRVKGLSPSVVTLVEQETNTNTAP-------FMARVNEACAYYGALFDSIESTVLRDHS 564
+ + L P +VT+VE+E + F+ E ++ F+S E + R +
Sbjct: 375 ISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSN 434
Query: 565 DRVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRL 624
+R+ +E R + + VACE D ER E KW RMR +GF S +A+ +R L
Sbjct: 435 ERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALL 494
Query: 625 SSGNRVNPGFTVKEENGGICFGWMGRTLTVVSAWR 659
+ GI W + + SAWR
Sbjct: 495 RRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAWR 529
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 303 (111.7 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 106/377 (28%), Positives = 171/377 (45%)
Query: 304 SEILTRLSQATNSKGNSEQ-RLMEHMCSALKSRVN---PH--ENPPP--VAELFGKEHAE 355
+ + R + +G + RL+ + AL RV PH PP E
Sbjct: 294 NHFIARTGDLASPRGRTPMTRLIAYYIEALALRVARMWPHIFHIAPPREFDRTVEDESGN 353
Query: 356 STQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHA 415
+ + L +P AN +L A E G ++H+IDFDI QG Q+ + F +
Sbjct: 354 ALRFLNQVTPIPKFIHFTANEMLLRA-FE-------GKERVHIIDFDIKQGLQWPSFFQS 405
Query: 416 LSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSR 475
L++R+N P V++T + + S+ +L D+L AE + + F+ + + +D+
Sbjct: 406 LASRIN-PPHHVRITGIGE---SKLELNETGDRLHGFAEAMNLQFEFHPVVD-RLEDVRL 460
Query: 476 DSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTA 535
L + E++AVN ++ + + RD L ++ +P + L EQE N+
Sbjct: 461 WMLHVKEGESVAVNCVMQMHKTLYDGTGAAI-RD-FLGLIRSTNPIALVLAEQEAEHNSE 518
Query: 536 PFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGL-SRKLANSVACEGRDRVERCEV 594
RV + YY A+FD+I + + D RVKVEE L R++ N VACEG R ER
Sbjct: 519 QLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVG 578
Query: 595 FGKWRARMRMAGFELKPMSQ--IIAESMRTRLSSGNRVNPGF-TVK---EENGG------ 642
F WR + GF +S+ ++ M R+ + N GF V+ E+NGG
Sbjct: 579 FRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSD--NEGFFNVERSDEDNGGEGGRGG 636
Query: 643 -ICFGWMGRTLTVVSAW 658
+ W + L +SAW
Sbjct: 637 GVTLRWSEQPLYTISAW 653
Score = 49 (22.3 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 23 GRSITM-NGNQLSHQPSYRSSQLPGIFMDQMTSSPQIA 59
GRSI++ N N +++P R ++ G + Q P +A
Sbjct: 60 GRSISLDNSNNNNNKPIERKTKTSGCSLKQNIKLPPLA 97
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 280 (103.6 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 100/392 (25%), Positives = 173/392 (44%)
Query: 285 KQTVIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRV---NPHEN 341
+Q ++ ATA+ + +IL L+ G+S QRL AL SR P +
Sbjct: 28 EQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLS 87
Query: 342 PP----PVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIH 397
P A+ + D +P GF+AAN AIL A +E G + +H
Sbjct: 88 STISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTA-VE-------GYSTVH 139
Query: 398 VIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKL----KAVRDKLSQVA 453
++D + Q L A+++RLN P ++K+T V+ + + + KL A
Sbjct: 140 IVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFA 199
Query: 454 ERVGVCLRFNVAICLKFDDLSR--DSLGCEP---DETLAVNFAFKLFRMPDESV--STEN 506
+ + F + D S L P +E L VN L +P+E + S+ +
Sbjct: 200 TTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSS 259
