BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041668
(238 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96PB1|CASD1_HUMAN CAS1 domain-containing protein 1 OS=Homo sapiens GN=CASD1 PE=2 SV=1
Length = 797
Score = 38.1 bits (87), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 88 ESCPYLSNQTCCQRNGRPDSFHQKWRWQPDGCNLPWFDPLKLLDILSGKRLMFIGDSIQR 147
+SC YL + +GR F + WQP C + + + + L K + FIGDS R
Sbjct: 47 DSCEYLLS------SGR---FLGEKVWQPHSCMMHKYKISEAKNCLVDKHIAFIGDSRIR 97
Query: 148 GQFESMVCMVQSVIPEGKKSFQTIPTMEIFKAEEYNASIEFYWAP 192
F S V ++ E + IP F+ + + ++F W P
Sbjct: 98 QLFYSFVKIINPQFKEEGNKHENIP----FEDKTASVKVDFLWHP 138
>sp|Q1LW89|CASD1_DANRE CAS1 domain-containing protein 1 OS=Danio rerio GN=casd1 PE=2 SV=2
Length = 781
Score = 37.7 bits (86), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 84 VYTEESCPYLSNQTC--CQRNGRPDSFHQKWRWQPDGCNLPWFDPLKLLDILSGKRLMFI 141
V+ S Y S+ TC +GR F WQP GC L + + L KR+ F+
Sbjct: 35 VFHAASRHYGSSDTCDWLLSSGR---FLGDNVWQPYGCMLHKYKSTEAKFCLREKRIAFV 91
Query: 142 GDSIQRGQFESMVCMVQSVIPEGKKSFQTIPTME 175
GDS R F S + M+ + E + IP ++
Sbjct: 92 GDSRIRQLFYSFIKMMNPEVKEVGNKHENIPFVD 125
>sp|Q7TN73|CASD1_MOUSE CAS1 domain-containing protein 1 OS=Mus musculus GN=Casd1 PE=2 SV=1
Length = 797
Score = 37.4 bits (85), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 13/105 (12%)
Query: 88 ESCPYLSNQTCCQRNGRPDSFHQKWRWQPDGCNLPWFDPLKLLDILSGKRLMFIGDSIQR 147
+SC YL + +GR F + WQP C + + + L K + FIGDS R
Sbjct: 47 DSCEYLLS------SGR---FLGEKVWQPHSCMMHKYKISEAKTCLVDKHIAFIGDSRIR 97
Query: 148 GQFESMVCMVQSVIPEGKKSFQTIPTMEIFKAEEYNASIEFYWAP 192
F S V ++ E + IP F+ + + ++F W P
Sbjct: 98 QLFYSFVKIINPQFKEEGNKHENIP----FEDKAASVKVDFLWHP 138
>sp|A4D0V7|CPED1_HUMAN Cadherin-like and PC-esterase domain-containing protein 1 OS=Homo
sapiens GN=CPED1 PE=2 SV=1
Length = 1026
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 112 WR---WQPDGCNLPWFDPLKLLDILSGKRLMFIGDSIQRG 148
WR WQP C +L L G++++FIGDS RG
Sbjct: 742 WREITWQPHNCQYGVLTKPQLQQCLGGRKILFIGDSTNRG 781
>sp|Q9ZHD7|SYM_BUCAP Methionine--tRNA ligase OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=metG PE=3 SV=2
Length = 545
Score = 34.3 bits (77), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 36 NDRQIFQFYSE------PEVYRQRRPVFASSKDQIGESCNVSGGKWIWDNKTYPV-YTEE 88
N+++IFQFY P+ + + F SSK+Q G++C + G + + P+
Sbjct: 121 NEKKIFQFYDNTKKMFLPDRFIKGTCPFCSSKNQNGDNCEICGSIYEPTDLVNPISVISN 180
Query: 89 SCPYLSNQT 97
S P L N T
Sbjct: 181 SVPILKNTT 189
>sp|O23791|BROM1_ANACO Fruit bromelain OS=Ananas comosus PE=1 SV=1
Length = 351
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Query: 49 VYRQRRPVFASSKDQIGESCNVS-GGKWIWDNKTYP-------VYTEESCPYLSNQTCCQ 100
+Y+ + S +Q C VS G K W NK Y V TEE+ PYL+ Q C
Sbjct: 159 IYKIKTGYLVSLSEQEVLDCAVSYGCKGGWVNKAYDFIISNNGVTTEENYPYLAYQGTCN 218
Query: 101 RNGRPDSFH 109
N P+S +
Sbjct: 219 ANSFPNSAY 227
>sp|Q5XI89|NXPE4_RAT NXPE family member 4 OS=Rattus norvegicus GN=Nxpe4 PE=2 SV=1
Length = 542
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 17/115 (14%)
Query: 51 RQRRPVFASSK---DQIGESCNVSGGKWIWDNKTYPVYTEESCPYLSNQTCCQRNGRPDS 107
+Q R +F S + +G+S +S K NK PV ++ C + + P
Sbjct: 268 QQERSLFERSNIAVEIMGKSNVISVSKC---NKAVPV--KKKCKF------GMASAIPTG 316
Query: 108 FHQKWRWQPDGCNLPWFDPLKLLDILSGKRLMFIGDSIQRGQFESMVCMVQSVIP 162
K W P C+L P+K+ D L GK + +GDS R E + ++ P
Sbjct: 317 HVWKNTWNPASCSLA---PIKMKDCLRGKLVHLMGDSTMRQWMEYFKSKINTLRP 368
>sp|Q9WVC7|AKAP6_RAT A-kinase anchor protein 6 OS=Rattus norvegicus GN=Akap6 PE=2 SV=1
Length = 2314
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 86 TEESCPYLSNQTCCQRNGRPDSFHQK 111
TEES SN +CC N +PD FHQK
Sbjct: 2025 TEESASISSNASCC--NCKPDVFHQK 2048
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,145,843
Number of Sequences: 539616
Number of extensions: 3559622
Number of successful extensions: 6711
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 6707
Number of HSP's gapped (non-prelim): 10
length of query: 238
length of database: 191,569,459
effective HSP length: 114
effective length of query: 124
effective length of database: 130,053,235
effective search space: 16126601140
effective search space used: 16126601140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)