Query 041686
Match_columns 325
No_of_seqs 131 out of 180
Neff 4.2
Searched_HMMs 46136
Date Fri Mar 29 09:37:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041686.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041686hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF04674 Phi_1: Phosphate-indu 100.0 2E-117 4E-122 834.0 23.4 256 55-320 1-272 (273)
2 TIGR01432 QOXA cytochrome aa3 54.6 6.9 0.00015 36.2 1.5 16 161-178 134-149 (217)
3 MTH00139 COX2 cytochrome c oxi 46.7 12 0.00025 35.0 1.7 17 161-179 144-160 (226)
4 COG3560 FMR2 Predicted oxidore 44.5 29 0.00062 32.5 3.8 41 134-176 16-58 (200)
5 TIGR01433 CyoA cytochrome o ub 40.7 14 0.00031 34.6 1.3 17 161-179 143-159 (226)
6 TIGR02866 CoxB cytochrome c ox 39.5 16 0.00034 33.3 1.4 22 161-185 121-142 (201)
7 MTH00038 COX2 cytochrome c oxi 38.7 18 0.00038 34.0 1.6 17 161-179 144-160 (229)
8 MTH00023 COX2 cytochrome c oxi 36.8 21 0.00045 33.8 1.7 17 161-179 155-171 (240)
9 MTH00168 COX2 cytochrome c oxi 36.4 21 0.00045 33.4 1.7 17 161-179 144-160 (225)
10 MTH00154 COX2 cytochrome c oxi 33.6 23 0.00049 33.3 1.4 16 161-178 144-159 (227)
11 MTH00047 COX2 cytochrome c oxi 33.0 24 0.00052 32.5 1.5 17 161-179 120-136 (194)
12 MTH00140 COX2 cytochrome c oxi 32.3 26 0.00057 32.7 1.6 17 161-179 144-160 (228)
13 MTH00117 COX2 cytochrome c oxi 31.8 26 0.00057 32.9 1.5 17 161-179 144-160 (227)
14 PF11305 DUF3107: Protein of u 30.8 1.3E+02 0.0028 24.2 5.0 18 139-156 18-35 (74)
15 MTH00027 COX2 cytochrome c oxi 30.3 31 0.00066 33.4 1.7 17 161-179 178-194 (262)
16 MTH00080 COX2 cytochrome c oxi 29.8 30 0.00064 32.8 1.5 17 161-179 147-163 (231)
17 MTH00051 COX2 cytochrome c oxi 28.7 29 0.00063 32.7 1.3 17 161-179 148-164 (234)
18 MTH00185 COX2 cytochrome c oxi 28.3 34 0.00074 32.3 1.6 17 161-179 144-160 (230)
19 MTH00008 COX2 cytochrome c oxi 27.6 35 0.00075 32.1 1.6 17 161-179 144-160 (228)
20 MTH00098 COX2 cytochrome c oxi 26.2 44 0.00094 31.5 1.9 17 161-179 144-160 (227)
21 MTH00129 COX2 cytochrome c oxi 25.5 39 0.00084 31.8 1.5 17 161-179 144-160 (230)
22 PF15232 DUF4585: Domain of un 25.4 66 0.0014 26.0 2.5 38 279-317 3-41 (75)
23 MTH00076 COX2 cytochrome c oxi 25.1 41 0.00088 31.6 1.5 17 161-179 144-160 (228)
No 1
>PF04674 Phi_1: Phosphate-induced protein 1 conserved region; InterPro: IPR006766 This entry represents a family of conserved plant proteins. A conserved region in these proteins was identified in a phosphate-induced protein of unknown function [].