Query: 507 PRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 566
R L++++ L+P +VTL+E++ + + + R+ A Y+ FD+ + T + + R
Sbjct: 260 LRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTD-TFMSEQ--R 316
Query: 567 VKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSS 626
E +S K+ N VA EG +RVER E +W RMR A F + + ++ L
Sbjct: 317 RWYEAEISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEE 376
Query: 627 GNRVNPGFTVKEENGGICFGWMGRTLTVVSAW 658
+ V G ++++ + W G ++ + W
Sbjct: 377 -HAVGWGMKKEDDDESLVLTWKGHSVVFATVW 407
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 274 (101.5 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 101/385 (26%), Positives = 183/385 (47%)
Query: 288 VIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRV---------NP 338
+++ A V+ AS +L+ +S+ + G+S +R++ + AL++RV +P
Sbjct: 44 LLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISSYLSGACSP 103
Query: 339 -HENPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIH 397
E P V + ++ + Q SP AN AI +A ++ G + +H
Sbjct: 104 LSEKPLTVVQ--SQKIFSALQTYNSVSPLIKFSHFTANQAIFQA-LD-------GEDSVH 153
Query: 398 VIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVG 457
+ID D+ QG Q+ LFH L++R K +++T +S + L + +L+ A +
Sbjct: 154 IIDLDVMQGLQWPALFHILASRPR-KLRSIRITGFG---SSSDLLASTGRRLADFASSLN 209
Query: 458 VCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFA-FKLFRMPDESVSTENPRDELLRRVK 516
+ F+ + + + L E + V++ +L+ + ++ T E+LRR+K
Sbjct: 210 LPFEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQHRLYDVTGNNLETL----EILRRLK 265
Query: 517 GLSPSVVTLVEQETNTNTA-PFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEE-GLS 574
P+++T+VEQE + + F+ R EA YY ALFD++ + + +R VE+ L
Sbjct: 266 ---PNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLG 322
Query: 575 RKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGF 634
++ N VA G R +R KW+ + GF +P+S + + L G G+
Sbjct: 323 TEIRNIVA-HGGGRRKRM----KWKEELSRVGF--RPVSLRGNPATQAGLLLGMLPWNGY 375
Query: 635 TVKEENGGICFGWMGRTLTVVSAWR 659
T+ EENG + GW +L SAW+
Sbjct: 376 TLVEENGTLRLGWKDLSLLTASAWK 400
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 257 (95.5 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 103/383 (26%), Positives = 174/383 (45%)
Query: 293 TAVSEGKYDVASE-ILTRLSQATNSKGNSE---QRLMEHMCSALKSRVNPHENPPPVAEL 348
T + G + V ++ IL RL+ N+ N + QR H+ AL S ++ +PP +
Sbjct: 282 TGNNNGDHTVLAQGILARLNHHLNTSSNHKSPFQRAASHIAEALLSLIHNESSPPLITPE 341
Query: 349 FGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQ 408
+ + + SP AN +ILE+ E G ++IH+IDFD+G GGQ
Sbjct: 342 NLILRIAAYRSFSETSPFLQFVNFTANQSILESCNES------GFDRIHIIDFDVGYGGQ 395
Query: 409 YMNLFHALSARLNGK----PAIVKVTAVAD--GTASEE-KLKAVRDKLSQVAERVGVCLR 461
+ +L L++ + G+ + +K+T A T S+E +L+ + L A V +
Sbjct: 396 WSSLMQELASGVGGRRRNRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFE 455
Query: 462 FNV-AICLKFDDLSRD-SLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLS 519
+ ++ L + SL E +AVN +P SV++ +LR +K LS
Sbjct: 456 IELLSVELLLNPAYWPLSLRSSEKEAIAVN-------LPVNSVAS-GYLPLILRFLKQLS 507
Query: 520 PSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHS--DRVKVEEGLSRKL 577
