Query 041682
Match_columns 108
No_of_seqs 118 out of 638
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 16:17:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041682.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041682hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3drz_A BTB/POZ domain-containi 63.1 28 0.00096 22.6 6.6 62 27-91 6-72 (107)
2 2vkp_A BTB/POZ domain-containi 57.4 21 0.00073 22.1 4.8 60 29-92 11-75 (109)
3 1vd2_A Protein kinase C, IOTA 54.7 20 0.00067 23.5 4.4 64 27-94 5-81 (89)
4 2vpk_A Myoneurin; transcriptio 53.9 27 0.00092 22.0 4.9 55 29-92 25-84 (116)
5 1r29_A B-cell lymphoma 6 prote 50.1 27 0.00093 22.4 4.5 58 29-92 32-93 (127)
6 1s1g_A Potassium voltage-gated 48.0 19 0.00064 24.5 3.6 63 25-91 11-75 (124)
7 1und_A Advillin, P92; actin bi 47.6 4.5 0.00015 22.8 0.3 19 45-63 1-19 (37)
8 2al3_A TUG long isoform; TUG U 46.8 19 0.00064 23.9 3.3 38 29-68 11-48 (90)
9 2xko_C PIPX, global nitrogen r 38.9 3.6 0.00012 27.6 -1.2 12 45-56 5-16 (89)
10 3n5b_B ASR0485 protein; PII, P 38.1 4.3 0.00015 28.3 -1.0 28 21-56 12-39 (112)
11 3ga1_A Nucleus accumbens-assoc 36.6 47 0.0016 21.3 4.1 53 29-90 36-92 (129)
12 3b84_A Zinc finger and BTB dom 35.2 72 0.0025 20.2 4.8 55 29-92 27-84 (119)
13 2nz0_B Potassium voltage-gated 32.2 31 0.0011 23.9 2.7 63 25-91 33-97 (140)
14 1w8x_N Protein P31, protein C, 31.6 12 0.0004 26.2 0.3 29 24-53 85-123 (126)
15 2if5_A Zinc finger and BTB dom 29.7 1E+02 0.0034 19.2 4.7 59 29-92 28-89 (120)
16 2q81_A MIZ-1 protein; BTB/POZ 29.6 65 0.0022 20.4 3.8 54 29-92 30-86 (119)
17 1zav_U 50S ribosomal protein L 28.5 30 0.001 18.4 1.6 13 52-64 18-30 (30)
18 3ohu_A Transcription regulator 26.6 61 0.0021 20.6 3.2 55 29-90 35-93 (125)
19 3drx_A BTB/POZ domain-containi 26.5 89 0.003 23.2 4.5 64 25-91 10-78 (202)
20 4b4u_A Bifunctional protein fo 26.1 1.3E+02 0.0044 23.7 5.6 59 23-92 51-111 (303)
21 1z3x_A Putative cytidyltransfe 25.7 3.6 0.00012 31.8 -3.4 30 21-52 207-236 (238)
22 1yu8_X Villin; alpha helix, 3- 25.7 16 0.00056 22.9 0.2 20 45-64 31-50 (67)
23 1y74_B MLIN-2/CASK, peripheral 24.5 21 0.00072 20.4 0.5 14 45-58 26-39 (50)
24 1ujs_A Actin-binding LIM prote 24.5 22 0.00074 23.5 0.7 20 45-64 46-65 (88)
25 1y6i_A Mg-chelatase cofactor G 23.8 6.7 0.00023 30.2 -2.2 31 21-53 199-229 (233)
26 1buo_A POZ domain, protein (pr 23.1 1.2E+02 0.0041 19.1 4.2 54 29-92 31-87 (121)
27 3pmi_A PWWP domain-containing 22.7 32 0.0011 24.5 1.3 29 36-64 47-78 (134)
28 1qzp_A Dematin; villin headpie 22.3 15 0.0005 23.1 -0.5 19 45-63 32-50 (68)
29 3p2o_A Bifunctional protein fo 22.2 1.1E+02 0.0038 23.7 4.5 56 25-91 33-90 (285)
30 1dd4_C 50S ribosomal protein L 21.4 59 0.002 18.3 2.1 19 52-70 18-36 (40)
31 2k6m_S Supervillin; SVHP, HP, 21.0 18 0.00061 22.7 -0.3 20 45-64 31-50 (67)
32 2ihc_A Transcription regulator 20.3 1.3E+02 0.0044 19.1 3.9 55 29-90 32-90 (124)
No 1
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=63.10 E-value=28 Score=22.58 Aligned_cols=62 Identities=15% Similarity=0.184 Sum_probs=45.5
Q ss_pred ceEEEEeecCCeEEEEeccccC-Ch--HHHHHHHhhhhcCC--CCCCCCeEecCCHHHHHHHHHHHhcCC
Q 041682 27 GFRVMYIGEARQKFVVPIECLS-SV--MFRALLNQFEAKDK--VDGPNPIVLPCSPLMFQWILNLASSKS 91 (108)
Q Consensus 27 G~~aVyVG~e~~RfvVp~~yL~-hp--~F~~LL~~aeeEfG--~~~~G~L~IPC~~~~Fe~vl~~i~~~~ 91 (108)
..+.+-|| .++|.+..+-|. +| .|..|...- .++. .+.+|.+-|-.+...|++||..++.+.
