BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041684
(100 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P52866|RL36_DAUCA 60S ribosomal protein L36 OS=Daucus carota GN=RPL36 PE=3 SV=2
Length = 106
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 72/87 (82%)
Query: 2 IAPKLPNTDLFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTI 61
+APK PNT LFVGLNKGH+VTKKEL PRP++RKGKTSKR HF RN+IREVAGF PYEK I
Sbjct: 1 MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRI 60
Query: 62 TELLKVDEDKRALKAAKRKLSTHEGTK 88
TELLKV +DKRALK + K+ + +K
Sbjct: 61 TELLKVGKDKRALKVRQEKVGHSQESK 87
>sp|O80929|RL361_ARATH 60S ribosomal protein L36-1 OS=Arabidopsis thaliana GN=RPL36A
PE=2 SV=1
Length = 113
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 71/88 (80%)
Query: 9 TDLFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVD 68
T LFVGLNKGHVVT++EL PRP +RKGKTSKR F R +IREVAG PYEK ITELLKV
Sbjct: 8 TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVG 67
Query: 69 EDKRALKAAKRKLSTHEGTKTKCEEMSN 96
+DKRALK AKRKL TH+ K K EEMS+
Sbjct: 68 KDKRALKVAKRKLGTHKRAKRKREEMSS 95
>sp|Q9M352|RL362_ARATH 60S ribosomal protein L36-2 OS=Arabidopsis thaliana GN=RPL36B
PE=2 SV=1
Length = 112
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 72/88 (81%)
Query: 9 TDLFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVD 68
T LFVGLNKGHVVT++EL PRP +RKGKTSKR F RN+I+EVAG PYEK ITELLKV
Sbjct: 8 TGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG 67
Query: 69 EDKRALKAAKRKLSTHEGTKTKCEEMSN 96
+DKRALK AKRKL TH+ K K EEMS+
Sbjct: 68 KDKRALKVAKRKLGTHKRAKRKREEMSS 95
>sp|Q9LZ57|RL363_ARATH 60S ribosomal protein L36-3 OS=Arabidopsis thaliana GN=RPL36C
PE=3 SV=1
Length = 108
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 71/88 (80%)
Query: 9 TDLFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVD 68
T LFVGLNKGHVVTK+E PRP NRKGKTSKR F RN+I+EVAG PYEK ITELLKV
Sbjct: 4 TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG 63
Query: 69 EDKRALKAAKRKLSTHEGTKTKCEEMSN 96
+DKRALK AKRKL TH+ K K EEMS+
Sbjct: 64 KDKRALKVAKRKLGTHKRAKRKREEMSS 91
>sp|Q9LRB8|RL36_ENTCP 60S ribosomal protein L36 OS=Enteromorpha compressa GN=RL36 PE=3
SV=1
Length = 101
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 62/87 (71%)
Query: 10 DLFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDE 69
++ VGLNKGH VTKK PRP+ RKG S+RV R V+REVAG+ PYE+ + ELLKV +
Sbjct: 3 EIAVGLNKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGK 62
Query: 70 DKRALKAAKRKLSTHEGTKTKCEEMSN 96
DKRALK KRKL TH K K EEM+
Sbjct: 63 DKRALKMCKRKLGTHMRGKKKREEMAG 89
>sp|Q92365|RL36A_SCHPO 60S ribosomal protein L36-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl36a PE=3 SV=2
Length = 99
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 64/86 (74%)
Query: 11 LFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDED 70
L VGLNKG V+TK++L RP+ RKG+ SKR F R+++REVAGF PYE+ + EL++ +D
Sbjct: 5 LVVGLNKGKVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQD 64
Query: 71 KRALKAAKRKLSTHEGTKTKCEEMSN 96
KRA K AK++L T + K K EE+++
Sbjct: 65 KRARKLAKKRLGTLKRAKGKIEELTS 90
>sp|Q4PM12|RL36_IXOSC 60S ribosomal protein L36 OS=Ixodes scapularis GN=RpL36 PE=3 SV=1
Length = 110
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 59/86 (68%)
Query: 11 LFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDED 70