P++V ++ + N APF V + Y+ +L +S+++ +D S +R V+ + + L
Sbjct: 508 PNIVVCSDRGCDRNDAPFPNAVIHSLQYHTSLLESLDANQNQDDSSIERFWVQPSIEKLL 567
Query: 578 ANSVACEGRDR-VERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTV 636
R R +ER WR GF +SQ+ AE+ L N V GF V
Sbjct: 568 MK------RHRWIERSP---PWRILFTQCGFSPASLSQM-AEAQAECLLQRNPVR-GFHV 616
Query: 637 KEENGGICFGWMGRTLTVVSAWR 659
++ + W + L VSAW+
Sbjct: 617 EKRQSSLVMCWQRKELVTVSAWK 639
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 244 (91.0 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 97/382 (25%), Positives = 170/382 (44%)
Query: 290 EAATAVSEGKYDVASEILTRLSQATNSKGNSE-QRLMEHMCSALKSRVNPHENPPPVA-- 346
+A+T ++ + ++ IL RL + + +RL H + L + P
Sbjct: 113 DASTGANKSR-ELTRVILARLKDLVSPGDRTNMERLAAHFTNGLSKLLERDSVLCPQQHR 171
Query: 347 -ELFGKEHAEST-QLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIG 404
+++ + S +LL + SP + G++ A AILEA + +IH++D+DI
Sbjct: 172 DDVYDQADVISAFELLQNMSPYVNFGYLTATQAILEAVKYE--------RRIHIVDYDIN 223
Query: 405 QGGQYMNLFHALSARLNGKPAI-VKVTAVADGTASEEKLKAVRD---KLSQVAERVGVCL 460
+G Q+ +L AL +R G A +++TA++ T ++ + AV++ +L+ A+ +G
Sbjct: 224 EGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLTAFADSIGQ-- 281
Query: 461 RFNVAIC-LKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLS 519
F+ C L + S SL E + +N + +P S T + L K L+
Sbjct: 282 PFSYQHCKLDTNAFSTSSLKLVRGEAVVINC---MLHLPRFSHQTPSSVISFLSEAKTLN 338
Query: 520 PSVVTLVEQETNT-NTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEG-LSRKL 577
P +VTLV +E F+ R + + A+FDS+E+ + + R VE + +
Sbjct: 339 PKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFVERVFIGPWV 398
Query: 578 ANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVK 637
AN + + E E F W + GF KP+ + +L + N GF V+
Sbjct: 399 ANWLTRITANDAE-VESFASWPQWLETNGF--KPLEVSFTNRCQAKLLL-SLFNDGFRVE 454
Query: 638 E-ENGGICFGWMGRTLTVVSAW 658
E G+ GW R L S W
Sbjct: 455 ELGQNGLVLGWKSRRLVSASFW 476
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 242 (90.2 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 99/379 (26%), Positives = 162/379 (42%)
Query: 292 ATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVAELFGK 351
A A++ L LS+ +S G++ +RL AL+ ++ +F
Sbjct: 153 ALAITASNSSRVQHYLCVLSELASSSGDANRRLAAFGLRALQHHLSSSSVSSSFWPVFTF 212
Query: 352 EHAE-----STQL-LYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQ 405
AE T L Y+ SP F+L AN AIL+ + +H+ID +
Sbjct: 213 ASAEVKMFQKTLLKFYEVSPWFALPNNMANSAILQILAQDPKDK----KDLHIIDIGVSH 268
Query: 406 GGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVC--LRFN 463
G Q+ L ALS RL G P V++T ++D TA + + ++ +G L+ N
Sbjct: 269 GMQWPTLLEALSCRLEGPPPRVRITVISDLTA-DIPFSVGPPGYNYGSQLLGFARSLKIN 327
Query: 464 VAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVV 523
+ I + D L + P E L V F+L + S++ E R E L+ V+ L P V
Sbjct: 328 LQISV-LDKLQL--IDTSPHENLIVCAQFRLHHLK-HSINDE--RGETLKAVRSLRPKGV 381
Query: 524 TLVEQETN-TNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGLSRKLANSVA 582
L E +++A F A ++ Y DS S ++S+ K+ EG + K V
Sbjct: 382 VLCENNGECSSSADFAAGFSKKLEYVWKFLDSTSSGFKEENSEERKLMEGEATK----VL 437
Query: 583 CEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVKEENGG 642
