Query 041683
Match_columns 743
No_of_seqs 754 out of 4310
Neff 10.2
Searched_HMMs 13730
Date Mon Mar 25 16:20:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041683.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/041683hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 4E-32 2.9E-36 277.9 19.7 259 328-635 50-313 (313)
2 d2omza2 c.10.2.1 (A:33-416) In 100.0 9.3E-27 6.8E-31 245.6 31.5 208 329-601 176-383 (384)
3 d2omza2 c.10.2.1 (A:33-416) In 100.0 6.5E-26 4.7E-30 239.0 35.2 52 522-577 332-383 (384)
4 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 4.1E-28 3E-32 247.9 17.0 236 323-608 71-310 (313)
5 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 4.8E-25 3.5E-29 221.3 17.5 228 333-610 16-244 (284)
6 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 8.2E-25 6E-29 219.6 17.6 251 328-628 32-283 (284)
7 d1xkua_ c.10.2.7 (A:) Decorin 99.9 9.4E-24 6.8E-28 214.4 25.4 227 122-418 32-259 (305)
8 d1xkua_ c.10.2.7 (A:) Decorin 99.9 6.1E-23 4.5E-27 208.3 28.3 63 396-462 146-208 (305)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.9 3.1E-23 2.2E-27 205.5 20.0 203 352-608 10-212 (266)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.9 9.1E-22 6.6E-26 194.7 20.3 201 327-581 9-209 (266)
11 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 3.8E-17 2.8E-21 168.8 30.8 219 122-438 39-257 (353)
12 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 1.3E-16 9.1E-21 164.9 34.1 138 122-279 99-236 (353)
13 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 2.3E-20 1.6E-24 201.1 5.0 63 521-583 371-442 (460)
14 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 1.2E-20 8.8E-25 203.3 2.3 238 327-606 168-441 (460)
15 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.8 1.4E-18 1E-22 169.3 14.6 213 3-225 17-232 (242)
16 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.8 2.9E-18 2.1E-22 167.0 14.2 202 329-600 30-234 (242)
17 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 6.7E-18 4.9E-22 162.4 16.1 205 331-600 22-226 (227)
18 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 5.8E-17 4.3E-21 155.7 18.6 187 327-576 40-226 (227)
19 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 7.8E-18 5.7E-22 156.9 9.6 101 522-625 81-181 (192)
20 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 7.6E-17 5.5E-21 152.4 16.3 165 16-202 44-208 (210)
21 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.6E-16 1.1E-20 148.9 17.6 163 15-199 37-199 (199)
22 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 2.4E-17 1.7E-21 153.6 11.7 85 522-606 57-141 (192)
23 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 1.6E-16 1.2E-20 150.1 15.6 180 334-600 30-209 (210)
24 d2omxa2 c.10.2.1 (A:37-235) In 99.6 1.6E-15 1.1E-19 142.0 17.5 169 17-207 17-185 (199)
25 d2astb2 c.10.1.3 (B:2136-2419) 99.6 2.1E-15 1.5E-19 149.6 9.0 227 330-606 25-261 (284)
26 d2astb2 c.10.1.3 (B:2136-2419) 99.6 8.3E-15 6E-19 145.2 12.9 248 21-281 3-260 (284)
27 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.5 9.1E-16 6.6E-20 157.5 1.4 242 324-606 27-317 (344)
28 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 3.2E-14 2.3E-18 127.3 10.8 89 13-106 13-101 (162)
29 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 4.5E-14 3.3E-18 126.3 9.3 125 327-455 17-145 (162)
30 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.5 7.3E-14 5.3E-18 143.0 10.7 137 144-280 157-315 (344)
31 d1dcea3 c.10.2.2 (A:444-567) R 99.4 8.7E-13 6.3E-17 111.7 12.7 78 21-105 1-78 (124)
32 d1dcea3 c.10.2.2 (A:444-567) R 99.4 6.2E-13 4.5E-17 112.7 11.5 102 331-438 1-103 (124)
33 d2ifga3 c.10.2.7 (A:36-191) Hi 99.3 1.4E-11 1E-15 108.9 11.4 86 521-607 33-119 (156)
34 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 2E-13 1.5E-17 126.5 -0.9 115 415-581 39-154 (198)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 99.2 1.3E-11 9.5E-16 109.2 9.3 107 329-438 9-116 (156)
36 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 8.2E-13 5.9E-17 122.4 0.4 127 19-158 24-153 (198)
37 d1koha1 c.10.2.3 (A:201-362) m 98.3 1.9E-08 1.4E-12 89.1 -2.5 121 329-455 23-152 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 98.2 5.2E-08 3.8E-12 86.2 -1.9 105 353-463 23-129 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.8 2.3E-05 1.6E-09 69.0 8.7 110 65-179 13-141 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.6 1.5E-05 1.1E-09 70.1 3.6 86 327-412 14-112 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 97.2 0.00024 1.7E-08 62.1 6.6 115 65-180 15-143 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 96.9 0.0002 1.4E-08 62.7 2.8 63 327-389 16-87 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.98 E-value=4e-32 Score=277.91 Aligned_cols=259 Identities=32% Similarity=0.553 Sum_probs=238.7
Q ss_pred CCccEEECcCCcCcc--cCCccccCCCCCCEEECCC-CcCcccCCccccCCCCCcEEEccCccccccCCcccCCCCCCCE
Q 041683 328 NNIEFLKLSKNNFSG--DIPDCWMNWLRLRALNLGH-NNFTGSLPMSIGTLSSLLSLNLRNNILSGIIPTSFKNFSSLEV 404 (743)
Q Consensus 328 ~~L~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 404 (743)
.+++.|+|++|.+.+ .+|..+..+++|++|+|++ |.+++.+|..|.++++|++|++++|++.+..+..+..+.+|+.
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 469999999999987 4789999999999999996 8899899999999999999999999999999999999999999
Q ss_pred EeCCCCcCcccCchhHHhcccCCcEEEccCCcCcccCCccccCCCCc-cEEEccCCccccccCccccccccccccCccch
Q 041683 405 LDLGENELVGSIPSWIGERFSILKILNLRSNKFHGDFPIQLCGLAFL-QILDVASNSLSGTIPRCINNLSAMAITDSYDQ 483 (743)
Q Consensus 405 L~Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~ 483 (743)
+++++|.+.+.+|..+. .++.++.+++++|.+.+.+|..+..+..+ +.+++++|++++..|..+..+..
T Consensus 130 l~l~~N~~~~~~p~~l~-~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~--------- 199 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSIS-SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNL--------- 199 (313)
T ss_dssp EECCSSEEESCCCGGGG-GCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCC---------
T ss_pred cccccccccccCchhhc-cCcccceeecccccccccccccccccccccccccccccccccccccccccccc---------
Confidence 99999999988888876 79999999999999999999999888876 89999999999988887765543
Q ss_pred hhhhhccccCCCCcccccccceeeeceeeehhcccccccEEEccCCcCcccCchhhcccCCCCEEeCCCCcCcccCCCCC
Q 041683 484 AVILYSSLRSEGQSEIFEDASLVMKGVLVEYNSILNLVRSIDVSKNIFSGEIPVEVTNLQGLQSLNLSHNLLTGRIPDNI 563 (743)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 563 (743)
..++++++...+.+|..+..+++|+.+++++|.+.+.+| .+
T Consensus 200 --------------------------------------~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~ 240 (313)
T d1ogqa_ 200 --------------------------------------AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KV 240 (313)
T ss_dssp --------------------------------------SEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GC
T ss_pred --------------------------------------ccccccccccccccccccccccccccccccccccccccc-cc
Confidence 569999999999999999999999999999999997765 58
Q ss_pred CCCCCccEEECcCCcCCCCCCccccCcCCCCeeeCcCCcccccCCCCcccCCCCCccccCC-CCCCCCCCCCC
Q 041683 564 GVMRSIESLDLSANQLSGQIPQSMSNLSFLNHLNLSNNNLVGKIPSSTQLQSFGASSFAGN-DLCGDPLSNCT 635 (743)
Q Consensus 564 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~n-~l~~~~~~~c~ 635 (743)
+.+++|+.|+|++|++++.+|+.+.++++|++|||++|+++|.+|..+.++.++.+++.|| .+||.|++.|+
T Consensus 241 ~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l~g~plp~c~ 313 (313)
T d1ogqa_ 241 GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLPACT 313 (313)
T ss_dssp CCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSSCCC
T ss_pred ccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCccccCCCCCCCC
Confidence 8899999999999999999999999999999999999999999999888999999999999 69999988884
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.95 E-value=9.3e-27 Score=245.58 Aligned_cols=208 Identities=26% Similarity=0.370 Sum_probs=148.5
Q ss_pred CccEEECcCCcCcccCCccccCCCCCCEEECCCCcCcccCCccccCCCCCcEEEccCccccccCCcccCCCCCCCEEeCC
Q 041683 329 NIEFLKLSKNNFSGDIPDCWMNWLRLRALNLGHNNFTGSLPMSIGTLSSLLSLNLRNNILSGIIPTSFKNFSSLEVLDLG 408 (743)
Q Consensus 329 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls 408 (743)
.........|... ....+..+++++.+++++|.+++..| +..+++|++|++++|.++.. ..+..+++|+.++++
T Consensus 176 ~~~~~~~~~~~~~--~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~ 249 (384)
T d2omza2 176 TLERLDISSNKVS--DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLA 249 (384)
T ss_dssp TCCEEECCSSCCC--CCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECC
T ss_pred ccccccccccccc--cccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCCc--chhhcccccchhccc
Confidence 3444444444433 33456677778888888887775433 45567788888888877743 356777888888888
Q ss_pred CCcCcccCchhHHhcccCCcEEEccCCcCcccCCccccCCCCccEEEccCCccccccCccccccccccccCccchhhhhh
Q 041683 409 ENELVGSIPSWIGERFSILKILNLRSNKFHGDFPIQLCGLAFLQILDVASNSLSGTIPRCINNLSAMAITDSYDQAVILY 488 (743)
Q Consensus 409 ~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~~~~~~ 488 (743)
+|.+.+ ++. + ..+++|++|++++|++.+.. .+..++.++.+++++|.+.+. ..+..
T Consensus 250 ~n~l~~-~~~-~-~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~--~~~~~----------------- 305 (384)
T d2omza2 250 NNQISN-LAP-L-SGLTKLTELKLGANQISNIS--PLAGLTALTNLELNENQLEDI--SPISN----------------- 305 (384)
T ss_dssp SSCCCC-CGG-G-TTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSCC--GGGGG-----------------
T ss_pred cCccCC-CCc-c-cccccCCEeeccCcccCCCC--ccccccccccccccccccccc--cccch-----------------
Confidence 888773 433 2 25778888888888877443 366777888888888877632 11222
Q ss_pred ccccCCCCcccccccceeeeceeeehhcccccccEEEccCCcCcccCchhhcccCCCCEEeCCCCcCcccCCCCCCCCCC
Q 041683 489 SSLRSEGQSEIFEDASLVMKGVLVEYNSILNLVRSIDVSKNIFSGEIPVEVTNLQGLQSLNLSHNLLTGRIPDNIGVMRS 568 (743)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 568 (743)
++.++.|++++|++++.. .+..+++|++|++++|++++ ++ .++.+++
T Consensus 306 -----------------------------~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~ 352 (384)
T d2omza2 306 -----------------------------LKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD-VS-SLANLTN 352 (384)
T ss_dssp -----------------------------CTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-CG-GGGGCTT
T ss_pred -----------------------------hcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCC-Ch-hHcCCCC
Confidence 333588888888888653 37888999999999999984 44 5888999
Q ss_pred ccEEECcCCcCCCCCCccccCcCCCCeeeCcCC
Q 041683 569 IESLDLSANQLSGQIPQSMSNLSFLNHLNLSNN 601 (743)
Q Consensus 569 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N 601 (743)
|++|++++|++++..| +.++++|+.|+|++|
T Consensus 353 L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 353 INWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp CCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 9999999999986654 788999999999987
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.95 E-value=6.5e-26 Score=239.05 Aligned_cols=52 Identities=21% Similarity=0.377 Sum_probs=33.4
Q ss_pred cEEEccCCcCcccCchhhcccCCCCEEeCCCCcCcccCCCCCCCCCCccEEECcCC
Q 041683 522 RSIDVSKNIFSGEIPVEVTNLQGLQSLNLSHNLLTGRIPDNIGVMRSIESLDLSAN 577 (743)
Q Consensus 522 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 577 (743)
++|++++|++++ ++ .+.++++|++|++++|++++..| +.++++|+.|+|++|
T Consensus 332 ~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 332 QRLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp CEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 555555555543 22 46667777777777777775443 667777777777776
No 4
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.95 E-value=4.1e-28 Score=247.88 Aligned_cols=236 Identities=27% Similarity=0.477 Sum_probs=211.6
Q ss_pred CCCCCCCccEEECcC-CcCcccCCccccCCCCCCEEECCCCcCcccCCccccCCCCCcEEEccCccccccCCcccCCCCC
Q 041683 323 GENFSNNIEFLKLSK-NNFSGDIPDCWMNWLRLRALNLGHNNFTGSLPMSIGTLSSLLSLNLRNNILSGIIPTSFKNFSS 401 (743)
Q Consensus 323 ~~~~~~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 401 (743)
.+..+++|++|+|++ |++.+.+|..|.++++|++|+|++|++.+..+..+..+..|+.+++++|.+.+..|..+..++.
T Consensus 71 ~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~ 150 (313)
T d1ogqa_ 71 SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150 (313)
T ss_dssp GGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTT
T ss_pred HHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcc
Confidence 345589999999997 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEeCCCCcCcccCchhHHhcccC-CcEEEccCCcCcccCCccccCCCCccEEEccCCccccccCccccccccccccCc
Q 041683 402 LEVLDLGENELVGSIPSWIGERFSI-LKILNLRSNKFHGDFPIQLCGLAFLQILDVASNSLSGTIPRCINNLSAMAITDS 480 (743)
Q Consensus 402 L~~L~Ls~n~i~~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~ 480 (743)
|+.+++++|.+.+.+|..+. .+.. ++.+++++|++++..|..+..+..+ .++++++...+.+|..+..++.