L VGL KGH VTK E PRP+ RKG SK F R++IREV GF P+E+ ELLKV +D
Sbjct: 7 LAVGLGKGHKVTKNEYKPRPSRRKGALSKHTRFVRDLIREVCGFAPFERRAMELLKVSKD 66
Query: 71 KRALKAAKRKLSTHEGTKTKCEEMSN 96
KRALK K++L TH K K +E+SN
Sbjct: 67 KRALKFIKKRLGTHLRGKRKRDELSN 92
>sp|O94658|RL36B_SCHPO 60S ribosomal protein L36-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl36b PE=3 SV=1
Length = 99
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 62/86 (72%)
Query: 11 LFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDED 70
L VGLNKG +TK++L RP+ RKG SKR F R+++REVAGF PYE+ + EL++ +D
Sbjct: 5 LVVGLNKGKTLTKRQLPERPSRRKGHLSKRTAFVRSIVREVAGFAPYERRVMELIRNSQD 64
Query: 71 KRALKAAKRKLSTHEGTKTKCEEMSN 96
KRA K AK++L T + K K EE+++
Sbjct: 65 KRARKLAKKRLGTLKRAKGKIEELTS 90
>sp|Q6DER2|RL36_XENTR 60S ribosomal protein L36 OS=Xenopus tropicalis GN=rpl36 PE=3
SV=1
Length = 105
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 58/87 (66%)
Query: 11 LFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDED 70
+ VGLNKGH VTK PR R+G+ +K F R++IREV GF PYE+ ELLKV +D
Sbjct: 7 MAVGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKD 66
Query: 71 KRALKAAKRKLSTHEGTKTKCEEMSNA 97
KRALK K+++ TH K K EE+SN
Sbjct: 67 KRALKFIKKRIGTHIRAKRKREELSNV 93
>sp|Q66KU4|RL36_XENLA 60S ribosomal protein L36 OS=Xenopus laevis GN=rpl36 PE=3 SV=1
Length = 105
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 58/87 (66%)
Query: 11 LFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDED 70
+ VGLNKGH VTK PR R+G+ +K F R++IREV GF PYE+ ELLKV +D
Sbjct: 7 MAVGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKD 66
Query: 71 KRALKAAKRKLSTHEGTKTKCEEMSNA 97
KRALK K+++ TH K K EE+SN
Sbjct: 67 KRALKFIKKRIGTHIRAKRKREELSNV 93
>sp|Q5RAZ9|RL36_PONAB 60S ribosomal protein L36 OS=Pongo abelii GN=RPL36 PE=3 SV=3
Length = 105
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 59/87 (67%)
Query: 11 LFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDED 70
+ VGLNKGH VTK PR + R+G+ +K F R++IREV GF PYE+ ELLKV +D
Sbjct: 7 MAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKD 66
Query: 71 KRALKAAKRKLSTHEGTKTKCEEMSNA 97
KRALK K+++ TH K K EE+SN
Sbjct: 67 KRALKFIKKRVGTHIRAKRKREELSNV 93
>sp|Q9Y3U8|RL36_HUMAN 60S ribosomal protein L36 OS=Homo sapiens GN=RPL36 PE=1 SV=3
Length = 105
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 59/87 (67%)
Query: 11 LFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDED 70
+ VGLNKGH VTK PR + R+G+ +K F R++IREV GF PYE+ ELLKV +D
Sbjct: 7 MAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKD 66
Query: 71 KRALKAAKRKLSTHEGTKTKCEEMSNA 97
KRALK K+++ TH K K EE+SN
Sbjct: 67 KRALKFIKKRVGTHIRAKRKREELSNV 93
>sp|Q8UW19|RL36_LAPHA 60S ribosomal protein L36 OS=Lapemis hardwickii GN=RPL36 PE=3
SV=1
Length = 105
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 58/87 (66%)
Query: 11 LFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDED 70
+ VGLNKGH VTK PR R+G+ +K F R++IREV GF PYE+ ELLKV +D
Sbjct: 7 MAVGLNKGHKVTKNVSKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKD 66
Query: 71 KRALKAAKRKLSTHEGTKTKCEEMSNA 97
KRALK K+++ TH K K EE+SN
Sbjct: 67 KRALKFIKKRVGTHIRAKRKREELSNV 93
>sp|Q3T171|RL36_BOVIN 60S ribosomal protein L36 OS=Bos taurus GN=RPL36 PE=3 SV=3
Length = 105
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 59/87 (67%)