D E E KW RMR AGF ++ + + ++ L + + + ++ E+G
Sbjct: 438 MNAGDMNEGKE---KWYERMREAGFFVEAFEEDAVDGAKSLL---RKYDNNWEIRMEDGD 491
Query: 643 ICFG--WMGRTLTVVSAWR 659
G W G ++ S W+
Sbjct: 492 TFAGLMWKGEAVSFCSLWK 510
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 233 (87.1 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 104/388 (26%), Positives = 162/388 (41%)
Query: 303 ASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVAELFGKEHAESTQLLYD 362
A+EI+ L+ A + +G++ RL H AL RV+ V G S+
Sbjct: 72 AAEIV--LAAAASPRGDAADRLAYHFARALALRVDAKAGHGHVVVGGGAARPASSGAYLA 129
Query: 363 FS---PCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSAR 419
F+ P + AN AILEA G+ ++H++D D G Q+ L A++ R
Sbjct: 130 FNQIAPFLRFAHLTANQAILEAVD--------GARRVHILDLDAVHGVQWPPLLQAIAER 181
Query: 420 LNGK--PAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAI--CLKF--DDL 473
+ P V+VT A + L ++L A + + F + C +
Sbjct: 182 ADPALGPPEVRVTGAG---ADRDTLLRTGNRLRAFARSIHLPFHFTPLLLSCATTAPHHV 238
Query: 474 SRDSLGC---------------EPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGL 518
+ S G PDETLAVN L +++ + L+ VK +
Sbjct: 239 AGTSTGAAAAASTAAAATGLEFHPDETLAVNCVMFL-----HNLAGHDELAAFLKWVKAM 293
Query: 519 SPSVVTLVEQETN------TNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVE-E 571
SP+VVT+ E+E + RV A +Y A+F+++E+TV +R+ VE E
Sbjct: 294 SPAVVTIAEREAGGGGGGGDHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQE 353
Query: 572 GLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVN 631
L R++ +V G E +W R AGF +P+S R L + +
Sbjct: 354 VLGREIEAAVGPSGGRWWRGIE---RWGGAARAAGFAARPLSAFAVSQARLLLRL-HYPS 409
Query: 632 PGFTVKEENGGICFGWMGRTLTVVSAWR 659
G+ V+E G GW R L VSAW+
Sbjct: 410 EGYLVQEARGACFLGWQTRPLLSVSAWQ 437
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 226 (84.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 106/387 (27%), Positives = 166/387 (42%)
Query: 286 QTVIEAATAVSEGKYDVASEILTRLSQATNSK-GNSEQRLMEHMCSALKSRVNPHENPPP 344
+ +I V + +A +L+RL+Q S G QR + AL S + N P
Sbjct: 124 EDLIRVVDCVESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTG-SNRNP 182
Query: 345 VAELFGKEHAESTQLLYDFS-----PCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVI 399
+ E + + + ++S P FS AN AIL++ Q++ S +HV+
Sbjct: 183 IRLSSWSEIVQRIRAIKEYSGISPIPLFS--HFTANQAILDSLSSQSS-----SPFVHVV 235
Query: 400 DFDIGQGGQYMNLFHALSAR-LNGKPAIVKVTAV-ADGTASEEKLKAVRDKLSQVAERVG 457
DF+IG GGQY +L ++ + ++G ++VTAV A+ A E +L V++ L+Q A +
Sbjct: 236 DFEIGFGGQYASLMREITEKSVSG--GFLRVTAVVAEECAVETRL--VKENLTQFAAEMK 291
Query: 458 VCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKG 517
+ + + F+ LS ++ E V + +FR N LRRV
Sbjct: 292 IRFQIEFVLMKTFEMLSFKAIRFVEGERTVVLISPAIFRRLSGITDFVNN----LRRV-- 345
Query: 518 LSPSVVTLVEQETNTNTA---PFMARVNEACAYYGALFDSIESTVLRDHSDRVK--VEEG 572
SP VV V+ E T A F A +Y + +S+++ D VK VE
Sbjct: 346 -SPKVVVFVDSEGWTEIAGSGSFRREFVSALEFYTMVLESLDAAA--PPGDLVKKIVEAF 402
Query: 573 LSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNP 632
+ R ++ DR E+ WR AG +SQ A+ L +V
Sbjct: 403 VLRPKISAAVETAADRRHTGEM--TWREAFCAAGMRPIQLSQF-ADFQAECLLEKAQVR- 458
Query: 633 GFTVKEENGGICFGWMGRTLTVVSAWR 659
