BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>041680
MFAWLLCLILVSEAWPVKCQYQQQQLIILAGQSNMAGRGGVTNDTRTNKLTWDGIVPPQC
QPNPSILRLTAKLKWVLAHEPLHADIDVNKTNGVGPGLPFANAVLTKVPNFGVIGLVPCA
IGGTNISQWRKGSSLYEQMIQRAQVALRGGGTIRAVLWYQGESDTVNLEDAKLYKERSDM
FFTDLRSDLQSPLLPIIRVALASGEGPFIEIVRKAQLSSDLPNVRCVDAMGLPLEPDGLH
LTTPAQGSTLNSWSNEALRVNLSLLVFRILEGSCRISKQAVSSLPHCFMT

High Scoring Gene Products

Symbol, full name Information P value
AT3G53010 protein from Arabidopsis thaliana 4.7e-80
AT4G34215 protein from Arabidopsis thaliana 1.4e-64

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041680
        (290 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2085241 - symbol:AT3G53010 "AT3G53010" species...   804  4.7e-80   1
TAIR|locus:505006557 - symbol:AT4G34215 species:3702 "Ara...   658  1.4e-64   1


>TAIR|locus:2085241 [details] [associations]
            symbol:AT3G53010 "AT3G53010" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686
            GenomeReviews:BA000014_GR eggNOG:NOG44446 HOGENOM:HOG000240574
            ProtClustDB:CLSN2689756 InterPro:IPR005181 Pfam:PF03629
            EMBL:AK229401 IPI:IPI00530443 RefSeq:NP_190869.3 UniGene:At.23389
            ProteinModelPortal:Q0WNN6 PaxDb:Q0WNN6 PRIDE:Q0WNN6 DNASU:824467
            EnsemblPlants:AT3G53010.1 GeneID:824467 KEGG:ath:AT3G53010
            TAIR:At3g53010 InParanoid:Q0WNN6 OMA:PPLHADI PhylomeDB:Q0WNN6
            Genevestigator:Q0WNN6 Uniprot:Q0WNN6
        Length = 297

 Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
 Identities = 149/223 (66%), Positives = 183/223 (82%)

Query:    26 LIILAGQSNMAGRGGVTNDTRTNKLTWDGIVPPQCQPNPSILRLTAKLKWVLAHEPLHAD 85
             + ILAGQSNMAGRGGV NDT TN   WDG++PP+C+ NPSILRLT+KL+W  A EPLH D
Sbjct:    31 IFILAGQSNMAGRGGVYNDTATNTTVWDGVIPPECRSNPSILRLTSKLEWKEAKEPLHVD 90

Query:    86 IDVNKTNGVGPGLPFANAVLTKVPNFGVIGLVPCAIGGTNISQWRKGSSLYEQMIQRAQV 145
             ID+NKTNGVGPG+PFAN V+ +   FG +GLVPC+IGGT +SQW+KG  LYE+ ++RA+ 
Sbjct:    91 IDINKTNGVGPGMPFANRVVNR---FGQVGLVPCSIGGTKLSQWQKGEFLYEETVKRAKA 147

Query:   146 ALR--GGGTIRAVLWYQGESDTVNLEDAKLYKERSDMFFTDLRSDLQSPLLPIIRVALAS 203
             A+   GGG+ RAVLWYQGESDTV++ DA +YK+R   FF+DLR+DLQ P LPII+VALA+
Sbjct:   148 AMASGGGGSYRAVLWYQGESDTVDMVDASVYKKRLVKFFSDLRNDLQHPNLPIIQVALAT 207

Query:   204 GEGPFIEIVRKAQLSSDLPNVRCVDAMGLPLEPDGLHLTTPAQ 246
             G GP+++ VRKAQL +DL NV CVDA GLPLEPDGLHLTT +Q
Sbjct:   208 GAGPYLDAVRKAQLKTDLENVYCVDARGLPLEPDGLHLTTSSQ 250


>TAIR|locus:505006557 [details] [associations]
            symbol:AT4G34215 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
            evidence=ISS] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016787
            EMBL:AL021961 EMBL:AL161585 EMBL:AY088389 IPI:IPI00522520
            PIR:T05414 RefSeq:NP_567960.1 RefSeq:NP_849493.1 UniGene:At.27025
            PDB:2APJ PDBsum:2APJ ProteinModelPortal:Q8L9J9 SMR:Q8L9J9
            PaxDb:Q8L9J9 PRIDE:Q8L9J9 DNASU:829570 EnsemblPlants:AT4G34215.1
            EnsemblPlants:AT4G34215.2 GeneID:829570 KEGG:ath:AT4G34215
            TAIR:At4g34215 eggNOG:NOG44446 HOGENOM:HOG000240574
            InParanoid:Q8L9J9 OMA:PFIQVAL PhylomeDB:Q8L9J9
            ProtClustDB:CLSN2689756 EvolutionaryTrace:Q8L9J9
            Genevestigator:Q8L9J9 GermOnline:AT4G34215 InterPro:IPR005181
            Pfam:PF03629 Uniprot:Q8L9J9
        Length = 260

 Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
 Identities = 129/223 (57%), Positives = 160/223 (71%)

Query:    25 QLIILAGQSNMAGRGGVTNDTRTNKLTWDGIVPPQCQPNPSILRLTAKLKWVLAHEPLHA 84
             Q+ IL+GQSNMAGRGGV  D   N+  WD I+PP+C PN SILRL+A L+W  AHEPLH 
Sbjct:    23 QIFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPLHV 82

Query:    85 DIDVNKTNGVGPGLPFANAVLTKVP-NFGVIGLVPCAIGGTNISQWRKGSSLYEQMIQRA 143
             DID  K  GVGPG+ FANAV  ++  +  VIGLVPCA GGT I +W +GS LYE+M++R 
Sbjct:    83 DIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGSHLYERMVKRT 142

Query:   144 QVALRGGGTIRAVLWYQGESDTVNLEDAKLYKERSDMFFTDLRSDLQSPLLPIIRVALAS 203
             + + + GG I+AVLWYQGESD +++ DA+ Y    D    +LR DL  P LPII+VA+AS
Sbjct:   143 EESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIAS 202

Query:   204 GEGPFIEIVRKAQLSSDLPNVRCVDAMGLPLEPDGLHLTTPAQ 246
             G G +I+ VR+AQL   L NV CVDA GLPL+ D LHLTT AQ
Sbjct:   203 GGG-YIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQ 244


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.136   0.420    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      290       290   0.00089  115 3  11 22  0.37    34
                                                     33  0.43    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  620 (66 KB)
  Total size of DFA:  225 KB (2122 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.06u 0.13s 22.19t   Elapsed:  00:00:01
  Total cpu time:  22.06u 0.13s 22.19t   Elapsed:  00:00:01
  Start:  Sat May 11 00:09:07 2013   End:  Sat May 11 00:09:08 2013

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