BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>041675
MFFSTGQVLENAMKAALEMLQTVEKHGPGEKKFFNGDDIGLADLAFGAIAYWLQVLEDVM
EVNDGCRSQQK

High Scoring Gene Products

Symbol, full name Information P value
GSTU8
AT3G09270 		protein from Arabidopsis thaliana 0.00014

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041675
        (71 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2083544 - symbol:GSTU8 "AT3G09270" species:370...    96  0.00014   1


>TAIR|locus:2083544 [details] [associations]
            symbol:GSTU8 "AT3G09270" species:3702 "Arabidopsis
            thaliana" [GO:0004364 "glutathione transferase activity"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM;NAS] [GO:0009407
            "toxin catabolic process" evidence=RCA;TAS] [GO:0046686 "response
            to cadmium ion" evidence=IEP] [GO:0006635 "fatty acid
            beta-oxidation" evidence=RCA] [GO:0010583 "response to
            cyclopentenone" evidence=RCA] [GO:0043161 "proteasomal
            ubiquitin-dependent protein catabolic process" evidence=RCA]
            [GO:0051788 "response to misfolded protein" evidence=RCA]
            [GO:0080129 "proteasome core complex assembly" evidence=RCA]
            InterPro:IPR004045 PROSITE:PS50404 InterPro:IPR004046 Pfam:PF00043
            GO:GO:0005829 GO:GO:0005737 GO:GO:0046686 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0009636 Gene3D:3.40.30.10
            InterPro:IPR012336 SUPFAM:SSF52833 Gene3D:1.20.1050.10
            InterPro:IPR010987 SUPFAM:SSF47616 PROSITE:PS50405 GO:GO:0004364
            EMBL:AC011436 InterPro:IPR017933 eggNOG:COG0625 HSSP:O65032
            KO:K00799 GO:GO:0009407 HOGENOM:HOG000125749 EMBL:BT024844
            EMBL:AY086116 IPI:IPI00533769 RefSeq:NP_187538.1 UniGene:At.40136
            ProteinModelPortal:Q9SR36 SMR:Q9SR36 STRING:Q9SR36 PaxDb:Q9SR36
            PRIDE:Q9SR36 EnsemblPlants:AT3G09270.1 GeneID:820083
            KEGG:ath:AT3G09270 TAIR:At3g09270 InParanoid:Q9SR36 OMA:WGPESER
            PhylomeDB:Q9SR36 ProtClustDB:CLSN2722080 Genevestigator:Q9SR36
            Uniprot:Q9SR36
        Length = 224

 Score = 96 (38.9 bits), Expect = 0.00014, P = 0.00014
 Identities = 21/53 (39%), Positives = 30/53 (56%)

Query:    10 ENAMKAALEMLQTVEKHGPGEKKFFNGDDIGLADLAFGAIAYWLQVLEDVMEV 62
             E  +K A E L+ +EK   G+K FF G+ IG  D+A   I YWL + ++   V
Sbjct:   125 EKEVKEAYEGLKCLEKE-LGDKLFFGGETIGFVDIAADFIGYWLGIFQEASGV 176


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.136   0.399    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       71        71   0.00091  102 3  11 22  0.47    28
                                                     29  0.42    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  501 (53 KB)
  Total size of DFA:  91 KB (2067 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.25u 0.13s 8.38t   Elapsed:  00:00:01
  Total cpu time:  8.25u 0.13s 8.38t   Elapsed:  00:00:01
  Start:  Sat May 11 00:06:51 2013   End:  Sat May 11 00:06:52 2013

Back to top