Query 041671
Match_columns 296
No_of_seqs 145 out of 940
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 16:09:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041671.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041671hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lmj_A Fibrillin 1; EGF, calci 97.6 1.6E-05 5.3E-10 59.4 1.1 37 247-286 12-50 (86)
2 1z6c_A Vitamin K-dependent pro 97.3 2.8E-05 9.7E-10 58.1 -0.1 36 248-286 13-49 (87)
3 2w2n_E LDL receptor, low-densi 97.1 8.7E-05 3E-09 57.8 0.6 34 252-287 41-74 (107)
4 2bou_A EGF-like module contain 97.1 0.00021 7.3E-09 57.9 2.4 43 247-294 8-56 (143)
5 2bou_A EGF-like module contain 96.9 0.00025 8.7E-09 57.5 1.7 45 247-294 54-107 (143)
6 1emn_A Fibrillin; extracellula 96.5 0.00065 2.2E-08 50.0 1.0 42 247-294 13-54 (82)
7 1gl4_A Nidogen-1, entactin; im 96.4 0.0011 3.9E-08 60.2 2.0 38 246-286 13-50 (285)
8 2jkh_L Factor X light chain; p 96.1 0.0019 6.4E-08 44.0 1.7 37 246-286 9-46 (55)
9 1x7a_L Coagulation factor IX, 96.1 0.0028 9.6E-08 51.8 2.8 37 246-287 54-90 (146)
10 2k2s_B Micronemal protein 6; m 95.7 0.0035 1.2E-07 43.8 1.7 37 247-288 18-57 (61)
11 1yo8_A Thrombospondin-2; EGF, 95.4 0.007 2.4E-07 60.9 3.2 45 247-294 53-113 (634)
12 2bz6_L Blood coagulation facto 95.2 0.0072 2.5E-07 40.8 1.8 33 253-286 12-45 (53)
13 1g1s_A P-selectin; selectin, l 95.2 0.0059 2E-07 50.0 1.6 36 247-287 126-161 (162)
14 2vj3_A Neurogenic locus notch 95.1 0.014 4.6E-07 46.7 3.3 43 246-294 89-132 (135)
15 1kig_L Factor XA; glycoprotein 94.9 0.0057 2E-07 41.0 0.6 31 253-285 11-42 (51)
16 1edm_B Factor IX; epidermal gr 94.7 0.022 7.4E-07 35.5 2.8 27 246-274 9-35 (39)
17 1hae_A Heregulin-alpha; growth 94.4 0.028 9.6E-07 39.0 3.2 37 247-286 13-53 (63)
18 2vj3_A Neurogenic locus notch 94.4 0.022 7.6E-07 45.4 3.0 35 247-286 14-49 (135)
19 2vh0_B Activated factor XA lig 94.2 0.0081 2.8E-07 48.2 -0.2 36 247-287 49-86 (134)
20 1uzk_A Fibrillin-1; glycoprote 94.2 0.019 6.5E-07 47.2 2.2 37 247-286 11-50 (162)
21 1yo8_A Thrombospondin-2; EGF, 94.2 0.023 8E-07 57.1 3.1 40 246-286 110-154 (634)
22 1aut_L Activated protein C; se 94.1 0.021 7.2E-07 44.3 2.1 35 247-286 21-58 (114)
23 1kli_L Factor VIIA; extrinsic 94.0 0.021 7.2E-07 40.7 1.8 33 253-286 18-51 (69)
24 1nfu_B Coagulation factor XA, 93.8 0.01 3.5E-07 51.1 -0.2 36 247-287 49-86 (195)
25 4d90_A EGF-like repeat and dis 93.7 0.037 1.3E-06 44.1 3.1 37 247-286 59-101 (143)
26 1dx5_I Thrombomodulin; serine 93.6 0.009 3.1E-07 46.8 -0.8 36 252-293 53-89 (118)
27 3u7u_G Neuregulin 1; signaling 93.5 0.037 1.3E-06 37.7 2.2 30 245-274 13-45 (55)
28 1tpg_A T-plasminogen activator 93.4 0.065 2.2E-06 39.9 3.8 35 247-284 55-90 (91)
29 1z1y_A Ookinete surface protei 93.3 0.013 4.3E-07 49.4 -0.5 39 247-286 98-143 (186)
30 1n7d_A LDL receptor, low-densi 93.1 0.051 1.8E-06 55.0 3.6 34 253-288 307-340 (699)
31 2c4f_L Coagulation factor VII 92.8 0.057 1.9E-06 43.6 2.8 34 247-285 54-88 (142)
32 1a3p_A Epidermal growth factor 92.8 0.063 2.1E-06 34.6 2.4 28 247-274 10-37 (45)
33 3m0c_C LDL receptor, low-densi 92.7 0.041 1.4E-06 56.7 2.3 34 253-288 325-358 (791)
34 1k36_A Epiregulin; EGF-like fo 92.6 0.075 2.6E-06 34.7 2.6 28 246-274 12-39 (46)
35 1egf_A Epidermal growth factor 92.3 0.098 3.4E-06 34.9 3.0 28 247-274 13-40 (53)
36 3cfw_A L-selectin; EGF, cell a 91.9 0.099 3.4E-06 42.5 3.2 35 247-286 126-160 (164)
37 1apq_A Complement protease C1R 91.9 0.072 2.5E-06 35.2 1.9 31 246-280 20-51 (53)
38 1emn_A Fibrillin; extracellula 91.5 0.13 4.3E-06 37.4 3.1 27 247-276 52-78 (82)
39 1z1y_A Ookinete surface protei 91.3 0.043 1.5E-06 46.0 0.4 38 246-286 54-95 (186)
40 1uzk_A Fibrillin-1; glycoprote 91.2 0.017 5.8E-07 47.5 -2.2 26 262-287 99-127 (162)
41 1nql_B Epidermal growth factor 91.1 0.14 4.8E-06 34.4 2.8 29 246-274 12-40 (53)
42 3h5c_B Vitamin K-dependent pro 91.1 0.16 5.4E-06 45.9 3.9 37 246-286 52-89 (317)
43 4d90_A EGF-like repeat and dis 89.4 0.26 8.9E-06 39.1 3.5 28 246-275 103-130 (143)
44 3ca7_A Protein spitz; argos, E 88.3 0.18 6.1E-06 33.5 1.5 28 247-274 15-44 (52)
45 1lmj_A Fibrillin 1; EGF, calci 87.9 0.35 1.2E-05 35.2 3.1 28 247-277 55-82 (86)
46 2wph_E Coagulation factor IXA 87.7 0.24 8.4E-06 33.9 1.9 31 253-284 12-43 (59)
47 3fby_A COMP, cartilage oligome 86.8 0.4 1.4E-05 47.0 3.6 51 223-277 6-57 (551)
48 2w86_A Fibrillin-1, fibrillin1 85.5 0.46 1.6E-05 38.0 2.8 26 247-275 116-141 (147)
49 3ltf_D Protein spitz; receptor 84.5 0.32 1.1E-05 33.2 1.1 28 247-274 15-44 (58)
50 1aut_L Activated protein C; se 84.3 0.39 1.3E-05 36.9 1.7 30 253-284 67-97 (114)
51 2w86_A Fibrillin-1, fibrillin1 83.4 0.41 1.4E-05 38.3 1.6 33 247-282 11-44 (147)
52 1tpg_A T-plasminogen activator 82.9 0.67 2.3E-05 34.3 2.5 21 261-286 30-52 (91)
53 2c4f_L Coagulation factor VII 81.4 0.54 1.8E-05 37.6 1.6 31 253-284 101-132 (142)
54 2kl7_A Fibulin-4; secreted, ca 80.6 0.7 2.4E-05 32.8 1.8 32 246-279 11-44 (71)
55 1x7a_L Coagulation factor IX, 79.9 0.43 1.5E-05 38.6 0.5 31 253-285 98-130 (146)
56 1dx5_I Thrombomodulin; serine 79.6 0.83 2.8E-05 35.3 2.0 26 247-276 88-113 (118)
57 2vh0_B Activated factor XA lig 77.5 0.87 3E-05 36.0 1.6 30 253-284 94-124 (134)
58 2vj2_A Jagged-1; signalling, p 77.2 1.6 5.4E-05 35.9 3.2 28 246-274 138-165 (169)
59 1z6c_A Vitamin K-dependent pro 76.9 1.5 5E-05 31.9 2.6 33 247-283 52-87 (87)
60 3e50_C Protransforming growth 76.6 1.5 5.2E-05 29.0 2.3 28 246-274 14-41 (50)
61 1ob1_C Major merozoite surface 72.6 1.3 4.3E-05 33.7 1.3 30 247-277 11-40 (99)
62 2w2n_E LDL receptor, low-densi 72.6 0.74 2.5E-05 35.1 0.0 24 252-277 80-103 (107)
63 1n1i_A Merozoite surface prote 72.0 2 6.9E-05 32.9 2.3 36 247-284 17-52 (105)
64 1g1t_A E-selectin; EGF, adhesi 68.2 1.6 5.6E-05 34.6 1.2 26 247-274 126-151 (157)
65 2rnl_A Amphiregulin; AR, color 66.3 4 0.00014 26.9 2.6 28 246-274 18-45 (50)
66 1nfu_B Coagulation factor XA, 66.1 2.5 8.5E-05 35.9 1.9 29 253-283 94-123 (195)
67 3m0c_C LDL receptor, low-densi 65.2 2 6.7E-05 44.2 1.3 31 253-285 364-395 (791)
68 3p5b_L Low density lipoprotein 64.9 2.6 8.9E-05 39.2 2.0 31 253-285 52-83 (400)
69 1xdt_R Hbegf, heparin-binding 64.8 2.4 8.2E-05 30.9 1.3 35 236-274 39-73 (79)
70 2vj2_A Jagged-1; signalling, p 64.1 1.6 5.5E-05 35.8 0.3 23 262-287 113-136 (169)
71 1szb_A Mannose binding lectin- 62.6 2.8 9.4E-05 34.1 1.5 32 247-282 136-168 (170)
72 3fcs_B Integrin beta-3; beta p 55.0 4.6 0.00016 40.9 1.9 30 263-295 545-577 (690)
73 1iox_A Betacellulin; EGF-like 53.4 7.1 0.00024 25.6 2.0 28 246-274 14-41 (50)
74 2fd6_A Urokinase-type plasmino 52.5 7.1 0.00024 30.3 2.3 26 248-273 3-29 (122)
75 1n7d_A LDL receptor, low-densi 40.3 12 0.0004 37.6 2.2 31 253-285 346-377 (699)
76 1nzi_A Complement C1S componen 38.6 14 0.00046 29.3 1.9 43 225-274 107-150 (159)
77 3v65_B Low-density lipoprotein 37.1 8.9 0.0003 35.2 0.6 34 247-284 52-86 (386)
78 3asi_A Neurexin-1-alpha; beta- 36.3 25 0.00084 32.5 3.6 28 245-274 190-218 (410)
79 4fbr_A Lectin, myxobacterial h 34.1 4.1 0.00014 36.4 -2.1 36 246-286 172-208 (267)
80 4fbr_A Lectin, myxobacterial h 33.7 3.5 0.00012 36.8 -2.6 44 228-274 21-64 (267)
81 3ssb_I IMPI alpha, inducible m 32.5 13 0.00046 22.0 0.7 20 265-285 7-27 (32)
82 3sov_A LRP-6, low-density lipo 31.0 31 0.0011 30.7 3.2 29 253-281 280-309 (318)
83 3rm2_L Thrombin light chain; s 28.5 21 0.00072 21.9 1.1 16 41-56 2-17 (36)
84 2i9a_A Urokinase-type plasmino 27.4 30 0.001 27.6 2.2 28 247-274 14-42 (145)
85 3fcs_B Integrin beta-3; beta p 20.7 33 0.0011 34.6 1.4 29 263-294 504-537 (690)
86 2p28_B Integrin beta-2; hybrid 20.3 40 0.0014 28.8 1.7 43 246-294 143-189 (217)
No 1
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.58 E-value=1.6e-05 Score=59.40 Aligned_cols=37 Identities=32% Similarity=0.944 Sum_probs=31.6
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCcc--CCccCcccc
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYL--GCVDIDECL 286 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYl--GC~didEC~ 286 (296)
.| .|..|++... +|+|.|.+||+++++. .|+|||||.
