Query 041668
Match_columns 238
No_of_seqs 163 out of 702
Neff 5.2
Searched_HMMs 46136
Date Fri Mar 29 09:29:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041668.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041668hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02629 powdery mildew resist 100.0 2.4E-67 5.2E-72 493.8 17.2 169 63-238 48-217 (387)
2 PF14416 PMR5N: PMR5 N termina 99.9 3.7E-28 8E-33 171.8 4.8 55 65-120 1-55 (55)
3 PF13839 PC-Esterase: GDSL/SGN 99.9 8.6E-24 1.9E-28 183.2 8.8 102 121-238 1-112 (263)
4 cd01842 SGNH_hydrolase_like_5 96.5 0.0026 5.6E-08 55.3 3.4 22 138-159 2-23 (183)
5 cd01834 SGNH_hydrolase_like_2 77.1 1.2 2.6E-05 36.1 1.2 15 135-149 1-15 (191)
6 cd01829 SGNH_hydrolase_peri2 S 74.6 2.7 5.9E-05 34.8 2.7 21 137-157 1-21 (200)
7 cd01841 NnaC_like NnaC (CMP-Ne 71.4 2 4.4E-05 34.8 1.2 14 136-149 1-14 (174)
8 COG2845 Uncharacterized protei 61.9 6.7 0.00015 37.4 2.7 31 129-159 110-140 (354)
9 cd01825 SGNH_hydrolase_peri1 S 60.9 3.5 7.6E-05 33.5 0.6 17 137-153 1-18 (189)
10 cd01844 SGNH_hydrolase_like_6 57.7 5.2 0.00011 32.9 1.1 13 137-149 1-13 (177)
11 PF00185 OTCace: Aspartate/orn 57.2 6.7 0.00015 32.7 1.7 25 134-159 1-25 (158)
12 PF12026 DUF3513: Domain of un 55.8 1.1 2.4E-05 39.9 -3.4 18 132-149 131-148 (210)
13 cd01838 Isoamyl_acetate_hydrol 53.5 5.8 0.00013 32.2 0.7 13 137-149 1-13 (199)
14 cd01835 SGNH_hydrolase_like_3 53.3 5.8 0.00013 32.7 0.7 13 136-148 2-14 (193)
15 cd01832 SGNH_hydrolase_like_1 53.2 6.3 0.00014 32.0 0.9 11 137-147 1-11 (185)
16 cd01827 sialate_O-acetylestera 47.7 8.3 0.00018 31.5 0.8 13 137-149 2-14 (188)
17 cd01833 XynB_like SGNH_hydrola 47.5 6.7 0.00015 31.2 0.2 12 137-148 2-13 (157)
18 cd01831 Endoglucanase_E_like E 46.8 9 0.0002 31.2 0.9 14 137-150 1-14 (169)
19 cd01822 Lysophospholipase_L1_l 46.5 8.6 0.00019 30.8 0.7 12 137-148 2-13 (177)
20 cd01820 PAF_acetylesterase_lik 46.1 11 0.00024 32.0 1.3 17 133-149 30-46 (214)
21 PRK10528 multifunctional acyl- 44.2 12 0.00025 31.5 1.2 15 135-149 10-24 (191)
22 PRK14805 ornithine carbamoyltr 40.6 16 0.00035 33.9 1.6 26 132-159 144-169 (302)
23 cd00229 SGNH_hydrolase SGNH_hy 40.2 10 0.00022 28.9 0.2 15 138-152 1-15 (187)
24 PF09949 DUF2183: Uncharacteri 39.3 23 0.00049 27.8 2.0 23 126-148 55-77 (100)
25 cd01836 FeeA_FeeB_like SGNH_hy 38.0 14 0.00031 30.2 0.8 14 136-149 3-16 (191)
26 cd01830 XynE_like SGNH_hydrola 37.7 15 0.00033 30.8 0.9 12 137-148 1-12 (204)
27 cd01839 SGNH_arylesterase_like 37.3 15 0.00033 30.7 0.9 12 137-148 1-12 (208)
28 cd04501 SGNH_hydrolase_like_4 37.3 15 0.00033 29.8 0.8 12 136-147 1-12 (183)
29 cd01828 sialate_O-acetylestera 36.7 16 0.00035 29.3 0.9 13 138-150 2-14 (169)
30 PF11119 DUF2633: Protein of u 34.2 39 0.00085 24.5 2.4 22 1-22 1-22 (59)
31 cd04502 SGNH_hydrolase_like_7 32.2 21 0.00045 28.8 0.8 12 138-149 2-13 (171)
32 PRK04284 ornithine carbamoyltr 32.0 28 0.00061 32.8 1.8 27 132-159 152-178 (332)
33 PF13472 Lipase_GDSL_2: GDSL-l 31.4 25 0.00053 27.2 1.1 12 139-150 1-12 (179)
34 PF12729 4HB_MCP_1: Four helix 30.7 53 0.0012 25.6 3.0 27 1-27 2-28 (181)
35 cd01821 Rhamnogalacturan_acety 30.5 22 0.00047 29.5 0.7 14 137-150 2-15 (198)
36 PF06072 Herpes_US9: Alphaherp 30.1 45 0.00098 24.2 2.1 28 3-30 27-54 (60)
37 cd01840 SGNH_hydrolase_yrhL_li 29.7 26 0.00057 28.1 1.0 18 138-155 2-19 (150)
38 PF00702 Hydrolase: haloacid d 27.5 44 0.00096 27.4 2.0 20 127-146 185-206 (215)
39 PRK02102 ornithine carbamoyltr 27.2 40 0.00086 31.9 1.9 27 132-159 152-178 (331)
40 PF14647 FAM91_N: FAM91 N-term 27.2 58 0.0013 30.8 2.9 30 121-160 109-138 (308)
41 PLN02342 ornithine carbamoyltr 27.2 41 0.00089 32.0 2.0 26 132-159 191-216 (348)
42 TIGR01489 DKMTPPase-SF 2,3-dik 27.1 60 0.0013 26.1 2.8 13 135-147 162-174 (188)
43 cd04506 SGNH_hydrolase_YpmR_li 27.0 29 0.00062 28.8 0.8 12 137-148 1-12 (204)
44 PRK00856 pyrB aspartate carbam 26.8 38 0.00083 31.5 1.7 28 132-159 153-180 (305)
45 COG0078 ArgF Ornithine carbamo 26.3 44 0.00094 31.6 1.9 21 133-155 151-171 (310)
46 PLN02527 aspartate carbamoyltr 25.5 44 0.00096 31.0 1.8 27 132-158 148-174 (306)
47 PRK13159 cytochrome c-type bio 24.8 74 0.0016 27.2 2.9 18 2-19 4-21 (155)
48 PRK03515 ornithine carbamoyltr 24.7 44 0.00096 31.6 1.7 26 133-159 154-179 (336)
49 PF01861 DUF43: Protein of unk 24.1 34 0.00073 31.3 0.7 12 133-144 43-54 (243)
50 PRK13150 cytochrome c-type bio 23.6 83 0.0018 27.0 3.0 26 2-30 4-29 (159)
51 PRK01713 ornithine carbamoyltr 23.6 50 0.0011 31.1 1.9 26 133-159 154-179 (334)
52 PRK10113 cell division modulat 23.1 39 0.00084 25.4 0.8 18 131-148 37-56 (80)
53 PRK08192 aspartate carbamoyltr 22.2 53 0.0012 31.0 1.7 26 133-158 157-182 (338)
54 TIGR00670 asp_carb_tr aspartat 21.3 58 0.0013 30.2 1.8 29 131-159 146-174 (301)