Query: 11 LFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDED 70
+ VGLNKGH VTK PR + R+G+ +K F R++IREV GF PYE+ ELLKV +D
Sbjct: 7 MAVGLNKGHKVTKNVGKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKD 66
Query: 71 KRALKAAKRKLSTHEGTKTKCEEMSNA 97
KRALK K+++ TH K K EE+SN
Sbjct: 67 KRALKFIKKRVGTHIRAKRKREELSNV 93
>sp|Q6Q415|RL36_DANRE 60S ribosomal protein L36 OS=Danio rerio GN=rpl36 PE=3 SV=1
Length = 105
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 59/86 (68%)
Query: 11 LFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDED 70
+ VGLNKGH VTK P+ + R+G+ +K F R++IREV GF PYE+ ELLKV +D
Sbjct: 7 MAVGLNKGHKVTKNVSKPKHSRRRGRLTKHAKFARDLIREVCGFAPYERRAMELLKVSKD 66
Query: 71 KRALKAAKRKLSTHEGTKTKCEEMSN 96
KRALK K+++ TH K K EE+SN
Sbjct: 67 KRALKFIKKRVGTHIRAKRKREELSN 92
>sp|P39032|RL36_RAT 60S ribosomal protein L36 OS=Rattus norvegicus GN=Rpl36 PE=1 SV=2
Length = 105
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 58/87 (66%)
Query: 11 LFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDED 70
+ VGLNKGH VTK PR + R+G+ +K F R++IREV F PYE+ ELLKV +D
Sbjct: 7 MAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCAFAPYERRAMELLKVSKD 66
Query: 71 KRALKAAKRKLSTHEGTKTKCEEMSNA 97
KRALK K+++ TH K K EE+SN
Sbjct: 67 KRALKFIKKRVGTHIRAKRKREELSNV 93
>sp|Q98TF6|RL36_CHICK 60S ribosomal protein L36 OS=Gallus gallus GN=RPL36 PE=3 SV=1
Length = 105
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 58/87 (66%)
Query: 11 LFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDED 70
+ VGLNKG+ VTK PR R+G+ +K F R++IREV GF PYE+ ELLKV +D
Sbjct: 7 MAVGLNKGYKVTKNVSKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKD 66
Query: 71 KRALKAAKRKLSTHEGTKTKCEEMSNA 97
KRALK K+++ TH K K EE+SN
Sbjct: 67 KRALKFIKKRVGTHIRAKRKREELSNV 93
>sp|Q90YT2|RL36_ICTPU 60S ribosomal protein L36 OS=Ictalurus punctatus GN=rpl36 PE=3
SV=1
Length = 105
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 57/86 (66%)
Query: 11 LFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDED 70
+ VGL KGH VTK P+ + R G+ +K F R++IREV GF PYE+ ELLKV +D
Sbjct: 7 MAVGLKKGHPVTKNVTKPKHSRRGGRLTKHSKFVRDMIREVCGFAPYERRAMELLKVSKD 66
Query: 71 KRALKAAKRKLSTHEGTKTKCEEMSN 96
KRALK K+++ TH K K EE+SN
Sbjct: 67 KRALKFIKKRVGTHIRAKRKREELSN 92
>sp|P47964|RL36_MOUSE 60S ribosomal protein L36 OS=Mus musculus GN=Rpl36 PE=2 SV=2
Length = 105
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 56/87 (64%)
Query: 11 LFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDED 70
+ VGLNKGH VTK PR + R+ + + F R++IREV GF PYE+ ELLKV +
Sbjct: 7 MAVGLNKGHKVTKNVSKPRHSRRRSRLTNHTKFVRDMIREVCGFAPYERRAMELLKVSKS 66
Query: 71 KRALKAAKRKLSTHEGTKTKCEEMSNA 97
KRALK K+++ TH K K EE+SN
Sbjct: 67 KRALKFIKKRVGTHIRAKRKREELSNV 93
>sp|P0C6E6|RL36X_HUMAN Putative 60S ribosomal protein L36-like 1 OS=Homo sapiens PE=5
SV=1
Length = 105
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%)
Query: 11 LFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDED 70
+ VGLNKGH +TK PR + G+ +K R +I+EV GFTPYE+ ELLKV +D
Sbjct: 7 MVVGLNKGHKLTKNLSKPRHSRSLGRPTKHTKCVRGMIQEVCGFTPYERCTMELLKVSKD 66
Query: 71 KRALKAAKRKLSTHEGTKTKCEEMSNASA 99
K+ALK K+++ TH TK K EE+SN A
Sbjct: 67 KQALKFIKKRVGTHIHTKRKREELSNVLA 95
>sp|P49181|RL36_CAEEL 60S ribosomal protein L36 OS=Caenorhabditis elegans GN=rpl-36
PE=1 SV=3
Length = 104