T Consensus 6 ~~v~LNVG--G~~f~t~~~TL~~~p~s~L~~~~~~~-~~~~~~~d~~~~~fiDRdp~~F~~IL~~lr~g~ 72 (107)
T 3drz_A 6 KWVRLNVG--GTYFLTTRQTLCRDPKSFLYRLCQAD-PDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGK 72 (107)
T ss_dssp CEEEEEET--TEEEEEEHHHHTSSTTSHHHHHHTTC-GGGGGGBCTTSCEEECSCHHHHHHHHHHHHHSC
T ss_pred CEEEEEEC--CEEEEECHHHHhcCCCcchhHHHhcC-CCCCcCCCCCceEEecCChHHHHHHHHHhCCCe
Confidence 46778888 479999988664 44 566665432 1232 345699999999999999999998764
No 2
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=57.39 E-value=21 Score=22.06 Aligned_cols=60 Identities=22% Similarity=0.219 Sum_probs=41.8
Q ss_pred EEEEeec--CCeEEEEecccc--CChHHHHHHHhhhhcCCCCCCCCeEec-CCHHHHHHHHHHHhcCCC
Q 041682 29 RVMYIGE--ARQKFVVPIECL--SSVMFRALLNQFEAKDKVDGPNPIVLP-CSPLMFQWILNLASSKSP 92 (108)
Q Consensus 29 ~aVyVG~--e~~RfvVp~~yL--~hp~F~~LL~~aeeEfG~~~~G~L~IP-C~~~~Fe~vl~~i~~~~~ 92 (108)
+.+.||+ +.++|-+.-..| ..|.|+.++...-.|- . ..|.|| .+.+.|+.++.-+=.+.-
T Consensus 11 v~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~---~-~~i~l~~~~~~~f~~~l~~iYt~~~ 75 (109)
T 2vkp_A 11 VHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEV---K-SEIHIPDVEPAAFLILLKYMYSDEI 75 (109)
T ss_dssp EEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC---------C-CEEEETTSCHHHHHHHHHHHHHCCC
T ss_pred EEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccC---C-CeEEeCCCCHHHHHHHHHHHcCCCc
Confidence 3455663 357888888777 6899999997543332 2 678997 699999999998876543
No 3
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=54.65 E-value=20 Score=23.51 Aligned_cols=64 Identities=16% Similarity=0.148 Sum_probs=41.9
Q ss_pred ceEEEEe--ecCCeEEEEeccccCChHHHHHHHhhhhcCCCCCCCCeEe--------cC---CHHHHHHHHHHHhcCCCC
Q 041682 27 GFRVMYI--GEARQKFVVPIECLSSVMFRALLNQFEAKDKVDGPNPIVL--------PC---SPLMFQWILNLASSKSPA 93 (108)
Q Consensus 27 G~~aVyV--G~e~~RfvVp~~yL~hp~F~~LL~~aeeEfG~~~~G~L~I--------PC---~~~~Fe~vl~~i~~~~~~ 93 (108)
|-+.|-+ +++-.|+-||. ...|.+|.++..+-|++..+.++++ || +-.+.+..+.+.+.+...
T Consensus 5 ~~vkvK~~~~gdi~~~~v~~----~i~~~~L~~kv~~~~~~~~~~~f~lky~DEeGD~itisSd~EL~eAl~l~~~n~~~ 80 (89)
T 1vd2_A 5 SQVRVKAYYRGDIMITHFEP----SISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLYELNKDS 80 (89)
T ss_dssp SCEEEEEESSSCEEEEEECT----TCCHHHHHHHHHHHTTCCSSCCEEEEECCSSSCCEECCSHHHHHHHHHHHHHTSCC
T ss_pred CeEEEEEEeCCeEEEEECCC----CCCHHHHHHHHHHHhCCCCCCeEEEEEECCCCCcccccCHHHHHHHHHHHHccCCC
Confidence 3345544 45788888886 5689999999999999865444444 22 344556666666655544
Q ss_pred C
Q 041682 94 D 94 (108)
Q Consensus 94 ~ 94 (108)
.
T Consensus 81 ~ 81 (89)
T 1vd2_A 81 E 81 (89)
T ss_dssp C
T ss_pred C
Confidence 3
No 4
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=53.85 E-value=27 Score=22.00 Aligned_cols=55 Identities=22% Similarity=0.230 Sum_probs=41.4
Q ss_pred EEEEeecCCeEEEEecccc--CChHHHHHHHhhhhcCCCCCCCCeEec---CCHHHHHHHHHHHhcCCC
Q 041682 29 RVMYIGEARQKFVVPIECL--SSVMFRALLNQFEAKDKVDGPNPIVLP---CSPLMFQWILNLASSKSP 92 (108)
Q Consensus 29 ~aVyVG~e~~RfvVp~~yL--~hp~F~~LL~~aeeEfG~~~~G~L~IP---C~~~~Fe~vl~~i~~~~~ 92 (108)
+.+.|| .++|-+.-..| ..|.|+.++... .++.+.|+ .+...|+.++.-+=.+.-
T Consensus 25 v~l~v~--~~~~~aHk~vLaa~S~yF~~~f~~~-------~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~ 84 (116)
T 2vpk_A 25 CTIVIG--EFQFKAHRNVLASFSEYFGAIYRST-------SENNVFLDQSQVKADGFQKLLEFIYTGTL 84 (116)
T ss_dssp EEEEET--TEEEEECHHHHHHHCHHHHHHHTTC-------CCSCEECCTTTCCHHHHHHHHHHHHHSCC