55 PRK13165 cytochrome c-type bio 20.4 1.1E+02 0.0025 26.2 3.2 12 2-13 4-15 (160)
56 PF07423 DUF1510: Protein of u 20.2 92 0.002 27.9 2.7 33 108-152 124-157 (217)
57 COG0034 PurF Glutamine phospho 20.1 51 0.0011 32.9 1.1 33 128-160 341-374 (470)
58 PRK11891 aspartate carbamoyltr 20.1 67 0.0015 31.6 2.0 26 133-158 239-264 (429)
No 1
>PLN02629 powdery mildew resistance 5
Probab=100.00 E-value=2.4e-67 Score=493.82 Aligned_cols=169 Identities=36% Similarity=0.805 Sum_probs=157.7
Q ss_pred CCCCCCcCcccceeeCCCCCCCCCCCCCC-CccCccccccCCCCCCcCceeeeeCCCCCCCCCChHHHHHHHcCCceEEe
Q 041668 63 QIGESCNVSGGKWIWDNKTYPVYTEESCP-YLSNQTCCQRNGRPDSFHQKWRWQPDGCNLPWFDPLKLLDILSGKRLMFI 141 (238)
Q Consensus 63 ~~~~~Cd~~~G~WV~d~~~~PlY~~~sCp-~i~~~~~C~~nGRpD~~y~~WrWqP~gC~Lprfd~~~fl~~lrgKrivFV 141 (238)
...+.||+|+|+||+|+ ++|+|++.+|| ||++++||++|||||++|++|||||++|+||||||.+||++|||||||||
T Consensus 48 ~~~~~CD~f~G~WV~D~-s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FV 126 (387)
T PLN02629 48 ANQSTCALFVGTWVRDD-SYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFV 126 (387)
T ss_pred CCccccCCCCCeEecCC-CCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEe
Confidence 45688999999999996 67999999999 99999999999999999999999999999999999999999999999999
Q ss_pred ehhhhHHHHHHHHhhhccccCCCceeeeeCCceeeEEecccceEEEEEEccceecccCCCCCcccceeeeEeeccccccc
Q 041668 142 GDSIQRGQFESMVCMVQSVIPEGKKSFQTIPTMEIFKAEEYNASIEFYWAPFIVESISDHATNHTVLKRLVYLDSITNQG 221 (238)
Q Consensus 142 GDSl~Rnq~~SL~ClL~~~~p~~~~~~~~~~~~~~~~f~~~n~tv~f~WsPfLv~~~~~~~~~~~~~~~~l~lD~i~~~~ 221 (238)
||||+|||||||+|||++++|..++.+.++++...|+|++||+||+||||||||+.+++. ..++|+||++++++
T Consensus 127 GDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~------~~~~l~LD~id~~a 200 (387)
T PLN02629 127 GDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQ------GKRVLKLEEISGNA 200 (387)
T ss_pred ccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCC------CceeEEecCcchhh
Confidence 999999999999999999998776666677788899999999999999999999987543 13579999999899
Q ss_pred CCCCCCcEEEEcCCCCC
Q 041668 222 KSWQGVDMLVFESYAWW 238 (238)
Q Consensus 222 ~~w~~~DvLVfntGhWw 238 (238)
++|+++|||||||||||
T Consensus 201 ~~w~~~DvlVfntghWw 217 (387)
T PLN02629 201 NAWRDADVLIFNTGHWW 217 (387)
T ss_pred hhhccCCEEEEeCcccc
Confidence 99999999999999999
No 2
>PF14416 PMR5N: PMR5 N terminal Domain
Probab=99.94 E-value=3.7e-28 Score=171.83 Aligned_cols=55 Identities=47% Similarity=1.182 Sum_probs=52.3
Q ss_pred CCCCcCcccceeeCCCCCCCCCCCCCCCccCccccccCCCCCCcCceeeeeCCCCC
Q 041668 65 GESCNVSGGKWIWDNKTYPVYTEESCPYLSNQTCCQRNGRPDSFHQKWRWQPDGCN 120 (238)
Q Consensus 65 ~~~Cd~~~G~WV~d~~~~PlY~~~sCp~i~~~~~C~~nGRpD~~y~~WrWqP~gC~ 120 (238)
+++||+|+|+||+|+ ++|+|++.+||||+++|||++|||||++|++|||||++|+
T Consensus 1 e~~Cd~~~G~WV~D~-~~PlY~~~~Cp~i~~~~nC~~nGRpD~~y~~wRWqP~~Cd 55 (55)
T PF14416_consen 1 EKRCDYFDGRWVPDP-SYPLYTNSTCPFIDEGFNCQKNGRPDSDYLKWRWQPRGCD 55 (55)
T ss_pred CCccCcccCEEEeCC-CCCccCCCCCCcCCCccchhhcCCCCCccceeeecCCCCC
Confidence 468999999999997 5699999999999999999999999999999999999996
No 3
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=99.90 E-value=8.6e-24 Score=183.24 Aligned_cols=102 Identities=36% Similarity=0.709 Sum_probs=82.0
Q ss_pred CCCCChHHHHHHHcCCceEEeehhhhHHHHHHHHhhhccccC-----CCceeeeeCCceeeEEecccceEEEEEEcccee
Q 041668 121 LPWFDPLKLLDILSGKRLMFIGDSIQRGQFESMVCMVQSVIP-----EGKKSFQTIPTMEIFKAEEYNASIEFYWAPFIV 195 (238)
Q Consensus 121 Lprfd~~~fl~~lrgKrivFVGDSl~Rnq~~SL~ClL~~~~p-----~~~~~~~~~~~~~~~~f~~~n~tv~f~WsPfLv 195 (238)
|++||+.++|++||||+|+|||||++||+|+||+|+|.+..+ +........+....+.+.++|++|+|+|+|||+
T Consensus 1 ~~~~d~~~cL~~lr~k~i~fiGDS~~Rq~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~p~l~ 80 (263)
T PF13839_consen 1 LPRFDARECLQRLRNKRIVFIGDSTTRQQYESLVCLLGPEVPSWQESPHSGIEFPNHRNFRYNFPDYNVTLSFYWDPFLV 80 (263)
T ss_pred CChhhHHHHHHHccCCEEEEEechhhHHHHHHHHHHHhccccccccccccccccccCCceEEeecCCCeEEEEecccccc
Confidence 689999999999999999999999999999999999998776 222222333456678889999999999999999
Q ss_pred cccCCCCCcccceeeeEeecccc-cccCCCC----CCcEEEEcCCCCC
Q 041668 196 ESISDHATNHTVLKRLVYLDSIT-NQGKSWQ----GVDMLVFESYAWW 238 (238)
Q Consensus 196 ~~~~~~~~~~~~~~~~l~lD~i~-~~~~~w~----~~DvLVfntGhWw 238 (238)
+. +|.++ +....|. .+||||+|+|+||
T Consensus 81 ~~----------------l~~~~~~~~~~~~~~~~~pdvvV~nsG~W~ 112 (263)
T PF13839_consen 81 DQ----------------LDSIDEEIANNWPTSGARPDVVVINSGLWY 112 (263)
T ss_pred cc----------------ccccchhhhccccccccCCCEEEEEcchhh
Confidence 75 22222 2344454 8999999999997
No 4
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.47 E-value=0.0026 Score=55.28 Aligned_cols=22 Identities=36% Similarity=0.758 Sum_probs=20.7
Q ss_pred eEEeehhhhHHHHHHHHhhhcc
Q 041668 138 LMFIGDSIQRGQFESMVCMVQS 159 (238)
Q Consensus 138 ivFVGDSl~Rnq~~SL~ClL~~ 159 (238)
++|+|||+.|-+|--|+|||+.
