BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041682
(108 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var.
radiata GN=ARG7 PE=2 SV=1
Length = 92
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 24 VPKGFRVMYIGEARQKFVVPIECLSSVMFRALLNQFEAKDKVDGP-NPIVLPCSPLMFQW 82
PKG+ +Y+GE ++FV+P+ L+ +F+ LL+Q E + D P + +PCS +FQ
Sbjct: 25 APKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQH 84
Query: 83 ILNLASSK 90
I + S++
Sbjct: 85 ITSCLSAQ 92
>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1
Length = 82
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 20 KRRKVPKGFRVMYIGEARQKFVVPIECLSSVMFRALLNQFEAKDKVDGP-NPIVLPCSPL 78
K PKG+ +Y+GE ++FV+P+ L+ F+ LL+Q E + D P + +PCS
Sbjct: 13 KAADAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSED 72
Query: 79 MFQWILN 85
+FQ I +
Sbjct: 73 VFQCITS 79
>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1
Length = 90
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 20 KRRKVPKGFRVMYIGEARQKFVVPIECLSSVMFRALLNQFEAKDKVDGPN-PIVLPCSPL 78
K V KG+ +Y+GE ++FV+P+ L+ F+ LL+Q E + PN + +PCS
Sbjct: 21 KAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSED 80
Query: 79 MFQWILNL 86
+FQ I +
Sbjct: 81 VFQHITSF 88
>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1
Length = 82
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 24 VPKGFRVMYIGEARQKFVVPIECLSSVMFRALLNQFEAKDKVDGP-NPIVLPCSPLMFQW 82
PKG+ +Y+GE ++FV+P+ ++ F+ LL Q E + D P + +PCS +FQ
Sbjct: 17 APKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQR 76
Query: 83 I 83
I
Sbjct: 77 I 77
>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1
Length = 92
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 20 KRRKVPKGFRVMYIGEARQKFVVPIECLSSVMFRALLNQFEAKDKVDGP-NPIVLPC 75
K +VPKG+ V+Y+G+ ++F++P+ L+ F+ LLNQ E + D P + +PC
Sbjct: 21 KSVEVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPC 77
>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1
Length = 93
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 6 IRERLISLVTKLKLKRRKVPKGFRVMYIGEARQKFVVPIECLSSVMFRALLNQFEAKDKV 65
I R T+ KR VPKG+ +Y+G+ ++F +P+ L+ F+ LL+Q E +
Sbjct: 8 IVRRTSFYTTQAASKRVDVPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGY 67
Query: 66 DGP-NPIVLPCSPLMF 80
D P + +PC F
Sbjct: 68 DHPMGGLTIPCKEEEF 83
>sp|Q8F3I3|ISPH_LEPIN 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar Lai
(strain 56601) GN=ispH PE=3 SV=2
Length = 312
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 4 LKIRERLISLVTKLKLKRRKVPKGFRVMYIG-EARQKFVVPIECLSSVMFRALLNQFEAK 62
+KI + LVT++ K RK+ +++YIG E + + + + +L + K
Sbjct: 91 MKIGDATCPLVTRVHRKARKIKDTHQIIYIGHEGHDEAIGTMGEAEMFLVESLEDIISLK 150
Query: 63 DKVDGPNPIVLPCSPLMFQWILNLASSKSPADH 95
DK+D PN P + LM Q L++A +K+ D
Sbjct: 151 DKID-PNK---PLTYLM-QTTLSVADTKNIIDQ 178
>sp|Q72S57|ISPH_LEPIC 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar
copenhageni (strain Fiocruz L1-130) GN=ispH PE=3 SV=2
Length = 312
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 4 LKIRERLISLVTKLKLKRRKVPKGFRVMYIG-EARQKFVVPIECLSSVMFRALLNQFEAK 62
+KI + LVT++ K RK+ +++YIG E + + + + +L + K
Sbjct: 91 MKIGDATCPLVTRVHRKARKIKDTHQIIYIGHEGHDEAIGTMGEAEMFLVESLEDIISLK 150
Query: 63 DKVDGPNPIVLPCSPLMFQWILNLASSKSPADH 95
DK+D PN P + LM Q L++A +K+ D
Sbjct: 151 DKID-PNK---PLTYLM-QTTLSVADTKNIIDQ 178
>sp|Q94481|CIGB_DICDI FNIP repeat-containing protein cigB OS=Dictyostelium discoideum
GN=cigB PE=2 SV=3
Length = 744
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 1 MSKLKIRERLISLVTKL--KLKRRKVPKGFRVMYIGEARQKFVV 42
+SKLK + L++ KL + +P+G +V+YIG+ +Q+ ++
Sbjct: 324 LSKLKKLPNNVLLLSGFNQKLTKGIIPEGVKVLYIGDIKQELII 367
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,033,871
Number of Sequences: 539616
Number of extensions: 1273836
Number of successful extensions: 2627
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2615
Number of HSP's gapped (non-prelim): 15
length of query: 108
length of database: 191,569,459
effective HSP length: 76
effective length of query: 32
effective length of database: 150,558,643
effective search space: 4817876576
effective search space used: 4817876576
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)