T Consensus 151 L~~l~l~~n~l~~~ip~~~~-~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~~~~~~~~~~~~~~------ 222 (313)
T d1ogqa_ 151 LVGITFDGNRISGAIPDSYG-SFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNMLEGDASVLFGSDKN------ 222 (313)
T ss_dssp CCEEECCSSCCEEECCGGGG-CCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEEEECCGGGCCTTSC------
T ss_pred cceeeccccccccccccccc-cccccccccccccccccccccccccccccc-cccccccccccccccccccccc------
Confidence 99999999999999998887 4555 5899999999999999888877654 7999999999888887776665
Q ss_pred cchhhhhhccccCCCCcccccccceeeeceeeehhcccccccEEEccCCcCcccCchhhcccCCCCEEeCCCCcCcccCC
Q 041683 481 YDQAVILYSSLRSEGQSEIFEDASLVMKGVLVEYNSILNLVRSIDVSKNIFSGEIPVEVTNLQGLQSLNLSHNLLTGRIP 560 (743)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 560 (743)
++.+++++|.+++.+| .+..+++|+.|+|++|+++|.+|
T Consensus 223 ----------------------------------------l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP 261 (313)
T d1ogqa_ 223 ----------------------------------------TQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLP 261 (313)
T ss_dssp ----------------------------------------CSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCC
T ss_pred ----------------------------------------cccccccccccccccc-ccccccccccccCccCeecccCC
Confidence 4899999999997655 68889999999999999999999
Q ss_pred CCCCCCCCccEEECcCCcCCCCCCccccCcCCCCeeeCcCCc-cccc-CC
Q 041683 561 DNIGVMRSIESLDLSANQLSGQIPQSMSNLSFLNHLNLSNNN-LVGK-IP 608 (743)
Q Consensus 561 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~-l~~~-~p 608 (743)
+.|+++++|++|+|++|+++|.+|+ +..+++|+.+++++|+ +.|. +|
T Consensus 262 ~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~~l~g~plp 310 (313)
T d1ogqa_ 262 QGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp GGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSSEEESTTSS
T ss_pred hHHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCccccCCCCC
Confidence 9999999999999999999999996 6789999999999998 4553 44
No 5
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=4.8e-25 Score=221.29 Aligned_cols=228 Identities=22% Similarity=0.218 Sum_probs=153.6
Q ss_pred EECcCCcCcccCCccccCCCCCCEEECCCCcCcccCCccccCCCCCcEEEccCccccccCCcccCCCCCCCEEeCCC-Cc
Q 041683 333 LKLSKNNFSGDIPDCWMNWLRLRALNLGHNNFTGSLPMSIGTLSSLLSLNLRNNILSGIIPTSFKNFSSLEVLDLGE-NE 411 (743)
Q Consensus 333 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~-n~ 411 (743)
++.++++++ .+|..+. +++++|+|++|+|++..+.+|.++++|++|++++|.+..+.+..+..++.++.++... +.
T Consensus 16 v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~ 92 (284)
T d1ozna_ 16 TSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 92 (284)
T ss_dssp EECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTT
T ss_pred EEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence 444555555 3333222 3566666666666655555666666666666666666666666666666666665543 33
Q ss_pred CcccCchhHHhcccCCcEEEccCCcCcccCCccccCCCCccEEEccCCccccccCccccccccccccCccchhhhhhccc
Q 041683 412 LVGSIPSWIGERFSILKILNLRSNKFHGDFPIQLCGLAFLQILDVASNSLSGTIPRCINNLSAMAITDSYDQAVILYSSL 491 (743)
Q Consensus 412 i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~~~~~~~~~ 491 (743)
+. .++...+.++++|++|++++|.+....+..+....+|+.+++++|.+++..+..|..++.
T Consensus 93 ~~-~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~----------------- 154 (284)
T d1ozna_ 93 LR-SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGN----------------- 154 (284)
T ss_dssp CC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT-----------------
T ss_pred cc-cccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccc-----------------
Confidence 33 444444445666666666666666555556666667777777777776555555554444
Q ss_pred cCCCCcccccccceeeeceeeehhcccccccEEEccCCcCcccCchhhcccCCCCEEeCCCCcCcccCCCCCCCCCCccE
Q 041683 492 RSEGQSEIFEDASLVMKGVLVEYNSILNLVRSIDVSKNIFSGEIPVEVTNLQGLQSLNLSHNLLTGRIPDNIGVMRSIES 571 (743)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 571 (743)
|+.|++++|++++..+..|.++++|+.+++++|++++..|..|..+++|++
T Consensus 155 -----------------------------L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~ 205 (284)
T d1ozna_ 155 -----------------------------LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMT 205 (284)
T ss_dssp -----------------------------CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred -----------------------------hhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhccc
Confidence 367777777777777777888888888888888888878888888888888
Q ss_pred EECcCCcCCCCCCccccCcCCCCeeeCcCCcccccCCCC
Q 041683 572 LDLSANQLSGQIPQSMSNLSFLNHLNLSNNNLVGKIPSS 610 (743)
Q Consensus 572 L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~ 610 (743)
|++++|++.+..|..|..+++|++|++++|++.|.++..
T Consensus 206 L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~~~ 244 (284)
T d1ozna_ 206 LYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR 244 (284)
T ss_dssp EECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH
T ss_pred ccccccccccccccccccccccCEEEecCCCCCCCccch
Confidence 888888888777778888888888888888888876643
No 6
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=8.2e-25 Score=219.57 Aligned_cols=251 Identities=20% Similarity=0.207 Sum_probs=211.2
Q ss_pred CCccEEECcCCcCcccCCccccCCCCCCEEECCCCcCcccCCccccCCCCCcEEEcc-CccccccCCcccCCCCCCCEEe
Q 041683 328 NNIEFLKLSKNNFSGDIPDCWMNWLRLRALNLGHNNFTGSLPMSIGTLSSLLSLNLR-NNILSGIIPTSFKNFSSLEVLD 406 (743)
Q Consensus 328 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~-~n~i~~~~~~~~~~l~~L~~L~ 406 (743)
+++++|+|++|+|+++.+..|.++++|++|++++|.+....+..+..+..++.+... .+.++.+.+..|.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 578999999999998888899999999999999999998888889999999998865 5677777788999999999999
Q ss_pred CCCCcCcccCchhHHhcccCCcEEEccCCcCcccCCccccCCCCccEEEccCCccccccCccccccccccccCccchhhh
Q 041683 407 LGENELVGSIPSWIGERFSILKILNLRSNKFHGDFPIQLCGLAFLQILDVASNSLSGTIPRCINNLSAMAITDSYDQAVI 486 (743)
Q Consensus 407 Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~~~~ 486 (743)
+++|.+. .++...+...++|+.+++++|.++++.+..|..+++|+.|++++|++.+..+..|.+++.|
T Consensus 112 l~~n~~~-~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L----------- 179 (284)
T d1ozna_ 112 LDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSL----------- 179 (284)
T ss_dssp CTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC-----------
T ss_pred cCCcccc-cccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhcccccc-----------
Confidence 9999997 5555555568899999999999998778889999999999999999998778788777664
Q ss_pred hhccccCCCCcccccccceeeeceeeehhcccccccEEEccCCcCcccCchhhcccCCCCEEeCCCCcCcccCCCCCCCC
Q 041683 487 LYSSLRSEGQSEIFEDASLVMKGVLVEYNSILNLVRSIDVSKNIFSGEIPVEVTNLQGLQSLNLSHNLLTGRIPDNIGVM 566 (743)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 566 (743)
+.+++++|++++..|..|.++++|++|++++|++.+..|..|+.+
T Consensus 180 -----------------------------------~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~ 224 (284)
T d1ozna_ 180 -----------------------------------DRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPL 224 (284)
T ss_dssp -----------------------------------CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTC
T ss_pred -----------------------------------chhhhhhccccccChhHhhhhhhcccccccccccccccccccccc
Confidence 899999999999999999999999999999999998888899999
Q ss_pred CCccEEECcCCcCCCCCCccccCcCCCCeeeCcCCcccccCCCCcccCCCCCccccCCCCCC
Q 041683 567 RSIESLDLSANQLSGQIPQSMSNLSFLNHLNLSNNNLVGKIPSSTQLQSFGASSFAGNDLCG 628 (743)
Q Consensus 567 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~n~l~~ 628 (743)
++|+.|++++|++...-+. ..-...++.+....+.+.|..|... .......+..++++|
T Consensus 225 ~~L~~L~l~~N~l~C~C~~-~~l~~~l~~~~~~~~~~~C~~p~~l--~g~~l~~l~~~~l~g 283 (284)
T d1ozna_ 225 RALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQRL--AGRDLKRLAANDLQG 283 (284)
T ss_dssp TTCCEEECCSSCEECSGGG-HHHHHHHHHCCSEECCCBEEESGGG--TTCBGGGSCGGGSCC
T ss_pred cccCEEEecCCCCCCCccc-hHHHHHHHhCcCCCCceEeCCchHH--cCCccccCCHHHCCC
Confidence 9999999999999865331 1122456677888889998877642 222333344455554
No 7
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.92 E-value=9.4e-24 Score=214.37 Aligned_cols=227 Identities=20% Similarity=0.276 Sum_probs=127.5
Q ss_pred CccEEEccCCcCcccchhhccCCCCCCEEECcCccCccccchhccCCCCCCEEEccCCCCccccChhhhcCCCCCCEEEC
Q 041683 122 ELESLRLGSSQIFGHLTNQLRRFKRLNSLDLSNTILDGSIPFSLGQISNLEYLDLSNNKLNGTVSEIHFVNLTKLAFFRA 201 (743)
Q Consensus 122 ~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l 201 (743)
++++|+|++|+++...+.+|.++++|++|++++|.+....|..|.++++|++|++++|+++ .++.. ...
T Consensus 32 ~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~-~l~~~---~~~------- 100 (305)
T d1xkua_ 32 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEK---MPK------- 100 (305)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSS---CCT-------
T ss_pred CCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccC-cCccc---hhh-------
Confidence 4555555555554444444555555555555555555444555555555555555555554 33321 112
Q ss_pred CCCcceeecCCCCCCCccccEEEcCCCcCCCCcchhhcCCCCCCEEEccCCCCccc-cChhhhhhcccCceEecccCccc
Q 041683 202 NGNSLIFKINPNWVPPFQLTVLELRSCHLGPRFPLWLQSQRELNDLDISSTRISAK-IPRGFWNSIYQYFYLNISGNQIY 280 (743)
Q Consensus 202 ~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~-~~~~~~~~l~~L~~L~l~~n~l~ 280 (743)
.++.|.+.+|.+....+..+.....+..++...|..... .....+..+++|+.+++++|.+.
T Consensus 101 -----------------~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~ 163 (305)
T d1xkua_ 101 -----------------TLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 163 (305)
T ss_dssp -----------------TCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred -----------------hhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc
Confidence 344444444444444444555566666666666543221 11223344555666666655543
Q ss_pred cCCCCCCCCCCCcccCCCCCCCCeEEecCCccccccchhhccCCCCCCCccEEECcCCcCcccCCccccCCCCCCEEECC
Q 041683 281 GGIPKFDNPSMPLITTPSDLLGPIFDLSNNALSGSIFHLICQGENFSNNIEFLKLSKNNFSGDIPDCWMNWLRLRALNLG 360 (743)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~l~~~~l~ls~n~l~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 360 (743)
. +|. ..+++|++|++++|......+..|..++.++.|+++
T Consensus 164 ~-l~~---------------------------------------~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s 203 (305)
T d1xkua_ 164 T-IPQ---------------------------------------GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLS 203 (305)
T ss_dssp S-CCS---------------------------------------SCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECC
T ss_pred c-cCc---------------------------------------ccCCccCEEECCCCcCCCCChhHhhccccccccccc
Confidence 1 110 013467777777777766666667777777777777
Q ss_pred CCcCcccCCccccCCCCCcEEEccCccccccCCcccCCCCCCCEEeCCCCcCcccCch
Q 041683 361 HNNFTGSLPMSIGTLSSLLSLNLRNNILSGIIPTSFKNFSSLEVLDLGENELVGSIPS 418 (743)
Q Consensus 361 ~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 418 (743)
+|.+.+..+..+.++++|++|+|++|.++. +|.+|..+++|++|++++|+|+ .++.
T Consensus 204 ~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~-lp~~l~~l~~L~~L~Ls~N~i~-~i~~ 259 (305)
T d1xkua_ 204 FNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNIS-AIGS 259 (305)
T ss_dssp SSCCCEECTTTGGGSTTCCEEECCSSCCSS-CCTTTTTCSSCCEEECCSSCCC-CCCT
T ss_pred cccccccccccccccccceeeecccccccc-cccccccccCCCEEECCCCccC-ccCh
Confidence 777776666667777777777777777763 3556667777777777777766 4443
No 8
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.91 E-value=6.1e-23 Score=208.28 Aligned_cols=63 Identities=27% Similarity=0.336 Sum_probs=30.4
Q ss_pred cCCCCCCCEEeCCCCcCcccCchhHHhcccCCcEEEccCCcCcccCCccccCCCCccEEEccCCccc
Q 041683 396 FKNFSSLEVLDLGENELVGSIPSWIGERFSILKILNLRSNKFHGDFPIQLCGLAFLQILDVASNSLS 462 (743)
Q Consensus 396 ~~~l~~L~~L~Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 462 (743)
+..+++|+.+++++|.+. .+|.. .+++|+.|++++|...+..+..|.+++.++.|++++|.+.
T Consensus 146 ~~~l~~L~~l~l~~n~l~-~l~~~---~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~ 208 (305)
T d1xkua_ 146 FQGMKKLSYIRIADTNIT-TIPQG---LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS 208 (305)
T ss_dssp GGGCTTCCEEECCSSCCC-SCCSS---CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCC
T ss_pred cccccccCccccccCCcc-ccCcc---cCCccCEEECCCCcCCCCChhHhhcccccccccccccccc
Confidence 333344444444444443 33322 1344555555555555555555555555555555555554
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=3.1e-23 Score=205.46 Aligned_cols=203 Identities=22% Similarity=0.283 Sum_probs=140.0
Q ss_pred CCCCEEECCCCcCcccCCccccCCCCCcEEEccCccccccCCcccCCCCCCCEEeCCCCcCcccCchhHHhcccCCcEEE
Q 041683 352 LRLRALNLGHNNFTGSLPMSIGTLSSLLSLNLRNNILSGIIPTSFKNFSSLEVLDLGENELVGSIPSWIGERFSILKILN 431 (743)
Q Consensus 352 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~~l~~L~~L~ 431 (743)
..+.+++.+++.++ .+|..+. +++++|+|++|.|+++.+.+|.++++|++|+|++|+++ .++.. ..+++|++|+
T Consensus 10 ~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~~~--~~l~~L~~L~ 83 (266)
T d1p9ag_ 10 ASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVD--GTLPVLGTLD 83 (266)
T ss_dssp TTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEECC--SCCTTCCEEE
T ss_pred CCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-ccccc--cccccccccc
Confidence 34444555555555 2343332 34555666666555555555556666666666666655 44432 2456666666
Q ss_pred ccCCcCcccCCccccCCCCccEEEccCCccccccCccccccccccccCccchhhhhhccccCCCCcccccccceeeecee
Q 041683 432 LRSNKFHGDFPIQLCGLAFLQILDVASNSLSGTIPRCINNLSAMAITDSYDQAVILYSSLRSEGQSEIFEDASLVMKGVL 511 (743)
Q Consensus 432 L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (743)
+++|++.. .+..+..+++|+.|++++|.+.+..+..+..+..