T Consensus 12 ~C-~~g~C~n~~g--~y~C~C~~Gy~~~~~~g~~C~dideC~ 50 (86)
T 1lmj_A 12 LC-GRGQCVNTPG--DFECKCDEGYESGFMMMKNCMDIDECQ 50 (86)
T ss_dssp TT-TTSCEEEETT--EEEECCCSSEEECTTTSSSEEECCHHH
T ss_pred CC-CCCEEECCCC--CEEeeCCCCcCccCCCCCccCCccccc
Confidence 47 4568988764 8999999999999886 899999995
No 2
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.34 E-value=2.8e-05 Score=58.13 Aligned_cols=36 Identities=33% Similarity=0.837 Sum_probs=31.6
Q ss_pred CCCCCceeecCCCCceeEeeCCCCcCCCcc-CCccCcccc
Q 041671 248 CGDNTNCYYSENGKGYRCKCKQGFQGNPYL-GCVDIDECL 286 (296)
Q Consensus 248 C~~nS~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~didEC~ 286 (296)
| .+..|++... +|+|.|.+||+++++. .|+|||||.
T Consensus 13 C-~~~~C~n~~g--~y~C~C~~G~~~~~~g~~C~dideC~ 49 (87)
T 1z6c_A 13 C-GTAVCKNIPG--DFECECPEGYRYNLKSKSCEDIDECS 49 (87)
T ss_dssp B-TTSSCCCBTT--BCCCSSSTTCEEETTTTEEECCCHHH
T ss_pred C-CCCEeECCCC--CEEEECCCCceECCCCCcCCCcCeeC
Confidence 7 6788887654 8999999999999987 899999995
No 3
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.13 E-value=8.7e-05 Score=57.85 Aligned_cols=34 Identities=44% Similarity=0.802 Sum_probs=22.1
Q ss_pred CceeecCCCCceeEeeCCCCcCCCccCCccCccccC
Q 041671 252 TNCYYSENGKGYRCKCKQGFQGNPYLGCVDIDECLD 287 (296)
Q Consensus 252 S~C~d~~~g~GY~C~C~~Gy~GNPYlGC~didEC~~ 287 (296)
..|++... +|+|.|.+||+|++-..|+|||||..
T Consensus 41 ~~C~n~~g--~y~C~C~~Gy~g~~g~~C~dideC~~ 74 (107)
T 2w2n_E 41 YVCNDLKI--GYECLCPDGFQLVAQRRCEDIDECQD 74 (107)
T ss_dssp SEEECCSB--SCEEECCTTCEEETTTEEEC------
T ss_pred CEeEeCCC--CeEEECCCCccccCCCccccccccCC
Confidence 36776543 89999999999975348999999964
No 4
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=97.07 E-value=0.00021 Score=57.91 Aligned_cols=43 Identities=30% Similarity=0.770 Sum_probs=32.5
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCcc------CCccCccccCCCCCCCC
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYL------GCVDIDECLDKEKYHCE 294 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYl------GC~didEC~~~~~~~C~ 294 (296)
.|..++.|++ .|+|.|.+||+|++++ .|+|||||.....++|.
T Consensus 8 ~C~~~~~C~~-----~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~ 56 (143)
T 2bou_A 8 WCPQDSSCVN-----ATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCG 56 (143)
T ss_dssp TCCTTEEESS-----SSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCC
T ss_pred cCCCCCEEcC-----CCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCC
Confidence 5778889975 4999999999998753 79999999765445674
No 5
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=96.94 E-value=0.00025 Score=57.46 Aligned_cols=45 Identities=31% Similarity=0.891 Sum_probs=35.6
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCc--------c-CCccCccccCCCCCCCC
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPY--------L-GCVDIDECLDKEKYHCE 294 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPY--------l-GC~didEC~~~~~~~C~ 294 (296)
.|..+..|++... +|+|.|.+||.|++. - .|+|||||.. ..++|.
T Consensus 54 ~C~~~~~C~n~~g--~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~-~~~~C~ 107 (143)
T 2bou_A 54 SCGKFSDCWNTEG--SYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSS-GQHQCD 107 (143)
T ss_dssp CCCTTEEEEECSS--CEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHH-TCCCCC
T ss_pred CCCCCCEEEcCCC--CeEeECCCCcccCcCccccccCCCCCcCCccCccC-cCCCCC
Confidence 6877889987654 899999999999975 2 7999999964 234564
No 6
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=96.49 E-value=0.00065 Score=50.02 Aligned_cols=42 Identities=33% Similarity=0.778 Sum_probs=30.6
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCccCCccCccccCCCCCCCC
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYLGCVDIDECLDKEKYHCE 294 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYlGC~didEC~~~~~~~C~ 294 (296)
.|. |..|++... +|+|.|.+||+|+.- .|+|||||..+ .+|.
T Consensus 13 ~C~-~g~C~n~~g--~y~C~C~~Gy~~~g~-~C~dideC~~~--~~C~ 54 (82)
T 1emn_A 13 VCK-HGQCINTDG--SYRCECPFGYILAGN-ECVDTDECSVG--NPCG 54 (82)
T ss_dssp SCS-SSEECCCSS--CCCEECCTTEEEETT-EEEECCGGGTC--CTTS
T ss_pred CcC-CCEEEecCC--CEEEECCCCeECCCC-ccCCcccccCC--CCCC
Confidence 463 578987543 899999999986221 79999999642 3563
No 7
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.37 E-value=0.0011 Score=60.20 Aligned_cols=38 Identities=24% Similarity=0.605 Sum_probs=32.9
Q ss_pred cCCCCCCceeecCCCCceeEeeCCCCcCCCccCCccCcccc
Q 041671 246 DGCGDNTNCYYSENGKGYRCKCKQGFQGNPYLGCVDIDECL 286 (296)
Q Consensus 246 yaC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYlGC~didEC~ 286 (296)
..|..|..|.|... +|+|+|++||.||.. .|.|+||..
T Consensus 13 ~~C~~~a~C~Nt~G--sy~C~C~~Gy~GnG~-~C~d~d~Pq 50 (285)
T 1gl4_A 13 HQCSVHAECRDYAT--GFCCRCVANYTGNGR-QCVAEGSPQ 50 (285)
T ss_dssp GGSCTTEEEEECSS--CEEEEECTTEEECSS-SEEETTCEE
T ss_pred CCCCCCCEeEcCCC--CeEEEcCCCCCCCCC-cCCCCCCCc
Confidence 57988899998664 899999999999987 799999863
No 8
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.14 E-value=0.0019 Score=44.02 Aligned_cols=37 Identities=19% Similarity=0.490 Sum_probs=28.5
Q ss_pred cCCCCCCceeecCCCCceeEeeCCCCcCCCcc-CCccCcccc
Q 041671 246 DGCGDNTNCYYSENGKGYRCKCKQGFQGNPYL-GCVDIDECL 286 (296)
Q Consensus 246 yaC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~didEC~ 286 (296)
..|. + .|+|... +|+|.|.+||+-.+-- -|+|||||.
T Consensus 9 ~~C~-~-~C~nt~G--sy~C~C~~Gy~L~~d~~~C~didec~ 46 (55)
T 2jkh_L 9 GDCD-Q-FCHEEQN--SVVCSCARGYTLADNGKACIPTGPYP 46 (55)
T ss_dssp GGCS-S-EEEEETT--EEEEECCTTEEECTTSSCEEESSSSC
T ss_pred CCcC-c-EeEcCCC--CeEEeCCCCCEECCCCCeeccCcccc
Confidence 3463 3 7888754 8999999999855544 799999994
No 9
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=96.08 E-value=0.0028 Score=51.84 Aligned_cols=37 Identities=30% Similarity=0.646 Sum_probs=30.8
Q ss_pred cCCCCCCceeecCCCCceeEeeCCCCcCCCccCCccCccccC
Q 041671 246 DGCGDNTNCYYSENGKGYRCKCKQGFQGNPYLGCVDIDECLD 287 (296)
Q Consensus 246 yaC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYlGC~didEC~~ 287 (296)
..|..+..|++... +|+|.|.+||.|. .|+++|||..
T Consensus 54 ~pC~n~g~C~~~~~--~y~C~C~~G~~G~---~C~~~deC~~ 90 (146)
T 1x7a_L 54 NPCLNGGLCKDDIN--SYECWCQVGFEGK---NCELDATCNI 90 (146)
T ss_dssp CSSCTTCEEEECSS--CEEEECCSSEEST---TTCEECCTTS
T ss_pred CCCCCCCEeECCCC--CEEEecCCCCcCC---cCCCCccccC
Confidence 35887789988754 8999999999985 7999999953
No 10
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=95.75 E-value=0.0035 Score=43.84 Aligned_cols=37 Identities=27% Similarity=0.760 Sum_probs=29.0
Q ss_pred CCCCC--CceeecCCCCceeEeeCCCCc-CCCccCCccCccccCC
Q 041671 247 GCGDN--TNCYYSENGKGYRCKCKQGFQ-GNPYLGCVDIDECLDK 288 (296)
Q Consensus 247 aC~~n--S~C~d~~~g~GY~C~C~~Gy~-GNPYlGC~didEC~~~ 288 (296)
-|.++ ..|++..+ +|+|.|.+||. |. -|++.+||...
T Consensus 18 PC~nga~gtC~~~~g--~y~C~C~~Gy~~G~---~C~~~~~C~~~ 57 (61)
T 2k2s_B 18 PCGPEAAGTCKETNS--GYICRCNQGYRISL---DGTGNVTCIVR 57 (61)
T ss_dssp SSCSSSCCEEEECSS--EEEEECCTTEEEEE---CSSSCEEEEES
T ss_pred CCcCCCccccccCCC--ceEeECCCCCccCC---CCCCCCEeccc
Confidence 47655 68987653 89999999998 85 58888899654
No 11
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=95.44 E-value=0.007 Score=60.91 Aligned_cols=45 Identities=24% Similarity=0.694 Sum_probs=35.6
Q ss_pred CCCCCC---ceeecCCCCceeEe-eCCCCcCCCcc------------CCccCccccCCCCCCCC
Q 041671 247 GCGDNT---NCYYSENGKGYRCK-CKQGFQGNPYL------------GCVDIDECLDKEKYHCE 294 (296)
Q Consensus 247 aC~~nS---~C~d~~~g~GY~C~-C~~Gy~GNPYl------------GC~didEC~~~~~~~C~ 294 (296)
.|..++ .|++... +|+|. |.+||.|+.+. .|++|+||.. ..++|.