T Consensus 2 v~~lgds~~ravykdlv~l~q~ 23 (183)
T cd01842 2 VVILGDSIQRAVYKDLVLLLQK 23 (183)
T ss_pred EEEEccHHHHHHHHHHHHHhcC
Confidence 6899999999999999999984
No 5
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=77.14 E-value=1.2 Score=36.09 Aligned_cols=15 Identities=47% Similarity=0.886 Sum_probs=13.9
Q ss_pred CCceEEeehhhhHHH
Q 041668 135 GKRLMFIGDSIQRGQ 149 (238)
Q Consensus 135 gKrivFVGDSl~Rnq 149 (238)
|++|+++|||++...
T Consensus 1 ~~~v~~~GDSit~g~ 15 (191)
T cd01834 1 GDRIVFIGNSITDRG 15 (191)
T ss_pred CCEEEEeCCChhhcc
Confidence 799999999999976
No 6
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=74.58 E-value=2.7 Score=34.76 Aligned_cols=21 Identities=29% Similarity=0.589 Sum_probs=17.2
Q ss_pred ceEEeehhhhHHHHHHHHhhh
Q 041668 137 RLMFIGDSIQRGQFESMVCMV 157 (238)
Q Consensus 137 rivFVGDSl~Rnq~~SL~ClL 157 (238)
||+|+|||++...+-++...+
T Consensus 1 ril~iGDS~~~g~~~~l~~~~ 21 (200)
T cd01829 1 RVLVIGDSLAQGLAPGLLRAL 21 (200)
T ss_pred CEEEEechHHHHHHHHHHHHh
Confidence 689999999999887766444
No 7
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=71.43 E-value=2 Score=34.78 Aligned_cols=14 Identities=50% Similarity=0.878 Sum_probs=12.0
Q ss_pred CceEEeehhhhHHH
Q 041668 136 KRLMFIGDSIQRGQ 149 (238)
Q Consensus 136 KrivFVGDSl~Rnq 149 (238)
|+|+|+|||++..-
T Consensus 1 ~~iv~~GdS~t~~~ 14 (174)
T cd01841 1 KNIVFIGDSLFEGW 14 (174)
T ss_pred CCEEEEcchhhhcC
Confidence 68999999999753
No 8
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=61.86 E-value=6.7 Score=37.40 Aligned_cols=31 Identities=16% Similarity=0.314 Sum_probs=25.7
Q ss_pred HHHHHcCCceEEeehhhhHHHHHHHHhhhcc
Q 041668 129 LLDILSGKRLMFIGDSIQRGQFESMVCMVQS 159 (238)
Q Consensus 129 fl~~lrgKrivFVGDSl~Rnq~~SL~ClL~~ 159 (238)
..+.=.++++.|||||+++.+-+.|...|..
T Consensus 110 ~~k~~~a~kvLvvGDslm~gla~gl~~al~t 140 (354)
T COG2845 110 AAKSRDADKVLVVGDSLMQGLAEGLDKALAT 140 (354)
T ss_pred hhhCCCCCEEEEechHHhhhhHHHHHHHhcc
Confidence 3444458999999999999999999888865
No 9
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=60.91 E-value=3.5 Score=33.52 Aligned_cols=17 Identities=35% Similarity=0.565 Sum_probs=12.4
Q ss_pred ceEEeehhhhHH-HHHHH
Q 041668 137 RLMFIGDSIQRG-QFESM 153 (238)
Q Consensus 137 rivFVGDSl~Rn-q~~SL 153 (238)
||+|+|||++-. .|-+.
T Consensus 1 ~iv~~GDS~t~g~~~~~~ 18 (189)
T cd01825 1 RIAQLGDSHIAGDFFTDV 18 (189)
T ss_pred CeeEecCccccccchhhH
Confidence 799999999963 34443
No 10
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=57.72 E-value=5.2 Score=32.87 Aligned_cols=13 Identities=38% Similarity=0.698 Sum_probs=11.3
Q ss_pred ceEEeehhhhHHH
Q 041668 137 RLMFIGDSIQRGQ 149 (238)
Q Consensus 137 rivFVGDSl~Rnq 149 (238)
||+|+|||++...
T Consensus 1 ~iv~~GDSit~G~ 13 (177)
T cd01844 1 PWVFYGTSISQGA 13 (177)
T ss_pred CEEEEeCchhcCc
Confidence 6899999998865
No 11
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=57.16 E-value=6.7 Score=32.71 Aligned_cols=25 Identities=16% Similarity=0.416 Sum_probs=21.2
Q ss_pred cCCceEEeehhhhHHHHHHHHhhhcc
Q 041668 134 SGKRLMFIGDSIQRGQFESMVCMVQS 159 (238)
Q Consensus 134 rgKrivFVGDSl~Rnq~~SL~ClL~~ 159 (238)
+|++|+|||| ..-|...|++.++..
T Consensus 1 ~gl~i~~vGD-~~~rv~~Sl~~~~~~ 25 (158)
T PF00185_consen 1 KGLKIAYVGD-GHNRVAHSLIELLAK 25 (158)
T ss_dssp TTEEEEEESS-TTSHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCChHHHHHHHHHHH
Confidence 5899999999 667889999988874
No 12
>PF12026 DUF3513: Domain of unknown function (DUF3513); InterPro: IPR021901 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 192 to 218 amino acids in length. This domain is found associated with PF00018 from PFAM, PF08824 from PFAM. This domain has a conserved QPP sequence motif. ; PDB: 3T6G_D 1X27_N.