T Consensus 84 Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~------------------------------------- 125 (266)
T d1p9ag_ 84 LSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGE------------------------------------- 125 (266)
T ss_dssp CCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTT-------------------------------------
T ss_pred cccccccc-cccccccccccccccccccccceeeccccccccc-------------------------------------
Confidence 66666653 3445666777777777777766544444444333
Q ss_pred eehhcccccccEEEccCCcCcccCchhhcccCCCCEEeCCCCcCcccCCCCCCCCCCccEEECcCCcCCCCCCccccCcC
Q 041683 512 VEYNSILNLVRSIDVSKNIFSGEIPVEVTNLQGLQSLNLSHNLLTGRIPDNIGVMRSIESLDLSANQLSGQIPQSMSNLS 591 (743)
Q Consensus 512 ~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 591 (743)
+++|++++|.++...+..+..++.|+.|++++|++++..++.|..+++|++|+|++|+|+ .+|+.+..++
T Consensus 126 ---------l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~ 195 (266)
T d1p9ag_ 126 ---------LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSH 195 (266)
T ss_dssp ---------CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTC
T ss_pred ---------cccccccccccceeccccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCC
Confidence 477777888777677777888999999999999999888888999999999999999999 7888888899
Q ss_pred CCCeeeCcCCcccccCC
Q 041683 592 FLNHLNLSNNNLVGKIP 608 (743)
Q Consensus 592 ~L~~L~ls~N~l~~~~p 608 (743)
+|+.|+|++|++.|.+.
T Consensus 196 ~L~~L~L~~Np~~CdC~ 212 (266)
T d1p9ag_ 196 LLPFAFLHGNPWLCNCE 212 (266)
T ss_dssp CCSEEECCSCCBCCSGG
T ss_pred CCCEEEecCCCCCCCcc
Confidence 99999999999988643
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=9.1e-22 Score=194.73 Aligned_cols=201 Identities=21% Similarity=0.177 Sum_probs=168.6
Q ss_pred CCCccEEECcCCcCcccCCccccCCCCCCEEECCCCcCcccCCccccCCCCCcEEEccCccccccCCcccCCCCCCCEEe
Q 041683 327 SNNIEFLKLSKNNFSGDIPDCWMNWLRLRALNLGHNNFTGSLPMSIGTLSSLLSLNLRNNILSGIIPTSFKNFSSLEVLD 406 (743)
Q Consensus 327 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 406 (743)
...+.+++.++++++. +|..+. +++++|+|++|++++..+.+|.++++|++|+|++|.++.+. .+..+++|++|+
T Consensus 9 ~~~~~~v~C~~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~--~~~~l~~L~~L~ 83 (266)
T d1p9ag_ 9 VASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQ--VDGTLPVLGTLD 83 (266)
T ss_dssp STTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEE--CCSCCTTCCEEE
T ss_pred cCCCeEEEccCCCCCe-eCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccccc--cccccccccccc
Confidence 3456777888888884 565443 57899999999998777778889999999999999988543 467889999999
Q ss_pred CCCCcCcccCchhHHhcccCCcEEEccCCcCcccCCccccCCCCccEEEccCCccccccCccccccccccccCccchhhh
Q 041683 407 LGENELVGSIPSWIGERFSILKILNLRSNKFHGDFPIQLCGLAFLQILDVASNSLSGTIPRCINNLSAMAITDSYDQAVI 486 (743)
Q Consensus 407 Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~~~~ 486 (743)
+++|++. ..+..+. .+++|++|++++|.+.+..+..+..+.+++.|++++|.+....+..+..++.
T Consensus 84 Ls~N~l~-~~~~~~~-~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~------------ 149 (266)
T d1p9ag_ 84 LSHNQLQ-SLPLLGQ-TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPK------------ 149 (266)
T ss_dssp CCSSCCS-SCCCCTT-TCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTT------------
T ss_pred ccccccc-ccccccc-cccccccccccccccceeeccccccccccccccccccccceecccccccccc------------
Confidence 9999987 4555443 6889999999999998877888889999999999999998666666665555
Q ss_pred hhccccCCCCcccccccceeeeceeeehhcccccccEEEccCCcCcccCchhhcccCCCCEEeCCCCcCcccCCCCCCCC
Q 041683 487 LYSSLRSEGQSEIFEDASLVMKGVLVEYNSILNLVRSIDVSKNIFSGEIPVEVTNLQGLQSLNLSHNLLTGRIPDNIGVM 566 (743)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 566 (743)
++.+++++|++++..+..|..+++|++|+|++|+|+ .+|+.+..+
T Consensus 150 ----------------------------------l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~ 194 (266)
T d1p9ag_ 150 ----------------------------------LEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGS 194 (266)
T ss_dssp ----------------------------------CCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTT
T ss_pred ----------------------------------chhcccccccccccCccccccccccceeecccCCCc-ccChhHCCC
Confidence 489999999999888888999999999999999999 888888899
Q ss_pred CCccEEECcCCcCCC
Q 041683 567 RSIESLDLSANQLSG 581 (743)
Q Consensus 567 ~~L~~L~Ls~N~l~~ 581 (743)
++|+.|+|++|++..
T Consensus 195 ~~L~~L~L~~Np~~C 209 (266)
T d1p9ag_ 195 HLLPFAFLHGNPWLC 209 (266)
T ss_dssp CCCSEEECCSCCBCC
T ss_pred CCCCEEEecCCCCCC
Confidence 999999999999874
No 11
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.79 E-value=3.8e-17 Score=168.83 Aligned_cols=219 Identities=24% Similarity=0.293 Sum_probs=111.7
Q ss_pred CccEEEccCCcCcccchhhccCCCCCCEEECcCccCccccchhccCCCCCCEEEccCCCCccccChhhhcCCCCCCEEEC
Q 041683 122 ELESLRLGSSQIFGHLTNQLRRFKRLNSLDLSNTILDGSIPFSLGQISNLEYLDLSNNKLNGTVSEIHFVNLTKLAFFRA 201 (743)
Q Consensus 122 ~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l 201 (743)
++++|+|+++.++. +|+. .++|++|++++|.|+ .+|.. ..+|++|++++|+++ .++. + .+.|++|++
T Consensus 39 ~l~~LdLs~~~L~~-lp~~---~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~-~l~~--l--p~~L~~L~L 105 (353)
T d1jl5a_ 39 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLK-ALSD--L--PPLLEYLGV 105 (353)
T ss_dssp TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCS-CCCS--C--CTTCCEEEC
T ss_pred CCCEEEeCCCCCCC-CCCC---CCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccc-hhhh--h--ccccccccc
Confidence 56677777776643 4432 356677777777766 44543 345666677766665 3332 1 123555555
Q ss_pred CCCcceeecCCCCCCCccccEEEcCCCcCCCCcchhhcCCCCCCEEEccCCCCccccChhhhhhcccCceEecccCcccc
Q 041683 202 NGNSLIFKINPNWVPPFQLTVLELRSCHLGPRFPLWLQSQRELNDLDISSTRISAKIPRGFWNSIYQYFYLNISGNQIYG 281 (743)
Q Consensus 202 ~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~ 281 (743)
++|.+.. +|. +..+++|+.|+++++.+.. .+.. ...+..+.+..+....
T Consensus 106 ~~n~l~~-------------------------lp~-~~~l~~L~~L~l~~~~~~~-~~~~----~~~l~~l~~~~~~~~~ 154 (353)
T d1jl5a_ 106 SNNQLEK-------------------------LPE-LQNSSFLKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE 154 (353)
T ss_dssp CSSCCSS-------------------------CCC-CTTCTTCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSS
T ss_pred ccccccc-------------------------ccc-hhhhccceeeccccccccc-cccc----cccccchhhccccccc
Confidence 5554432 222 3445555555555555542 2111 2334444444333221
Q ss_pred CCCCCCCCCCCcccCCCCCCCCeEEecCCccccccchhhccCCCCCCCccEEECcCCcCcccCCccccCCCCCCEEECCC
Q 041683 282 GIPKFDNPSMPLITTPSDLLGPIFDLSNNALSGSIFHLICQGENFSNNIEFLKLSKNNFSGDIPDCWMNWLRLRALNLGH 361 (743)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~l~~~~l~ls~n~l~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 361 (743)
. ..+..++.++.+++++|..... +. .....+.+...+
T Consensus 155 ~---------------------------------------~~l~~l~~l~~L~l~~n~~~~~-~~---~~~~~~~l~~~~ 191 (353)
T d1jl5a_ 155 L---------------------------------------PELQNLPFLTAIYADNNSLKKL-PD---LPLSLESIVAGN 191 (353)
T ss_dssp C---------------------------------------CCCTTCTTCCEEECCSSCCSSC-CC---CCTTCCEEECCS
T ss_pred c---------------------------------------ccccccccceeccccccccccc-cc---cccccccccccc
Confidence 0 1122245667777777766532 21 122345566665
Q ss_pred CcCcccCCccccCCCCCcEEEccCccccccCCcccCCCCCCCEEeCCCCcCcccCchhHHhcccCCcEEEccCCcCc
Q 041683 362 NNFTGSLPMSIGTLSSLLSLNLRNNILSGIIPTSFKNFSSLEVLDLGENELVGSIPSWIGERFSILKILNLRSNKFH 438 (743)
Q Consensus 362 n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~ 438 (743)
+.+. ..+ .+..++.|+.+++++|..... + ....++..+.+.++.+. ..+. ....+...++..+.+.
T Consensus 192 ~~~~-~~~-~~~~l~~L~~l~l~~n~~~~~-~---~~~~~l~~~~~~~~~~~-~~~~----~~~~l~~~~~~~~~~~ 257 (353)
T d1jl5a_ 192 NILE-ELP-ELQNLPFLTTIYADNNLLKTL-P---DLPPSLEALNVRDNYLT-DLPE----LPQSLTFLDVSENIFS 257 (353)
T ss_dssp SCCS-SCC-CCTTCTTCCEEECCSSCCSSC-C---SCCTTCCEEECCSSCCS-CCCC----CCTTCCEEECCSSCCS
T ss_pred cccc-ccc-ccccccccccccccccccccc-c---ccccccccccccccccc-cccc----cccccccccccccccc
Confidence 5554 232 345677777777777765532 2 23455667777777665 2222 2344555555555444
No 12
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.78 E-value=1.3e-16 Score=164.87 Aligned_cols=138 Identities=25% Similarity=0.266 Sum_probs=69.3
Q ss_pred CccEEEccCCcCcccchhhccCCCCCCEEECcCccCccccchhccCCCCCCEEEccCCCCccccChhhhcCCCCCCEEEC
Q 041683 122 ELESLRLGSSQIFGHLTNQLRRFKRLNSLDLSNTILDGSIPFSLGQISNLEYLDLSNNKLNGTVSEIHFVNLTKLAFFRA 201 (743)
Q Consensus 122 ~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~l 201 (743)
.|++|++++|.+.. +|. ++.+++|++|+++++.+... +. ....+..+.+.++... ... .+..++.++.+++
T Consensus 99 ~L~~L~L~~n~l~~-lp~-~~~l~~L~~L~l~~~~~~~~-~~---~~~~l~~l~~~~~~~~-~~~--~l~~l~~l~~L~l 169 (353)
T d1jl5a_ 99 LLEYLGVSNNQLEK-LPE-LQNSSFLKIIDVDNNSLKKL-PD---LPPSLEFIAAGNNQLE-ELP--ELQNLPFLTAIYA 169 (353)
T ss_dssp TCCEEECCSSCCSS-CCC-CTTCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCS-SCC--CCTTCTTCCEEEC
T ss_pred cccccccccccccc-ccc-hhhhccceeecccccccccc-cc---ccccccchhhcccccc-ccc--cccccccceeccc
Confidence 46666666666643 332 45666777777776666532 21 2345566666555543 211 3555666666666
Q ss_pred CCCcceeecCCCCCCCccccEEEcCCCcCCCCcchhhcCCCCCCEEEccCCCCccccChhhhhhcccCceEecccCcc
Q 041683 202 NGNSLIFKINPNWVPPFQLTVLELRSCHLGPRFPLWLQSQRELNDLDISSTRISAKIPRGFWNSIYQYFYLNISGNQI 279 (743)
Q Consensus 202 ~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~~l~~L~~L~l~~n~l 279 (743)
++|....... .....+.+...++.+. ..+ .+..++.|+.+++++|.... .+.. ..++..+.+.++.+
T Consensus 170 ~~n~~~~~~~----~~~~~~~l~~~~~~~~-~~~-~~~~l~~L~~l~l~~n~~~~-~~~~----~~~l~~~~~~~~~~ 236 (353)
T d1jl5a_ 170 DNNSLKKLPD----LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL----PPSLEALNVRDNYL 236 (353)
T ss_dssp CSSCCSSCCC----CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC----CTTCCEEECCSSCC
T ss_pred cccccccccc----cccccccccccccccc-ccc-cccccccccccccccccccc-cccc----cccccccccccccc
Confidence 6665432211 1112334444444332 122 24456666777776665542 2221 23455555555544
No 13
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=2.3e-20 Score=201.09 Aligned_cols=63 Identities=19% Similarity=0.115 Sum_probs=34.6
Q ss_pred ccEEEccCCcCccc----CchhhcccCCCCEEeCCCCcCcccCCCC----CC-CCCCccEEECcCCcCCCCC
Q 041683 521 VRSIDVSKNIFSGE----IPVEVTNLQGLQSLNLSHNLLTGRIPDN----IG-VMRSIESLDLSANQLSGQI 583 (743)
Q Consensus 521 L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~-~l~~L~~L~Ls~N~l~~~~ 583 (743)
|++|+|++|.++.. ++..+..+++|++|+|++|+++...... +. +...|+.|++++|.+....
T Consensus 371 L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~~~ 442 (460)
T d1z7xw1 371 LRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEM 442 (460)
T ss_dssp CCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHH
T ss_pred CCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCHHH
Confidence 45556666555432 3344555667777777777765422211 11 2235777777777776443
No 14
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.2e-20 Score=203.25 Aligned_cols=238 Identities=19% Similarity=0.107 Sum_probs=146.4
Q ss_pred CCCccEEECcCCcCcccC----Cccc-cCCCCCCEEECCCCcCccc----CCccccCCCCCcEEEccCccccc-----cC
Q 041683 327 SNNIEFLKLSKNNFSGDI----PDCW-MNWLRLRALNLGHNNFTGS----LPMSIGTLSSLLSLNLRNNILSG-----II 392 (743)
Q Consensus 327 ~~~L~~L~Ls~n~l~~~~----~~~~-~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~L~~n~i~~-----~~ 392 (743)
...++.++++++...... ...+ ........+++..+.+... ....+...+.++.+++.+|.+.. ..