T ss_pred EEEEEC--CEEEeccHHHHhhcCHHHHHHHcCC-------CCCeEEeecCCCCHHHHHHHHHHHcCCCc
Confidence 345565 36777777776 689999999764 34678888 799999999998876543
No 5
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=50.15 E-value=27 Score=22.36 Aligned_cols=58 Identities=21% Similarity=0.325 Sum_probs=43.2
Q ss_pred EEEEeecCCeEEEEecccc--CChHHHHHHHhhhhcCCCCCCCCeEe-c-CCHHHHHHHHHHHhcCCC
Q 041682 29 RVMYIGEARQKFVVPIECL--SSVMFRALLNQFEAKDKVDGPNPIVL-P-CSPLMFQWILNLASSKSP 92 (108)
Q Consensus 29 ~aVyVG~e~~RfvVp~~yL--~hp~F~~LL~~aeeEfG~~~~G~L~I-P-C~~~~Fe~vl~~i~~~~~ 92 (108)
+.+.|| .++|-+.-..| ..|.|+.++...-.| ....|.| + .+...|+.++.-+=.+.-
T Consensus 32 v~l~v~--~~~~~aHk~iLaa~S~~F~~~f~~~~~e----~~~~i~l~~~~~~~~f~~ll~~~Ytg~~ 93 (127)
T 1r29_A 32 VVIVVS--REQFRAHKTVLMACSGLFYSIFTDQLKR----NLSVINLDPEINPEGFNILLDFMYTSRL 93 (127)
T ss_dssp EEEEET--TEEEEECHHHHHHHCHHHHHHHTSTTTT----TCSEEECCTTSCHHHHHHHHHHHHHSCC
T ss_pred EEEEEC--CEEEehHHHHHHHhCHHHHHHhcCCccC----CCCEEEeCCCCCHHHHHHHHHHHcCCCc
Confidence 345555 36777777776 789999999865544 4578999 4 689999999998876543
No 6
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=47.97 E-value=19 Score=24.50 Aligned_cols=63 Identities=16% Similarity=0.190 Sum_probs=44.6
Q ss_pred CCceEEEEeecCCeEEEEecccc-CChHHHHHHHhhhhcCCCC-CCCCeEecCCHHHHHHHHHHHhcCC
Q 041682 25 PKGFRVMYIGEARQKFVVPIECL-SSVMFRALLNQFEAKDKVD-GPNPIVLPCSPLMFQWILNLASSKS 91 (108)
Q Consensus 25 pkG~~aVyVG~e~~RfvVp~~yL-~hp~F~~LL~~aeeEfG~~-~~G~L~IPC~~~~Fe~vl~~i~~~~ 91 (108)
....+.+-|| ..||.+..+-| +.|- .+|..++...-++ .+|.+-|-.+...|+.||..++.+.
T Consensus 11 ~~~~V~LNVG--G~~F~t~~~TL~~~p~--S~L~~~~~~~~~~~~~g~~FiDRdp~~F~~ILnflR~G~ 75 (124)
T 1s1g_A 11 QDELIVLNVS--GRRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGK 75 (124)
T ss_dssp -CCEEEEEET--TEEEEEEHHHHTTSTT--SSTTSSGGGGTBCSSSCSEEECSCHHHHHHHHHHHHHSC
T ss_pred CCCEEEEEeC--CEEEEEeHHHHhcCCC--ceecccCCcccccCCCCcEEEcCChHHHHHHHHHHhcCC
Confidence 4567888888 47999998765 3332 2343344433343 4599999999999999999999864
No 7
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=47.60 E-value=4.5 Score=22.80 Aligned_cols=19 Identities=16% Similarity=0.107 Sum_probs=16.8
Q ss_pred cccCChHHHHHHHhhhhcC
Q 041682 45 ECLSSVMFRALLNQFEAKD 63 (108)
Q Consensus 45 ~yL~hp~F~~LL~~aeeEf 63 (108)
.||+.-.|++++.++.+||
T Consensus 1 ~yLsd~dF~~vFgmsr~eF 19 (37)
T 1und_A 1 XYLSEQDFVSVFGITRGQF 19 (37)
T ss_dssp -CCCHHHHHHHHSSCHHHH
T ss_pred CCCCHHHHHHHHCcCHHHH
Confidence 4899999999999999987
No 8
>2al3_A TUG long isoform; TUG UBL1 insulin, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: d.15.1.2
Probab=46.83 E-value=19 Score=23.88 Aligned_cols=38 Identities=11% Similarity=0.189 Sum_probs=29.0
Q ss_pred EEEEeecCCeEEEEeccccCChHHHHHHHhhhhcCCCCCC
Q 041682 29 RVMYIGEARQKFVVPIECLSSVMFRALLNQFEAKDKVDGP 68 (108)
Q Consensus 29 ~aVyVG~e~~RfvVp~~yL~hp~F~~LL~~aeeEfG~~~~ 68 (108)
-.+++....+|+.|.+ -..-.+.++|++|=+.||++.+
T Consensus 11 ~v~Vl~~n~rr~~VKv--tp~t~L~~VL~eaC~K~gl~~~ 48 (90)
T 2al3_A 11 AVSVLAPNGRRHTVKV--TPSTVLLQVLEDTCRRQDFNPS 48 (90)
T ss_dssp CEEEECTTSCEEEECC--CTTSBHHHHHHHHHHHTTCCGG
T ss_pred EEEEEcCCCcEEEEEE--CCCCCHHHHHHHHHHHhCCChh
Confidence 3444555779999988 3455788999999999999854
No 9
>2xko_C PIPX, global nitrogen regulator; transcription, nitrogen assimilation, CRP/FNR superfamily, 2-oxoglutarate, global nitrogen controller; HET: AKG; 2.25A {Synechococcus elongatus} PDB: 2xg8_D*