GF V + G + W GR L SAWR
Sbjct: 459 GFHVAKRQGELVLCWHGRALVATSAWR 485
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 220 (82.5 bits), Expect = 6.8e-15, P = 6.8e-15
Identities = 98/379 (25%), Positives = 164/379 (43%)
Query: 286 QTVIEAATAVSEGKYDVASEILTRLSQATNSK-GNSEQRLMEHMCSALKSRV-NPHENPP 343
+ +++AA + E +A IL RL+Q +S G +R + AL + + N +
Sbjct: 207 EQLVKAAEVI-ESDTCLAQGILARLNQQLSSPVGKPLERAAFYFKEALNNLLHNVSQTLN 265
Query: 344 PVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDI 403
P + +F K A + + SP +N A+LE+ G +++H+IDFDI
Sbjct: 266 PYSLIF-KIAAYKS--FSEISPVLQFANFTSNQALLESFH--------GFHRLHIIDFDI 314
Query: 404 GQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEE-KLKAVRDKLSQVAERVGVCLRF 462
G GGQ+ +L L R N P +K+T A ++ +L +D L A + + L
Sbjct: 315 GYGGQWASLMQELVLRDNAAPLSLKITVFASPANHDQLELGFTQDNLKHFASEINISLDI 374
Query: 463 NVAICLKFDDLSRDSL-GCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPS 521
V L D L S E +AVN + F + P +LR VK LSP+
Sbjct: 375 QV---LSLDLLGSISWPNSSEKEAVAVNISAASF--------SHLPL--VLRFVKHLSPT 421
Query: 522 VVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRV-KVEEGLSRKLANS 580
++ ++ PF ++ + + ALF+S+++ + + D + K+E L +
Sbjct: 422 IIVCSDRGCERTDLPFSQQLAHSLHSHTALFESLDA--VNANLDAMQKIERFLIQPEIEK 479
Query: 581 VACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVKEEN 640
+ + +ER + W+A GF S ES L V GF V++++
Sbjct: 480 LVLDRSRPIERPMM--TWQAMFLQMGFSPVTHSNF-TESQAECLVQRTPVR-GFHVEKKH 535
Query: 641 GGICFGWMGRTLTVVSAWR 659
+ W L VSAWR
Sbjct: 536 NSLLLCWQRTELVGVSAWR 554
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 215 (80.7 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 102/389 (26%), Positives = 170/389 (43%)
Query: 286 QTVIEAATAVSEGKYDVASEILTRLSQATN-SKGNSEQRLMEHMCSALKSRVN-PHENPP 343
+ +I + + +A +L++L+Q S G QR + AL S + + N
Sbjct: 101 EDLIRVVDCIESDELHLAHVVLSQLNQRLQTSAGRPLQRAAFYFKEALGSLLTGTNRN-- 158
Query: 344 PVAELFG-KEHAESTQLLYDFS-----PCFSLGFMAANLAILEATMEQTTGNTIGSNKIH 397
+LF + + + + +FS P FS AN AIL++ Q++ S +H
Sbjct: 159 ---QLFSWSDIVQKIRAIKEFSGISPIPLFS--HFTANQAILDSLSSQSS-----SPFVH 208
Query: 398 VIDFDIGQGGQYMNLFHALSAR-LNGKPAIVKVTAV-ADGTASEEKLKAVRDKLSQVAER 455
V+DF+IG GGQY +L ++ + NG ++VTAV A+ A E +L V++ L+Q A
Sbjct: 209 VVDFEIGFGGQYASLMREIAEKSANG--GFLRVTAVVAEDCAVETRL--VKENLTQFAAE 264
Query: 456 VGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRV 515
+ + + + F+ LS ++ E V + +FR + E + +
Sbjct: 265 MKIRFQIEFVLMKTFEILSFKAIRFVDGERTVVLISPAIFR---RVIGIA----EFVNNL 317
Query: 516 KGLSPSVVTLVEQETNTNTA---PFMARVNEACAYYGALFDSIESTVLRDHSDRVK--VE 570
+SP+VV V+ E T TA F A +Y + +S+++ D VK VE
Sbjct: 318 GRVSPNVVVFVDSEGCTETAGSGSFRREFVSAFEFYTMVLESLDAAA--PPGDLVKKIVE 375
Query: 571 EGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRV 630
L R ++ +R ++ WR + AG +SQ A+ L +V
Sbjct: 376 TFLLRPKISAAVETAANRRSAGQM--TWREMLCAAGMRPVQLSQF-ADFQAECLLEKAQV 432
Query: 631 NPGFTVKEENGGICFGWMGRTLTVVSAWR 659
GF V + G + W GR L SAWR
Sbjct: 433 R-GFHVAKRQGELVLCWHGRALVATSAWR 460
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 182 (69.1 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 57/198 (28%), Positives = 96/198 (48%)