Probab=55.81 E-value=1.1 Score=39.93 Aligned_cols=18 Identities=50% Similarity=0.879 Sum_probs=14.5
Q ss_pred HHcCCceEEeehhhhHHH
Q 041668 132 ILSGKRLMFIGDSIQRGQ 149 (238)
Q Consensus 132 ~lrgKrivFVGDSl~Rnq 149 (238)
+|-|.++|||||++.|+.
T Consensus 131 Il~ahkLVfiGDTl~r~~ 148 (210)
T PF12026_consen 131 ILSAHKLVFIGDTLCREA 148 (210)
T ss_dssp HHHHHHHHHHHHHHHHC-
T ss_pred EEEeeeeeeeccHHHHHh
Confidence 455789999999999875
No 13
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=53.46 E-value=5.8 Score=32.25 Aligned_cols=13 Identities=31% Similarity=0.618 Sum_probs=11.2
Q ss_pred ceEEeehhhhHHH
Q 041668 137 RLMFIGDSIQRGQ 149 (238)
Q Consensus 137 rivFVGDSl~Rnq 149 (238)
||+|+|||++...
T Consensus 1 ~i~~~GDSit~g~ 13 (199)
T cd01838 1 KIVLFGDSITQFS 13 (199)
T ss_pred CEEEecCcccccc
Confidence 6899999999863
No 14
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=53.32 E-value=5.8 Score=32.74 Aligned_cols=13 Identities=54% Similarity=0.953 Sum_probs=11.6
Q ss_pred CceEEeehhhhHH
Q 041668 136 KRLMFIGDSIQRG 148 (238)
Q Consensus 136 KrivFVGDSl~Rn 148 (238)
++|+|+|||++..
T Consensus 2 ~~i~~lGDSit~G 14 (193)
T cd01835 2 KRLIVVGDSLVYG 14 (193)
T ss_pred cEEEEEcCccccC
Confidence 6899999999975
No 15
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=53.17 E-value=6.3 Score=32.04 Aligned_cols=11 Identities=45% Similarity=0.748 Sum_probs=10.0
Q ss_pred ceEEeehhhhH
Q 041668 137 RLMFIGDSIQR 147 (238)
Q Consensus 137 rivFVGDSl~R 147 (238)
||+|+|||++.
T Consensus 1 ~i~~~GDSit~ 11 (185)
T cd01832 1 RYVALGDSITE 11 (185)
T ss_pred CeeEecchhhc
Confidence 69999999996
No 16
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=47.71 E-value=8.3 Score=31.51 Aligned_cols=13 Identities=31% Similarity=0.715 Sum_probs=10.5
Q ss_pred ceEEeehhhhHHH
Q 041668 137 RLMFIGDSIQRGQ 149 (238)
Q Consensus 137 rivFVGDSl~Rnq 149 (238)
||+|+|||++-..
T Consensus 2 ~i~~~GDSit~G~ 14 (188)
T cd01827 2 KVACVGNSITEGA 14 (188)
T ss_pred eEEEEeccccccc
Confidence 6999999996543
No 17
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=47.46 E-value=6.7 Score=31.15 Aligned_cols=12 Identities=58% Similarity=0.925 Sum_probs=10.0
Q ss_pred ceEEeehhhhHH
Q 041668 137 RLMFIGDSIQRG 148 (238)
Q Consensus 137 rivFVGDSl~Rn 148 (238)
+|++||||++-.
T Consensus 2 ~~~~~Gds~~~g 13 (157)
T cd01833 2 RIMPLGDSITWG 13 (157)
T ss_pred ceeecCCceeec
Confidence 689999998755
No 18
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=46.84 E-value=9 Score=31.16 Aligned_cols=14 Identities=50% Similarity=0.702 Sum_probs=11.3
Q ss_pred ceEEeehhhhHHHH
Q 041668 137 RLMFIGDSIQRGQF 150 (238)
Q Consensus 137 rivFVGDSl~Rnq~ 150 (238)
+|+|+|||++-...
T Consensus 1 ~i~~iGDSit~G~~ 14 (169)
T cd01831 1 KIEFIGDSITCGYG 14 (169)
T ss_pred CEEEEeccccccCc
Confidence 58999999987543
No 19
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=46.46 E-value=8.6 Score=30.84 Aligned_cols=12 Identities=33% Similarity=0.783 Sum_probs=10.2
Q ss_pred ceEEeehhhhHH
Q 041668 137 RLMFIGDSIQRG 148 (238)
Q Consensus 137 rivFVGDSl~Rn 148 (238)
+|+|+|||++-.
T Consensus 2 ~i~~~GDSit~G 13 (177)
T cd01822 2 TILALGDSLTAG 13 (177)
T ss_pred eEEEEccccccC
Confidence 699999999744
No 20
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=46.12 E-value=11 Score=32.01 Aligned_cols=17 Identities=35% Similarity=0.548 Sum_probs=13.6
Q ss_pred HcCCceEEeehhhhHHH
Q 041668 133 LSGKRLMFIGDSIQRGQ 149 (238)
Q Consensus 133 lrgKrivFVGDSl~Rnq 149 (238)
....+|+|+|||++...
T Consensus 30 ~~~~~iv~lGDSit~g~ 46 (214)
T cd01820 30 QKEPDVVFIGDSITQNW 46 (214)
T ss_pred cCCCCEEEECchHhhhh
Confidence 34567999999999864
No 21
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=44.17 E-value=12 Score=31.52 Aligned_cols=15 Identities=33% Similarity=0.716 Sum_probs=12.8
Q ss_pred CCceEEeehhhhHHH
Q 041668 135 GKRLMFIGDSIQRGQ 149 (238)
Q Consensus 135 gKrivFVGDSl~Rnq 149 (238)
+.+|+|+|||++...
T Consensus 10 ~~~iv~~GDSit~G~ 24 (191)
T PRK10528 10 ADTLLILGDSLSAGY 24 (191)
T ss_pred CCEEEEEeCchhhcC
Confidence 679999999999663
No 22
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=40.56 E-value=16 Score=33.90 Aligned_cols=26 Identities=19% Similarity=0.276 Sum_probs=21.2
Q ss_pred HHcCCceEEeehhhhHHHHHHHHhhhcc
Q 041668 132 ILSGKRLMFIGDSIQRGQFESMVCMVQS 159 (238)
Q Consensus 132 ~lrgKrivFVGDSl~Rnq~~SL~ClL~~ 159 (238)
.++|++|+||||. .|...|++.++..