T Consensus 53 ~C~~gg~~~~CvNt~g--sY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~-~~~pC~ 113 (634)
T 1yo8_A 53 ICFSTSKVPRCVNTQP--GFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKD-KTHNCH 113 (634)
T ss_dssp CSCCCSSSCCEEECSS--SEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTT-TCCCCC
T ss_pred cccCCccccceeeccC--ceecccCCCCcccCccccccccccccCCCcccccccccC-CCcccc
Confidence 487777 8987654 89999 99999999874 3999999964 236775
No 12
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=95.24 E-value=0.0072 Score=40.83 Aligned_cols=33 Identities=18% Similarity=0.359 Sum_probs=25.2
Q ss_pred ceeecCCCCceeEeeCCCCcCCCcc-CCccCcccc
Q 041671 253 NCYYSENGKGYRCKCKQGFQGNPYL-GCVDIDECL 286 (296)
Q Consensus 253 ~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~didEC~ 286 (296)
.|.+...+ +|+|.|.+||+=.+=- -|+|||||.
T Consensus 12 ~C~n~~gg-s~~C~C~~Gy~L~~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 12 YCSDHTGT-KRSCRCHEGYSLLADGVSCTPTVEYP 45 (53)
T ss_dssp EEEEETTT-EEEEECCTTEEECTTSSCEEECSSSC
T ss_pred EeEcCCCC-CEEeeCCCCCEECCCCCcccCCcccc
Confidence 58776542 5999999999844433 799999993
No 13
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.22 E-value=0.0059 Score=49.95 Aligned_cols=36 Identities=28% Similarity=0.710 Sum_probs=27.4
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCccCCccCccccC
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYLGCVDIDECLD 287 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYlGC~didEC~~ 287 (296)
.|..+..|.+..+ +|.|+|.+||+|+ -|++++||..
T Consensus 126 ~C~~~g~C~~~~~--~~~c~C~~g~~G~---~Ce~~~~c~~ 161 (162)
T 1g1s_A 126 SCSKQGECLETIG--NYTCSCYPGFYGP---ECEYVRDDDD 161 (162)
T ss_dssp GGGGSEEEEECSS--SEEEEECTTEEST---TSCEECC---
T ss_pred CCCCCCEEecCCC--CceEeCCCCCcCc---ccccCcccCC
Confidence 4666678887543 8999999999996 6999999953
No 14
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=95.07 E-value=0.014 Score=46.70 Aligned_cols=43 Identities=30% Similarity=0.662 Sum_probs=27.0
Q ss_pred cCCCCCCceeecCCCCceeEeeCCCCcCCCccCCc-cCccccCCCCCCCC
Q 041671 246 DGCGDNTNCYYSENGKGYRCKCKQGFQGNPYLGCV-DIDECLDKEKYHCE 294 (296)
Q Consensus 246 yaC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYlGC~-didEC~~~~~~~C~ 294 (296)
..|..+..|++... +|+|.|.+||.|. -|+ |||||.. ....|+
T Consensus 89 ~~C~~~g~C~~~~g--~~~C~C~~G~~G~---~C~~~i~~C~~-~~~~c~ 132 (135)
T 2vj3_A 89 SPCLHNGRCLDKIN--EFQCECPTGFTGH---LCQVDLHHILD-AQKMVW 132 (135)
T ss_dssp CCSTTTCEEEECSS--CEEEECCTTEESS---SSCEECC-----------
T ss_pred CCcCCCCEeECCCC--CeEEECCCCCcCC---ccCccCccccC-CCccee
Confidence 35877789987653 8999999999985 685 9999954 334553
No 15
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=94.94 E-value=0.0057 Score=40.97 Aligned_cols=31 Identities=23% Similarity=0.540 Sum_probs=24.2
Q ss_pred ceeecCCCCceeEeeCCCCcCCCcc-CCccCccc
Q 041671 253 NCYYSENGKGYRCKCKQGFQGNPYL-GCVDIDEC 285 (296)
Q Consensus 253 ~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~didEC 285 (296)
.|++... +|+|.|.+||+=.+=- -|+|||||
T Consensus 11 ~C~n~~g--s~~C~C~~Gy~L~~d~~tC~dide~ 42 (51)
T 1kig_L 11 FCREERS--EVRCSCAHGYVLGDDSKSCVSTERF 42 (51)
T ss_dssp CCCEETT--EECCCCCTTEEECTTSSCEEECSSS
T ss_pred EeEcCCC--CeEEeCCCCcEECCCCCccccCCcc
Confidence 5877653 8999999999843333 79999998
No 16
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=94.68 E-value=0.022 Score=35.50 Aligned_cols=27 Identities=33% Similarity=0.813 Sum_probs=22.1
Q ss_pred cCCCCCCceeecCCCCceeEeeCCCCcCC
Q 041671 246 DGCGDNTNCYYSENGKGYRCKCKQGFQGN 274 (296)
Q Consensus 246 yaC~~nS~C~d~~~g~GY~C~C~~Gy~GN 274 (296)
.-|.++..|++... +|+|.|..||.|.
T Consensus 9 ~pC~ngg~C~~~~~--~~~C~C~~G~~G~ 35 (39)
T 1edm_B 9 NPCLNGGSCKDDIN--SYECWCPFGFEGK 35 (39)
T ss_dssp CCCCTTCEEEEETT--EEEEECCTTCCST
T ss_pred CCCCCCCEeEcCCC--ceEeECCCCCcCC
Confidence 35877789987643 8999999999985
No 17
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=94.41 E-value=0.028 Score=39.01 Aligned_cols=37 Identities=30% Similarity=0.787 Sum_probs=28.6
Q ss_pred CCCCCCceeec---CCCCceeEeeCCCCcCCCccCCc-cCcccc
Q 041671 247 GCGDNTNCYYS---ENGKGYRCKCKQGFQGNPYLGCV-DIDECL 286 (296)
Q Consensus 247 aC~~nS~C~d~---~~g~GY~C~C~~Gy~GNPYlGC~-didEC~ 286 (296)
-|.++..|++. ....+|+|.|.+||.|. -|+ +||+|.
T Consensus 13 pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~---~Ce~~i~~~~ 53 (63)
T 1hae_A 13 FCVNGGECFMVKDLSNPSRYLCKCQPGFTGA---RCTENVPMKV 53 (63)
T ss_dssp TSCTTCEEEEEESSSSSCCEEEECCTTEEST---TSCEECCSSC
T ss_pred cCCCCcEEecCCccCCCCCEEEECCCCCcCC---ccCcCcCccc
Confidence 58777899863 12348999999999986 585 899984
No 18
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=94.40 E-value=0.022 Score=45.43 Aligned_cols=35 Identities=31% Similarity=0.964 Sum_probs=22.2
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCccCCc-cCcccc
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYLGCV-DIDECL 286 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYlGC~-didEC~ 286 (296)
.|..+..|++... +|+|.|.+||.|+ .|+ |||||.
T Consensus 14 ~C~~~g~C~~~~g--~~~C~C~~Gy~G~---~C~~~~~~C~ 49 (135)
T 2vj3_A 14 PCEHAGKCINTLG--SFECQCLQGYTGP---RCEIDVNECV 49 (135)
T ss_dssp SSSTTCEEEECSS--SEEEECCTTEEST---TSCEECCTTT
T ss_pred CCCCCCEeECCCC--CEEEECCCCCcCC---cccccCccCC
Confidence 4666667765542 5777777777765 453 677774
No 19
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=94.16 E-value=0.0081 Score=48.22 Aligned_cols=36 Identities=28% Similarity=0.711 Sum_probs=3.7
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCccCCcc-C-ccccC
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYLGCVD-I-DECLD 287 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYlGC~d-i-dEC~~ 287 (296)
.|..+..|++... +|+|.|.+||.|. .|++ | |||..
T Consensus 49 pC~n~g~C~~~~~--~y~C~C~~G~~G~---~C~~~i~d~C~~ 86 (134)
T 2vh0_B 49 PCQNQGKCKDGLG--EYTCTCLEGFEGK---NCELFTRKLCSL 86 (134)
T ss_dssp -------------------------------------CCGGGT
T ss_pred CCCCcCCcccCCC--CEEeeCCCCccCC---ccccCCCCcccc
Confidence 4777788977643 8999999999986 6988 7 89954
No 20
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=94.16 E-value=0.019 Score=47.18 Aligned_cols=37 Identities=38% Similarity=0.874 Sum_probs=30.9
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCcc-CCccCcc--cc
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYL-GCVDIDE--CL 286 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~didE--C~ 286 (296)
.|. |..|+|... +|+|.|.+||+++|=- -|+|||| |.
T Consensus 11 ~C~-~~~C~n~~g--sy~C~C~~Gy~~~~~g~~C~d~~~~~C~ 50 (162)
T 1uzk_A 11 TCI-SGNCVNTPG--SYICDCPPDFELNPTRVGCVDTRSGNCY 50 (162)
T ss_dssp SSB-TSEEEEETT--EEEEECCTTCEECTTSSBEECCCCEEEE
T ss_pred CCC-CCEeECCCC--CEEEeCCCCCeECCCCCcccCCCCCccc
Confidence 574 789988764 8999999999998754 8999998 85
No 21
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=94.15 E-value=0.023 Score=57.10 Aligned_cols=40 Identities=28% Similarity=0.841 Sum_probs=32.0
Q ss_pred cCCCCCCceeecCC--CCceeEeeCCCCcCCCccCCc---cCcccc
Q 041671 246 DGCGDNTNCYYSEN--GKGYRCKCKQGFQGNPYLGCV---DIDECL 286 (296)
Q Consensus 246 yaC~~nS~C~d~~~--g~GY~C~C~~Gy~GNPYlGC~---didEC~ 286 (296)
..|..+..|++... ..+|+|.|.+||.||... |+ |||||.
T Consensus 110 ~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~-Ce~d~DiDeC~ 154 (634)
T 1yo8_A 110 HNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLI-CGEDSDLDGWP 154 (634)
T ss_dssp CCCCTTEEEEECCTTCSSSEEEEECTTEEESSSS-EEECTTSSSSC
T ss_pred cccccCccccccccccccceeeeccCCccccCcc-cccccCccccc
Confidence 46888899998761 138999999999999774 54 999995
No 22
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=94.07 E-value=0.021 Score=44.32 Aligned_cols=35 Identities=23% Similarity=0.672 Sum_probs=27.5
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCccCCccC---cccc
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYLGCVDI---DECL 286 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYlGC~di---dEC~ 286 (296)
.|..+..|++... +|+|.|.+||+|+ .|+++ |||.
T Consensus 21 ~C~~~g~C~~~~~--~y~C~C~~G~~G~---~C~~~~~~~~C~ 58 (114)
T 1aut_L 21 LCCGHGTCIDGIG--SFSCDCRSGWEGR---FCQREVSFLNCS 58 (114)
T ss_dssp TTTTSEEECCCSS--CCCEEECTTEEST---TSCEECCSSSSS
T ss_pred cCCCcCCCCCCCC--CcEeeCCCCCcCC---CcCcCCcCCcCc
Confidence 4777889987643 8999999999998 48875 4685
No 23
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=93.98 E-value=0.021 Score=40.74 Aligned_cols=33 Identities=18% Similarity=0.359 Sum_probs=25.6
Q ss_pred ceeecCCCCceeEeeCCCCcCCCcc-CCccCcccc
Q 041671 253 NCYYSENGKGYRCKCKQGFQGNPYL-GCVDIDECL 286 (296)
Q Consensus 253 ~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~didEC~ 286 (296)
.|.+...+ +|+|.|..||+=.+=- -|+|||||.