Probab=38.86 E-value=3.6 Score=27.59 Aligned_cols=12 Identities=25% Similarity=0.321 Sum_probs=9.1
Q ss_pred cccCChHHHHHH
Q 041682 45 ECLSSVMFRALL 56 (108)
Q Consensus 45 ~yL~hp~F~~LL 56 (108)
.|||||.|.-|-
T Consensus 5 ~YLNHPtFGlLy 16 (89)
T 2xko_C 5 NYLNHPTFGLLY 16 (89)
T ss_dssp CEEEETTTEEEE
T ss_pred ccccCCccchhh
Confidence 499999986543
No 10
>3n5b_B ASR0485 protein; PII, PIPX, transcription regulator, signal transducer; HET: ADP; 1.90A {Nostoc}
Probab=38.08 E-value=4.3 Score=28.25 Aligned_cols=28 Identities=14% Similarity=0.179 Sum_probs=9.8
Q ss_pred cccCCCceEEEEeecCCeEEEEeccccCChHHHHHH
Q 041682 21 RRKVPKGFRVMYIGEARQKFVVPIECLSSVMFRALL 56 (108)
Q Consensus 21 ~~~vpkG~~aVyVG~e~~RfvVp~~yL~hp~F~~LL 56 (108)
+.-||+|.----+..| .|||||.|.-|-
T Consensus 12 ~~~~~~~~~~~~ms~E--------~YLNHPTFGLLy 39 (112)
T 3n5b_B 12 SGLVPRGSHMNPENSE--------TYINHPTWGLLY 39 (112)
T ss_dssp --------------CC--------CEEEETTTEEEE
T ss_pred CCcccCCccCCCcchh--------hhccCCccchhe
Confidence 4567777543333322 399999996554
No 11
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=36.64 E-value=47 Score=21.34 Aligned_cols=53 Identities=28% Similarity=0.374 Sum_probs=40.3
Q ss_pred EEEEeecCCeEEEEecccc--CChHHHHHHHhhhhcCCCCCCCCeEec--CCHHHHHHHHHHHhcC
Q 041682 29 RVMYIGEARQKFVVPIECL--SSVMFRALLNQFEAKDKVDGPNPIVLP--CSPLMFQWILNLASSK 90 (108)
Q Consensus 29 ~aVyVG~e~~RfvVp~~yL--~hp~F~~LL~~aeeEfG~~~~G~L~IP--C~~~~Fe~vl~~i~~~ 90 (108)
+.+.|| .++|-+.-..| ..|.|++++... ....|.|| .+.+.|+.++..+=.+
T Consensus 36 v~l~v~--~~~~~~Hk~vLaa~S~~F~~~f~~~-------~~~~i~l~~~~~~~~f~~ll~~iYtg 92 (129)
T 3ga1_A 36 VSVVVK--GHAFKAHRAVLAASSSYFRDLFNNS-------RSAVVELPAAVQPQSFQQILSFCYTG 92 (129)
T ss_dssp EEEEET--TEEEEECHHHHHHHBHHHHHHHHHC-------CCSEEECCTTCCHHHHHHHHHHHHHS
T ss_pred eEEEEC--CEEEEehHHHHHHcCHHHHHHHcCC-------CCCEEEECCCCCHHHHHHHHHHHhCC
Confidence 455565 36777766655 579999999875 45789997 8999999999987654
No 12
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=35.23 E-value=72 Score=20.18 Aligned_cols=55 Identities=20% Similarity=0.272 Sum_probs=40.3
Q ss_pred EEEEeecCCeEEEEecccc--CChHHHHHHHhhhhcCCCCCCCCeEec-CCHHHHHHHHHHHhcCCC
Q 041682 29 RVMYIGEARQKFVVPIECL--SSVMFRALLNQFEAKDKVDGPNPIVLP-CSPLMFQWILNLASSKSP 92 (108)
Q Consensus 29 ~aVyVG~e~~RfvVp~~yL--~hp~F~~LL~~aeeEfG~~~~G~L~IP-C~~~~Fe~vl~~i~~~~~ 92 (108)
+.+.|| .++|-+.-..| ..|.|+.++... . ++.|.|| .+...|+.++.-+=.+.-
T Consensus 27 v~l~v~--~~~f~aHk~vLaa~S~yF~~~f~~~-----~--~~~i~l~~~~~~~f~~ll~~iYtg~~ 84 (119)
T 3b84_A 27 ATLDVG--GLVFKAHWSVLACCSHFFQSLYGDG-----S--GGSVVLPAGFAEIFGLLLDFFYTGHL 84 (119)
T ss_dssp EEEEET--TEEEEECHHHHHHHCHHHHHHHTTT-----T--CCCEEECGGGHHHHHHHHHHHHHSCC
T ss_pred eEEEEC--CEEEEeeHHHHhhcCHHHHHHHCCC-----C--CCeEEeCCCCHHHHHHHHHHHcCCCC
Confidence 345555 36777776666 589999999763 2 5789998 578999999998876543
No 13
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=32.18 E-value=31 Score=23.93 Aligned_cols=63 Identities=16% Similarity=0.190 Sum_probs=45.0
Q ss_pred CCceEEEEeecCCeEEEEecccc-CChHHHHHHHhhhhcCCCC-CCCCeEecCCHHHHHHHHHHHhcCC
Q 041682 25 PKGFRVMYIGEARQKFVVPIECL-SSVMFRALLNQFEAKDKVD-GPNPIVLPCSPLMFQWILNLASSKS 91 (108)
Q Consensus 25 pkG~~aVyVG~e~~RfvVp~~yL-~hp~F~~LL~~aeeEfG~~-~~G~L~IPC~~~~Fe~vl~~i~~~~ 91 (108)
....+.+-|| ..||.+..+-| ++|- .+|..++...-|+ .+|.+-|-.|...|++||..++.+.