Probab=100.00 E-value=2e-117 Score=834.00 Aligned_cols=256 Identities=49% Similarity=0.889 Sum_probs=246.4
Q ss_pred eeecCCceecccceEEEEEeecCCchhHHHHHHHHHhcCCCC-CCCCcHhHHHHHHHHhhhccCCcceeeEEeccEEeCC
Q 041686 55 MKYHMGPVLTANITVHPIWYGTWLKSQKRIIREFINSISAVE-SKHPSVAGWWKTVQLYTDQTGANISRTVRLGQEKNDR 133 (325)
Q Consensus 55 L~YH~GpvLtg~i~V~lIWYG~ftp~QksiI~DFl~Sls~~~-~~~PsVs~WW~t~~~Y~~~~g~~vs~~v~l~~qv~D~ 133 (325)
|+|||||||+|+|+|||||||+|+|+||+||+|||+||++++ +++|||++||+|+++|+++++++++.+|+|++|+.|+
T Consensus 1 L~YH~GplLtg~i~V~lIWYG~ftp~QkaiI~DFl~SLs~~~~~~~PSVa~WW~t~~~Y~~~~~~~~~~~v~l~~qv~D~ 80 (273)
T PF04674_consen 1 LTYHGGPLLTGNINVYLIWYGRFTPAQKAIIRDFLRSLSSSAPAPSPSVAQWWKTTEKYYDQAGANVSGRVVLGGQVSDE 80 (273)
T ss_pred CCCCCCceeecCeeEEEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCChhhhhhhHHhhcccccccccceEEEeeEEecC
Confidence 799999999999999999999999999999999999999876 6899999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhhccCCCCCCCCCCceEEEeccCCccccccccccccCccccCcccCcceeeEEEecCCCC
Q 041686 134 FYSHGKSLTRLSVQSVIKSHVTARSKPLPINPKGGLYLLLTSTDVYVQDFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAK 213 (325)
Q Consensus 134 ~ySlGksLt~~~i~~lv~~ai~~~~g~lP~~~~~giylVLTa~DV~V~gFC~s~CG~H~~~~~s~~~~~~~YawVGNs~~ 213 (325)
+|||||+||++||++||++++. ++|||||||||+||.||||||++||+|++++++.++.+++|+|||||++
T Consensus 81 ~ySlGksL~~~~i~~lv~~~~~---------~~~gvylVLTa~DV~v~gFC~~~CG~H~~~~~~~~~~~~~YawVGns~~ 151 (273)
T PF04674_consen 81 NYSLGKSLSRSQIQQLVAKAIP---------DPNGVYLVLTAADVAVEGFCMSRCGFHGSTFPSSVGKRLPYAWVGNSET 151 (273)
T ss_pred CCCCCcccCHHHHHHHHHhcCC---------CCCceEEEEecccceecccccccccCCcCCcccccccceeEEEecCccC
Confidence 9999999999999999999862 4599999999999999999999999999998888888999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCchH-------------HHHHHHHHHHhhcCccccccccCCCCCCCccccccCcccccCCCCC
Q 041686 214 LCPGVCAYPFAVPQYMPGLKA-------------VSVIAHEIAELATNPLVNAWYAGPDPVAPVEIADLCEGIYGTGGGG 280 (325)
Q Consensus 214 qCPg~CAwPF~~P~ygP~~~p-------------vi~iA~~LAgavTNPf~ngwyqG~~~~aplEaadaC~giyG~Gayp 280 (325)
||||+||||||+|.||||.+| ||||||||||++||||+||||||+ ++||+||+|+|+||||+||||
T Consensus 152 qCPg~CAwPf~~p~ygp~~~~l~~PNgDvGvDGMvi~iA~~LA~~~TNP~~~g~yqg~-~~aplEaa~aC~giyG~Gayp 230 (273)
T PF04674_consen 152 QCPGQCAWPFHQPIYGPQGPPLVPPNGDVGVDGMVINIAHELAGAVTNPFGNGYYQGD-ATAPLEAADACAGIYGSGAYP 230 (273)
T ss_pred CCCCCCCCCCcccccCCCCCCccCCCCCcchhhHHHHHHHHHHHhhcCccccccccCC-CCCccchhhhccccccCCCCC
Confidence 999999999999999999655 999999999999999999999985 799999999999999999999
Q ss_pred CCccceeeC-CCCcccccCCCC-ceeeeeccccCCCCCccCC
Q 041686 281 SYTGQLLDG-EDGATYNMNGIR-RRFLVQWVWNHVVNYCTGP 320 (325)