Query: 408 QYMNLFHALSARLNGKPA-IVKVTAVA-DGTASEEKLKAVR-----DKLSQVAERVGVCL 460
Q L +++ +L+ KP ++K+T +A D L + KL A V +
Sbjct: 2 QIPTLIDSMANKLHKKPPPLLKLTVIASDAEFHPPPLLGISYEELGSKLVNFATTRNVAM 61
Query: 461 RFNVAICLKFDDLSR--DSLGCEP---DETLAVNFAFKLFRMPDESVSTENPRDELLRRV 515
F + D LS + L +P +E L VN L +PDE + T N R L+ +
Sbjct: 62 EFRIISSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLHYIPDE-ILTSNLRSVFLKEL 120
Query: 516 KGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGLSR 575
+ L+P++VTL++++++ + F++R+ Y +D+ E + R R E +S
Sbjct: 121 RDLNPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAEMFLTRGSEQRQWYEADISW 180
Query: 576 KLANSVACEGRDRVERCE 593
K+ N VA EG +RVER E
Sbjct: 181 KIDNVVAKEGAERVERLE 198
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 203 (76.5 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 94/349 (26%), Positives = 148/349 (42%)
Query: 324 LMEHMCSALK-SRVNPHENPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEAT 382
+ E + S L+ S ++P PP +F + + + SP AN ILE+
Sbjct: 299 ITEALHSLLQDSSLSPPSLSPPQNLIF---RIAAYRAFSETSPFLQFVNFTANQTILES- 354
Query: 383 MEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAI--VKVTAVAD-GTASE 439
E G ++IH++DFDIG GGQ+ +L L+ + N + +K+TA A T S+
Sbjct: 355 FE-------GFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKITAFASPSTVSD 407
Query: 440 E-KLKAVRDKLSQVAERVGVCLRF---NVAICLKFDDLSRDSLGCEPDETLAVNFAFKLF 495
E +L+ + L A GV N+ I L E +AVN
Sbjct: 408 EFELRFTEENLRSFAGETGVSFEIELLNMEILLNPTYWPLSLFRSSEKEAIAVN------ 461
Query: 496 RMPDES-VSTENPRDELLRRVKGLSPSVVTLVEQETNTNT-APFMARVNEACAYYGALFD 553
+P S VS P +LR +K +SP+VV ++ + N APF V A YY +L +
Sbjct: 462 -LPISSMVSGYLPL--ILRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQYYTSLLE 518
Query: 554 SIESTVLRDHSDRVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMS 613
S++S L + +E + + +ER WR+ GF +S
Sbjct: 519 SLDSGNLNNAEAATSIERFCVQPSIQKLLTNRYRWMERSP---PWRSLFGQCGFTPVTLS 575
Query: 614 QIIAESMRTRLSSGNRVNPGFTVKEENGG---ICFGWMGRTLTVVSAWR 659
Q AE+ L N + GF +++ + W + L VSAW+
Sbjct: 576 QT-AETQAEYLLQRNPMR-GFHLEKRQSSSPSLVLCWQRKELVTVSAWK 622
>UNIPROTKB|Q1AHE4 [details] [associations]
symbol:SCL "SCARECROW-like protein" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF03514 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:DQ087265 UniGene:Les.23827 Uniprot:Q1AHE4
Length = 71
Score = 124 (48.7 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 587 DRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVKEENGGICFG 646
+RVER E+ GKW+ R MAGF P+S + +++ + + +T+ E++G + G
Sbjct: 2 ERVERHELLGKWKLRFTMAGFHQYPLSSYVNSVIKSLMRC---YSEHYTLVEKDGAMLLG 58
Query: 647 WMGRTLTVVSAW 658
W R L SAW
Sbjct: 59 WKKRNLISASAW 70
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.130 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 659 544 0.00095 119 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 616 (65 KB)
Total size of DFA: 285 KB (2149 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.49u 0.09s 42.58t Elapsed: 00:00:02
Total cpu time: 42.50u 0.09s 42.59t Elapsed: 00:00:02
Start: Fri May 10 23:48:10 2013 End: Fri May 10 23:48:12 2013