T Consensus 33 ~~~~V~LNVG--G~~F~T~~~TL~~~P~--S~L~~~~~~~~~~~~~g~yFiDRdp~~F~~ILnflR~G~ 97 (140)
T 2nz0_B 33 QDELIVLNVS--GRRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGK 97 (140)
T ss_dssp CCCEEEEEET--TEEEEEEHHHHHTCTT--STTTSGGGGGSEETTTTEEEECSCHHHHHHHHHHHHHSS
T ss_pred CCCEEEEEEC--CEEEEeeHHHHhcCCC--eeecccCCcccccCCCCeEEEeCCcHHHHHHHHHHhcCC
Confidence 4567888888 47999988755 3442 2333344333343 4599999999999999999999864
No 14
>1w8x_N Protein P31, protein C, GPC; virus, P3 major capsid protein, P30 TAPE measure, P31 penton protein, P16 membrane protein; 4.20A {Enterobacteria phage PRD1} SCOP: i.6.1.1
Probab=31.63 E-value=12 Score=26.19 Aligned_cols=29 Identities=28% Similarity=0.462 Sum_probs=17.5
Q ss_pred CCCceEEEEeecCCeEEE----------EeccccCChHHH
Q 041682 24 VPKGFRVMYIGEARQKFV----------VPIECLSSVMFR 53 (108)
Q Consensus 24 vpkG~~aVyVG~e~~Rfv----------Vp~~yL~hp~F~ 53 (108)
=..||+|+.|- .+-.|+ +|+-|||.|+-+
T Consensus 85 G~QGYfPlL~~-~~~KFv~~~~~~GKks~P~~FlNF~IA~ 123 (126)
T 1w8x_N 85 GKQGYFPLLVP-GRAKFVARHLGSGKKSVPLFFLNFTIAQ 123 (126)
T ss_dssp CCCSSCCEEEC-CSSSSEEEEEEEESSCCCCSCCC-----
T ss_pred CCcccceeecc-chhhhhhhhhcCCCcceeeEEEeceeee
Confidence 35799999995 334444 688899988754
No 15
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=29.68 E-value=1e+02 Score=19.25 Aligned_cols=59 Identities=17% Similarity=0.209 Sum_probs=40.6
Q ss_pred EEEEeecCCeEEEEecccc--CChHHHHHHHhhhhcCCCCCCCCeEec-CCHHHHHHHHHHHhcCCC
Q 041682 29 RVMYIGEARQKFVVPIECL--SSVMFRALLNQFEAKDKVDGPNPIVLP-CSPLMFQWILNLASSKSP 92 (108)
Q Consensus 29 ~aVyVG~e~~RfvVp~~yL--~hp~F~~LL~~aeeEfG~~~~G~L~IP-C~~~~Fe~vl~~i~~~~~ 92 (108)
+.+.|| .++|-+.-..| ..|.|+.++...-.| .....|.|+ .+.+.|+.++.-+=.+.-
T Consensus 28 v~l~v~--~~~~~aHk~vLaa~S~~F~~~f~~~~~e---~~~~~i~l~~~~~~~f~~ll~~~Yt~~~ 89 (120)
T 2if5_A 28 VVILVE--GREFPTHRSVLAACSQYFKKLFTSGAVV---DQQNVYEIDFVSAEALTALMDFAYTATL 89 (120)
T ss_dssp EEEEET--TEEEEECHHHHHHHCHHHHHHHHC--------CCSEEECCSSCHHHHHHHHHHHHHSCC
T ss_pred eEEEEC--CEEEeHHHHHHHHhCHHHHHHhcCCccc---cCCceEEeCCCCHHHHHHHHHHHcCCCC
Confidence 345555 36777776666 589999999753222 234678998 589999999998876553
No 16
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=29.57 E-value=65 Score=20.40 Aligned_cols=54 Identities=13% Similarity=0.143 Sum_probs=39.8
Q ss_pred EEEEeecCCeEEEEecccc--CChHHHHHHHhhhhcCCCCCCCCeEecC-CHHHHHHHHHHHhcCCC
Q 041682 29 RVMYIGEARQKFVVPIECL--SSVMFRALLNQFEAKDKVDGPNPIVLPC-SPLMFQWILNLASSKSP 92 (108)
Q Consensus 29 ~aVyVG~e~~RfvVp~~yL--~hp~F~~LL~~aeeEfG~~~~G~L~IPC-~~~~Fe~vl~~i~~~~~ 92 (108)
+.+.|| .++|-+.-..| ..|.|++++.. ++..+.|+- +.+.|+.++..+=.+.-
T Consensus 30 v~l~v~--~~~~~aHk~vLaa~S~yF~~~f~~--------~~~~i~l~~~~~~~f~~ll~~~Ytg~~ 86 (119)
T 2q81_A 30 CTFVVD--GVHFKAHKAVLAACSEYFKMLFVD--------QKDVVHLDISNAAGLGQVLEFMYTAKL 86 (119)
T ss_dssp EEEEET--TEEEEECHHHHHHHCHHHHHHHHH--------CCSGGGGGGCCHHHHHHHHHHHHHSCC
T ss_pred eEEEEC--CEEEehhHHHHHHcCHHHHHHHcC--------CCCEEEeCCCCHHHHHHHHHHHcCCCC
Confidence 345565 36787777776 58999999985 235677775 78999999998876543
No 17
>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C
Probab=28.51 E-value=30 Score=18.43 Aligned_cols=13 Identities=23% Similarity=0.319 Sum_probs=10.5
Q ss_pred HHHHHHhhhhcCC
Q 041682 52 FRALLNQFEAKDK 64 (108)
Q Consensus 52 F~~LL~~aeeEfG 64 (108)
..+|.+..||+||
T Consensus 18 l~eLvk~lEe~fG 30 (30)
T 1zav_U 18 LAELVKKLEDKFG 30 (30)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhC
Confidence 4678888899998
No 18
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=26.58 E-value=61 Score=20.56 Aligned_cols=55 Identities=20% Similarity=0.211 Sum_probs=40.0
Q ss_pred EEEEeecCCeEEEEecccc--CChHHHHHHHhhhhcCCCCCCCCeEec--CCHHHHHHHHHHHhcC
Q 041682 29 RVMYIGEARQKFVVPIECL--SSVMFRALLNQFEAKDKVDGPNPIVLP--CSPLMFQWILNLASSK 90 (108)
Q Consensus 29 ~aVyVG~e~~RfvVp~~yL--~hp~F~~LL~~aeeEfG~~~~G~L~IP--C~~~~Fe~vl~~i~~~ 90 (108)
+.+.|| .++|-+.-..| ..|.|++++.....| ...|.|| .+...|+.++.-+=.+
T Consensus 35 v~l~v~--~~~f~aHk~vLaa~S~yF~~~f~~~~~e-----~~~i~l~~~~~~~~f~~~l~~iYtg 93 (125)
T 3ohu_A 35 VTLIVE--RKEFRAHRAVLAACSEYFWQALVGQTKN-----DLVVSLPEEVTARGFGPLLQFAYTA 93 (125)
T ss_dssp EEEEET--TEEEEECHHHHHHHBHHHHHHHTTCCCS-----SCEEECCTTCCHHHHHHHHHHHTTS
T ss_pred eEEEEC--CEEEechHHHHHHcCHHHHHHhcCCCCC-----CcEEEeCCCCCHHHHHHHHHhHcCC
Confidence 445565 35777766666 479999999765333 4678887 7999999999988654
No 19
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=26.47 E-value=89 Score=23.20 Aligned_cols=64 Identities=14% Similarity=0.207 Sum_probs=46.1
Q ss_pred CCceEEEEeecCCeEEEEeccccC-Ch--HHHHHHHhhhhcCC--CCCCCCeEecCCHHHHHHHHHHHhcCC
Q 041682 25 PKGFRVMYIGEARQKFVVPIECLS-SV--MFRALLNQFEAKDK--VDGPNPIVLPCSPLMFQWILNLASSKS 91 (108)
Q Consensus 25 pkG~~aVyVG~e~~RfvVp~~yL~-hp--~F~~LL~~aeeEfG--~~~~G~L~IPC~~~~Fe~vl~~i~~~~ 91 (108)
+...+.+-|| ..||.+..+-|. +| .|..|+.. ..++. .+.+|.+-|-.+...|++||..++.+.