T Consensus 168 ~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~~~~~~~ 247 (460)
T d1z7xw1 168 KPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELC 247 (460)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhccccccccchhh
Confidence 345677777766554211 0111 1223456777777765421 11223456778888888876542 22
Q ss_pred CcccCCCCCCCEEeCCCCcCcccCchhH---HhcccCCcEEEccCCcCcccCCcc-----ccCCCCccEEEccCCccccc
Q 041683 393 PTSFKNFSSLEVLDLGENELVGSIPSWI---GERFSILKILNLRSNKFHGDFPIQ-----LCGLAFLQILDVASNSLSGT 464 (743)
Q Consensus 393 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~---~~~l~~L~~L~L~~n~l~~~~~~~-----~~~l~~L~~L~Ls~N~l~~~ 464 (743)
.........++.+++++|.+........ ....+.++.+++++|.+....... ......|+.+++++|.+...
T Consensus 248 ~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~ 327 (460)
T d1z7xw1 248 PGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAA 327 (460)
T ss_dssp HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGG
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccchhhh
Confidence 3344556788888888888763322111 124678888888888876322111 12345788999999887643
Q ss_pred cCccccccccccccCccchhhhhhccccCCCCcccccccceeeeceeeehhcccccccEEEccCCcCccc----Cchhhc
Q 041683 465 IPRCINNLSAMAITDSYDQAVILYSSLRSEGQSEIFEDASLVMKGVLVEYNSILNLVRSIDVSKNIFSGE----IPVEVT 540 (743)
Q Consensus 465 ~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~----~~~~~~ 540 (743)
....+.++. ...+.|++|||++|++++. ++..+.
T Consensus 328 ~~~~l~~~~------------------------------------------~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~ 365 (460)
T d1z7xw1 328 CCSHFSSVL------------------------------------------AQNRFLLELQISNNRLEDAGVRELCQGLG 365 (460)
T ss_dssp GHHHHHHHH------------------------------------------HHCSSCCEEECCSSBCHHHHHHHHHHHHT
T ss_pred hhhhccccc------------------------------------------ccccchhhhheeeecccCcccchhhhhhh
Confidence 322222111 1234579999999998753 233333
Q ss_pred -ccCCCCEEeCCCCcCccc----CCCCCCCCCCccEEECcCCcCCCCCCcc----cc-CcCCCCeeeCcCCccccc
Q 041683 541 -NLQGLQSLNLSHNLLTGR----IPDNIGVMRSIESLDLSANQLSGQIPQS----MS-NLSFLNHLNLSNNNLVGK 606 (743)
Q Consensus 541 -~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~----l~-~l~~L~~L~ls~N~l~~~ 606 (743)
..+.|++|+|++|.++.. +++.+...++|++|++++|+|+...... +. ....|+.|++.+|.+...
T Consensus 366 ~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~~ 441 (460)
T d1z7xw1 366 QPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEE 441 (460)
T ss_dssp STTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHH
T ss_pred cccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCHH
Confidence 457799999999999742 4455666789999999999997543322 22 334799999999988754
No 15
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.4e-18 Score=169.32 Aligned_cols=213 Identities=15% Similarity=0.086 Sum_probs=154.4
Q ss_pred CCcCCCCCCCCCCCCCCCCEEECCCCCCCCCCchhhcCCCCCCEEEcCCCccccccCcccccCCCCCCEEEcCCCCcCCc
Q 041683 3 GNQFQGQIPSRLGNLTSLKYLDLSSNELNSTVLGWLSKVNDLEFLSVYSNRLQGNVSSLGLENLTSIKRLYLSENDELGG 82 (743)
Q Consensus 3 ~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~~~~l~~ 82 (743)
+.+++ .+|..+. +++++|+|++|+|+.+.+.+|.++++|++|++++|.+...++..+|.+++.++++++..++.+..
T Consensus 17 ~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~ 93 (242)
T d1xwdc1 17 ESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLY 93 (242)
T ss_dssp SCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCE
T ss_pred CCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccc
Confidence 44566 5665553 58999999999998888888999999999999999988667776889999999999876677777
Q ss_pred ccchhccCCCCCCEEEccCCcCcccch-hhhhcccccccCCccEEEccCCcCcccchhhccCCC-CCCEEECcCccCccc
Q 041683 83 KIPTSFGKLCKLTSFSMRFTKLSQDIS-EILGIFSACVANELESLRLGSSQIFGHLTNQLRRFK-RLNSLDLSNTILDGS 160 (743)
Q Consensus 83 ~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~-~L~~L~Ls~n~l~~~ 160 (743)
..+..|.++++|+++++++|.+....+ ..+..+. .+..+...++.+....+..|..++ .++.|++++|.++..
T Consensus 94 ~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~-----~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i 168 (242)
T d1xwdc1 94 INPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQ-----KVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI 168 (242)
T ss_dssp ECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSS-----CEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE
T ss_pred cccccccccccccccccchhhhccccccccccccc-----ccccccccccccccccccccccccccceeeeccccccccc
Confidence 778889999999999999998765322 1222222 566666677777666666666654 788888888888855
Q ss_pred cchhccCCCCCCEE-EccCCCCccccChhhhcCCCCCCEEECCCCcceeecCCCCCCCccccEEEc
Q 041683 161 IPFSLGQISNLEYL-DLSNNKLNGTVSEIHFVNLTKLAFFRANGNSLIFKINPNWVPPFQLTVLEL 225 (743)
Q Consensus 161 ~~~~~~~l~~L~~L-~L~~n~l~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l 225 (743)
.+..| ...+++++ ++++|+++ .++...|.++++|++|++++|+++...+..|..+.+|+.+++
T Consensus 169 ~~~~~-~~~~l~~~~~l~~n~l~-~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~ 232 (242)
T d1xwdc1 169 HNCAF-NGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 232 (242)
T ss_dssp CTTTT-TTCCEEEEECTTCTTCC-CCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSE
T ss_pred ccccc-cchhhhccccccccccc-cccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcC
Confidence 44444 34454444 56777776 666656788888888888888877554445555555555444
No 16
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.9e-18 Score=166.99 Aligned_cols=202 Identities=16% Similarity=0.106 Sum_probs=105.6
Q ss_pred CccEEECcCCcCcccCCccccCCCCCCEEECCCCcCccc-CCccccCCCCCcEEEccC-ccccccCCcccCCCCCCCEEe
Q 041683 329 NIEFLKLSKNNFSGDIPDCWMNWLRLRALNLGHNNFTGS-LPMSIGTLSSLLSLNLRN-NILSGIIPTSFKNFSSLEVLD 406 (743)
Q Consensus 329 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~ 406 (743)
++++|++++|.+..+.+..|.++++|++|++++|.+... .+.+|.+++.++++.+.. |.+....+..|.++++|++++
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred CCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccc
Confidence 455566666655544444555555566666655555432 233455555555555443 344444455555555555555
Q ss_pred CCCCcCcccCchhHHhcccCCcEEEccCCcCcccCCccccCCCCccEEEccCCccccccCccccccccccccCccchhhh
Q 041683 407 LGENELVGSIPSWIGERFSILKILNLRSNKFHGDFPIQLCGLAFLQILDVASNSLSGTIPRCINNLSAMAITDSYDQAVI 486 (743)
Q Consensus 407 Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~~~~ 486 (743)
+++|.+. ..+... .+..++.+..+..+++.+....+..|..++.
T Consensus 110 l~~~~l~-~~~~~~-----------------------~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~------------ 153 (242)
T d1xwdc1 110 ISNTGIK-HLPDVH-----------------------KIHSLQKVLLDIQDNINIHTIERNSFVGLSF------------ 153 (242)
T ss_dssp EESCCCC-SCCCCT-----------------------TTCBSSCEEEEEESCTTCCEECTTSSTTSBS------------
T ss_pred cchhhhc-cccccc-----------------------ccccccccccccccccccccccccccccccc------------
Confidence 5555554 222111 1222333333344444444333333322221
Q ss_pred hhccccCCCCcccccccceeeeceeeehhcccccccEEEccCCcCcccCchhhcccCCCCEE-eCCCCcCcccCCCCCCC
Q 041683 487 LYSSLRSEGQSEIFEDASLVMKGVLVEYNSILNLVRSIDVSKNIFSGEIPVEVTNLQGLQSL-NLSHNLLTGRIPDNIGV 565 (743)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L-~Ls~N~l~~~~p~~~~~ 565 (743)
.++.|++++|+++...+..+. .++++++ ++++|+++...+..|.+
T Consensus 154 ---------------------------------~l~~L~l~~n~l~~i~~~~~~-~~~l~~~~~l~~n~l~~l~~~~f~~ 199 (242)
T d1xwdc1 154 ---------------------------------ESVILWLNKNGIQEIHNCAFN-GTQLDELNLSDNNNLEELPNDVFHG 199 (242)
T ss_dssp ---------------------------------SCEEEECCSSCCCEECTTTTT-TCCEEEEECTTCTTCCCCCTTTTTT
T ss_pred ---------------------------------cceeeeccccccccccccccc-chhhhccccccccccccccHHHhcC
Confidence 135566666666644443333 3444443 45667777444455777
Q ss_pred CCCccEEECcCCcCCCCCCccccCcCCCCeeeCcC
Q 041683 566 MRSIESLDLSANQLSGQIPQSMSNLSFLNHLNLSN 600 (743)
Q Consensus 566 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~ 600 (743)
+++|++|++++|+++...+..|.++++|+.+++.+
T Consensus 200 l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 200 ASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp SCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEES
T ss_pred CCCCCEEECCCCcCCccCHHHHcCCcccccCcCCC
Confidence 78888888888888755555677777777666644
No 17
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75 E-value=6.7e-18 Score=162.36 Aligned_cols=205 Identities=23% Similarity=0.363 Sum_probs=136.5
Q ss_pred cEEECcCCcCcccCCccccCCCCCCEEECCCCcCcccCCccccCCCCCcEEEccCccccccCCcccCCCCCCCEEeCCCC
Q 041683 331 EFLKLSKNNFSGDIPDCWMNWLRLRALNLGHNNFTGSLPMSIGTLSSLLSLNLRNNILSGIIPTSFKNFSSLEVLDLGEN 410 (743)
Q Consensus 331 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n 410 (743)
..++++.+++.+.. .+..+.+|++|++.+|.++. + +.+..+++|++|++++|.+++..+ +..+++|+.+++++|
T Consensus 22 ~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~-l-~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n 95 (227)
T d1h6ua2 22 IKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-I-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGN 95 (227)
T ss_dssp HHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSC
T ss_pred HHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCc-c-hhHhcCCCCcEeecCCceeecccc--ccccccccccccccc
Confidence 33455555555432 34556677777777777764 3 346777777777777777765433 677777777777777
Q ss_pred cCcccCchhHHhcccCCcEEEccCCcCcccCCccccCCCCccEEEccCCccccccCccccccccccccCccchhhhhhcc
Q 041683 411 ELVGSIPSWIGERFSILKILNLRSNKFHGDFPIQLCGLAFLQILDVASNSLSGTIPRCINNLSAMAITDSYDQAVILYSS 490 (743)
Q Consensus 411 ~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~~~~~~~~ 490 (743)
.++ .++. +. .+++|+.++++++...+. ..+...+.++.+.++++.+....+ +..
T Consensus 96 ~~~-~i~~-l~-~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~--~~~------------------- 149 (227)
T d1h6ua2 96 PLK-NVSA-IA-GLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNISP--LAG------------------- 149 (227)
T ss_dssp CCS-CCGG-GT-TCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCGG--GGG-------------------
T ss_pred ccc-cccc-cc-cccccccccccccccccc--chhccccchhhhhchhhhhchhhh--hcc-------------------
Confidence 776 4543 22 577777777777766533 235566777777777776653221 222
Q ss_pred ccCCCCcccccccceeeeceeeehhcccccccEEEccCCcCcccCchhhcccCCCCEEeCCCCcCcccCCCCCCCCCCcc
Q 041683 491 LRSEGQSEIFEDASLVMKGVLVEYNSILNLVRSIDVSKNIFSGEIPVEVTNLQGLQSLNLSHNLLTGRIPDNIGVMRSIE 570 (743)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 570 (743)
.+.|+.|++++|.+++.. .+.++++|++|+|++|++++ ++. ++.+++|+
T Consensus 150 ---------------------------~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~-l~~-l~~l~~L~ 198 (227)
T d1h6ua2 150 ---------------------------LTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISD-ISP-LASLPNLI 198 (227)
T ss_dssp ---------------------------CTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CGG-GGGCTTCC
T ss_pred ---------------------------ccccccccccccccccch--hhcccccceecccCCCccCC-Chh-hcCCCCCC
Confidence 233577788888776433 37788888888888888874 433 77888889
Q ss_pred EEECcCCcCCCCCCccccCcCCCCeeeCcC
Q 041683 571 SLDLSANQLSGQIPQSMSNLSFLNHLNLSN 600 (743)
Q Consensus 571 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~ 600 (743)
+|++++|++++..| ++++++|+.|++++
T Consensus 199 ~L~Ls~N~lt~i~~--l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 199 EVHLKNNQISDVSP--LANTSNLFIVTLTN 226 (227)
T ss_dssp EEECTTSCCCBCGG--GTTCTTCCEEEEEE
T ss_pred EEECcCCcCCCCcc--cccCCCCCEEEeeC
Confidence 99999888885432 77888888888863
No 18
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.72 E-value=5.8e-17 Score=155.67 Aligned_cols=187 Identities=21% Similarity=0.315 Sum_probs=153.3
Q ss_pred CCCccEEECcCCcCcccCCccccCCCCCCEEECCCCcCcccCCccccCCCCCcEEEccCccccccCCcccCCCCCCCEEe
Q 041683 327 SNNIEFLKLSKNNFSGDIPDCWMNWLRLRALNLGHNNFTGSLPMSIGTLSSLLSLNLRNNILSGIIPTSFKNFSSLEVLD 406 (743)
Q Consensus 327 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 406 (743)
+.+|+.|++.+|+++.. ..+..+++|++|++++|.+++..+ +..+++|+++++++|.++.+ ..+..+++|+.++
T Consensus 40 l~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~i--~~l~~l~~L~~l~ 113 (227)
T d1h6ua2 40 LDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLD 113 (227)
T ss_dssp HHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEE
T ss_pred cCCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeecccc--cccccccccccccccccccc--ccccccccccccc
Confidence 46899999999999854 358899999999999999986543 88999999999999998854 4688999999999
Q ss_pred CCCCcCcccCchhHHhcccCCcEEEccCCcCcccCCccccCCCCccEEEccCCccccccCccccccccccccCccchhhh
Q 041683 407 LGENELVGSIPSWIGERFSILKILNLRSNKFHGDFPIQLCGLAFLQILDVASNSLSGTIPRCINNLSAMAITDSYDQAVI 486 (743)
Q Consensus 407 Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~~~~ 486 (743)
++++...+ ++.. ...+.++.+.++++.+.... .+..+++|+.|++++|.+.+..+ +.+++
T Consensus 114 l~~~~~~~-~~~~--~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~~~~~--l~~l~------------- 173 (227)
T d1h6ua2 114 LTSTQITD-VTPL--AGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVSDLTP--LANLS------------- 173 (227)
T ss_dssp CTTSCCCC-CGGG--TTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCCCCGG--GTTCT-------------
T ss_pred cccccccc-cchh--ccccchhhhhchhhhhchhh--hhccccccccccccccccccchh--hcccc-------------
Confidence 99999873 3332 25788999999999987443 47788999999999998864322 44433
Q ss_pred hhccccCCCCcccccccceeeeceeeehhcccccccEEEccCCcCcccCchhhcccCCCCEEeCCCCcCcccCCCCCCCC
Q 041683 487 LYSSLRSEGQSEIFEDASLVMKGVLVEYNSILNLVRSIDVSKNIFSGEIPVEVTNLQGLQSLNLSHNLLTGRIPDNIGVM 566 (743)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 566 (743)
.|++|++++|++++. + .+.++++|++|+|++|++++ ++ .++++
T Consensus 174 ---------------------------------~L~~L~Ls~n~l~~l-~-~l~~l~~L~~L~Ls~N~lt~-i~-~l~~l 216 (227)
T d1h6ua2 174 ---------------------------------KLTTLKADDNKISDI-S-PLASLPNLIEVHLKNNQISD-VS-PLANT 216 (227)
T ss_dssp ---------------------------------TCCEEECCSSCCCCC-G-GGGGCTTCCEEECTTSCCCB-CG-GGTTC
T ss_pred ---------------------------------cceecccCCCccCCC-h-hhcCCCCCCEEECcCCcCCC-Cc-ccccC
Confidence 469999999999864 3 38899999999999999995 44 38899
Q ss_pred CCccEEECcC
Q 041683 567 RSIESLDLSA 576 (743)
Q Consensus 567 ~~L~~L~Ls~ 576 (743)
++|+.|++++
T Consensus 217 ~~L~~L~lsn 226 (227)
T d1h6ua2 217 SNLFIVTLTN 226 (227)
T ss_dssp TTCCEEEEEE
T ss_pred CCCCEEEeeC
Confidence 9999999974
No 19
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.71 E-value=7.8e-18 Score=156.94 Aligned_cols=101 Identities=17% Similarity=0.248 Sum_probs=58.1
Q ss_pred cEEEccCCcCcccCchhhcccCCCCEEeCCCCcCcccCCCCCCCCCCccEEECcCCcCCCCCCccccCcCCCCeeeCcCC
Q 041683 522 RSIDVSKNIFSGEIPVEVTNLQGLQSLNLSHNLLTGRIPDNIGVMRSIESLDLSANQLSGQIPQSMSNLSFLNHLNLSNN 601 (743)
Q Consensus 522 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N 601 (743)
++|++++|++++..+..|.++++|++|+|++|+|++..|++|..+++|++|+|++|.+....+.. .-...++.+.+..|
T Consensus 81 ~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~-~~~~~l~~~~l~~~ 159 (192)
T d1w8aa_ 81 QELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA-WFAEWLRKKSLNGG 159 (192)
T ss_dssp CEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGH-HHHHHHHHHCCSGG
T ss_pred ceeeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchH-HHhhhhhhhcccCC
Confidence 55555566555555556666677777777777776666666666777777777777666432211 11233555566666
Q ss_pred cccccCCCCcccCCCCCccccCCC
Q 041683 602 NLVGKIPSSTQLQSFGASSFAGND 625 (743)
Q Consensus 602 ~l~~~~p~~~~~~~l~~~~~~~n~ 625 (743)
.+++..|.. +......++..|.
