BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 041686
         (325 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9LMP1|WAK2_ARATH Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2
           PE=1 SV=1
          Length = 732

 Score = 35.0 bits (79), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 4/86 (4%)

Query: 219 CAYPFAVPQYMPGLKAVSVIAHEIAELATNPLVNAWYAGPDPVAPVEIADLCEG---IYG 275
           C Y F V   M    A+  + + +  + T P+V  W  G      VE   +C G    + 
Sbjct: 193 CTYAFLVEDGMFDFHALEDL-NNLRNVTTFPVVLDWSIGDKTCKQVEYRGVCGGNSTCFD 251

Query: 276 TGGGGSYTGQLLDGEDGATYNMNGIR 301
           + GG  Y  + L+G +G  Y  NG +
Sbjct: 252 STGGTGYNCKCLEGFEGNPYLPNGCQ 277


>sp|Q29FF7|MED14_DROPS Mediator of RNA polymerase II transcription subunit 14
           OS=Drosophila pseudoobscura pseudoobscura GN=MED14 PE=3
           SV=2
          Length = 1546

 Score = 32.7 bits (73), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 1/79 (1%)

Query: 48  GSSEFVHMKYHMGPVLTANITVHPIWYGTWLKSQKRI-IREFINSISAVESKHPSVAGWW 106
           GSS F  ++ H+   L   +    +   T   SQ RI + EF+   + ++S HP   G  
Sbjct: 716 GSSAFPRIEPHVWDDLMRRVLSISVRSQTNKNSQVRIWVVEFVFYSTPLQSCHPKEQGSR 775

Query: 107 KTVQLYTDQTGANISRTVR 125
           +TV L  +Q   + S+TV 
Sbjct: 776 RTVYLTYEQANHDFSKTVE 794


>sp|Q0JKD0|GLT1_ORYSJ Glutamate synthase 1 [NADH], chloroplastic OS=Oryza sativa subsp.
           japonica GN=Os01g0681900 PE=2 SV=1
          Length = 2167

 Score = 32.3 bits (72), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 69  VHPIWYGTWLKSQKRIIREFINSISAVESKHPSVAGWWKTVQLYTDQTGAN 119
            HP  YG WLK QK  +++ + S+   E   P ++G         +  G N
Sbjct: 521 AHP--YGEWLKRQKIYLKDIVESVPETERVAPGISGSLTQKNEKKEHAGVN 569


>sp|Q9LV03|GLUT1_ARATH Glutamate synthase 1 [NADH], chloroplastic OS=Arabidopsis thaliana
           GN=GLT1 PE=1 SV=2
          Length = 2208

 Score = 32.0 bits (71), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 13/31 (41%), Positives = 19/31 (61%)

Query: 74  YGTWLKSQKRIIREFINSISAVESKHPSVAG 104
           YG WLK QK  +++ I S+   E   PS++G
Sbjct: 541 YGEWLKRQKIELKDIIESVPEAERIAPSISG 571


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.136    0.439 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,048,590
Number of Sequences: 539616
Number of extensions: 5505685
Number of successful extensions: 11886
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 11885
Number of HSP's gapped (non-prelim): 4
length of query: 325
length of database: 191,569,459
effective HSP length: 118
effective length of query: 207
effective length of database: 127,894,771
effective search space: 26474217597
effective search space used: 26474217597
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)