T Consensus 144 ~l~g~kva~vGD~--~~v~~S~~~~~~~ 169 (302)
T PRK14805 144 DVSKVKLAYVGDG--NNVTHSLMYGAAI 169 (302)
T ss_pred CcCCcEEEEEcCC--CccHHHHHHHHHH
Confidence 4678999999994 5788999888764
No 23
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=40.25 E-value=10 Score=28.92 Aligned_cols=15 Identities=47% Similarity=0.634 Sum_probs=11.7
Q ss_pred eEEeehhhhHHHHHH
Q 041668 138 LMFIGDSIQRGQFES 152 (238)
Q Consensus 138 ivFVGDSl~Rnq~~S 152 (238)
|+|+|||++......
T Consensus 1 i~~~GDS~~~g~~~~ 15 (187)
T cd00229 1 ILVIGDSITAGYGAS 15 (187)
T ss_pred CeeeccccccccCCC
Confidence 689999999876433
No 24
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=39.30 E-value=23 Score=27.82 Aligned_cols=23 Identities=26% Similarity=0.434 Sum_probs=18.7
Q ss_pred hHHHHHHHcCCceEEeehhhhHH
Q 041668 126 PLKLLDILSGKRLMFIGDSIQRG 148 (238)
Q Consensus 126 ~~~fl~~lrgKrivFVGDSl~Rn 148 (238)
-.++++..-++++++||||-..-
T Consensus 55 i~~i~~~fP~~kfiLIGDsgq~D 77 (100)
T PF09949_consen 55 IERILRDFPERKFILIGDSGQHD 77 (100)
T ss_pred HHHHHHHCCCCcEEEEeeCCCcC
Confidence 44677777899999999998764
No 25
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=37.97 E-value=14 Score=30.24 Aligned_cols=14 Identities=43% Similarity=0.703 Sum_probs=11.6
Q ss_pred CceEEeehhhhHHH
Q 041668 136 KRLMFIGDSIQRGQ 149 (238)
Q Consensus 136 KrivFVGDSl~Rnq 149 (238)
.|++|+|||++-..
T Consensus 3 ~~i~~~GDSit~G~ 16 (191)
T cd01836 3 LRLLVLGDSTAAGV 16 (191)
T ss_pred eEEEEEeccccccc
Confidence 47999999999763
No 26
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=37.70 E-value=15 Score=30.85 Aligned_cols=12 Identities=42% Similarity=0.764 Sum_probs=10.2
Q ss_pred ceEEeehhhhHH
Q 041668 137 RLMFIGDSIQRG 148 (238)
Q Consensus 137 rivFVGDSl~Rn 148 (238)
+|+|+|||++-.
T Consensus 1 ~iv~~GDSiT~G 12 (204)
T cd01830 1 SVVALGDSITDG 12 (204)
T ss_pred CEEEEecccccC
Confidence 489999999964
No 27
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=37.33 E-value=15 Score=30.70 Aligned_cols=12 Identities=33% Similarity=0.592 Sum_probs=10.2
Q ss_pred ceEEeehhhhHH
Q 041668 137 RLMFIGDSIQRG 148 (238)
Q Consensus 137 rivFVGDSl~Rn 148 (238)
+|+|+|||++..
T Consensus 1 ~I~~~GDSiT~G 12 (208)
T cd01839 1 TILCFGDSNTWG 12 (208)
T ss_pred CEEEEecCcccC
Confidence 689999999854
No 28
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=37.31 E-value=15 Score=29.82 Aligned_cols=12 Identities=42% Similarity=0.678 Sum_probs=10.4
Q ss_pred CceEEeehhhhH
Q 041668 136 KRLMFIGDSIQR 147 (238)
Q Consensus 136 KrivFVGDSl~R 147 (238)
.||+|+|||++.
T Consensus 1 ~~i~~~GDSi~~ 12 (183)
T cd04501 1 MRVVCLGDSITY 12 (183)
T ss_pred CeEEEEcccccc
Confidence 379999999986
No 29
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=36.70 E-value=16 Score=29.33 Aligned_cols=13 Identities=46% Similarity=0.869 Sum_probs=10.9
Q ss_pred eEEeehhhhHHHH
Q 041668 138 LMFIGDSIQRGQF 150 (238)
Q Consensus 138 ivFVGDSl~Rnq~ 150 (238)
|+|+|||+++..-
T Consensus 2 v~~~GdSi~~~~~ 14 (169)
T cd01828 2 LVFLGDSLTEGGP 14 (169)
T ss_pred EEEecchhhccCc
Confidence 7899999998753
No 30
>PF11119 DUF2633: Protein of unknown function (DUF2633); InterPro: IPR022576 This family is conserved largely in Proteobacteria. Several members are named as YfgG. The function is not known.
Probab=34.23 E-value=39 Score=24.47 Aligned_cols=22 Identities=23% Similarity=0.232 Sum_probs=18.1
Q ss_pred CcchhhhHHHHHHHHHHHHHHH
Q 041668 1 MRRRTTVQSLITVATALLLIVG 22 (238)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~ 22 (238)
||||+.+|..--|+|.+|+++=
T Consensus 1 ~r~k~~~~mtriVLLISfiIlf 22 (59)
T PF11119_consen 1 MRRKKNSRMTRIVLLISFIILF 22 (59)
T ss_pred CCCcccchHHHHHHHHHHHHHH
Confidence 7888888888888888888764
No 31
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=32.18 E-value=21 Score=28.83 Aligned_cols=12 Identities=33% Similarity=0.420 Sum_probs=10.4
Q ss_pred eEEeehhhhHHH
Q 041668 138 LMFIGDSIQRGQ 149 (238)
Q Consensus 138 ivFVGDSl~Rnq 149 (238)
|+|||||+.+.-
T Consensus 2 i~~~g~s~~~~w 13 (171)
T cd04502 2 ILFYGSSSIRLW 13 (171)
T ss_pred EEEEcCchhcch
Confidence 799999998865
No 32
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=32.03 E-value=28 Score=32.79 Aligned_cols=27 Identities=7% Similarity=0.162 Sum_probs=21.3
Q ss_pred HHcCCceEEeehhhhHHHHHHHHhhhcc
Q 041668 132 ILSGKRLMFIGDSIQRGQFESMVCMVQS 159 (238)
Q Consensus 132 ~lrgKrivFVGDSl~Rnq~~SL~ClL~~ 159 (238)
.++|++|+||||..+ |...|++-++..
T Consensus 152 ~l~g~kia~vGD~~~-~v~~Sl~~~~~~ 178 (332)
T PRK04284 152 PYKDIKFTYVGDGRN-NVANALMQGAAI 178 (332)
T ss_pred CcCCcEEEEecCCCc-chHHHHHHHHHH
Confidence 367899999999755 578888887763
No 33
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=31.40 E-value=25 Score=27.25 Aligned_cols=12 Identities=50% Similarity=0.778 Sum_probs=9.7
Q ss_pred EEeehhhhHHHH
Q 041668 139 MFIGDSIQRGQF 150 (238)
Q Consensus 139 vFVGDSl~Rnq~ 150 (238)
+|+|||++-...