T Consensus 160 ~~~c~~p~~--l~~~~l~~L~~n~ 181 (192)
T d1w8aa_ 160 AARCGAPSK--VRDVQIKDLPHSE 181 (192)
T ss_dssp GCBBCSSTT--TTTSBGGGSCTTT
T ss_pred CeEeCCChh--hcCCEeeecCHhh
Confidence 666666542 3333444455453
No 20
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71 E-value=7.6e-17 Score=152.42 Aligned_cols=165 Identities=24% Similarity=0.379 Sum_probs=95.5
Q ss_pred CCCCCCEEECCCCCCCCCCchhhcCCCCCCEEEcCCCccccccCcccccCCCCCCEEEcCCCCcCCcccchhccCCCCCC
Q 041683 16 NLTSLKYLDLSSNELNSTVLGWLSKVNDLEFLSVYSNRLQGNVSSLGLENLTSIKRLYLSENDELGGKIPTSFGKLCKLT 95 (743)
Q Consensus 16 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~~~~l~~~~~~~l~~l~~L~ 95 (743)
.+.+|++|++++|.+.... .+..+++|++|++++|.++ .++. ++.+++|++|+++ ++.+++ ++ .+.++++|+
T Consensus 44 ~L~~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~-~l~~--~~~l~~L~~L~l~-~n~i~~-l~-~l~~l~~L~ 115 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLT-DIKP--LANLKNLGWLFLD-ENKVKD-LS-SLKDLKKLK 115 (210)
T ss_dssp HHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECC-SSCCCC-GG-GGTTCTTCC
T ss_pred HhcCccEEECcCCCCCCch--hHhhCCCCCEEeCCCcccc-Cccc--cccCccccccccc-cccccc-cc-ccccccccc
Confidence 3556666777766665442 2566666777777777666 3442 5566667777776 445543 22 466666666
Q ss_pred EEEccCCcCcccchhhhhcccccccCCccEEEccCCcCcccchhhccCCCCCCEEECcCccCccccchhccCCCCCCEEE
Q 041683 96 SFSMRFTKLSQDISEILGIFSACVANELESLRLGSSQIFGHLTNQLRRFKRLNSLDLSNTILDGSIPFSLGQISNLEYLD 175 (743)
Q Consensus 96 ~L~L~~n~l~~~~~~~l~~l~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 175 (743)
.|++++|.+.. ...+..++ +++.+++++|.+... ..+..+++|+++++++|.+++. + .++++++|++|+
T Consensus 116 ~L~l~~~~~~~--~~~l~~l~-----~l~~l~~~~n~l~~~--~~~~~l~~L~~l~l~~n~l~~i-~-~l~~l~~L~~L~ 184 (210)
T d1h6ta2 116 SLSLEHNGISD--INGLVHLP-----QLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI-V-PLAGLTKLQNLY 184 (210)
T ss_dssp EEECTTSCCCC--CGGGGGCT-----TCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEE
T ss_pred ccccccccccc--cccccccc-----ccccccccccccccc--cccccccccccccccccccccc-c-cccCCCCCCEEE
Confidence 66666665543 12333444 566666666665432 2355566666666666666543 2 255666666666
Q ss_pred ccCCCCccccChhhhcCCCCCCEEECC
Q 041683 176 LSNNKLNGTVSEIHFVNLTKLAFFRAN 202 (743)
Q Consensus 176 L~~n~l~~~~~~~~~~~l~~L~~L~l~ 202 (743)
+++|+++ .++ .+.++++|++|+++
T Consensus 185 Ls~N~i~-~l~--~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 185 LSKNHIS-DLR--ALAGLKNLDVLELF 208 (210)
T ss_dssp CCSSCCC-BCG--GGTTCTTCSEEEEE
T ss_pred CCCCCCC-CCh--hhcCCCCCCEEEcc
Confidence 6666665 343 25666666666654
No 21
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.70 E-value=1.6e-16 Score=148.89 Aligned_cols=163 Identities=23% Similarity=0.391 Sum_probs=92.7
Q ss_pred CCCCCCCEEECCCCCCCCCCchhhcCCCCCCEEEcCCCccccccCcccccCCCCCCEEEcCCCCcCCcccchhccCCCCC
Q 041683 15 GNLTSLKYLDLSSNELNSTVLGWLSKVNDLEFLSVYSNRLQGNVSSLGLENLTSIKRLYLSENDELGGKIPTSFGKLCKL 94 (743)
Q Consensus 15 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~~~~l~~~~~~~l~~l~~L 94 (743)
..++++++|++++|++..+ +.++.+++|++|++++|+++ .++. ++++++|++|+++ ++.+.. ++ .+.++++|
T Consensus 37 ~~l~~l~~L~l~~~~i~~l--~~l~~l~nL~~L~Ls~N~l~-~~~~--l~~l~~L~~L~l~-~n~~~~-~~-~l~~l~~L 108 (199)
T d2omxa2 37 TDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLT-DITP--LKNLTKLVDILMN-NNQIAD-IT-PLANLTNL 108 (199)
T ss_dssp HHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECC-SSCCCC-CG-GGTTCTTC
T ss_pred HHhcCCCEEECCCCCCCCc--cccccCCCcCcCcccccccc-Cccc--ccCCccccccccc-cccccc-cc-cccccccc
Confidence 3456666777777666543 23566667777777777666 3332 6666667777776 333332 22 35666666
Q ss_pred CEEEccCCcCcccchhhhhcccccccCCccEEEccCCcCcccchhhccCCCCCCEEECcCccCccccchhccCCCCCCEE
Q 041683 95 TSFSMRFTKLSQDISEILGIFSACVANELESLRLGSSQIFGHLTNQLRRFKRLNSLDLSNTILDGSIPFSLGQISNLEYL 174 (743)
Q Consensus 95 ~~L~L~~n~l~~~~~~~l~~l~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 174 (743)
+.|+++++..... ..+..++ +|+.|++++|++.. + ..+..+++|++|++++|.+++. ..++++++|++|
T Consensus 109 ~~L~l~~~~~~~~--~~~~~l~-----~L~~L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~l--~~l~~l~~L~~L 177 (199)
T d2omxa2 109 TGLTLFNNQITDI--DPLKNLT-----NLNRLELSSNTISD-I-SALSGLTSLQQLNFSSNQVTDL--KPLANLTTLERL 177 (199)
T ss_dssp SEEECCSSCCCCC--GGGTTCT-----TCSEEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCCC--GGGTTCTTCCEE
T ss_pred ccccccccccccc--cccchhh-----hhHHhhhhhhhhcc-c-ccccccccccccccccccccCC--ccccCCCCCCEE
Confidence 6666666655432 2233333 66666666666543 2 2356666666666666666543 235566666666
Q ss_pred EccCCCCccccChhhhcCCCCCCEE
Q 041683 175 DLSNNKLNGTVSEIHFVNLTKLAFF 199 (743)
Q Consensus 175 ~L~~n~l~~~~~~~~~~~l~~L~~L 199 (743)
++++|+++ .++. +..+++|++|
T Consensus 178 ~ls~N~i~-~i~~--l~~L~~L~~L 199 (199)
T d2omxa2 178 DISSNKVS-DISV--LAKLTNLESL 199 (199)
T ss_dssp ECCSSCCC-CCGG--GGGCTTCSEE
T ss_pred ECCCCCCC-CCcc--ccCCCCCCcC
Confidence 66666665 3332 5555555543
No 22
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.70 E-value=2.4e-17 Score=153.58 Aligned_cols=85 Identities=24% Similarity=0.334 Sum_probs=39.6
Q ss_pred cEEEccCCcCcccCchhhcccCCCCEEeCCCCcCcccCCCCCCCCCCccEEECcCCcCCCCCCccccCcCCCCeeeCcCC
Q 041683 522 RSIDVSKNIFSGEIPVEVTNLQGLQSLNLSHNLLTGRIPDNIGVMRSIESLDLSANQLSGQIPQSMSNLSFLNHLNLSNN 601 (743)
Q Consensus 522 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N 601 (743)
+.|++++|.+.+..+..|..+++|++|+|++|+|++..|++|.++++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 57 ~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N 136 (192)
T d1w8aa_ 57 VKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136 (192)
T ss_dssp CEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTC
T ss_pred eeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCccccccccccc
Confidence 33333333333333444444444555555555444444444444445555555555554444444444444555555555
Q ss_pred ccccc
Q 041683 602 NLVGK 606 (743)
Q Consensus 602 ~l~~~ 606 (743)
++.+.
T Consensus 137 ~~~~~ 141 (192)
T d1w8aa_ 137 PFNCN 141 (192)
T ss_dssp CBCCS
T ss_pred ccccc
Confidence 44443
No 23
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.68 E-value=1.6e-16 Score=150.13 Aligned_cols=180 Identities=23% Similarity=0.327 Sum_probs=98.2
Q ss_pred ECcCCcCcccCCccccCCCCCCEEECCCCcCcccCCccccCCCCCcEEEccCccccccCCcccCCCCCCCEEeCCCCcCc
Q 041683 334 KLSKNNFSGDIPDCWMNWLRLRALNLGHNNFTGSLPMSIGTLSSLLSLNLRNNILSGIIPTSFKNFSSLEVLDLGENELV 413 (743)
Q Consensus 334 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~ 413 (743)
.+..+.+.+.++. ..+.+|++|++++|.++.. ..+..+++|++|++++|+++++. .+..+++|++|++++|+++
T Consensus 30 ~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~i~ 103 (210)
T d1h6ta2 30 NLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENKVK 103 (210)
T ss_dssp HTTCSCTTSEECH--HHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred HhCcCccCCccCH--HHhcCccEEECcCCCCCCc--hhHhhCCCCCEEeCCCccccCcc--ccccCcccccccccccccc
Confidence 4444444433321 2345666666666666532 13555666666666666665432 2455666666666666665
Q ss_pred ccCchhHHhcccCCcEEEccCCcCcccCCccccCCCCccEEEccCCccccccCccccccccccccCccchhhhhhccccC
Q 041683 414 GSIPSWIGERFSILKILNLRSNKFHGDFPIQLCGLAFLQILDVASNSLSGTIPRCINNLSAMAITDSYDQAVILYSSLRS 493 (743)
Q Consensus 414 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~ 493 (743)
.++. + ..+++|+.|++++|.+.. + ..+..+++++.+++++|.+.