T Consensus 18 ~C~n~~g~-s~~C~C~~Gy~L~~D~~tC~d~dec~ 51 (69)
T 1kli_L 18 YCSDHTGT-KRSCRCHEGYSLLADGVSCTPTVEYP 51 (69)
T ss_dssp EEEEETTT-EEEEECCTTEEECTTSSCEEECSSSC
T ss_pred EeEcCCCC-CEEEeCCCCCeECCCCCcccCccccc
Confidence 57776542 6999999999855444 899999994
No 24
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=93.84 E-value=0.01 Score=51.07 Aligned_cols=36 Identities=28% Similarity=0.711 Sum_probs=3.8
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCccCCcc-C-ccccC
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYLGCVD-I-DECLD 287 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYlGC~d-i-dEC~~ 287 (296)
-|..+..|++... +|+|.|.+||.|. .|++ | |||..
T Consensus 49 pC~ngg~C~n~~g--~y~C~C~~Gf~G~---~Ce~~i~deC~~ 86 (195)
T 1nfu_B 49 PCQNQGKCKDGLG--EYTCTCLEGFEGK---NCELFTRKLCSL 86 (195)
T ss_dssp -------------------------------------CCGGGT
T ss_pred CCCCCCEeECCCC--CeeEeCCCCceec---cccccccccccC
Confidence 4877788987643 8999999999986 5987 6 89964
No 25
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=93.74 E-value=0.037 Score=44.14 Aligned_cols=37 Identities=43% Similarity=0.934 Sum_probs=28.3
Q ss_pred CCCCCCceeecCC-----CCceeEeeCCCCcCCCccCCc-cCcccc
Q 041671 247 GCGDNTNCYYSEN-----GKGYRCKCKQGFQGNPYLGCV-DIDECL 286 (296)
Q Consensus 247 aC~~nS~C~d~~~-----g~GY~C~C~~Gy~GNPYlGC~-didEC~ 286 (296)
.|..+..|+.... ..+|+|.|.+||+|. .|+ |||||.
T Consensus 59 ~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~---~C~~~i~~C~ 101 (143)
T 4d90_A 59 PCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGI---HCQHNINECE 101 (143)
T ss_dssp CCCTTCEEEECCCEETTEECCEEEECCTTEEST---TSCEECCTTT
T ss_pred CCCCCCEecCCCccccCCCCCeEeECcCCCcCC---CcccCCCcCC
Confidence 4777788874331 138999999999875 697 999995
No 26
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=93.61 E-value=0.009 Score=46.80 Aligned_cols=36 Identities=31% Similarity=0.695 Sum_probs=28.0
Q ss_pred CceeecCCCCceeEeeCCCCcCCCcc-CCccCccccCCCCCCC
Q 041671 252 TNCYYSENGKGYRCKCKQGFQGNPYL-GCVDIDECLDKEKYHC 293 (296)
Q Consensus 252 S~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~didEC~~~~~~~C 293 (296)
..|.+ . .+|+|.|.+||++++ - .|+|||||..+ .+|
T Consensus 53 ~~C~~-~--~~y~C~C~~Gy~~~~-g~~C~dideC~~~--~~C 89 (118)
T 1dx5_I 53 ADCDP-N--TQASCECPEGYILDD-GFICTDIDECENG--GFC 89 (118)
T ss_dssp CEECT-T--STTCEECCTTEEEET-TTEEEECCHHHHC--SSC
T ss_pred CcccC-C--CCeEeECCCCccCCC-CCccccccccCCC--CCC
Confidence 46765 2 389999999999887 4 79999999652 456
No 27
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=93.50 E-value=0.037 Score=37.75 Aligned_cols=30 Identities=30% Similarity=0.761 Sum_probs=22.7
Q ss_pred CcCCCCCCceeecC---CCCceeEeeCCCCcCC
Q 041671 245 VDGCGDNTNCYYSE---NGKGYRCKCKQGFQGN 274 (296)
Q Consensus 245 ~yaC~~nS~C~d~~---~g~GY~C~C~~Gy~GN 274 (296)
+.-|.+...|++.. ...+|+|.|.+||.|-
T Consensus 13 s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~ 45 (55)
T 3u7u_G 13 KTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGD 45 (55)
T ss_dssp TTTSCTTCEEEEECCC--CCCEEEEECTTEEST
T ss_pred CCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCC
Confidence 45698889996532 2348999999999985
No 28
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=93.42 E-value=0.065 Score=39.92 Aligned_cols=35 Identities=26% Similarity=0.673 Sum_probs=27.3
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCccCCc-cCcc
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYLGCV-DIDE 284 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYlGC~-didE 284 (296)
.|.++..|++.....+|+|.|.+||.|. -|+ ||||
T Consensus 55 pC~ngg~C~~~~~~~~~~C~C~~G~~G~---~Ce~~ide 90 (91)
T 1tpg_A 55 RCFNGGTCQQALYFSDFVCQCPEGFAGK---SCEIDTRA 90 (91)
T ss_dssp CSCTTCEEEEESSSSCEEEECCTTCBSS---SCCBCSSC
T ss_pred CCCCCCEeecCCCCCCeEeECCCCCcCC---cCCcCCCC
Confidence 4877789988763348999999999985 575 7776
No 29
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=93.26 E-value=0.013 Score=49.36 Aligned_cols=39 Identities=31% Similarity=0.689 Sum_probs=30.3
Q ss_pred CCCCCCceee---cCCCCceeEeeCCCCcCCCcc--CCccC--cccc
Q 041671 247 GCGDNTNCYY---SENGKGYRCKCKQGFQGNPYL--GCVDI--DECL 286 (296)
Q Consensus 247 aC~~nS~C~d---~~~g~GY~C~C~~Gy~GNPYl--GC~di--dEC~ 286 (296)
.|..+..|+. .+.+ +|+|.|.+||.|++.. .|++| |||.
T Consensus 98 ~C~~~g~C~~~~~~~~g-~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~ 143 (186)
T 1z1y_A 98 NCGESGECIVEYLSEIQ-SAGCSCAIGXVPNPEDEXXCTXTGETACQ 143 (186)
T ss_dssp CCCTTEEEEEEEETTEE-EEEEEECTEEEEETTTTTEEEEEECCCCC
T ss_pred CCCCCCEEeeCCcCCCC-CceEECCCCCcccCCCCCcceEcCCCccc
Confidence 4877888973 1222 8999999999998855 79987 8996
No 30
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.08 E-value=0.051 Score=55.00 Aligned_cols=34 Identities=44% Similarity=0.814 Sum_probs=25.5
Q ss_pred ceeecCCCCceeEeeCCCCcCCCccCCccCccccCC
Q 041671 253 NCYYSENGKGYRCKCKQGFQGNPYLGCVDIDECLDK 288 (296)
Q Consensus 253 ~C~d~~~g~GY~C~C~~Gy~GNPYlGC~didEC~~~ 288 (296)
.|.+... +|+|.|.+||+++.-..|+|||||..+
T Consensus 307 ~C~~~~~--~~~C~C~~G~~~~~~~~C~dideC~~~ 340 (699)
T 1n7d_A 307 VCNDLKI--GYECLCPDGFQLVAQRRCEDIDECQDP 340 (699)
T ss_dssp TCCCCTT--CCCCCCCSSSCCCSSSCCCCCCCCSSS
T ss_pred CcccCCC--CcEEeCCCCeEcCCCCcccCccccCCC
Confidence 5655432 899999999998332389999999643
No 31
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=92.82 E-value=0.057 Score=43.55 Aligned_cols=34 Identities=26% Similarity=0.669 Sum_probs=27.7
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCccCCcc-Cccc
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYLGCVD-IDEC 285 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYlGC~d-idEC 285 (296)
-|..+..|++... +|+|.|.+||+|. .|++ |++|
T Consensus 54 pC~n~g~C~~~~g--~y~C~C~~G~~G~---~C~~~~~~c 88 (142)
T 2c4f_L 54 PCQNGGSCKDQLQ--SYICFCLPAFEGR---NCETHKDDQ 88 (142)
T ss_dssp CCCTTCEEEEETT--EEEEECCTTEEST---TSCEEGGGC
T ss_pred CcCCCCEEeCCCC--CEEeeCCCCccCC---ccccCcccc
Confidence 5877789988754 8999999999986 4886 6775
No 32
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=92.75 E-value=0.063 Score=34.61 Aligned_cols=28 Identities=25% Similarity=0.566 Sum_probs=21.3
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCC
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGN 274 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GN 274 (296)
-|.++..|+......+|+|.|.+||.|.
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~ 37 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGD 37 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETT
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCC
Confidence 5877788974333348999999999985
No 33
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=92.75 E-value=0.041 Score=56.70 Aligned_cols=34 Identities=44% Similarity=0.814 Sum_probs=25.4
Q ss_pred ceeecCCCCceeEeeCCCCcCCCccCCccCccccCC
Q 041671 253 NCYYSENGKGYRCKCKQGFQGNPYLGCVDIDECLDK 288 (296)
Q Consensus 253 ~C~d~~~g~GY~C~C~~Gy~GNPYlGC~didEC~~~ 288 (296)
.|.+... ||+|.|.+||++..-..|+|||||..+
T Consensus 325 ~C~~~~~--~y~C~C~~Gy~l~~g~~C~dideC~~~ 358 (791)
T 3m0c_C 325 VCNDLKI--GYECLCPDGFQLVAQRRCEDIDECQDP 358 (791)
T ss_dssp EEEECSB--SEEEECCTTCEEETTTEEECCCCCSSS
T ss_pred cccCCCC--CcccCCCCCCccCCCCccccCcccCCC
Confidence 5766543 899999999997111179999999743
No 34
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=92.60 E-value=0.075 Score=34.65 Aligned_cols=28 Identities=25% Similarity=0.642 Sum_probs=21.6
Q ss_pred cCCCCCCceeecCCCCceeEeeCCCCcCC
Q 041671 246 DGCGDNTNCYYSENGKGYRCKCKQGFQGN 274 (296)
Q Consensus 246 yaC~~nS~C~d~~~g~GY~C~C~~Gy~GN 274 (296)
.-|.+ -.|.+.....+|.|+|.+||.|.
T Consensus 12 ~pC~n-G~C~~~~~~~~~~C~C~~GytG~ 39 (46)
T 1k36_A 12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGV 39 (46)
T ss_dssp SSCSS-EEEEEETTTTEEEEEECTTCSST
T ss_pred CCCCC-CEeeccCCCCCEEEECCCCCccC
Confidence 35755 68987654458999999999984
No 35
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=92.33 E-value=0.098 Score=34.95 Aligned_cols=28 Identities=29% Similarity=0.705 Sum_probs=21.4
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCC
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGN 274 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GN 274 (296)
-|.+...|+......+|+|.|.+||.|.
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~ 40 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYSGD 40 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCCSS
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCcCC
Confidence 5877789984323338999999999985
No 36
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=91.89 E-value=0.099 Score=42.54 Aligned_cols=35 Identities=26% Similarity=0.648 Sum_probs=26.4
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCccCCccCcccc
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYLGCVDIDECL 286 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYlGC~didEC~ 286 (296)
.|..+..|.+... +|.|.|.+||.|+ .|.++.||.