T Consensus 1 v~~GDS~t~g~~ 12 (179)
T PF13472_consen 1 VFLGDSITAGYG 12 (179)
T ss_dssp EEEESHHHHTTT
T ss_pred CEEccccccCCC
Confidence 699999997643
No 34
>PF12729 4HB_MCP_1: Four helix bundle sensory module for signal transduction; InterPro: IPR024478 This entry represents a four-helix bundle that operates as a ubiquitous sensory module in prokaryotic signal-transduction, which is known as four-helix bundles methyl-accepting chemotaxis protein (4HB_MCP) domain. The 4HB_MCP is always found between two predicted transmembrane helices indicating that it detects only extracellular signals. In many cases the domain is associated with a cytoplasmic HAMP domain suggesting that most proteins carrying the bundle might share the mechanism of transmembrane signalling which is well-characterised in E coli chemoreceptors [].
Probab=30.65 E-value=53 Score=25.59 Aligned_cols=27 Identities=30% Similarity=0.278 Sum_probs=22.1
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhhhhh
Q 041668 1 MRRRTTVQSLITVATALLLIVGTARSL 27 (238)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 27 (238)
|.=+++|-..|.+++++++++|.+.+.
T Consensus 2 l~I~~KL~~~f~~~~~l~~~~~~~~~~ 28 (181)
T PF12729_consen 2 LSIRTKLILGFGLIILLLLIVGIVGLY 28 (181)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445788999999999999999988744
No 35
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=30.50 E-value=22 Score=29.52 Aligned_cols=14 Identities=21% Similarity=0.242 Sum_probs=11.6
Q ss_pred ceEEeehhhhHHHH
Q 041668 137 RLMFIGDSIQRGQF 150 (238)
Q Consensus 137 rivFVGDSl~Rnq~ 150 (238)
+|+|+|||++....
T Consensus 2 ~i~~~GDS~t~G~~ 15 (198)
T cd01821 2 TIFLAGDSTVADYD 15 (198)
T ss_pred EEEEEecCCcccCC
Confidence 68999999987653
No 36
>PF06072 Herpes_US9: Alphaherpesvirus tegument protein US9; InterPro: IPR009278 This family consists of several US9 and related proteins from the Alphaherpesviruses. The function of the US9 protein is unknown although in Bovine herpesvirus 5 Us9 is essential for the anterograde spread of the virus from the olfactory mucosa to the bulb [].; GO: 0019033 viral tegument
Probab=30.12 E-value=45 Score=24.23 Aligned_cols=28 Identities=14% Similarity=0.055 Sum_probs=13.7
Q ss_pred chhhhHHHHHHHHHHHHHHHhhhhhccc
Q 041668 3 RRTTVQSLITVATALLLIVGTARSLLDN 30 (238)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 (238)
||+|.-.+.-..+..+++++.+++.|-.
T Consensus 27 ~RrRrc~~~v~~v~~~~~~c~~S~~lG~ 54 (60)
T PF06072_consen 27 RRRRRCRLAVAIVFAVVALCVLSGGLGA 54 (60)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444333334444466666665544
No 37
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=29.70 E-value=26 Score=28.10 Aligned_cols=18 Identities=22% Similarity=0.255 Sum_probs=12.5
Q ss_pred eEEeehhhhHHHHHHHHh
Q 041668 138 LMFIGDSIQRGQFESMVC 155 (238)
Q Consensus 138 ivFVGDSl~Rnq~~SL~C 155 (238)
|.|+|||++-..-..|-.
T Consensus 2 v~~~GDSv~~~~~~~~~~ 19 (150)
T cd01840 2 ITAIGDSVMLDSSPALQE 19 (150)
T ss_pred eeEEeehHHHchHHHHHH
Confidence 689999998865444333
No 38
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=27.54 E-value=44 Score=27.35 Aligned_cols=20 Identities=20% Similarity=0.556 Sum_probs=15.6
Q ss_pred HHHHHHHc--CCceEEeehhhh
Q 041668 127 LKLLDILS--GKRLMFIGDSIQ 146 (238)
Q Consensus 127 ~~fl~~lr--gKrivFVGDSl~ 146 (238)
..+++.|+ +..+++|||+++
T Consensus 185 ~~~i~~l~~~~~~v~~vGDg~n 206 (215)
T PF00702_consen 185 LRIIKELQVKPGEVAMVGDGVN 206 (215)
T ss_dssp HHHHHHHTCTGGGEEEEESSGG
T ss_pred HHHHHHHhcCCCEEEEEccCHH
Confidence 46677776 568999999983
No 39
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=27.24 E-value=40 Score=31.86 Aligned_cols=27 Identities=22% Similarity=0.346 Sum_probs=21.3
Q ss_pred HHcCCceEEeehhhhHHHHHHHHhhhcc
Q 041668 132 ILSGKRLMFIGDSIQRGQFESMVCMVQS 159 (238)
Q Consensus 132 ~lrgKrivFVGDSl~Rnq~~SL~ClL~~ 159 (238)
.++|++|+||||..+ |...|++.++..
T Consensus 152 ~l~g~~va~vGd~~~-~v~~Sl~~~~~~ 178 (331)
T PRK02102 152 PLKGLKLAYVGDGRN-NMANSLMVGGAK 178 (331)
T ss_pred CCCCCEEEEECCCcc-cHHHHHHHHHHH
Confidence 367899999999864 488888887653
No 40
>PF14647 FAM91_N: FAM91 N-terminus
Probab=27.17 E-value=58 Score=30.77 Aligned_cols=30 Identities=30% Similarity=0.455 Sum_probs=25.3
Q ss_pred CCCCChHHHHHHHcCCceEEeehhhhHHHHHHHHhhhccc
Q 041668 121 LPWFDPLKLLDILSGKRLMFIGDSIQRGQFESMVCMVQSV 160 (238)
Q Consensus 121 Lprfd~~~fl~~lrgKrivFVGDSl~Rnq~~SL~ClL~~~ 160 (238)
||.|+|+|.|+++. ++||||-.|+.-..+.
T Consensus 109 LPNFTAaD~LRllG----------IGRNqYIdlmn~~RS~ 138 (308)
T PF14647_consen 109 LPNFTAADCLRLLG----------IGRNQYIDLMNKCRSK 138 (308)
T ss_pred CCCCcHHHHHHHhc----------chHHHHHHHHHHhchh
Confidence 99999999998874 7899999998766553
No 41
>PLN02342 ornithine carbamoyltransferase
Probab=27.17 E-value=41 Score=32.03 Aligned_cols=26 Identities=19% Similarity=0.475 Sum_probs=21.3
Q ss_pred HHcCCceEEeehhhhHHHHHHHHhhhcc
Q 041668 132 ILSGKRLMFIGDSIQRGQFESMVCMVQS 159 (238)
Q Consensus 132 ~lrgKrivFVGDSl~Rnq~~SL~ClL~~ 159 (238)
.+.|++|+||||- .|...|++.++..