T Consensus 104 -~l~~-l-~~l~~L~~L~l~~~~~~~-~-~~l~~l~~l~~l~~~~n~l~------------------------------- 147 (210)
T d1h6ta2 104 -DLSS-L-KDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKIT------------------------------- 147 (210)
T ss_dssp -CGGG-G-TTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCC-------------------------------
T ss_pred -cccc-c-cccccccccccccccccc-c-cccccccccccccccccccc-------------------------------
Confidence 3442 2 235555555555555542 1 23444455555555555443
Q ss_pred CCCcccccccceeeeceeeehhcccccccEEEccCCcCcccCchhhcccCCCCEEeCCCCcCcccCCCCCCCCCCccEEE
Q 041683 494 EGQSEIFEDASLVMKGVLVEYNSILNLVRSIDVSKNIFSGEIPVEVTNLQGLQSLNLSHNLLTGRIPDNIGVMRSIESLD 573 (743)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 573 (743)
+ +..+..+++|+.+++++|++++ ++ .+.++++|++|+
T Consensus 148 ---------------------------------------~--~~~~~~l~~L~~l~l~~n~l~~-i~-~l~~l~~L~~L~ 184 (210)
T d1h6ta2 148 ---------------------------------------D--ITVLSRLTKLDTLSLEDNQISD-IV-PLAGLTKLQNLY 184 (210)
T ss_dssp ---------------------------------------C--CGGGGGCTTCSEEECCSSCCCC-CG-GGTTCTTCCEEE
T ss_pred ---------------------------------------c--cccccccccccccccccccccc-cc-cccCCCCCCEEE
Confidence 2 1234456666777777776663 22 266667777777
Q ss_pred CcCCcCCCCCCccccCcCCCCeeeCcC
Q 041683 574 LSANQLSGQIPQSMSNLSFLNHLNLSN 600 (743)
Q Consensus 574 Ls~N~l~~~~p~~l~~l~~L~~L~ls~ 600 (743)
+++|+++. +| .+.++++|++|+|++
T Consensus 185 Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 185 LSKNHISD-LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp CCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred CCCCCCCC-Ch-hhcCCCCCCEEEccC
Confidence 77777663 33 366677777777653
No 24
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.65 E-value=1.6e-15 Score=141.97 Aligned_cols=169 Identities=23% Similarity=0.362 Sum_probs=115.4
Q ss_pred CCCCCEEECCCCCCCCCCchhhcCCCCCCEEEcCCCccccccCcccccCCCCCCEEEcCCCCcCCcccchhccCCCCCCE
Q 041683 17 LTSLKYLDLSSNELNSTVLGWLSKVNDLEFLSVYSNRLQGNVSSLGLENLTSIKRLYLSENDELGGKIPTSFGKLCKLTS 96 (743)
Q Consensus 17 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~~~~l~~~~~~~l~~l~~L~~ 96 (743)
+++...+.++.+.+++... ...++++++|++++|.++ .++ .++.+++|++|+++ +|.+++..+ ++++++|++
T Consensus 17 l~~~i~~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~-~l~--~l~~l~nL~~L~Ls-~N~l~~~~~--l~~l~~L~~ 88 (199)
T d2omxa2 17 LAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK-SID--GVEYLNNLTQINFS-NNQLTDITP--LKNLTKLVD 88 (199)
T ss_dssp HHHHHHHHTTCSSTTSEEC--HHHHTTCCEEECTTSCCC-CCT--TGGGCTTCCEEECC-SSCCCCCGG--GTTCTTCCE
T ss_pred HHHHHHHHhCCCCCCCccC--HHHhcCCCEEECCCCCCC-Ccc--ccccCCCcCcCccc-cccccCccc--ccCCccccc
Confidence 3344455677777766433 346788999999999987 565 47888999999998 567765433 788888888
Q ss_pred EEccCCcCcccchhhhhcccccccCCccEEEccCCcCcccchhhccCCCCCCEEECcCccCccccchhccCCCCCCEEEc
Q 041683 97 FSMRFTKLSQDISEILGIFSACVANELESLRLGSSQIFGHLTNQLRRFKRLNSLDLSNTILDGSIPFSLGQISNLEYLDL 176 (743)
Q Consensus 97 L~L~~n~l~~~~~~~l~~l~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 176 (743)
|++++|.+... + .+..+. .|+.|++++|.+... ..+..+++|+.|++++|.+.. + ..+..+++|++|++
T Consensus 89 L~l~~n~~~~~-~-~l~~l~-----~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~l~~~~~L~~L~l 157 (199)
T d2omxa2 89 ILMNNNQIADI-T-PLANLT-----NLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISD-I-SALSGLTSLQQLNF 157 (199)
T ss_dssp EECCSSCCCCC-G-GGTTCT-----TCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-C-GGGTTCTTCSEEEC
T ss_pred ccccccccccc-c-cccccc-----ccccccccccccccc--cccchhhhhHHhhhhhhhhcc-c-cccccccccccccc
Confidence 88888876542 2 244444 777777777776543 236677777777777777763 2 35667777777777
Q ss_pred cCCCCccccChhhhcCCCCCCEEECCCCcce
Q 041683 177 SNNKLNGTVSEIHFVNLTKLAFFRANGNSLI 207 (743)
Q Consensus 177 ~~n~l~~~~~~~~~~~l~~L~~L~l~~n~~~ 207 (743)
++|+++ .++. +.++++|++|++++|+++
T Consensus 158 ~~n~l~-~l~~--l~~l~~L~~L~ls~N~i~ 185 (199)
T d2omxa2 158 SSNQVT-DLKP--LANLTTLERLDISSNKVS 185 (199)
T ss_dssp CSSCCC-CCGG--GTTCTTCCEEECCSSCCC
T ss_pred cccccc-CCcc--ccCCCCCCEEECCCCCCC
Confidence 777776 3332 666666666666666654
No 25
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=2.1e-15 Score=149.56 Aligned_cols=227 Identities=17% Similarity=0.162 Sum_probs=138.0
Q ss_pred ccEEECcCCcCcccCCccccCCCCCCEEECCCCcCccc-CCccccCCCCCcEEEccCccccccCCcccCCCCCCCEEeCC
Q 041683 330 IEFLKLSKNNFSGDIPDCWMNWLRLRALNLGHNNFTGS-LPMSIGTLSSLLSLNLRNNILSGIIPTSFKNFSSLEVLDLG 408 (743)
Q Consensus 330 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls 408 (743)
+..+.++...+..... ......+|++||++++.++.. +...+..+++|++|++++|.+++..+..+..+++|++|+++
T Consensus 25 ~~~lrl~~~~~~~~~~-~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls 103 (284)
T d2astb2 25 VIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLS 103 (284)
T ss_dssp CSEEECTTCEECSCCC-SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECT
T ss_pred ceEeeccccccccchh-hhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCcccc
Confidence 4566666655543222 233456789999998887643 34456778899999999998877777778888899999998
Q ss_pred CC-cCcccCchhHHhcccCCcEEEccCCc-Cccc-CCcccc-CCCCccEEEccCCc--cccccCccccccccccccCccc
Q 041683 409 EN-ELVGSIPSWIGERFSILKILNLRSNK-FHGD-FPIQLC-GLAFLQILDVASNS--LSGTIPRCINNLSAMAITDSYD 482 (743)
Q Consensus 409 ~n-~i~~~~~~~~~~~l~~L~~L~L~~n~-l~~~-~~~~~~-~l~~L~~L~Ls~N~--l~~~~p~~~~~l~~L~~~~~~~ 482 (743)
+| .+++..-..+...+++|++|++++|. ++.. ....+. ..++|+.|+++++. ++.. .+..
T Consensus 104 ~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~---~l~~----------- 169 (284)
T d2astb2 104 GCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKS---DLST----------- 169 (284)
T ss_dssp TCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHH---HHHH-----------
T ss_pred ccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhcccccccccc---cccc-----------
Confidence 86 45432222344568889999998864 3321 111222 24678888887653 2210 0000
Q ss_pred hhhhhhccccCCCCcccccccceeeeceeeehhcccccccEEEccCC-cCcccCchhhcccCCCCEEeCCCC-cCcccCC
Q 041683 483 QAVILYSSLRSEGQSEIFEDASLVMKGVLVEYNSILNLVRSIDVSKN-IFSGEIPVEVTNLQGLQSLNLSHN-LLTGRIP 560 (743)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n-~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~p 560 (743)
....+++|++|++++| .+++.....+.++++|++|+|++| .+++...
T Consensus 170 -------------------------------l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l 218 (284)
T d2astb2 170 -------------------------------LVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETL 218 (284)
T ss_dssp -------------------------------HHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGG
T ss_pred -------------------------------cccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHH
Confidence 0112445677777775 466666666777777888888774 4665555
Q ss_pred CCCCCCCCccEEECcCCcCCCCCCccccCc-CCCCeeeCcCCccccc
Q 041683 561 DNIGVMRSIESLDLSANQLSGQIPQSMSNL-SFLNHLNLSNNNLVGK 606 (743)
Q Consensus 561 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~ls~N~l~~~ 606 (743)
..++.+++|+.|+++++ ++. ..+..+ ..+..|++..++++..
T Consensus 219 ~~L~~~~~L~~L~l~~~-~~d---~~l~~l~~~lp~L~i~~~~ls~~ 261 (284)
T d2astb2 219 LELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTI 261 (284)
T ss_dssp GGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCT
T ss_pred HHHhcCCCCCEEeeeCC-CCH---HHHHHHHHhCccccccCccCCCC
Confidence 56677777777777776 321 112111 2344455555666544
No 26
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=8.3e-15 Score=145.21 Aligned_cols=248 Identities=18% Similarity=0.183 Sum_probs=154.1
Q ss_pred CEEECCCCCCCCCCchhhcCCCCCCEEEcCCCccccccCcccccCCCCCCEEEcCCCCcCCcc-cchhccCCCCCCEEEc
Q 041683 21 KYLDLSSNELNSTVLGWLSKVNDLEFLSVYSNRLQGNVSSLGLENLTSIKRLYLSENDELGGK-IPTSFGKLCKLTSFSM 99 (743)
Q Consensus 21 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~~~~l~~~-~~~~l~~l~~L~~L~L 99 (743)
++|||+++.+.......+.. ..+..+.++...+...+. ......+|++||++ ++.+... +...+.++++|++|++
T Consensus 3 ~~lDLs~~~l~~~~l~~l~~-~~~~~lrl~~~~~~~~~~--~~~~~~~L~~LdLs-~~~i~~~~l~~l~~~c~~L~~L~L 78 (284)
T d2astb2 3 QTLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLA--EHFSPFRVQHMDLS-NSVIEVSTLHGILSQCSKLQNLSL 78 (284)
T ss_dssp SEEECTTCBCCHHHHHHHHH-TTCSEEECTTCEECSCCC--SCCCCBCCCEEECT-TCEECHHHHHHHHTTBCCCSEEEC
T ss_pred CEEECCCCCCCchHHHHHHh-ccceEeeccccccccchh--hhccCCCCCEEECC-CCccCHHHHHHHHHhCCCcccccc
Confidence 47888887764322221111 245667776665542222 23455678888888 5555433 3455778888888888
Q ss_pred cCCcCcccchhhhhcccccccCCccEEEccCCc-Cccc-chhhccCCCCCCEEECcCc-cCccc-cchhcc-CCCCCCEE
Q 041683 100 RFTKLSQDISEILGIFSACVANELESLRLGSSQ-IFGH-LTNQLRRFKRLNSLDLSNT-ILDGS-IPFSLG-QISNLEYL 174 (743)
Q Consensus 100 ~~n~l~~~~~~~l~~l~~~~~~~L~~L~L~~n~-~~~~-~~~~l~~l~~L~~L~Ls~n-~l~~~-~~~~~~-~l~~L~~L 174 (743)
+++.++...+..+...+ +|++|++++|. ++.. +...+..+++|++|++++| .+++. ....+. ..++|+.|
T Consensus 79 ~~~~l~~~~~~~l~~~~-----~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L 153 (284)
T d2astb2 79 EGLRLSDPIVNTLAKNS-----NLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQL 153 (284)
T ss_dssp TTCBCCHHHHHHHTTCT-----TCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEE
T ss_pred cccCCCcHHHHHHhcCC-----CCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchh
Confidence 88887776666666665 88888888864 4322 2223456788888888886 34422 122233 34788888
Q ss_pred EccCCC--CccccChhhhcCCCCCCEEECCCCc-ceeecCCCCCCCccccEEEcCCC-cCCCCcchhhcCCCCCCEEEcc
Q 041683 175 DLSNNK--LNGTVSEIHFVNLTKLAFFRANGNS-LIFKINPNWVPPFQLTVLELRSC-HLGPRFPLWLQSQRELNDLDIS 250 (743)
Q Consensus 175 ~L~~n~--l~~~~~~~~~~~l~~L~~L~l~~n~-~~~~~~~~~~~~~~L~~L~l~~n-~l~~~~~~~l~~l~~L~~L~l~ 250 (743)
+++++. ++...-.....++++|++|++++|. ++......+..+++|++|++++| .+++.....+..+++|+.|+++
T Consensus 154 ~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~ 233 (284)
T d2astb2 154 NLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVF 233 (284)
T ss_dssp ECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECT
T ss_pred hhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeee
Confidence 888753 3321111134567888888888764 55455556677788888888886 4665666677888999999998
Q ss_pred CCCCccccChhhhhhcccCceEecccCcccc
Q 041683 251 STRISAKIPRGFWNSIYQYFYLNISGNQIYG 281 (743)
Q Consensus 251 ~n~i~~~~~~~~~~~l~~L~~L~l~~n~l~~ 281 (743)
++ +++..-..+...+++| .+..+.++.
T Consensus 234 ~~-~~d~~l~~l~~~lp~L---~i~~~~ls~ 260 (284)
T d2astb2 234 GI-VPDGTLQLLKEALPHL---QINCSHFTT 260 (284)
T ss_dssp TS-SCTTCHHHHHHHSTTS---EESCCCSCC
T ss_pred CC-CCHHHHHHHHHhCccc---cccCccCCC
Confidence 87 4433333344445554 445555554
No 27
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.51 E-value=9.1e-16 Score=157.49 Aligned_cols=242 Identities=15% Similarity=0.172 Sum_probs=160.2
Q ss_pred CCCCCCccEEECcCCcCccc----CCccccCCCCCCEEECCCCcCccc----------CCccccCCCCCcEEEccCcccc
Q 041683 324 ENFSNNIEFLKLSKNNFSGD----IPDCWMNWLRLRALNLGHNNFTGS----------LPMSIGTLSSLLSLNLRNNILS 389 (743)
Q Consensus 324 ~~~~~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~Ls~n~l~~~----------~~~~~~~l~~L~~L~L~~n~i~ 389 (743)
+....++++|+|++|.+... +...+...++|+.++++++..... +...+..+++|++|++++|.+.