T Consensus 10 ~~~~V~LNVG--G~~F~Tt~sTL~r~PdS~L~~lfs~-~~~~~~~~De~geyFIDRDP~~F~~ILnyLRtG~ 78 (202)
T 3drx_A 10 VSKWVRLNVG--GTYFLTTRQTLCRDPKSFLYRLCQA-DPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGK 78 (202)
T ss_dssp CCCEEEEEET--TEEEEEETTGGGSCTTSSTHHHHSC-CCC----BCTTCCEEECSCSTTHHHHHHHHHHSC
T ss_pred CCCEEEEEEC--CEEEEEeHHHHhCCCcchHHHHhcC-ccccCcccCCCccEEecCChHHHHHHHHHhcCCc
Confidence 3467888898 479999988764 44 56666432 11332 345699999999999999999999764
No 20
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=26.14 E-value=1.3e+02 Score=23.69 Aligned_cols=59 Identities=10% Similarity=0.093 Sum_probs=37.7
Q ss_pred cCCCceEEEEeecCCeEEEEeccccCChHHHHHHHhhhhcCCCCCCCCeEec--CCHHHHHHHHHHHhcCCC
Q 041682 23 KVPKGFRVMYIGEARQKFVVPIECLSSVMFRALLNQFEAKDKVDGPNPIVLP--CSPLMFQWILNLASSKSP 92 (108)
Q Consensus 23 ~vpkG~~aVyVG~e~~RfvVp~~yL~hp~F~~LL~~aeeEfG~~~~G~L~IP--C~~~~Fe~vl~~i~~~~~ 92 (108)
..+.|...|.||++ |. .-.....-.++.+|.|+... .+.+| ++.+++...+..++.+..
T Consensus 51 g~~P~LavIlVG~d------pa----S~~Yv~~K~k~c~~vGi~s~-~~~lp~~~se~ell~~I~~LN~D~~ 111 (303)
T 4b4u_A 51 GRTPILATILVGDD------GA----SATYVRMKGNACRRVGMDSL-KIELPQETTTEQLLAEIEKLNANPD 111 (303)
T ss_dssp SCCCEEEEEEESCC------HH----HHHHHHHHHHHHHHTTCEEE-EEEECTTCCHHHHHHHHHHHHTCTT
T ss_pred CCCCcEEEEEeCCC------HH----HHHHHHHHHHHHHHcCCeEE-EEecCccCCHHHHHHHHHHhcCCCC
Confidence 46678999999975 21 11234555677777787753 45565 566777777776666544
No 21
>1z3x_A Putative cytidyltransferase; transferase activator; 1.50A {Thermosynechococcus elongatus} SCOP: a.118.1.22 a.261.1.1 PDB: 1z3y_A
Probab=25.72 E-value=3.6 Score=31.81 Aligned_cols=30 Identities=13% Similarity=0.080 Sum_probs=19.1
Q ss_pred cccCCCceEEEEeecCCeEEEEeccccCChHH
Q 041682 21 RRKVPKGFRVMYIGEARQKFVVPIECLSSVMF 52 (108)
Q Consensus 21 ~~~vpkG~~aVyVG~e~~RfvVp~~yL~hp~F 52 (108)
+...|+||+|+.-. .+=.-|=-+.|+||.|
T Consensus 207 sl~AP~GHLP~~~~--lrGv~l~~~ll~hpa~ 236 (238)
T 1z3x_A 207 DLSAPRGHLPLTNQ--LRGVQVLNALLNHPAW 236 (238)
T ss_dssp STTSCTTCCSCCCC--TTCSHHHHHHHTCGGG
T ss_pred eCCCCCCCCCcCcc--cccHHHHHHHHcCccc
Confidence 34689999998642 1111244568888876
No 22
>1yu8_X Villin; alpha helix, 3-10 helix, structural protein; 1.45A {Gallus gallus} SCOP: a.14.1.1 PDB: 1qqv_A 1yu5_X 2rjx_A 2rjy_A 1yu7_X 2rjv_A 2rjw_A 3nkj_A 3myc_A 3mya_A 3mye_X 1unc_A
Probab=25.69 E-value=16 Score=22.92 Aligned_cols=20 Identities=20% Similarity=0.180 Sum_probs=18.3
Q ss_pred cccCChHHHHHHHhhhhcCC
Q 041682 45 ECLSSVMFRALLNQFEAKDK 64 (108)
Q Consensus 45 ~yL~hp~F~~LL~~aeeEfG 64 (108)
.||+.-.|++++.++.+||-
T Consensus 31 ~yLsdedF~~vFgms~~eF~ 50 (67)
T 1yu8_X 31 NHLSDEDFKAVFGMTRSAFA 50 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHHH
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999983
No 23
>1y74_B MLIN-2/CASK, peripheral plasma membrane protein CASK; L27 domain, scaffold protein, protein assembly, cell polarity, transport protein; NMR {Mus musculus} SCOP: a.194.1.1 PDB: 1zl8_B
Probab=24.52 E-value=21 Score=20.40 Aligned_cols=14 Identities=36% Similarity=0.437 Sum_probs=11.7
Q ss_pred cccCChHHHHHHHh
Q 041682 45 ECLSSVMFRALLNQ 58 (108)
Q Consensus 45 ~yL~hp~F~~LL~~ 58 (108)
..|+.|-|++||+-
T Consensus 26 ~lL~~PHfqaLl~a 39 (50)
T 1y74_B 26 RILTQPHFMALLQT 39 (50)
T ss_dssp HHHHSHHHHHHHHH
T ss_pred HHHcCHHHHHHHHH
Confidence 46889999999964
No 24
>1ujs_A Actin-binding LIM protein homologue; VHP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 2l3x_A
Probab=24.51 E-value=22 Score=23.53 Aligned_cols=20 Identities=15% Similarity=0.056 Sum_probs=18.5
Q ss_pred cccCChHHHHHHHhhhhcCC
Q 041682 45 ECLSSVMFRALLNQFEAKDK 64 (108)