T Consensus 191 ~l~glkva~vGD~--~nva~Sli~~~~~ 216 (348)
T PLN02342 191 RLEGTKVVYVGDG--NNIVHSWLLLAAV 216 (348)
T ss_pred CcCCCEEEEECCC--chhHHHHHHHHHH
Confidence 4679999999994 3699999988764
No 42
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=27.13 E-value=60 Score=26.12 Aligned_cols=13 Identities=23% Similarity=0.692 Sum_probs=10.8
Q ss_pred CCceEEeehhhhH
Q 041668 135 GKRLMFIGDSIQR 147 (238)
Q Consensus 135 gKrivFVGDSl~R 147 (238)
.+.++|||||.+=
T Consensus 162 ~~~~i~iGD~~~D 174 (188)
T TIGR01489 162 YQHIIYIGDGVTD 174 (188)
T ss_pred CceEEEECCCcch
Confidence 5689999999864
No 43
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=27.02 E-value=29 Score=28.83 Aligned_cols=12 Identities=33% Similarity=0.858 Sum_probs=10.6
Q ss_pred ceEEeehhhhHH
Q 041668 137 RLMFIGDSIQRG 148 (238)
Q Consensus 137 rivFVGDSl~Rn 148 (238)
+|+|+|||++..
T Consensus 1 ~i~~~GDSit~G 12 (204)
T cd04506 1 KIVALGDSLTEG 12 (204)
T ss_pred CEeEEeccccCc
Confidence 489999999985
No 44
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=26.77 E-value=38 Score=31.47 Aligned_cols=28 Identities=18% Similarity=0.237 Sum_probs=21.7
Q ss_pred HHcCCceEEeehhhhHHHHHHHHhhhcc
Q 041668 132 ILSGKRLMFIGDSIQRGQFESMVCMVQS 159 (238)
Q Consensus 132 ~lrgKrivFVGDSl~Rnq~~SL~ClL~~ 159 (238)
.++|++|+||||-..-|...|++-++..
T Consensus 153 ~l~g~kv~~vGD~~~~~v~~Sl~~~~~~ 180 (305)
T PRK00856 153 RLEGLKVAIVGDIKHSRVARSNIQALTR 180 (305)
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHH
Confidence 4689999999997655777887776653
No 45
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=26.32 E-value=44 Score=31.62 Aligned_cols=21 Identities=29% Similarity=0.597 Sum_probs=18.4
Q ss_pred HcCCceEEeehhhhHHHHHHHHh
Q 041668 133 LSGKRLMFIGDSIQRGQFESMVC 155 (238)
Q Consensus 133 lrgKrivFVGDSl~Rnq~~SL~C 155 (238)
++|++++||||- -|+-.||+-
T Consensus 151 l~g~k~a~vGDg--NNv~nSl~~ 171 (310)
T COG0078 151 LKGLKLAYVGDG--NNVANSLLL 171 (310)
T ss_pred ccCcEEEEEcCc--chHHHHHHH
Confidence 689999999999 888888764
No 46
>PLN02527 aspartate carbamoyltransferase
Probab=25.49 E-value=44 Score=31.04 Aligned_cols=27 Identities=19% Similarity=0.363 Sum_probs=20.4
Q ss_pred HHcCCceEEeehhhhHHHHHHHHhhhc
Q 041668 132 ILSGKRLMFIGDSIQRGQFESMVCMVQ 158 (238)
Q Consensus 132 ~lrgKrivFVGDSl~Rnq~~SL~ClL~ 158 (238)
.++|++|+||||-.+-|...|++-++.
T Consensus 148 ~l~g~kva~vGD~~~~rv~~Sl~~~~~ 174 (306)
T PLN02527 148 RLDGIKVGLVGDLANGRTVRSLAYLLA 174 (306)
T ss_pred CcCCCEEEEECCCCCChhHHHHHHHHH
Confidence 367899999999865456777776654
No 47
>PRK13159 cytochrome c-type biogenesis protein CcmE; Reviewed
Probab=24.82 E-value=74 Score=27.15 Aligned_cols=18 Identities=33% Similarity=0.324 Sum_probs=9.7
Q ss_pred cchhhhHHHHHHHHHHHH
Q 041668 2 RRRTTVQSLITVATALLL 19 (238)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~ 19 (238)
+|++|+..|+.+++++.+
T Consensus 4 ~r~rRl~~v~~~~~~~~~ 21 (155)
T PRK13159 4 TRKQRLWLVIGVLTAAAL 21 (155)
T ss_pred hhhhHHHHHHHHHHHHHH
Confidence 567777655444443333
No 48
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional
Probab=24.70 E-value=44 Score=31.58 Aligned_cols=26 Identities=15% Similarity=0.192 Sum_probs=20.0
Q ss_pred HcCCceEEeehhhhHHHHHHHHhhhcc
Q 041668 133 LSGKRLMFIGDSIQRGQFESMVCMVQS 159 (238)
Q Consensus 133 lrgKrivFVGDSl~Rnq~~SL~ClL~~ 159 (238)
++|.+|+||||-.+ |...|++-++..
T Consensus 154 l~g~~ia~vGD~~~-~v~~Sl~~~~~~ 179 (336)
T PRK03515 154 FNEMTLAYAGDARN-NMGNSLLEAAAL 179 (336)
T ss_pred cCCCEEEEeCCCcC-cHHHHHHHHHHH
Confidence 56899999999434 588888877753
No 49
>PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised. All the members are 350-400 amino acids long.; PDB: 2QM3_A.
Probab=24.07 E-value=34 Score=31.27 Aligned_cols=12 Identities=58% Similarity=1.273 Sum_probs=8.7
Q ss_pred HcCCceEEeehh
Q 041668 133 LSGKRLMFIGDS 144 (238)
Q Consensus 133 lrgKrivFVGDS 144 (238)
|.||+|+||||=
T Consensus 43 L~gk~il~lGDD 54 (243)
T PF01861_consen 43 LEGKRILFLGDD 54 (243)
T ss_dssp STT-EEEEES-T
T ss_pred ccCCEEEEEcCC
Confidence 679999999994
No 50
>PRK13150 cytochrome c-type biogenesis protein CcmE; Reviewed
Probab=23.62 E-value=83 Score=26.95 Aligned_cols=26 Identities=19% Similarity=0.087 Sum_probs=12.7
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhhhhccc
Q 041668 2 RRRTTVQSLITVATALLLIVGTARSLLDN 30 (238)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 (238)
+|++|+..|+.++ +++..++.+++.+
T Consensus 4 ~r~rRl~~v~~~~---~~~~~a~~Lvl~a 29 (159)
T PRK13150 4 RRKNRLWVVCAVL---AGLGLTTALVLYA 29 (159)
T ss_pred hhhhHHHHHHHHH---HHHHHHHHHHHHH
Confidence 5677775544333 3333344444444
No 51
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=23.62 E-value=50 Score=31.08 Aligned_cols=26 Identities=23% Similarity=0.309 Sum_probs=20.2
Q ss_pred HcCCceEEeehhhhHHHHHHHHhhhcc
Q 041668 133 LSGKRLMFIGDSIQRGQFESMVCMVQS 159 (238)
Q Consensus 133 lrgKrivFVGDSl~Rnq~~SL~ClL~~ 159 (238)
+.|++|+||||-.+ |...|++.++..