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%)
Query: 11 LFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDED 70
L VGLNKGH T+ + R KG SK+ R ++RE+ GF PYE+ + E+L++ +D
Sbjct: 9 LAVGLNKGHAATQLPVKQRQNRHKGVASKKTKIVRELVREITGFAPYERRVLEMLRISKD 68
Query: 71 KRALKAAKRKLSTHEGTKTKCEEMSN 96
KRALK KR++ TH K K EE+ N
Sbjct: 69 KRALKFLKRRIGTHRRAKGKREELQN 94
>sp|Q9HFR7|RL36_TRIHM 60S ribosomal protein L36 OS=Trichoderma hamatum GN=rpl36 PE=3
SV=1
Length = 105
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%)
Query: 9 TDLFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVD 68
T L VGLNKGH T + + PR + KG SKR F R V++EVAG PYE+ + ELL+
Sbjct: 9 TGLAVGLNKGHKTTARVVKPRVSRTKGHLSKRTAFVREVVKEVAGLAPYERRVIELLRNS 68
Query: 69 EDKRALKAAKRKLSTHEGTKTKCEEMSNASA 99
+DKRA K AK++L T K K +E+ A
Sbjct: 69 KDKRARKLAKKRLGTFGRAKRKVDELQRVIA 99
>sp|O14455|RL36B_YEAST 60S ribosomal protein L36-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL36B PE=1 SV=3
Length = 100
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 58/91 (63%)
Query: 9 TDLFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVD 68
T + +GLNKG VT+ P+ + +KG S R F R+++RE+AG +PYE+ + +L++
Sbjct: 5 TGIAIGLNKGKKVTQMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNS 64
Query: 69 EDKRALKAAKRKLSTHEGTKTKCEEMSNASA 99
+KRA K AK++L + K K EEM+N A
Sbjct: 65 GEKRARKVAKKRLGSFTRAKAKVEEMNNIIA 95
>sp|P05745|RL36A_YEAST 60S ribosomal protein L36-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL36A PE=1 SV=3
Length = 100
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 57/91 (62%)
Query: 9 TDLFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVD 68
T + +GLNKG VT P+ + +KG S R F R+++RE+AG +PYE+ + +L++
Sbjct: 5 TGIAIGLNKGKKVTSMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNS 64
Query: 69 EDKRALKAAKRKLSTHEGTKTKCEEMSNASA 99
+KRA K AK++L + K K EEM+N A
Sbjct: 65 GEKRARKVAKKRLGSFTRAKAKVEEMNNIIA 95
>sp|Q55AQ9|RL36_DICDI 60S ribosomal protein L36 OS=Dictyostelium discoideum GN=rpl36
PE=3 SV=1
Length = 105
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 9 TDLFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVD 68
+ + G NKGH V K+ + +K +KRV R+VIRE++GF+PYE+ ++ELLK
Sbjct: 12 SGIIKGFNKGHAVAKRTVTS--TFKKQVVTKRVAAIRDVIREISGFSPYERRVSELLKSG 69
Query: 69 EDKRALKAAKRKLSTHEGTKTKCEEMSN 96
DKRALK AK++L + + K K ++++N
Sbjct: 70 LDKRALKVAKKRLGSIQAGKKKRDDIAN 97
>sp|P49630|RL36_DROME 60S ribosomal protein L36 OS=Drosophila melanogaster GN=RpL36 PE=3
SV=1
Length = 115
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 10/97 (10%)
Query: 10 DLFVGLNKGHVVTKKELLPRPANRKGK----------TSKRVHFERNVIREVAGFTPYEK 59
+L +GLNKGH +K + ++K K ++ F R+++REV G PYEK
Sbjct: 6 ELAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEK 65
Query: 60 TITELLKVDEDKRALKAAKRKLSTHEGTKTKCEEMSN 96
ELLKV +DKRALK KR+L TH K K EE+SN
Sbjct: 66 RTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN 102
>sp|Q24F59|RL36_TETTS 60S ribosomal protein L36 OS=Tetrahymena thermophila (strain
SB210) GN=RPL36 PE=1 SV=1
Length = 104
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 13 VGLNKGHVVTK--KELLPRPA-NRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVD- 68
VG+NKG + T+ K+L A RKGK KRV R VIREV GF PYEK I EL+K
Sbjct: 7 VGINKGFITTQLEKKLQKHSAVQRKGKLGKRVALVRQVIREVTGFAPYEKRIIELIKAGS 66
Query: 69 --EDKRALKAAKRKLSTHEGTKTK 90