Q Consensus 45 ~yL~hp~F~~LL~~aeeEfG 64 (108)
.||+.-.|++++.++.+||-
T Consensus 46 ~YLSdedF~~vFgMsr~eF~ 65 (88)
T 1ujs_A 46 RHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGSCTTHHHHHHSSCHHHHT
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 59999999999999999984
No 25
>1y6i_A Mg-chelatase cofactor GUN4; helix-bundle, porphyrin binding, ligand binding protein; 1.78A {Synechocystis SP} SCOP: a.118.1.22 a.261.1.1
Probab=23.76 E-value=6.7 Score=30.16 Aligned_cols=31 Identities=10% Similarity=0.084 Sum_probs=20.2
Q ss_pred cccCCCceEEEEeecCCeEEEEeccccCChHHH
Q 041682 21 RRKVPKGFRVMYIGEARQKFVVPIECLSSVMFR 53 (108)
Q Consensus 21 ~~~vpkG~~aVyVG~e~~RfvVp~~yL~hp~F~ 53 (108)
+..+|+||+|+.-.=-.-| |=-+.|+||.|.
T Consensus 199 ~l~AP~GHLP~~~~lrG~~--l~~~ll~hpa~~ 229 (233)
T 1y6i_A 199 DLSAPQGHLPLLNQLRGVR--VAESLYRHPVWS 229 (233)
T ss_dssp STTSCTTCCSCCCCTTCTH--HHHHHHTSTHHH
T ss_pred eCCCCCCCCCCccccchHH--HHHHHHCCcccc
Confidence 3468999999865211112 445688999884
No 26
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=23.11 E-value=1.2e+02 Score=19.08 Aligned_cols=54 Identities=30% Similarity=0.390 Sum_probs=39.8
Q ss_pred EEEEeecCCeEEEEecccc--CChHHHHHHHhhhhcCCCCCCCCeEec-CCHHHHHHHHHHHhcCCC
Q 041682 29 RVMYIGEARQKFVVPIECL--SSVMFRALLNQFEAKDKVDGPNPIVLP-CSPLMFQWILNLASSKSP 92 (108)
Q Consensus 29 ~aVyVG~e~~RfvVp~~yL--~hp~F~~LL~~aeeEfG~~~~G~L~IP-C~~~~Fe~vl~~i~~~~~ 92 (108)
+.+.|| .++|-+.-..| ..|.|++++.. ....+.|+ .+.+.|+.++.-+=.+.-
T Consensus 31 v~l~v~--~~~f~aHk~vLaa~S~yF~~~f~~--------~~~~i~l~~~~~~~f~~ll~~~Ytg~~ 87 (121)
T 1buo_A 31 VVIMVD--SQEFHAHRTVLACTSKMFEILFHR--------NSQHYTLDFLSPKTFQQILEYAYTATL 87 (121)
T ss_dssp EEEEES--SCEEEECHHHHHHHCHHHHHHTTS--------CCSEEEECSSCHHHHHHHHHHHHHSCC
T ss_pred EEEEEC--CEEEehhHHHHhhcCHHHHHHHcC--------CCcEEEeCCCCHHHHHHHHHhhcCCCc
Confidence 345565 35777776666 78999999864 24578888 799999999998876654
No 27
>3pmi_A PWWP domain-containing protein MUM1; structural genomics consortium, SGC, protein binding, nucLeu; HET: UNL; 2.82A {Homo sapiens}
Probab=22.70 E-value=32 Score=24.47 Aligned_cols=29 Identities=24% Similarity=0.250 Sum_probs=25.3
Q ss_pred CCeEEEEeccccCC---hHHHHHHHhhhhcCC
Q 041682 36 ARQKFVVPIECLSS---VMFRALLNQFEAKDK 64 (108)
Q Consensus 36 e~~RfvVp~~yL~h---p~F~~LL~~aeeEfG 64 (108)
+++=|.||+.-|+| -.-++|+++|.|.||
T Consensus 47 ekrGi~V~LrrLK~fDC~ek~~L~~rAre~Y~ 78 (134)
T 3pmi_A 47 KMKGFTVSLKSLKHFDCKEKQTLLNQAREDFN 78 (134)
T ss_dssp TSCCEEEEGGGCEETTSTTHHHHHHHHTTTCH
T ss_pred ccCceEeEcccCCCCChHhHHHHHHHHHHHhc
Confidence 67889999998876 458999999999998
No 28
>1qzp_A Dematin; villin headpiece, actin binding domain, protein binding; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 1zv6_A
Probab=22.27 E-value=15 Score=23.08 Aligned_cols=19 Identities=16% Similarity=0.065 Sum_probs=17.6
Q ss_pred cccCChHHHHHHHhhhhcC
Q 041682 45 ECLSSVMFRALLNQFEAKD 63 (108)
Q Consensus 45 ~yL~hp~F~~LL~~aeeEf 63 (108)
.||+.-.|++++.++.+||
T Consensus 32 ~yLsdedF~~vFgmsr~eF 50 (68)
T 1qzp_A 32 RHLSAEDFSRVFAMSPEEF 50 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 6999999999999999987
No 29
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=22.24 E-value=1.1e+02 Score=23.69 Aligned_cols=56 Identities=9% Similarity=0.086 Sum_probs=37.2
Q ss_pred CCceEEEEeecCCeEEEEeccccCChHHHHHHHhhhhcCCCCCCCCeEec--CCHHHHHHHHHHHhcCC
Q 041682 25 PKGFRVMYIGEARQKFVVPIECLSSVMFRALLNQFEAKDKVDGPNPIVLP--CSPLMFQWILNLASSKS 91 (108)
Q Consensus 25 pkG~~aVyVG~e~~RfvVp~~yL~hp~F~~LL~~aeeEfG~~~~G~L~IP--C~~~~Fe~vl~~i~~~~ 91 (108)
+.|...|.||++ |.+ -....--.++.++.|+... .+.+| ++.+++...+..+..+.