T Consensus 126 ~C~~~g~C~~~~~--~~~c~C~~g~~g~---~C~~~~~c~ 160 (164)
T 3cfw_A 126 SCSGHGECVEIIN--NYTCNCDVGYYGP---QCQFVQVDP 160 (164)
T ss_dssp SSCSSEEEEEETT--EEEEEECTTCBSS---SSCBC----
T ss_pred cCCCCCeecccCC--CceeeeCCCcccc---cccccccCc
Confidence 5777888887644 8999999999998 799999995
No 37
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=91.89 E-value=0.072 Score=35.17 Aligned_cols=31 Identities=26% Similarity=0.660 Sum_probs=23.4
Q ss_pred cCCCCCCceeecCCCCceeEeeCCCCcCCCcc-CCc
Q 041671 246 DGCGDNTNCYYSENGKGYRCKCKQGFQGNPYL-GCV 280 (296)
Q Consensus 246 yaC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~ 280 (296)
..|. ..|+|... +|+|.|.+||.+++-- .|+
T Consensus 20 ~~C~--~~C~n~~G--sy~C~C~~Gy~~~~d~~~C~ 51 (53)
T 1apq_A 20 PQCQ--HLCHNYVG--GYFCSCRPGYELQEDRHSCQ 51 (53)
T ss_dssp CTTS--SEEEEETT--EEEEECSTTCEECTTSSCEE
T ss_pred CCCC--CEeECCCC--CeEEECCCCCeECCCCCccC
Confidence 4574 37988764 8999999999987744 554
No 38
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=91.50 E-value=0.13 Score=37.42 Aligned_cols=27 Identities=37% Similarity=1.036 Sum_probs=22.0
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCc
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPY 276 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPY 276 (296)
.|. |..|++... +|+|.|.+||.|++.
T Consensus 52 ~C~-~~~C~n~~g--~y~C~C~~G~~g~~~ 78 (82)
T 1emn_A 52 PCG-NGTCKNVIG--GFECTCEEGFEPGPM 78 (82)
T ss_dssp TTS-SSCEEECSS--SEEECCSSSSCCCSS
T ss_pred CCC-CCEeECCCC--CEEeECCCCeEeCCC
Confidence 564 468988654 899999999999985
No 39
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=91.32 E-value=0.043 Score=46.05 Aligned_cols=38 Identities=29% Similarity=0.771 Sum_probs=30.0
Q ss_pred cCCCCCCceeecCC----CCceeEeeCCCCcCCCccCCccCcccc
Q 041671 246 DGCGDNTNCYYSEN----GKGYRCKCKQGFQGNPYLGCVDIDECL 286 (296)
Q Consensus 246 yaC~~nS~C~d~~~----g~GY~C~C~~Gy~GNPYlGC~didEC~ 286 (296)
..|..+..|++... + +|+|.|.+||+|+.. -|+ ||||.
T Consensus 54 ~~C~~~~~C~~~~~~~~~g-~y~C~C~~G~~g~~~-~C~-~d~C~ 95 (186)
T 1z1y_A 54 XACGEFGQCIENPDPAQVN-MYXCGCIEGYTLXED-TCV-LDVCQ 95 (186)
T ss_dssp SEEETTEEEEECSSTTSSC-SEEEEECTTEEEETT-EEE-EGGGT
T ss_pred CCCCCCCEeecCCCCcCCC-CEECCCCCCCccCCC-CCC-CCcCc
Confidence 45877789988763 3 899999999999875 455 79995
No 40
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=91.22 E-value=0.017 Score=47.51 Aligned_cols=26 Identities=42% Similarity=0.782 Sum_probs=23.3
Q ss_pred ceeEeeCC--CCcCCCcc-CCccCccccC
Q 041671 262 GYRCKCKQ--GFQGNPYL-GCVDIDECLD 287 (296)
Q Consensus 262 GY~C~C~~--Gy~GNPYl-GC~didEC~~ 287 (296)
+|+|.|.. ||+|++.. -|+|||||..
T Consensus 99 ~y~C~C~~g~G~~~~~~~~~c~dideC~~ 127 (162)
T 1uzk_A 99 EYKILCPGGEGFRPNPITVILEDIDECQE 127 (162)
T ss_dssp HHHHHCTTCTTEEECTTTCCEEECCHHHH
T ss_pred CceeECCCCCCcccCCCCCccCccccccC
Confidence 79999988 99999987 8999999963
No 41
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=91.14 E-value=0.14 Score=34.38 Aligned_cols=29 Identities=31% Similarity=0.726 Sum_probs=21.6
Q ss_pred cCCCCCCceeecCCCCceeEeeCCCCcCC
Q 041671 246 DGCGDNTNCYYSENGKGYRCKCKQGFQGN 274 (296)
Q Consensus 246 yaC~~nS~C~d~~~g~GY~C~C~~Gy~GN 274 (296)
.-|.+..+|.......+|+|.|.+||.|.
T Consensus 12 ~pC~nGG~C~~~~~~~~~~C~C~~GytG~ 40 (53)
T 1nql_B 12 GYCLHDGVCMYIEALDKYACNCVVGYIGE 40 (53)
T ss_dssp CEECTTCEEEEETTTTEEEEEECTTEEST
T ss_pred CCCCCCeEEeeecCCCCEEEecCCCCcCC
Confidence 35776688974333348999999999985
No 42
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=91.06 E-value=0.16 Score=45.95 Aligned_cols=37 Identities=35% Similarity=0.868 Sum_probs=30.0
Q ss_pred cCCCCCCceeecCCCCceeEeeCCCCcCCCcc-CCccCcccc
Q 041671 246 DGCGDNTNCYYSENGKGYRCKCKQGFQGNPYL-GCVDIDECL 286 (296)
Q Consensus 246 yaC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~didEC~ 286 (296)
..|. | .|.+... +|+|.|.+||.|++-. -|++++||.
T Consensus 52 ~~C~-~-~C~~~~g--~~~C~C~~g~~~~~~~~~C~~~~~c~ 89 (317)
T 3h5c_B 52 DGCQ-H-FCLPGQE--SYTCSCAQGYRLGEDHKQCVPHDQCA 89 (317)
T ss_dssp TSCS-S-EEECCSS--SCEEECCTTEECCTTSSCCEECSSCC
T ss_pred CCCc-C-ccccCCC--eeEEeccccccccccccccccccccc
Confidence 3563 3 7877543 8999999999999877 999999994
No 43
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=89.38 E-value=0.26 Score=39.06 Aligned_cols=28 Identities=25% Similarity=0.649 Sum_probs=23.0
Q ss_pred cCCCCCCceeecCCCCceeEeeCCCCcCCC
Q 041671 246 DGCGDNTNCYYSENGKGYRCKCKQGFQGNP 275 (296)
Q Consensus 246 yaC~~nS~C~d~~~g~GY~C~C~~Gy~GNP 275 (296)
..|..+..|++... +|+|.|.+||.|.-
T Consensus 103 ~~C~~~~~C~~~~g--~~~C~C~~G~~G~~ 130 (143)
T 4d90_A 103 EPCKNGGICTDLVA--NYSCECPGEFMGRN 130 (143)
T ss_dssp CCSCTTCEEEEETT--EEEEECCTTCBSTT
T ss_pred CCCCCCCEeECCCC--CeEeECCCCCccCC
Confidence 35878889987643 89999999999973
No 44
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=88.32 E-value=0.18 Score=33.52 Aligned_cols=28 Identities=29% Similarity=0.800 Sum_probs=21.3
Q ss_pred CCCCCCceeecC--CCCceeEeeCCCCcCC
Q 041671 247 GCGDNTNCYYSE--NGKGYRCKCKQGFQGN 274 (296)
Q Consensus 247 aC~~nS~C~d~~--~g~GY~C~C~~Gy~GN 274 (296)
-|.+...|++.. ...+|+|.|.+||.|.
T Consensus 15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~ 44 (52)
T 3ca7_A 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQ 44 (52)
T ss_dssp TSCTTCEEEEEEETTEEEEEEECCTTEEST
T ss_pred cCCCCCEEecCccCCCCCEEEECCCCCcCC
Confidence 577778898642 2248999999999995
No 45
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=87.94 E-value=0.35 Score=35.21 Aligned_cols=28 Identities=36% Similarity=0.813 Sum_probs=22.3
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCcc
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYL 277 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYl 277 (296)
.| .+..|++... +|+|.|.+||+|++-.
T Consensus 55 ~C-~~~~C~n~~g--~y~C~C~~G~~~~~~~ 82 (86)
T 1lmj_A 55 LC-RGGVCHNTEG--SYRCECPPGHQLSPNI 82 (86)
T ss_dssp TT-TTSEEEEETT--EEEEESCTTSCCCSSS
T ss_pred cC-CCCEeEcCCC--CEEEECcCCcccCCCC
Confidence 35 3678988754 8999999999998753
No 46
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=87.70 E-value=0.24 Score=33.90 Aligned_cols=31 Identities=19% Similarity=0.437 Sum_probs=23.0
Q ss_pred ceeecCCCCceeEeeCCCCcCCCcc-CCccCcc
Q 041671 253 NCYYSENGKGYRCKCKQGFQGNPYL-GCVDIDE 284 (296)
Q Consensus 253 ~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~didE 284 (296)
.|.+...| +|+|.|.+||+=.+=- -|+|++|
T Consensus 12 ~C~n~~~g-s~~C~C~~Gy~L~~D~~tC~d~~~ 43 (59)
T 2wph_E 12 FCKNSADN-KVVCSCTEGYRLAENQKSCEPAVP 43 (59)
T ss_dssp EEEECSTT-CEEEECCTTEEECTTSSCEEESSS
T ss_pred EeEeCCCC-CEEeeCCCCcEECCCCCcccCCCC
Confidence 58776644 8999999999844433 7888875
No 47
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=86.80 E-value=0.4 Score=47.05 Aligned_cols=51 Identities=24% Similarity=0.637 Sum_probs=32.4
Q ss_pred CCcEEEEEEEe-cCCCCCCCCCCCcCCCCCCceeecCCCCceeEeeCCCCcCCCcc
Q 041671 223 SSNVTIEWVVE-EKNCPDDPNSKVDGCGDNTNCYYSENGKGYRCKCKQGFQGNPYL 277 (296)
Q Consensus 223 ~~p~vLdW~I~-~~~C~~a~~~~~yaC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYl 277 (296)
.||..--||+. ...|+... ...|..|++|+.... .-|.|.|..||.||.++
T Consensus 6 ~~~~~~~~~~~~~~~c~~~~---~~~c~~~a~C~~~~~-~~~~c~C~~G~ag~G~~ 57 (551)
T 3fby_A 6 GVPTSPVWWNSAQRFCPDGS---PSECHEHADCVLERD-GSRSCVCAVGWAGNGIL 57 (551)
T ss_dssp ---------CCBCCBCTTSS---BCCCCTTEEEEECTT-SCEEEEECTTEESSSSS
T ss_pred CCCCCceEEecccccCCCCC---CCCCCCCCeeEeCCC-CCEecCCCCCCCCCCcc
Confidence 46777677774 45797653 247999999987533 24799999999999997
No 48
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=85.46 E-value=0.46 Score=38.00 Aligned_cols=26 Identities=23% Similarity=0.727 Sum_probs=21.5
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCC
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNP 275 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNP 275 (296)
.|. |..|+|... +|+|.|.+||.|++
T Consensus 116 ~C~-~g~C~n~~g--~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 116 VCK-NGLCVNTRG--SFKCQCPSGMTLDA 141 (147)
T ss_dssp CSS-SSEEEEETT--EEEEECCTTCCBCT
T ss_pred CCC-CCEEECCCC--CEEeeCCCCCccCC
Confidence 475 568988754 89999999999986
No 49
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=84.47 E-value=0.32 Score=33.25 Aligned_cols=28 Identities=29% Similarity=0.800 Sum_probs=21.0
Q ss_pred CCCCCCceeecC--CCCceeEeeCCCCcCC
Q 041671 247 GCGDNTNCYYSE--NGKGYRCKCKQGFQGN 274 (296)
Q Consensus 247 aC~~nS~C~d~~--~g~GY~C~C~~Gy~GN 274 (296)
-|.+.-+|.... ...+|.|.|.+||.|.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~ 44 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQ 44 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESS
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccC
Confidence 487778897432 3348999999999985
No 50
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=84.28 E-value=0.39 Score=36.94 Aligned_cols=30 Identities=23% Similarity=0.473 Sum_probs=24.0
Q ss_pred ceeecCCCCceeEeeCCCCcCCCcc-CCccCcc
Q 041671 253 NCYYSENGKGYRCKCKQGFQGNPYL-GCVDIDE 284 (296)
Q Consensus 253 ~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~didE 284 (296)
.|++... +|+|.|.+||.|.+-- -|+++++
T Consensus 67 ~C~n~~g--~y~C~C~~G~~~~~~g~~C~~~~~ 97 (114)
T 1aut_L 67 YCLEEVG--WRRCSCAPGYKLGDDLLQCHPAVK 97 (114)
T ss_dssp EEEECSS--SEEEECCTTEEECTTSSCEEECSS
T ss_pred EeECCCC--CEEeECCCCeeECCCCCccCcCcc
Confidence 7887653 8999999999987765 7877655
No 51
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=83.38 E-value=0.41 Score=38.32 Aligned_cols=33 Identities=24% Similarity=0.542 Sum_probs=24.8
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCcc-CCccC
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYL-GCVDI 282 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~di 282 (296)
-|. |..|++... +|+|.|.+||+|++-- -|+|+
T Consensus 11 pC~-ng~C~n~~g--~y~C~C~~G~~g~~~~~~C~~~ 44 (147)
T 2w86_A 11 PCI-NGVCKNSPG--SFICECSSESTLDPTKTICIET 44 (147)
T ss_dssp CSB-TSEEEEETT--EEEEECCTTEEECTTSSBEEEC
T ss_pred CCC-CCEeECCCC--CEEeECCCCcccCCCCCeecCC
Confidence 474 678988754 8999999999998743 45443
No 52
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=82.95 E-value=0.67 Score=34.26 Aligned_cols=21 Identities=24% Similarity=0.629 Sum_probs=18.2
Q ss_pred CceeEeeCCCCcCCCccCCc--cCcccc
Q 041671 261 KGYRCKCKQGFQGNPYLGCV--DIDECL 286 (296)
Q Consensus 261 ~GY~C~C~~Gy~GNPYlGC~--didEC~ 286 (296)
.+|+|.|.+||. .|+ +||||.