T Consensus 27 L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 106 (344)
T d2ca6a1 27 LLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFG 106 (344)
T ss_dssp HHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCC
T ss_pred HhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccccc
Confidence 34467889999999887632 234566778899999987765421 1223456788999999999887
Q ss_pred ccC----CcccCCCCCCCEEeCCCCcCcccCchhH------------HhcccCCcEEEccCCcCccc----CCccccCCC
Q 041683 390 GII----PTSFKNFSSLEVLDLGENELVGSIPSWI------------GERFSILKILNLRSNKFHGD----FPIQLCGLA 449 (743)
Q Consensus 390 ~~~----~~~~~~l~~L~~L~Ls~n~i~~~~~~~~------------~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~ 449 (743)
... ...+..+++|++|++++|.+.......+ ....+.|+.+.+++|.+... +...+...+
T Consensus 107 ~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~ 186 (344)
T d2ca6a1 107 PTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHR 186 (344)
T ss_dssp TTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCT
T ss_pred cccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhh
Confidence 542 2344567889999999998752211111 12456789999999887632 223355678
Q ss_pred CccEEEccCCccccccCccccccccccccCccchhhhhhccccCCCCcccccccceeeeceeeehhcccccccEEEccCC
Q 041683 450 FLQILDVASNSLSGTIPRCINNLSAMAITDSYDQAVILYSSLRSEGQSEIFEDASLVMKGVLVEYNSILNLVRSIDVSKN 529 (743)
Q Consensus 450 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n 529 (743)
.|+.|++++|.+.......+ + .......+.|+.|++++|
T Consensus 187 ~L~~L~L~~n~i~~~g~~~~--l---------------------------------------~~~l~~~~~L~~L~Ls~N 225 (344)
T d2ca6a1 187 LLHTVKMVQNGIRPEGIEHL--L---------------------------------------LEGLAYCQELKVLDLQDN 225 (344)
T ss_dssp TCCEEECCSSCCCHHHHHHH--H---------------------------------------HTTGGGCTTCCEEECCSS
T ss_pred hhcccccccccccccccccc--h---------------------------------------hhhhcchhhhcccccccc
Confidence 89999999998763210000 0 001122445789999999
Q ss_pred cCccc----CchhhcccCCCCEEeCCCCcCcccCCCC----CC--CCCCccEEECcCCcCCCCC----Ccccc-CcCCCC
Q 041683 530 IFSGE----IPVEVTNLQGLQSLNLSHNLLTGRIPDN----IG--VMRSIESLDLSANQLSGQI----PQSMS-NLSFLN 594 (743)
Q Consensus 530 ~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~--~l~~L~~L~Ls~N~l~~~~----p~~l~-~l~~L~ 594 (743)
.++.. +...+..+++|++|+|++|.+++..... +. ..+.|++|++++|+|+... ...+. +.++|+
T Consensus 226 ~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~ 305 (344)
T d2ca6a1 226 TFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLL 305 (344)
T ss_dssp CCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCC
T ss_pred cccccccccccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCC
Confidence 98643 4456778899999999999987532222 22 2367999999999987432 23332 467899
Q ss_pred eeeCcCCccccc
Q 041683 595 HLNLSNNNLVGK 606 (743)
Q Consensus 595 ~L~ls~N~l~~~ 606 (743)
+|++++|.+...
T Consensus 306 ~L~l~~N~~~~~ 317 (344)
T d2ca6a1 306 FLELNGNRFSEE 317 (344)
T ss_dssp EEECTTSBSCTT
T ss_pred EEECCCCcCCCc
Confidence 999999998643
No 28
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=3.2e-14 Score=127.28 Aligned_cols=89 Identities=16% Similarity=0.192 Sum_probs=65.9
Q ss_pred CCCCCCCCCEEECCCCCCCCCCchhhcCCCCCCEEEcCCCccccccCcccccCCCCCCEEEcCCCCcCCcccchhccCCC
Q 041683 13 RLGNLTSLKYLDLSSNELNSTVLGWLSKVNDLEFLSVYSNRLQGNVSSLGLENLTSIKRLYLSENDELGGKIPTSFGKLC 92 (743)
Q Consensus 13 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~~~~l~~~~~~~l~~l~ 92 (743)
.|.+...+|+|||++|+|+.+ +..+..+++|++|+|++|.++ .++ .|..+++|++|+++ +|.++...+..+..++
T Consensus 13 ~~~n~~~lr~L~L~~n~I~~i-~~~~~~l~~L~~L~Ls~N~i~-~l~--~~~~l~~L~~L~ls-~N~i~~l~~~~~~~l~ 87 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIR-KLD--GFPLLRRLKTLLVN-NNRICRIGEGLDQALP 87 (162)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCC-EEC--CCCCCSSCCEEECC-SSCCCEECSCHHHHCT
T ss_pred hccCcCcCcEEECCCCCCCcc-CccccccccCCEEECCCCCCC-ccC--CcccCcchhhhhcc-cccccCCCcccccccc
Confidence 467777888888888888666 456677888888888888887 665 47788888888888 6666655555556677
Q ss_pred CCCEEEccCCcCcc
Q 041683 93 KLTSFSMRFTKLSQ 106 (743)
Q Consensus 93 ~L~~L~L~~n~l~~ 106 (743)
+|++|++++|++..
T Consensus 88 ~L~~L~L~~N~i~~ 101 (162)
T d1a9na_ 88 DLTELILTNNSLVE 101 (162)
T ss_dssp TCCEEECCSCCCCC
T ss_pred ccccceeccccccc
Confidence 77777777776643
No 29
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=4.5e-14 Score=126.26 Aligned_cols=125 Identities=17% Similarity=0.093 Sum_probs=87.4
Q ss_pred CCCccEEECcCCcCcccCCccccCCCCCCEEECCCCcCcccCCccccCCCCCcEEEccCccccccCCcccCCCCCCCEEe
Q 041683 327 SNNIEFLKLSKNNFSGDIPDCWMNWLRLRALNLGHNNFTGSLPMSIGTLSSLLSLNLRNNILSGIIPTSFKNFSSLEVLD 406 (743)
Q Consensus 327 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 406 (743)
+.++++|+|++|+|+.+ +..+..+++|+.|++++|+++.. +.|..+++|++|++++|.++.+.+..+..+++|++|+
T Consensus 17 ~~~lr~L~L~~n~I~~i-~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~ 93 (162)
T d1a9na_ 17 AVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 93 (162)
T ss_dssp TTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred cCcCcEEECCCCCCCcc-CccccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCccccccccccccce
Confidence 45678888888888744 55667778888888888888743 3477778888888888888766666667778888888
Q ss_pred CCCCcCcccCch-hHHhcccCCcEEEccCCcCcccCC---ccccCCCCccEEE
Q 041683 407 LGENELVGSIPS-WIGERFSILKILNLRSNKFHGDFP---IQLCGLAFLQILD 455 (743)
Q Consensus 407 Ls~n~i~~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~ 455 (743)
+++|++. .++. .....+++|++|++++|++..... ..+..+++|++||
T Consensus 94 L~~N~i~-~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 94 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred ecccccc-ccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 8888776 4443 223357778888888887763221 2356677777776
No 30
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.45 E-value=7.3e-14 Score=143.02 Aligned_cols=137 Identities=15% Similarity=0.137 Sum_probs=63.9
Q ss_pred CCCCCEEECcCccCcccc----chhccCCCCCCEEEccCCCCccc----cChhhhcCCCCCCEEECCCCcceee----cC
Q 041683 144 FKRLNSLDLSNTILDGSI----PFSLGQISNLEYLDLSNNKLNGT----VSEIHFVNLTKLAFFRANGNSLIFK----IN 211 (743)
Q Consensus 144 l~~L~~L~Ls~n~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~~l~~L~~L~l~~n~~~~~----~~ 211 (743)
.+.|+.+++++|.++... ...+..++.|++|++++|++... .-...+..+++|+.|++++|.+... +.
T Consensus 157 ~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~ 236 (344)
T d2ca6a1 157 APPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALA 236 (344)
T ss_dssp CCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHH
T ss_pred Ccccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhccccccccccccccccccc
Confidence 344445555444443211 12233344455555555544311 0011234444555555555544321 11
Q ss_pred CCCCCCccccEEEcCCCcCCCCcc----hhhcC--CCCCCEEEccCCCCccccCh----hhhhhcccCceEecccCccc
Q 041683 212 PNWVPPFQLTVLELRSCHLGPRFP----LWLQS--QRELNDLDISSTRISAKIPR----GFWNSIYQYFYLNISGNQIY 280 (743)
Q Consensus 212 ~~~~~~~~L~~L~l~~n~l~~~~~----~~l~~--l~~L~~L~l~~n~i~~~~~~----~~~~~l~~L~~L~l~~n~l~ 280 (743)
..+..+++|++|++++|.++.... ..+.. .+.|++|++++|.++..... .+....+.|++|++++|.+.
T Consensus 237 ~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~ 315 (344)
T d2ca6a1 237 IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 315 (344)
T ss_dssp HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred ccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCC
Confidence 223344455555555555543222 22222 35677888888877643222 22234567777887777764
No 31
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.41 E-value=8.7e-13 Score=111.75 Aligned_cols=78 Identities=21% Similarity=0.308 Sum_probs=47.7
Q ss_pred CEEECCCCCCCCCCchhhcCCCCCCEEEcCCCccccccCcccccCCCCCCEEEcCCCCcCCcccchhccCCCCCCEEEcc
Q 041683 21 KYLDLSSNELNSTVLGWLSKVNDLEFLSVYSNRLQGNVSSLGLENLTSIKRLYLSENDELGGKIPTSFGKLCKLTSFSMR 100 (743)
Q Consensus 21 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~~~~l~~~~~~~l~~l~~L~~L~L~ 100 (743)
|+|+|++|+++... .+..+++|++|++++|.++ .+|. .++.+++|++|+++ +|.+++. | .+.++++|++|+++
T Consensus 1 R~L~Ls~n~l~~l~--~l~~l~~L~~L~ls~N~l~-~lp~-~~~~l~~L~~L~l~-~N~i~~l-~-~~~~l~~L~~L~l~ 73 (124)
T d1dcea3 1 RVLHLAHKDLTVLC--HLEQLLLVTHLDLSHNRLR-ALPP-ALAALRCLEVLQAS-DNALENV-D-GVANLPRLQELLLC 73 (124)
T ss_dssp SEEECTTSCCSSCC--CGGGGTTCCEEECCSSCCC-CCCG-GGGGCTTCCEEECC-SSCCCCC-G-GGTTCSSCCEEECC
T ss_pred CEEEcCCCCCCCCc--ccccCCCCCEEECCCCccC-cchh-hhhhhhcccccccc-ccccccc-C-ccccccccCeEECC
Confidence 56777777775442 3666677777777777776 5665 56667777777776 4455432 2 35556666666666
Q ss_pred CCcCc
Q 041683 101 FTKLS 105 (743)
Q Consensus 101 ~n~l~ 105 (743)
+|++.
T Consensus 74 ~N~i~ 78 (124)
T d1dcea3 74 NNRLQ 78 (124)
T ss_dssp SSCCC
T ss_pred CCccC
Confidence 55554
No 32
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.40 E-value=6.2e-13 Score=112.66 Aligned_cols=102 Identities=25% Similarity=0.321 Sum_probs=63.5
Q ss_pred cEEECcCCcCcccCCccccCCCCCCEEECCCCcCcccCCccccCCCCCcEEEccCccccccCCcccCCCCCCCEEeCCCC
Q 041683 331 EFLKLSKNNFSGDIPDCWMNWLRLRALNLGHNNFTGSLPMSIGTLSSLLSLNLRNNILSGIIPTSFKNFSSLEVLDLGEN 410 (743)
Q Consensus 331 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n 410 (743)
+.|++++|+++. ++ .+..+++|++|++++|+++ .+|..+..+++|++|++++|.+++. + .+..+++|++|++++|
T Consensus 1 R~L~Ls~n~l~~-l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l-~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLTV-LC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-D-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCSS-CC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCCC-Cc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccccc-C-ccccccccCeEECCCC
Confidence 356777777763 23 3666677777777777776 4455666677777777777777643 2 3666677777777777
Q ss_pred cCcccCch-hHHhcccCCcEEEccCCcCc
Q 041683 411 ELVGSIPS-WIGERFSILKILNLRSNKFH 438 (743)
Q Consensus 411 ~i~~~~~~-~~~~~l~~L~~L~L~~n~l~ 438 (743)
++. .++. ..+..+++|++|++++|++.
T Consensus 76 ~i~-~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 76 RLQ-QSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCC-SSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred ccC-CCCCchhhcCCCCCCEEECCCCcCC
Confidence 765 3332 22235666666666666665
No 33
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25 E-value=1.4e-11 Score=108.95 Aligned_cols=86 Identities=20% Similarity=0.181 Sum_probs=69.3
Q ss_pred ccEEEccCC-cCcccCchhhcccCCCCEEeCCCCcCcccCCCCCCCCCCccEEECcCCcCCCCCCccccCcCCCCeeeCc
Q 041683 521 VRSIDVSKN-IFSGEIPVEVTNLQGLQSLNLSHNLLTGRIPDNIGVMRSIESLDLSANQLSGQIPQSMSNLSFLNHLNLS 599 (743)
Q Consensus 521 L~~L~Ls~n-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls 599 (743)
+++|++++| .++...+..|.++++|+.|+|++|+|+...|.+|..+++|++|+|++|+|+...+..|.. ..|++|+|+
T Consensus 33 l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~-~~l~~L~L~ 111 (156)
T d2ifga3 33 LTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG-LSLQELVLS 111 (156)
T ss_dssp CSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS-CCCCEEECC
T ss_pred cCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhcc-ccccccccC
Confidence 466777655 366666777889999999999999999777888999999999999999999555555654 479999999
Q ss_pred CCcccccC
Q 041683 600 NNNLVGKI 607 (743)
Q Consensus 600 ~N~l~~~~ 607 (743)
+|++.+..
T Consensus 112 ~Np~~C~C 119 (156)
T d2ifga3 112 GNPLHCSC 119 (156)
T ss_dssp SSCCCCCG
T ss_pred CCcccCCc
Confidence 99997654
No 34
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.25 E-value=2e-13 Score=126.53 Aligned_cols=115 Identities=22% Similarity=0.290 Sum_probs=63.3
Q ss_pred cCchhHHhcccCCcEEEccCCcCcccCCccccCCCCccEEEccCCccccccCccccccccccccCccchhhhhhccccCC
Q 041683 415 SIPSWIGERFSILKILNLRSNKFHGDFPIQLCGLAFLQILDVASNSLSGTIPRCINNLSAMAITDSYDQAVILYSSLRSE 494 (743)
Q Consensus 415 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~~~~~~~~~~~~~~~~~ 494 (743)
.++..+. .+++|++|+|++|+++. ++ .+..+++|+.|++++|++. .+|..+..
T Consensus 39 ~l~~sl~-~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~----------------------- 91 (198)
T d1m9la_ 39 KMDATLS-TLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV----------------------- 91 (198)
T ss_dssp CCHHHHH-HTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHH-----------------------
T ss_pred hhhhHHh-cccccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccc-----------------------
Confidence 3444443 46666666666666663 33 3666666666666666665 22221111
Q ss_pred CCcccccccceeeeceeeehhcccccccEEEccCCcCcccCchhhcccCCCCEEeCCCCcCcccCC-CCCCCCCCccEEE
Q 041683 495 GQSEIFEDASLVMKGVLVEYNSILNLVRSIDVSKNIFSGEIPVEVTNLQGLQSLNLSHNLLTGRIP-DNIGVMRSIESLD 573 (743)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~ 573 (743)
++.|+.|++++|+++.. ..+..+++|+.|++++|+++.... ..+..+++|+.|+
T Consensus 92 -----------------------~~~L~~L~l~~N~i~~l--~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~ 146 (198)
T d1m9la_ 92 -----------------------ADTLEELWISYNQIASL--SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLL 146 (198)
T ss_dssp -----------------------HHHCCEEECSEEECCCH--HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEE
T ss_pred -----------------------ccccccccccccccccc--ccccccccccccccccchhccccccccccCCCccceee
Confidence 12246666666666532 235566666666666666653211 3455666666666
Q ss_pred CcCCcCCC
Q 041683 574 LSANQLSG 581 (743)
Q Consensus 574 Ls~N~l~~ 581 (743)
+++|++..