T Consensus 33 ~P~Lavilvg~d------paS----~~Yv~~k~k~~~~~Gi~~~-~~~lp~~~s~~ell~~I~~lN~d~ 90 (285)
T 3p2o_A 33 ESCLAVILVGDN------PAS----QTYVKSKAKACEECGIKSL-VYHLNENITQNELLALINTLNHDD 90 (285)
T ss_dssp CCEEEEEEESCC------HHH----HHHHHHHHHHHHHHTCEEE-EEEECTTCCHHHHHHHHHHHHHCT
T ss_pred CCeEEEEEeCCC------HHH----HHHHHHHHHHHHHcCCeEE-EEECCCCCCHHHHHHHHHHHhCCC
Confidence 668889999965 211 1234456677777887753 56777 77777777777776654
No 30
>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1
Probab=21.41 E-value=59 Score=18.28 Aligned_cols=19 Identities=26% Similarity=0.420 Sum_probs=14.7
Q ss_pred HHHHHHhhhhcCCCCCCCC
Q 041682 52 FRALLNQFEAKDKVDGPNP 70 (108)
Q Consensus 52 F~~LL~~aeeEfG~~~~G~ 70 (108)
..+|.+..||+||.+.-.+
T Consensus 18 ~~eLvk~leekfGVsaaa~ 36 (40)
T 1dd4_C 18 LAELVKKLEDKFGVTAAAP 36 (40)
T ss_dssp HHHHHHHHHHHTCCCSCC-
T ss_pred HHHHHHHHHHHHCCCcccc
Confidence 4688999999999886433
No 31
>2k6m_S Supervillin; SVHP, HP, headpiece, archvillin, actin capping, actin-binding, alternative splicing, calcium, cytoplasm, cytoskeleton, membrane; NMR {Homo sapiens} PDB: 2k6n_A
Probab=20.98 E-value=18 Score=22.68 Aligned_cols=20 Identities=15% Similarity=0.071 Sum_probs=18.4
Q ss_pred cccCChHHHHHHHhhhhcCC
Q 041682 45 ECLSSVMFRALLNQFEAKDK 64 (108)
Q Consensus 45 ~yL~hp~F~~LL~~aeeEfG 64 (108)
.||+.-.|++++.++.+||-
T Consensus 31 ~yLsdedF~~vFgmsr~eF~ 50 (67)
T 2k6m_S 31 IYLTDEDFEFALDMTRDEYN 50 (67)
T ss_dssp GGSCHHHHHHHTSSCHHHHT
T ss_pred hhCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999984
No 32
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=20.29 E-value=1.3e+02 Score=19.09 Aligned_cols=55 Identities=20% Similarity=0.292 Sum_probs=38.0
Q ss_pred EEEEeecCCeEEEEecccc--CChHHHHHHHhhhhcCCCCCCCCeEec--CCHHHHHHHHHHHhcC
Q 041682 29 RVMYIGEARQKFVVPIECL--SSVMFRALLNQFEAKDKVDGPNPIVLP--CSPLMFQWILNLASSK 90 (108)
Q Consensus 29 ~aVyVG~e~~RfvVp~~yL--~hp~F~~LL~~aeeEfG~~~~G~L~IP--C~~~~Fe~vl~~i~~~ 90 (108)
+.+.|| .++|-+.-..| ..|.|+.++..... ....+.|| .+...|+.++.-+=.+
T Consensus 32 v~l~v~--~~~~~aHk~vLaa~S~yF~~mf~~~~~-----e~~~i~l~~~v~~~~f~~lL~~iYtg 90 (124)
T 2ihc_A 32 VTIFVE--GQRFRAHRSVLAACSSYFHSRIVGQAD-----GELNITLPEEVTVKGFEPLIQFAYTA 90 (124)
T ss_dssp EEEEET--TEEEEECHHHHHHHBHHHHHHHTTC--------CEEEECCTTSCHHHHHHHHHHHHHS
T ss_pred EEEEEC--CEEEecHHHHHHHcCHHHHHHHcCCCC-----CCceEeecCCcCHHHHHHHHHHhcCC
Confidence 345555 36777776666 68999999975432 23568885 7899999999887654
Done!