T Consensus 30 ~~y~C~C~~G~~-----~C~~~~~~~C~ 52 (91)
T 1tpg_A 30 RVEYCWCNSGRA-----QCHSVPVKSCS 52 (91)
T ss_dssp CEEEEECSSSCC-----BCCEECEEECS
T ss_pred CCcEeECCCCCc-----ccccCcCCccc
Confidence 489999999997 685 899995
No 53
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=81.38 E-value=0.54 Score=37.64 Aligned_cols=31 Identities=19% Similarity=0.425 Sum_probs=24.8
Q ss_pred ceeecCCCCceeEeeCCCCcCCCcc-CCccCcc
Q 041671 253 NCYYSENGKGYRCKCKQGFQGNPYL-GCVDIDE 284 (296)
Q Consensus 253 ~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~didE 284 (296)
.|++... .+|+|.|.+||.+++-- -|++++|
T Consensus 101 ~C~~~~g-~~y~C~C~~Gy~l~~dG~~C~~~~e 132 (142)
T 2c4f_L 101 YCSDHTG-TKRSCRCHEGYSLLADGVSCTPTVE 132 (142)
T ss_dssp EEECCTT-SCCEEECCTTEEECTTSSCEEESSS
T ss_pred EeECCCC-CCEEEECCCCceECCCCCCCCCCCc
Confidence 6876543 38999999999976654 7999988
No 54
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=80.62 E-value=0.7 Score=32.76 Aligned_cols=32 Identities=19% Similarity=0.376 Sum_probs=23.5
Q ss_pred cCCCCCCceeecCCCCceeEee-CCCCcCCCcc-CC
Q 041671 246 DGCGDNTNCYYSENGKGYRCKC-KQGFQGNPYL-GC 279 (296)
Q Consensus 246 yaC~~nS~C~d~~~g~GY~C~C-~~Gy~GNPYl-GC 279 (296)
..|..+..|+|... +|+|.| ..||.+|+.- |+
T Consensus 11 ~~C~~~~~C~Nt~G--sy~C~~~~~g~~~~~~~~~~ 44 (71)
T 2kl7_A 11 EACKGEMKCINHYG--GYLCLPRSAAVINDLHGEGP 44 (71)
T ss_dssp CSCTTEEEEEETTC--CEEEEETTSCCCSCCSCSSC
T ss_pred CCCCCCCEeECCCC--CeEecccCCcccccccCCcc
Confidence 46876778988764 899984 4588887765 54
No 55
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=79.93 E-value=0.43 Score=38.59 Aligned_cols=31 Identities=19% Similarity=0.449 Sum_probs=24.4
Q ss_pred ce-eecCCCCceeEeeCCCCcCCCcc-CCccCccc
Q 041671 253 NC-YYSENGKGYRCKCKQGFQGNPYL-GCVDIDEC 285 (296)
Q Consensus 253 ~C-~d~~~g~GY~C~C~~Gy~GNPYl-GC~didEC 285 (296)
.| ++.. | +|+|.|.+||.+++=- -|++|+|+
T Consensus 98 ~C~~n~~-g-~y~C~C~~Gy~l~~dG~~C~~~~~~ 130 (146)
T 1x7a_L 98 FCKTGAD-S-KVLCSCTTGYRLAPDQKSCKPAVPF 130 (146)
T ss_dssp BCCCCSS-S-CCCCBCCTTEEECTTSSSEEECSSS
T ss_pred CCCCCCC-C-CEEeEcCCCcEeCCCCCcCCCCCCC
Confidence 78 6654 3 8999999999976543 79999886
No 56
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=79.56 E-value=0.83 Score=35.29 Aligned_cols=26 Identities=15% Similarity=0.292 Sum_probs=20.7
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCc
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPY 276 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPY 276 (296)
.| +..|++... +|+|.|.+||.|++-
T Consensus 88 ~C--~~~C~n~~g--~y~C~C~~G~~g~~~ 113 (118)
T 1dx5_I 88 FC--SGVCHNLPG--TFECICGPDSALAGQ 113 (118)
T ss_dssp SC--SSEEEECSS--SEEEEECSSSSCEEE
T ss_pred CC--cCeEEeCCC--CEEEECCCCCccCCC
Confidence 46 567887643 899999999999864
No 57
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=77.47 E-value=0.87 Score=36.04 Aligned_cols=30 Identities=20% Similarity=0.496 Sum_probs=23.6
Q ss_pred ceeecCCCCceeEeeCCCCcCCCcc-CCccCcc
Q 041671 253 NCYYSENGKGYRCKCKQGFQGNPYL-GCVDIDE 284 (296)
Q Consensus 253 ~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~didE 284 (296)
.|++... +|+|.|.+||.+++-- -|++|++
T Consensus 94 ~C~~~~g--~y~C~C~~Gy~l~~~g~~C~~~~~ 124 (134)
T 2vh0_B 94 FCHEEQN--SVVCSCARGYTLADNGKACIPTGP 124 (134)
T ss_dssp EEEEETT--EEEEECCTTEEECTTSSCEEESSS
T ss_pred EeECCCC--CEEEECCCCcEECCCCCccCcCCC
Confidence 7887653 8999999999966643 7888865
No 58
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=77.23 E-value=1.6 Score=35.86 Aligned_cols=28 Identities=25% Similarity=0.791 Sum_probs=22.3
Q ss_pred cCCCCCCceeecCCCCceeEeeCCCCcCC
Q 041671 246 DGCGDNTNCYYSENGKGYRCKCKQGFQGN 274 (296)
Q Consensus 246 yaC~~nS~C~d~~~g~GY~C~C~~Gy~GN 274 (296)
..|..+..|++...+ +|+|.|.+||.|.
T Consensus 138 ~~C~~~g~C~~~~~~-~~~C~C~~G~~G~ 165 (169)
T 2vj2_A 138 QPCLNGGTCSNTGPD-KYQCSCPEGYSGP 165 (169)
T ss_dssp CCCCTTCEEEECSTT-CEEEECCTTCCST
T ss_pred CCCCCCCEEcCCCCC-CcEeECCCCCcCc
Confidence 468778899875333 7999999999985
No 59
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=76.95 E-value=1.5 Score=31.89 Aligned_cols=33 Identities=27% Similarity=0.668 Sum_probs=20.7
Q ss_pred CCCCCCceeecCCCCceeEeeC--CCCcCCCcc-CCccCc
Q 041671 247 GCGDNTNCYYSENGKGYRCKCK--QGFQGNPYL-GCVDID 283 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~--~Gy~GNPYl-GC~did 283 (296)
.|. ..|++... +|+|.|. .||.-..-. -|+|||
T Consensus 52 ~C~--~~C~n~~g--~y~C~C~g~~G~~~~~~~~~C~di~ 87 (87)
T 1z6c_A 52 MCA--QLCVNYPG--GYTCYCDGKKGFKLAQDQKSCEVVS 87 (87)
T ss_dssp CCS--SEECCCSS--SCCEECCSSSCCBCCTTSSSCBCCC
T ss_pred CCC--CEEEccCC--CEEEECCCCcCCcccCCCCcceECc
Confidence 464 47877653 8999994 565544333 577664
No 60
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=76.57 E-value=1.5 Score=29.03 Aligned_cols=28 Identities=21% Similarity=0.575 Sum_probs=20.9
Q ss_pred cCCCCCCceeecCCCCceeEeeCCCCcCC
Q 041671 246 DGCGDNTNCYYSENGKGYRCKCKQGFQGN 274 (296)
Q Consensus 246 yaC~~nS~C~d~~~g~GY~C~C~~Gy~GN 274 (296)
.-|.+- +|........+.|+|..||.|.
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~ 41 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGYVGA 41 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCCccc
Confidence 457643 8876544458999999999996
No 61
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=72.59 E-value=1.3 Score=33.74 Aligned_cols=30 Identities=20% Similarity=0.537 Sum_probs=25.0
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCcc
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYL 277 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYl 277 (296)
.|..|+.|.....| -+.|+|..||.|+.+.
T Consensus 11 ~C~~NA~C~r~~~g-~e~C~C~~gy~gdg~~ 40 (99)
T 1ob1_C 11 QCPQNSGCFRHLDE-REECKCLLNYKQEGDK 40 (99)
T ss_dssp CCCTTEEEECCTTS-CCEEEECTTEEEETTE
T ss_pred CCCCCCCeEEcCCC-CEEEEecCCeecCCCe
Confidence 57789999877665 7899999999998763
No 62
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=72.58 E-value=0.74 Score=35.14 Aligned_cols=24 Identities=42% Similarity=0.980 Sum_probs=0.0
Q ss_pred CceeecCCCCceeEeeCCCCcCCCcc
Q 041671 252 TNCYYSENGKGYRCKCKQGFQGNPYL 277 (296)
Q Consensus 252 S~C~d~~~g~GY~C~C~~Gy~GNPYl 277 (296)
..|+|... +|+|.|.+||.|++--
T Consensus 80 ~~C~n~~g--sy~C~C~~Gy~~~~d~ 103 (107)
T 2w2n_E 80 QLCVNLEG--GYKCQCEEGFQLDPHT 103 (107)
T ss_dssp --------------------------
T ss_pred CeeecCCC--CEEEECCCCceECCCC
Confidence 46776643 8999999999998753
No 63
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=72.01 E-value=2 Score=32.94 Aligned_cols=36 Identities=25% Similarity=0.463 Sum_probs=26.9
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCccCCccCcc
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYLGCVDIDE 284 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYlGC~didE 284 (296)
.|..|+.|.....| -..|+|..||.|..- .|..+|.