T Consensus 147 L~~N~l~~ 154 (198)
T d1m9la_ 147 LAGNPLYN 154 (198)
T ss_dssp ECSSHHHH
T ss_pred cCCCcccc
Confidence 66666653
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=1.3e-11 Score=109.16 Aligned_cols=107 Identities=20% Similarity=0.128 Sum_probs=70.6
Q ss_pred CccEEECcCCcCcccCCccccCCCCCCEEECCCC-cCcccCCccccCCCCCcEEEccCccccccCCcccCCCCCCCEEeC
Q 041683 329 NIEFLKLSKNNFSGDIPDCWMNWLRLRALNLGHN-NFTGSLPMSIGTLSSLLSLNLRNNILSGIIPTSFKNFSSLEVLDL 407 (743)
Q Consensus 329 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n-~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 407 (743)
..+.++.+++.+. ..|..+..+++|++|++++| .++.+.+.+|.++++|+.|++++|+|+.+.+.+|..+++|++|+|
T Consensus 9 ~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 87 (156)
T d2ifga3 9 GSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (156)
T ss_dssp SSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceec
Confidence 3455666666665 34555666677777777654 366555566777777777777777777666677777777777777
Q ss_pred CCCcCcccCchhHHhcccCCcEEEccCCcCc
Q 041683 408 GENELVGSIPSWIGERFSILKILNLRSNKFH 438 (743)
Q Consensus 408 s~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~ 438 (743)
++|+++ .+|...+. ...|+.|+|++|.+.
T Consensus 88 s~N~l~-~l~~~~~~-~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 88 SFNALE-SLSWKTVQ-GLSLQELVLSGNPLH 116 (156)
T ss_dssp CSSCCS-CCCSTTTC-SCCCCEEECCSSCCC
T ss_pred cCCCCc-ccChhhhc-cccccccccCCCccc
Confidence 777776 66665553 335777777777664
No 36
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.20 E-value=8.2e-13 Score=122.38 Aligned_cols=127 Identities=16% Similarity=0.229 Sum_probs=68.8
Q ss_pred CCCEEECCCC--CCCCCCchhhcCCCCCCEEEcCCCccccccCcccccCCCCCCEEEcCCCCcCCcccchhccCCCCCCE
Q 041683 19 SLKYLDLSSN--ELNSTVLGWLSKVNDLEFLSVYSNRLQGNVSSLGLENLTSIKRLYLSENDELGGKIPTSFGKLCKLTS 96 (743)
Q Consensus 19 ~L~~L~Ls~n--~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~~~~l~~~~~~~l~~l~~L~~ 96 (743)
.++.+++++. .+ ...+..+..+++|++|+|++|.|+ .++ .+..+++|++|+++ +|.++ .+|.....+++|++
T Consensus 24 ~~~~~~l~~~~~~i-~~l~~sl~~L~~L~~L~Ls~n~I~-~i~--~l~~l~~L~~L~Ls-~N~i~-~i~~~~~~~~~L~~ 97 (198)
T d1m9la_ 24 EAEKVELHGMIPPI-EKMDATLSTLKACKHLALSTNNIE-KIS--SLSGMENLRILSLG-RNLIK-KIENLDAVADTLEE 97 (198)
T ss_dssp TCSCEECCBCCTTC-CCCHHHHHHTTTCCEEECSEEEES-CCC--CHHHHTTCCEEECC-EEEEC-SCSSHHHHHHHCCE
T ss_pred ccceeeeecccCch-hhhhhHHhcccccceeECcccCCC-Ccc--cccCCccccChhhc-ccccc-cccccccccccccc
Confidence 3455566543 22 224556777777777777777776 554 36777777777777 44553 23333333445566
Q ss_pred EEccCCcCcccchhhhhcccccccCCccEEEccCCcCcccch-hhccCCCCCCEEECcCccCc
Q 041683 97 FSMRFTKLSQDISEILGIFSACVANELESLRLGSSQIFGHLT-NQLRRFKRLNSLDLSNTILD 158 (743)
Q Consensus 97 L~L~~n~l~~~~~~~l~~l~~~~~~~L~~L~L~~n~~~~~~~-~~l~~l~~L~~L~Ls~n~l~ 158 (743)
|++++|.++.. ..+..++ +|++|++++|++..... ..+..+++|++|++++|.+.
T Consensus 98 L~l~~N~i~~l--~~~~~l~-----~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 98 LWISYNQIASL--SGIEKLV-----NLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp EECSEEECCCH--HHHHHHH-----HSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHH
T ss_pred ccccccccccc--ccccccc-----cccccccccchhccccccccccCCCccceeecCCCccc
Confidence 66665555431 2233333 55555555555533221 23455555555555555444
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.28 E-value=1.9e-08 Score=89.06 Aligned_cols=121 Identities=24% Similarity=0.128 Sum_probs=70.0
Q ss_pred CccEEECcCCcCcccCCccccCCCCCCEEECCCCcCcccCCccccCCCCCcEEEccCccccccC--CcccCCCCCCCEEe
Q 041683 329 NIEFLKLSKNNFSGDIPDCWMNWLRLRALNLGHNNFTGSLPMSIGTLSSLLSLNLRNNILSGII--PTSFKNFSSLEVLD 406 (743)
Q Consensus 329 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~--~~~~~~l~~L~~L~ 406 (743)
..+.|++++.... ..+..+..+..++..++... .++..+..+++|++|++++|+|+.+. +..+..+++|+.|+
T Consensus 23 ~~~~Ldls~l~~~----~~l~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~ 97 (162)
T d1koha1 23 SQQALDLKGLRSD----PDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILN 97 (162)
T ss_dssp SSCCBCCCCCSSC----TTTTTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCC
T ss_pred hhCeeecccCCCC----chhhhccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccc
Confidence 3455666554432 12333333334444433332 33334456777888888888777543 24456677888888
Q ss_pred CCCCcCcccCchhHHhcccCCcEEEccCCcCcccCCc-------cccCCCCccEEE
Q 041683 407 LGENELVGSIPSWIGERFSILKILNLRSNKFHGDFPI-------QLCGLAFLQILD 455 (743)
Q Consensus 407 Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-------~~~~l~~L~~L~ 455 (743)
+++|.|+ .+++..+-....|+.|++++|++...... .+..+|+|+.||
T Consensus 98 Ls~N~i~-~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 98 LSGNELK-SERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp CTTSCCC-CGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred cccCccc-cchhhhhhhccccceeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC
Confidence 8888886 55543332445678888888877654332 245677777775
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.18 E-value=5.2e-08 Score=86.16 Aligned_cols=105 Identities=25% Similarity=0.217 Sum_probs=57.7
Q ss_pred CCCEEECCCCcCcccCCccccCCCCCcEEEccCccccccCCcccCCCCCCCEEeCCCCcCcccCch--hHHhcccCCcEE
Q 041683 353 RLRALNLGHNNFTGSLPMSIGTLSSLLSLNLRNNILSGIIPTSFKNFSSLEVLDLGENELVGSIPS--WIGERFSILKIL 430 (743)
Q Consensus 353 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~--~~~~~l~~L~~L 430 (743)
..+.|++++++.. ..+..+..+..+...++... .++..+..+++|++|++++|+++ .++. ..+..+++|+.|
T Consensus 23 ~~~~Ldls~l~~~----~~l~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~-~l~~~~~~~~~l~~L~~L 96 (162)
T d1koha1 23 SQQALDLKGLRSD----PDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLY-RLDDMSSIVQKAPNLKIL 96 (162)
T ss_dssp SSCCBCCCCCSSC----TTTTTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCC-CCSGGGTHHHHSTTCCCC
T ss_pred hhCeeecccCCCC----chhhhccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCcccc-CCchhHHHHhhCCccccc
Confidence 3455666655432 12333344444444444333 33344456777777777777776 3321 233457777777
Q ss_pred EccCCcCcccCCccccCCCCccEEEccCCcccc
Q 041683 431 NLRSNKFHGDFPIQLCGLAFLQILDVASNSLSG 463 (743)
Q Consensus 431 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 463 (743)
++++|.+....+..+.....|+.|++++|++..
T Consensus 97 ~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~ 129 (162)
T d1koha1 97 NLSGNELKSERELDKIKGLKLEELWLDGNSLSD 129 (162)
T ss_dssp CCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSS
T ss_pred ccccCccccchhhhhhhccccceeecCCCCcCc
Confidence 777777774433233344456777777776653
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.83 E-value=2.3e-05 Score=68.99 Aligned_cols=110 Identities=12% Similarity=0.117 Sum_probs=50.7
Q ss_pred CCCCCCEEEcCCCCcCCcc----cchhccCCCCCCEEEccCCcCcccchh----hhhcccccccCCccEEEccCCcCccc
Q 041683 65 NLTSIKRLYLSENDELGGK----IPTSFGKLCKLTSFSMRFTKLSQDISE----ILGIFSACVANELESLRLGSSQIFGH 136 (743)
Q Consensus 65 ~l~~L~~L~Ls~~~~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~~~~----~l~~l~~~~~~~L~~L~L~~n~~~~~ 136 (743)
+.++|++|+|++++.+... +..++...++|++|++++|.+...... .+...+ .|++|++++|.+...
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~-----~L~~L~L~~n~i~~~ 87 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSP-----SLRVLNVESNFLTPE 87 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCS-----SCCEEECCSSBCCHH
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcc-----cccceeeehhhcchH
Confidence 3455666666532333221 222345555666666666655432221 122222 455566655555332
Q ss_pred ----chhhccCCCCCCEEECcCccCccc-------cchhccCCCCCCEEEccCC
Q 041683 137 ----LTNQLRRFKRLNSLDLSNTILDGS-------IPFSLGQISNLEYLDLSNN 179 (743)
Q Consensus 137 ----~~~~l~~l~~L~~L~Ls~n~l~~~-------~~~~~~~l~~L~~L~L~~n 179 (743)
+..++...++|++|++++|.+... +...+...+.|+.|+++.+
T Consensus 88 g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 88 LLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFA 141 (167)
T ss_dssp HHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCC
T ss_pred HHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCC
Confidence 122344555566666665544321 1223334455555555444
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.58 E-value=1.5e-05 Score=70.10 Aligned_cols=86 Identities=16% Similarity=0.150 Sum_probs=42.0
Q ss_pred CCCccEEECcCC-cCccc----CCccccCCCCCCEEECCCCcCcccC----CccccCCCCCcEEEccCcccccc----CC
Q 041683 327 SNNIEFLKLSKN-NFSGD----IPDCWMNWLRLRALNLGHNNFTGSL----PMSIGTLSSLLSLNLRNNILSGI----IP 393 (743)
Q Consensus 327 ~~~L~~L~Ls~n-~l~~~----~~~~~~~l~~L~~L~Ls~n~l~~~~----~~~~~~l~~L~~L~L~~n~i~~~----~~ 393 (743)
.+.|++|+|+++ .+... +...+...+.|++|+|++|.+.... ...+...+.|++|++++|.++.. +.
T Consensus 14 ~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~ 93 (167)
T d1pgva_ 14 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 93 (167)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHH
Confidence 466777777653 34321 1223445566666666666665221 12233345555555555555422 11
Q ss_pred cccCCCCCCCEEeCCCCcC
Q 041683 394 TSFKNFSSLEVLDLGENEL 412 (743)
Q Consensus 394 ~~~~~l~~L~~L~Ls~n~i 412 (743)
.++...++|++|++++|.+
T Consensus 94 ~aL~~n~sL~~L~l~~n~~ 112 (167)
T d1pgva_ 94 RSTLVTQSIVEFKADNQRQ 112 (167)
T ss_dssp HHTTTTCCCSEEECCCCSS
T ss_pred HHHHhCCcCCEEECCCCcC
Confidence 2334445555555555543
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.19 E-value=0.00024 Score=62.13 Aligned_cols=115 Identities=19% Similarity=0.176 Sum_probs=51.1
Q ss_pred CCCCCCEEEcCCCCcCCcc----cchhccCCCCCCEEEccCCcCcccchhhhhcccccccCCccEEEccCCcCccc----
Q 041683 65 NLTSIKRLYLSENDELGGK----IPTSFGKLCKLTSFSMRFTKLSQDISEILGIFSACVANELESLRLGSSQIFGH---- 136 (743)
Q Consensus 65 ~l~~L~~L~Ls~~~~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~~~~L~~L~L~~n~~~~~---- 136 (743)
+.+.|++|++++.+.++.. +-.++...++|++|++++|.++......+...-. ....++.+++++|.+...
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~-~~~~l~~l~l~~~~~~~~g~~~ 93 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLK-VNNTLKSLNVESNFISGSGILA 93 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHH-HCSSCCEEECCSSCCCHHHHHH
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHh-hcccchhhhhccccccchhHHH
Confidence 4455666666532333221 2223445566666666666554432222211100 112555666655555322
Q ss_pred chhhccCCCCCCEEEC--cCccCccc----cchhccCCCCCCEEEccCCC
Q 041683 137 LTNQLRRFKRLNSLDL--SNTILDGS----IPFSLGQISNLEYLDLSNNK 180 (743)
Q Consensus 137 ~~~~l~~l~~L~~L~L--s~n~l~~~----~~~~~~~l~~L~~L~L~~n~ 180 (743)
+...+...++|+.++| ++|.+... +...+...+.|++|+++.+.
T Consensus 94 l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 94 LVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCC
Confidence 1233445555655444 33444321 22334445566666655443
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.86 E-value=0.0002 Score=62.67 Aligned_cols=63 Identities=14% Similarity=0.184 Sum_probs=31.2
Q ss_pred CCCccEEECcC-CcCccc----CCccccCCCCCCEEECCCCcCcccC----CccccCCCCCcEEEccCcccc
Q 041683 327 SNNIEFLKLSK-NNFSGD----IPDCWMNWLRLRALNLGHNNFTGSL----PMSIGTLSSLLSLNLRNNILS 389 (743)
Q Consensus 327 ~~~L~~L~Ls~-n~l~~~----~~~~~~~l~~L~~L~Ls~n~l~~~~----~~~~~~l~~L~~L~L~~n~i~ 389 (743)
.++|++|++++ +.++.. +..++...+.|++|++++|.++... ...+...++++.+++++|.+.
T Consensus 16 ~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~ 87 (166)
T d1io0a_ 16 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 87 (166)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred CCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccccc
Confidence 45677777765 334321 1233445566666666666655221 122333445555555555443
Done!