T Consensus 154 l~gl~ia~vGD~~~-~v~~Sl~~~~~~ 179 (334)
T PRK01713 154 LSEISYVYIGDARN-NMGNSLLLIGAK 179 (334)
T ss_pred cCCcEEEEECCCcc-CHHHHHHHHHHH
Confidence 67899999999644 488888877653
No 52
>PRK10113 cell division modulator; Provisional
Probab=23.15 E-value=39 Score=25.38 Aligned_cols=18 Identities=39% Similarity=0.673 Sum_probs=13.5
Q ss_pred HHHcCCceEEe--ehhhhHH
Q 041668 131 DILSGKRLMFI--GDSIQRG 148 (238)
Q Consensus 131 ~~lrgKrivFV--GDSl~Rn 148 (238)
=.||||.++|| |||.-|.
T Consensus 37 W~LrGKYVAFvl~ge~FrRS 56 (80)
T PRK10113 37 WMLRGKYVAFVLMGESFLRS 56 (80)
T ss_pred heeccceEEEEEechhhccC
Confidence 35899999986 7776653
No 53
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=22.24 E-value=53 Score=31.04 Aligned_cols=26 Identities=15% Similarity=0.295 Sum_probs=20.0
Q ss_pred HcCCceEEeehhhhHHHHHHHHhhhc
Q 041668 133 LSGKRLMFIGDSIQRGQFESMVCMVQ 158 (238)
Q Consensus 133 lrgKrivFVGDSl~Rnq~~SL~ClL~ 158 (238)
++|++|+||||-..-|...|++.+|.
T Consensus 157 l~g~kia~vGD~~~~rv~~Sl~~~l~ 182 (338)
T PRK08192 157 IDGMHIAMVGDLKFGRTVHSLSRLLC 182 (338)
T ss_pred cCCCEEEEECcCCCCchHHHHHHHHH
Confidence 67899999999754567778776654
No 54
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=21.30 E-value=58 Score=30.22 Aligned_cols=29 Identities=17% Similarity=0.272 Sum_probs=21.8
Q ss_pred HHHcCCceEEeehhhhHHHHHHHHhhhcc
Q 041668 131 DILSGKRLMFIGDSIQRGQFESMVCMVQS 159 (238)
Q Consensus 131 ~~lrgKrivFVGDSl~Rnq~~SL~ClL~~ 159 (238)
..++|++|+||||-..-|...|++-++..
T Consensus 146 g~l~g~~va~vGD~~~~~v~~Sl~~~~a~ 174 (301)
T TIGR00670 146 GRLDGLKIALVGDLKYGRTVHSLAEALTR 174 (301)
T ss_pred CCCCCCEEEEEccCCCCcHHHHHHHHHHH
Confidence 34789999999997655777777776653
No 55
>PRK13165 cytochrome c-type biogenesis protein CcmE; Reviewed
Probab=20.37 E-value=1.1e+02 Score=26.16 Aligned_cols=12 Identities=25% Similarity=0.299 Sum_probs=6.4
Q ss_pred cchhhhHHHHHH
Q 041668 2 RRRTTVQSLITV 13 (238)
Q Consensus 2 ~~~~~~~~~~~~ 13 (238)
+|++|+..++.+
T Consensus 4 ~~~rRl~~~~~~ 15 (160)
T PRK13165 4 RRKKRLWLACAV 15 (160)
T ss_pred cchhhHHHHHHH
Confidence 566676544333
No 56
>PF07423 DUF1510: Protein of unknown function (DUF1510); InterPro: IPR009988 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown.
Probab=20.16 E-value=92 Score=27.92 Aligned_cols=33 Identities=15% Similarity=0.370 Sum_probs=18.6
Q ss_pred cCceeeeeCCCCCCCCCChHHHHHHHcCCc-eEEeehhhhHHHHHH
Q 041668 108 FHQKWRWQPDGCNLPWFDPLKLLDILSGKR-LMFIGDSIQRGQFES 152 (238)
Q Consensus 108 ~y~~WrWqP~gC~Lprfd~~~fl~~lrgKr-ivFVGDSl~Rnq~~S 152 (238)
.|.+=.|+|-|-.- .|.+ .-|=-+|.-++-|..
T Consensus 124 ~~t~~~W~pvgT~Q------------~g~h~~~y~~~S~DW~Em~~ 157 (217)
T PF07423_consen 124 TITNPSWKPVGTEQ------------TGEHVMTYDSGSVDWNEMLK 157 (217)
T ss_pred ceeccCcccccccc------------CCCccccccCCCcCHHHHHH
Confidence 35555799976542 3343 335556666665544
No 57
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=20.11 E-value=51 Score=32.86 Aligned_cols=33 Identities=30% Similarity=0.600 Sum_probs=26.6
Q ss_pred HHHHHHcCCceEEeehhhhHHH-HHHHHhhhccc
Q 041668 128 KLLDILSGKRLMFIGDSIQRGQ-FESMVCMVQSV 160 (238)
Q Consensus 128 ~fl~~lrgKrivFVGDSl~Rnq-~~SL~ClL~~~ 160 (238)
...+.++|||++.|=||+-|.- ..-++.||..+
T Consensus 341 pvr~~v~GKrVvlVDDSIVRGTTsr~IV~mlReA 374 (470)
T COG0034 341 PVREVVKGKRVVLVDDSIVRGTTSRRIVQMLREA 374 (470)
T ss_pred chHHHhCCCeEEEEccccccCccHHHHHHHHHHh
Confidence 4677888999999999999864 66677777743
No 58
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=20.11 E-value=67 Score=31.57 Aligned_cols=26 Identities=19% Similarity=0.388 Sum_probs=20.1
Q ss_pred HcCCceEEeehhhhHHHHHHHHhhhc
Q 041668 133 LSGKRLMFIGDSIQRGQFESMVCMVQ 158 (238)
Q Consensus 133 lrgKrivFVGDSl~Rnq~~SL~ClL~ 158 (238)
++|++|+||||-..-|...|++.++.
T Consensus 239 l~G~kIa~vGD~~~~rv~~Sl~~~la 264 (429)
T PRK11891 239 VDGAHIALVGDLKYGRTVHSLVKLLA 264 (429)
T ss_pred cCCCEEEEECcCCCChHHHHHHHHHH
Confidence 57899999999754567788777653
Done!