T Consensus 17 ~Cp~NA~C~r~~~G-~e~CrCl~gY~~dg~-~Cv~~Np 52 (105)
T 1n1i_A 17 NVPENAACYRYLDG-TEEWRCLLGFKEVGG-KCVPASI 52 (105)
T ss_dssp CCCTTEEEEECTTS-CEEEEECTTEEECSS-SEEECCC
T ss_pred CCCCCCCeEECCCC-CEeEEEECCeeccCC-EEEECCc
Confidence 57799999887765 568999999998632 4554444
No 64
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=68.22 E-value=1.6 Score=34.65 Aligned_cols=26 Identities=35% Similarity=0.930 Sum_probs=20.1
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCC
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGN 274 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GN 274 (296)
-|..+..|.+.. ..|.|+|.+||+|+
T Consensus 126 pc~~~g~C~~~~--~~~~c~C~~g~~g~ 151 (157)
T 1g1t_A 126 SCSGHGECVETI--NNYTCKCDPGFSGL 151 (157)
T ss_dssp GGGGSEEEEEET--TEEEEEECTTEEST
T ss_pred CCCCCCEeecCC--CCeeEECCCCccCc
Confidence 465567787654 38999999999997
No 65
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=66.31 E-value=4 Score=26.88 Aligned_cols=28 Identities=32% Similarity=0.724 Sum_probs=20.4
Q ss_pred cCCCCCCceeecCCCCceeEeeCCCCcCC
Q 041671 246 DGCGDNTNCYYSENGKGYRCKCKQGFQGN 274 (296)
Q Consensus 246 yaC~~nS~C~d~~~g~GY~C~C~~Gy~GN 274 (296)
..|. |-+|.-......+.|+|..||.|.
T Consensus 18 ~yC~-nG~C~~i~~~~~~~C~C~~gy~G~ 45 (50)
T 2rnl_A 18 NFCI-HGECKYIEHLEAVTCKCQQEYFGE 45 (50)
T ss_dssp GTCS-SSEEEEETTTTEEEEECCSSCCSS
T ss_pred CcCC-CCEEEEecCCCCeeEECCCCcccc
Confidence 4575 348875444447899999999985
No 66
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=66.06 E-value=2.5 Score=35.94 Aligned_cols=29 Identities=21% Similarity=0.519 Sum_probs=22.6
Q ss_pred ceeecCCCCceeEeeCCCCcCCCcc-CCccCc
Q 041671 253 NCYYSENGKGYRCKCKQGFQGNPYL-GCVDID 283 (296)
Q Consensus 253 ~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~did 283 (296)
.|++..+ +|+|.|.+||.+++-- -|++++
T Consensus 94 ~C~n~~g--sy~C~C~~Gy~l~~dG~~C~~~~ 123 (195)
T 1nfu_B 94 FCHEEQN--SVVCSCARGYTLADNGKACIPTG 123 (195)
T ss_dssp EEEEETT--EEEEECCTTEEECTTSSCEEESS
T ss_pred EeECCCC--CeEEECCCCceeCCCCCccccCC
Confidence 7887653 8999999999965533 688875
No 67
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=65.17 E-value=2 Score=44.19 Aligned_cols=31 Identities=35% Similarity=0.891 Sum_probs=26.6
Q ss_pred ceeecCCCCceeEeeCCCCcCCCcc-CCccCccc
Q 041671 253 NCYYSENGKGYRCKCKQGFQGNPYL-GCVDIDEC 285 (296)
Q Consensus 253 ~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~didEC 285 (296)
.|+|... +|+|.|.+||+++|-. -|++++|+
T Consensus 364 ~C~n~~g--sy~C~C~~Gy~l~~~~~~C~~~~~~ 395 (791)
T 3m0c_C 364 LCVNLEG--GYKCQCEEGFQLDPHTKACKAVGSI 395 (791)
T ss_dssp TCCBCSS--CBCCCCCSSEECCSSCCCCEETTSC
T ss_pred eeecCCC--CceeecCCCCEeCCCCceeeecccc
Confidence 5766543 8999999999999988 99999987
No 68
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=64.87 E-value=2.6 Score=39.16 Aligned_cols=31 Identities=35% Similarity=0.891 Sum_probs=25.1
Q ss_pred ceeecCCCCceeEeeCCCCcCCCcc-CCccCccc
Q 041671 253 NCYYSENGKGYRCKCKQGFQGNPYL-GCVDIDEC 285 (296)
Q Consensus 253 ~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~didEC 285 (296)
.|.|... +|+|.|.+||++.+-- -|+++++.
T Consensus 52 ~C~n~~g--~~~C~C~~g~~~~~~~~~C~~~~~~ 83 (400)
T 3p5b_L 52 LCVNLEG--GYKCQCEEGFQLDPHTKACKAVGSI 83 (400)
T ss_dssp CCBCCSS--SCBCCCCTTCCCCTTTSSCCCSTTS
T ss_pred ccCCCcc--ceeeeccccccccccccceeecccc
Confidence 7877643 8999999999999876 88887643
No 69
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=64.84 E-value=2.4 Score=30.88 Aligned_cols=35 Identities=26% Similarity=0.642 Sum_probs=23.2
Q ss_pred CCCCCCCCCCcCCCCCCceeecCCCCceeEeeCCCCcCC
Q 041671 236 NCPDDPNSKVDGCGDNTNCYYSENGKGYRCKCKQGFQGN 274 (296)
Q Consensus 236 ~C~~a~~~~~yaC~~nS~C~d~~~g~GY~C~C~~Gy~GN 274 (296)
.|++.- ...|.+. .|.-......|.|+|.+||.|.
T Consensus 39 pC~~~~---~~yClnG-~C~~i~~~~~~~C~C~~GYtG~ 73 (79)
T 1xdt_R 39 PCLRKY---KDFCIHG-ECKYVKELRAPSCICHPGYHGE 73 (79)
T ss_dssp CTTTTT---TTCCSSE-EECCBGGGTBCCEEECTTEEST
T ss_pred CCCccc---cCcCCCC-EeeeecCCCCeEEEcCCCcccc
Confidence 476432 3467644 7854333347999999999985
No 70
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=64.08 E-value=1.6 Score=35.82 Aligned_cols=23 Identities=26% Similarity=0.793 Sum_probs=19.8
Q ss_pred ceeEeeCCCCcCCCccCCc-cCccccC
Q 041671 262 GYRCKCKQGFQGNPYLGCV-DIDECLD 287 (296)
Q Consensus 262 GY~C~C~~Gy~GNPYlGC~-didEC~~ 287 (296)
.|+|.|.+||.|. -|+ |||||..
T Consensus 113 ~~~C~C~~G~~G~---~C~~~~~~C~~ 136 (169)
T 2vj2_A 113 PWQCLCETNWGGQ---LCDKDLNYCGT 136 (169)
T ss_dssp TTCCEECTTEETT---TTCEESCHHHH
T ss_pred CCEEeCCCCCCCC---cccCCCCCCCC
Confidence 7999999999985 687 8999963
No 71
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=62.63 E-value=2.8 Score=34.13 Aligned_cols=32 Identities=22% Similarity=0.693 Sum_probs=22.4
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCcc-CCccC
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYL-GCVDI 282 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~di 282 (296)
.|. + .|.+... +|+|.|.+||+..+=- -|+++
T Consensus 136 ~C~-~-~C~n~~g--~~~C~C~~Gy~l~~d~~~C~~~ 168 (170)
T 1szb_A 136 TCD-H-HCHNHLG--GFYCSCRAGYVLHRNKRTCSEQ 168 (170)
T ss_dssp SSS-S-EEEEETT--EEEEECCTTEEECTTSSCEEEC
T ss_pred ccC-C-ccccCCC--CEEEeCCCCcEECCCCCccccc
Confidence 374 3 6987654 7999999999854433 56654
No 72
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=55.05 E-value=4.6 Score=40.87 Aligned_cols=30 Identities=27% Similarity=0.737 Sum_probs=22.0
Q ss_pred eeEeeCCCCcCCCccCCc---cCccccCCCCCCCCC
Q 041671 263 YRCKCKQGFQGNPYLGCV---DIDECLDKEKYHCEG 295 (296)
Q Consensus 263 Y~C~C~~Gy~GNPYlGC~---didEC~~~~~~~C~g 295 (296)
|+|.|.+||.|. .|+ ++++|...+..+|.+
T Consensus 545 g~C~C~~Gy~G~---~CeC~~~~~~C~~~~g~~C~~ 577 (690)
T 3fcs_B 545 GDCLCDSDWTGY---YCNCTTRTDTCMSSNGLLCSG 577 (690)
T ss_dssp TEEEECTTEESS---SSCEECCCTTTBCTTSSBTSS
T ss_pred CeeECcCCCcCC---CCccCCCCCcccCCCCCCCCC
Confidence 799999999987 565 688886544356643
No 73
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=53.38 E-value=7.1 Score=25.58 Aligned_cols=28 Identities=21% Similarity=0.603 Sum_probs=19.6
Q ss_pred cCCCCCCceeecCCCCceeEeeCCCCcCC
Q 041671 246 DGCGDNTNCYYSENGKGYRCKCKQGFQGN 274 (296)
Q Consensus 246 yaC~~nS~C~d~~~g~GY~C~C~~Gy~GN 274 (296)
..|.+ -+|.-......+.|+|..||.|-
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~ 41 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGA 41 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETT
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccC
Confidence 35754 57854333347899999999985
No 74
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=52.53 E-value=7.1 Score=30.32 Aligned_cols=26 Identities=23% Similarity=0.609 Sum_probs=17.4
Q ss_pred CCCCCceeecCCCCce-eEeeCCCCcC
Q 041671 248 CGDNTNCYYSENGKGY-RCKCKQGFQG 273 (296)
Q Consensus 248 C~~nS~C~d~~~g~GY-~C~C~~Gy~G 273 (296)
|.+...|.+.....+| +|.|.+||.|
T Consensus 3 C~nggtC~~~~~~~~~~~C~Cp~g~~G 29 (122)
T 2fd6_A 3 CLNGGTCVSNKYFSNIHWCNCPKKFGG 29 (122)
T ss_dssp CCSSCEEEECTTTTTCEEEECCTTEES
T ss_pred CCCcCCcCCCcccCCCCCccCCCCCCC
Confidence 5555678765422255 8999998877
No 75
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=40.28 E-value=12 Score=37.59 Aligned_cols=31 Identities=35% Similarity=0.891 Sum_probs=23.8
Q ss_pred ceeecCCCCceeEeeCCCCcCCCcc-CCccCccc
Q 041671 253 NCYYSENGKGYRCKCKQGFQGNPYL-GCVDIDEC 285 (296)
Q Consensus 253 ~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~didEC 285 (296)
.|+|... +|+|.|.+||++++-- -|+++++.