+ K+A K A+++L TH K K
Sbjct: 67 AKDSKKATKIARKRLGTHRRAKVK 90
>sp|P47834|RL36_CANAX 60S ribosomal protein L36 OS=Candida albicans GN=RPL36 PE=3 SV=1
Length = 99
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 60/94 (63%)
Query: 6 LPNTDLFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELL 65
+ + + G+NKG T KE+ P+ + RKG +S+R F R++++EVAG PYE+ + EL+
Sbjct: 1 MAKSGIAAGVNKGRKTTAKEVAPKISYRKGASSQRTVFVRSIVKEVAGLAPYERRLIELI 60
Query: 66 KVDEDKRALKAAKRKLSTHEGTKTKCEEMSNASA 99
+ +KRA K AK++L TH+ K EEM+ A
Sbjct: 61 RNAGEKRAKKLAKKRLGTHKRALRKVEEMTQVIA 94
>sp|P32790|SLA1_YEAST Actin cytoskeleton-regulatory complex protein SLA1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SLA1 PE=1
SV=1
Length = 1244
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 55 TPYEKTITELLKVDEDKRAL----KAAKRKLSTHEGTKTKCEEMSN 96
TP+E +I +L+ D +K+ + R L H G T CEE+ N
Sbjct: 286 TPHEWSIDKLVSYDNEKKHMFLEFVDPYRSLELHTGNTTTCEEIMN 331
>sp|A6ZKU1|SLA1_YEAS7 Actin cytoskeleton-regulatory complex protein SLA1 OS=Saccharomyces
cerevisiae (strain YJM789) GN=SLA1 PE=3 SV=1
Length = 1244
Score = 29.6 bits (65), Expect = 6.5, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 55 TPYEKTITELLKVDEDKRAL----KAAKRKLSTHEGTKTKCEEMSN 96
TP+E +I +L+ D +K+ + R L H G T CEE+ N
Sbjct: 286 TPHEWSIDKLVSYDNEKKHMFLEFVDPYRSLELHTGNTTTCEEIMN 331
>sp|O58778|AOR_PYRHO Tungsten-containing aldehyde ferredoxin oxidoreductase
OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428
/ JCM 9974 / NBRC 100139 / OT-3) GN=aor PE=3 SV=1
Length = 607
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 14 GLNKGHVVTKKELLPRPANRKGKT 37
G NKGHVV KE+LPR +G T
Sbjct: 565 GPNKGHVVRLKEMLPRYYKLRGWT 588
>sp|Q9V035|AOR_PYRAB Tungsten-containing aldehyde ferredoxin oxidoreductase
OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=aor PE=3
SV=1
Length = 607
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 14 GLNKGHVVTKKELLPRPANRKGKT 37
G NKGHVV KE+LPR +G T
Sbjct: 565 GPNKGHVVRLKEMLPRYYKLRGWT 588
>sp|Q5JE15|AOR_PYRKO Tungsten-containing aldehyde ferredoxin oxidoreductase
OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM
12380 / KOD1) GN=aor PE=3 SV=1
Length = 605
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 14 GLNKGHVVTKKELLPRPANRKGKT 37
G NKGHVV KE+LPR +G T
Sbjct: 563 GPNKGHVVRLKEMLPRYYKLRGWT 586
>sp|A7HNQ1|RLMN_FERNB Probable dual-specificity RNA methyltransferase RlmN
OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM
5306 / Rt17-B1) GN=rlmN PE=3 SV=1
Length = 348
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 3 APKLPNTDLFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTIT 62
AP D+ V +NK + V +E++ + T RV FE +IRE F + +
Sbjct: 217 APNNYKRDIIVPMNKKYSV--EEIIQSAKEYQKITKNRVTFEYILIREFNDFVDDAEKLA 274
Query: 63 ELLK 66
ELLK
Sbjct: 275 ELLK 278
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,641,521
Number of Sequences: 539616
Number of extensions: 1283790
Number of successful extensions: 2830
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2790
Number of HSP's gapped (non-prelim): 51
length of query: 100
length of database: 191,569,459
effective HSP length: 69
effective length of query: 31
effective length of database: 154,335,955
effective search space: 4784414605
effective search space used: 4784414605
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)