T Consensus 346 ~C~n~~g--~y~C~C~~G~~~~~~~~~C~~~~~~ 377 (699)
T 1n7d_A 346 LCVNLEG--GYKCQCEEGFQLDPHTKACKAVGSI 377 (699)
T ss_dssp TCCBCSS--CBCCCCCSSCBCCSSCCCCBCCSSC
T ss_pred ccccCCC--CeeeeeecccccCCCCCcccccccc
Confidence 5665443 8999999999999876 78877543
No 76
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=38.63 E-value=14 Score=29.28 Aligned_cols=43 Identities=21% Similarity=0.437 Sum_probs=26.4
Q ss_pred cEEEEEEEec-CCCCCCCCCCCcCCCCCCceeecCCCCceeEeeCCCCcCC
Q 041671 225 NVTIEWVVEE-KNCPDDPNSKVDGCGDNTNCYYSENGKGYRCKCKQGFQGN 274 (296)
Q Consensus 225 p~vLdW~I~~-~~C~~a~~~~~yaC~~nS~C~d~~~g~GY~C~C~~Gy~GN 274 (296)
...+.|...+ ..|.... ...|. ..|.+... +|+|.|.+||+..
T Consensus 107 GF~~~y~~~d~~eC~~~~---~~~C~--~~C~n~~g--~~~C~C~~Gy~l~ 150 (159)
T 1nzi_A 107 GFAAYYVATDINECTDFV---DVPCS--HFCNNFIG--GYFCSCPPEYFLH 150 (159)
T ss_dssp EEEEEEEEEECCTTTC-C---CCCSS--SEEEEETT--EEEEECCTTCEEC
T ss_pred cceeeeecccCcccCCCC---CCCCC--CcccCcCC--CEEEecCCCcEEC
Confidence 4455565433 3686542 23563 26887743 7999999999843
No 77
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=37.06 E-value=8.9 Score=35.17 Aligned_cols=34 Identities=26% Similarity=0.739 Sum_probs=21.3
Q ss_pred CCCCCCceeecCCCCceeEeeCCCCcCCCcc-CCccCcc
Q 041671 247 GCGDNTNCYYSENGKGYRCKCKQGFQGNPYL-GCVDIDE 284 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~didE 284 (296)
.|.. .|.+... +|+|.|.+||+..|-- .|+.+++
T Consensus 52 ~C~~--~C~~~~g--~~~C~C~~g~~l~~d~~~C~~~~~ 86 (386)
T 3v65_B 52 YCSQ--GCTNSEG--AFQCWCEAGYELRPDRRSCKALGP 86 (386)
T ss_dssp CCTT--EEC-------CCEECCTTEEECTTSSCEEECSS
T ss_pred cccC--cCCCCCC--CCeEEECCCceEcCCCCeECCccc
Confidence 4642 3877543 7999999999976654 6776654
No 78
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=36.29 E-value=25 Score=32.49 Aligned_cols=28 Identities=29% Similarity=0.813 Sum_probs=21.2
Q ss_pred CcCCCCCCceeecCCCCceeEeeCC-CCcCC
Q 041671 245 VDGCGDNTNCYYSENGKGYRCKCKQ-GFQGN 274 (296)
Q Consensus 245 ~yaC~~nS~C~d~~~g~GY~C~C~~-Gy~GN 274 (296)
...|.++..|.+.. .+|.|.|.. ||.|-
T Consensus 190 ~~pC~n~g~C~~~~--~~~~C~C~~~~~~G~ 218 (410)
T 3asi_A 190 EDSCSNQGVCLQQW--DGFSCDCSMTSFSGP 218 (410)
T ss_dssp TTSSSTTCEEEECS--SSEEEECTTTSEEST
T ss_pred cccCCCCCEecCCC--CCceEeccCCcccCC
Confidence 34688888998753 389999996 88763
No 79
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=34.14 E-value=4.1 Score=36.41 Aligned_cols=36 Identities=17% Similarity=0.150 Sum_probs=27.4
Q ss_pred cCCCCCCceeecCCCCceeEeeCCCCcCCCccCCc-cCcccc
Q 041671 246 DGCGDNTNCYYSENGKGYRCKCKQGFQGNPYLGCV-DIDECL 286 (296)
Q Consensus 246 yaC~~nS~C~d~~~g~GY~C~C~~Gy~GNPYlGC~-didEC~ 286 (296)
..|.++..|+|..+ .|+|.|.+||+|+ -|+ +||||+
T Consensus 172 ~~c~ngg~C~dg~~--~y~C~Cp~Gf~G~---~c~~~i~ec~ 208 (267)
T 4fbr_A 172 AKSNDGGKTLSGTM--TYNGEGPIGFRGT---LTSPDTYTVE 208 (267)
T ss_dssp EECSSTTSEEEEEE--EETTSCCEEEEEE---EEETTEEEEE
T ss_pred CCCCCCCEeeCCCC--CeEEeCCCCcccc---ccccccceec
Confidence 45778889988655 8999999999986 343 567764
No 80
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=33.66 E-value=3.5 Score=36.85 Aligned_cols=44 Identities=14% Similarity=0.170 Sum_probs=28.0
Q ss_pred EEEEEecCCCCCCCCCCCcCCCCCCceeecCCCCceeEeeCCCCcCC
Q 041671 228 IEWVVEEKNCPDDPNSKVDGCGDNTNCYYSENGKGYRCKCKQGFQGN 274 (296)
Q Consensus 228 LdW~I~~~~C~~a~~~~~yaC~~nS~C~d~~~g~GY~C~C~~Gy~GN 274 (296)
..|+++. .|+.....-+..|.++-.|+|.+. .|+|.|..||+|-
T Consensus 21 g~~~~g~-~~~~n~~~~~~~c~ngG~C~~g~~--~y~C~Cp~Gf~G~ 64 (267)
T 4fbr_A 21 GLWLIGA-RDKQNVVALDIKSDDGGKTLKGTM--TYNGEGPIGFRGT 64 (267)
T ss_dssp EEEECCC-CSSCCEEEEEEECSSTTSEEEEEE--EETTSCCEEEEEE
T ss_pred Cceeecc-ccccccccCCCCcCCCCeecCCCC--CeEEeCCCCcccc
Confidence 4566654 343332111235667888888664 7999999999864
No 81
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=32.49 E-value=13 Score=22.01 Aligned_cols=20 Identities=30% Similarity=1.039 Sum_probs=16.8
Q ss_pred EeeCCCCcCCCcc-CCccCccc
Q 041671 265 CKCKQGFQGNPYL-GCVDIDEC 285 (296)
Q Consensus 265 C~C~~Gy~GNPYl-GC~didEC 285 (296)
|.|++||-=|. . +|.-.+||
T Consensus 7 C~C~~G~vrn~-~G~CV~~~~C 27 (32)
T 3ssb_I 7 CYCEDGYARDV-NGKCIPIKDC 27 (32)
T ss_dssp EEECTTEEECT-TSCEEEGGGC
T ss_pred CCcCCCcEECC-CCCEECHHHC
Confidence 99999997665 3 79999988
No 82
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=30.98 E-value=31 Score=30.67 Aligned_cols=29 Identities=28% Similarity=0.462 Sum_probs=20.0
Q ss_pred ceeecCCCCceeEeeCCCCcCCCcc-CCcc
Q 041671 253 NCYYSENGKGYRCKCKQGFQGNPYL-GCVD 281 (296)
Q Consensus 253 ~C~d~~~g~GY~C~C~~Gy~GNPYl-GC~d 281 (296)
.|...+.+.+|+|.|.+||.=.+=- -|.|
T Consensus 280 ~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~ 309 (318)
T 3sov_A 280 LCLMSPVKPFYQCACPTGVKLLENGKTCKD 309 (318)
T ss_dssp EEEECSSTTSEEEECSTTCCBCTTSSCBCC
T ss_pred EEecCCCCCCeEEECCCCCEECCCCCCCCC
Confidence 4666666568999999999755422 4444
No 83
>3rm2_L Thrombin light chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_L* 1a3e_L* 1a46_L* 1a4w_L* 1a5g_L* 1a61_L* 1abi_L* 1abj_L* 1ad8_L* 1ae8_L* 1afe_L* 1a3b_L* 1ai8_L* 1aix_L* 1awf_L* 1awh_A* 1ay6_L* 1b5g_L* 1b7x_A 1ba8_A* ...
Probab=28.54 E-value=21 Score=21.87 Aligned_cols=16 Identities=25% Similarity=0.478 Sum_probs=9.9
Q ss_pred CCCCCCCCCCCCCCee
Q 041671 41 FGINDPMCAMNMNFFL 56 (296)
Q Consensus 41 FGig~~~C~~~~~F~l 56 (296)
||.|..+|+..|.|+-
T Consensus 2 fG~ge~~CG~rPlfEk 17 (36)
T 3rm2_L 2 FGSGEADCGLRPLFEK 17 (36)
T ss_dssp ----CTTTTCCTTTGG
T ss_pred CcccccccccCchhhh
Confidence 7888679999888874
No 84
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=27.43 E-value=30 Score=27.61 Aligned_cols=28 Identities=21% Similarity=0.576 Sum_probs=20.4
Q ss_pred CCCCCCceeecCCCCce-eEeeCCCCcCC
Q 041671 247 GCGDNTNCYYSENGKGY-RCKCKQGFQGN 274 (296)
Q Consensus 247 aC~~nS~C~d~~~g~GY-~C~C~~Gy~GN 274 (296)
-|.+.-.|.+...-.+| +|.|.+||.|-
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~ 42 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQ 42 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEEST
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCC
Confidence 46677788765323477 89999999884
No 85
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=20.69 E-value=33 Score=34.64 Aligned_cols=29 Identities=24% Similarity=0.536 Sum_probs=20.1
Q ss_pred eeEeeC----CCCcCCCccCCc-cCccccCCCCCCCC
Q 041671 263 YRCKCK----QGFQGNPYLGCV-DIDECLDKEKYHCE 294 (296)
Q Consensus 263 Y~C~C~----~Gy~GNPYlGC~-didEC~~~~~~~C~ 294 (296)
++|.|. +||.|. .|+ |+++|...+..+|.
T Consensus 504 g~C~C~~~~~~Gy~G~---~Ce~~~~~C~~~~~~~C~ 537 (690)
T 3fcs_B 504 GQCVCHSSDFGKITGK---YCECDDFSCVRYKGEMCS 537 (690)
T ss_dssp SSEEECCCSSCCCBST---TSCBCSSCCCBSSSSBGG
T ss_pred CeeEeecCCCCCeeCC---CcCcccCcCcCCCCCCCC
Confidence 689999 888875 576 77888632234564
No 86
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=20.26 E-value=40 Score=28.78 Aligned_cols=43 Identities=19% Similarity=0.331 Sum_probs=28.4
Q ss_pred cCCCCCCceeecCCCCceeEeeCCCCcCCC-cc--CCc-cCccccCCCCCCCC
Q 041671 246 DGCGDNTNCYYSENGKGYRCKCKQGFQGNP-YL--GCV-DIDECLDKEKYHCE 294 (296)
Q Consensus 246 yaC~~nS~C~d~~~g~GY~C~C~~Gy~GNP-Yl--GC~-didEC~~~~~~~C~ 294 (296)
..|..+-.|.+ .+|.|.+|+.|++ |. -|+ |+++|...+.-+|.
T Consensus 143 ~~Csg~G~C~~------g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~~~g~~C~ 189 (217)
T 2p28_B 143 IICSGLGDCVC------GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCG 189 (217)
T ss_dssp CBGGGTEEEET------TEEEECCCCSTTCCEESTTSCEESSCSCEETTEETT
T ss_pred CCCCCCCEEeC------CceECCCCCCCcccEECCCcccCCccCCCCCCCCCC
Confidence 35766777863 2799999987776 44 687 67788543223464
Done!