Q Consensus 281 GY~G~llvD-~~GASYNa~G~~-RkfLlpa~WdP~t~sC~~p 320 (325)
||+|+|++| .+|||||++|+| |||||||||||+|++|+|+
T Consensus 231 gy~G~l~vD~~tGaSyN~~G~~gRkfLlpa~wdP~t~~C~t~ 272 (273)
T PF04674_consen 231 GYPGQLLVDPATGASYNANGVNGRKFLLPALWDPETSSCSTL 272 (273)
T ss_pred CCCcceeecCCCCceeeccccCCceEEeecccCCCcCccccc
Confidence 999999999 579999999999 9999999999999999987
No 2
>TIGR01432 QOXA cytochrome aa3 quinol oxidase, subunit II. This enzyme catalyzes the oxidation of quinol with the concomitant reduction of molecular oxygen to water. This acts as the terminal electron acceptor in the respiratory chain. This subunit contains two transmembrane helices and a large external domain responsible for the binding and oxidation of quinol. QuoX is (presently) only found in gram positive bacteria of the Bacillus/Staphylococcus group. Like CyoA, the ubiquinol oxidase found in proteobacteria, the residues responsible for the ligation of Cu(a) and cytochrome c (found in the related cyt. c oxidases) are absent. Unlike CyoA, QoxA is in complex with a subunit I which contains cytochromes a similar to the cyt. c oxidases (as opposed to cytochromes b).
Probab=54.57 E-value=6.9 Score=36.19 Aligned_cols=16 Identities=25% Similarity=0.441 Sum_probs=12.4
Q ss_pred CCCCCCCceEEEeccCCc
Q 041686 161 LPINPKGGLYLLLTSTDV 178 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV 178 (325)
+|.+ .-|.+.|||+||
T Consensus 134 iP~g--~~v~~~ltS~DV 149 (217)
T TIGR01432 134 IPKD--RPVLFKLQSADT 149 (217)
T ss_pred EECC--CEEEEEEECCch
Confidence 4554 478889999998
No 3
>MTH00139 COX2 cytochrome c oxidase subunit II; Provisional
Probab=46.74 E-value=12 Score=35.04 Aligned_cols=17 Identities=35% Similarity=0.616 Sum_probs=13.2
Q ss_pred CCCCCCCceEEEeccCCcc
Q 041686 161 LPINPKGGLYLLLTSTDVY 179 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV~ 179 (325)
+|.+ .-+.+.+||.||-
T Consensus 144 lP~~--~~v~~~~tS~DVi 160 (226)
T MTH00139 144 LPYK--SNIRALITAADVL 160 (226)
T ss_pred EecC--CEEEEEEecCccc
Confidence 4554 4788999999984
No 4
>COG3560 FMR2 Predicted oxidoreductase related to nitroreductase [General function prediction only]
Probab=44.48 E-value=29 Score=32.55 Aligned_cols=41 Identities=15% Similarity=0.273 Sum_probs=29.1
Q ss_pred CCCCCCCCC--hhhHHHHHHHhhhccCCCCCCCCCCceEEEeccC
Q 041686 134 FYSHGKSLT--RLSVQSVIKSHVTARSKPLPINPKGGLYLLLTST 176 (325)
Q Consensus 134 ~ySlGksLt--~~~i~~lv~~ai~~~~g~lP~~~~~giylVLTa~ 176 (325)
-|+|||+|. +++|+++|+.+++..+..|-.. .+-.|||+.+
T Consensus 16 iYaL~k~lp~~~e~i~~~v~~avk~tPsaFNSQ--ssR~ViL~gd 58 (200)
T COG3560 16 IYALKKNLPVSDEEIKEIVKEAVKHTPSAFNSQ--SSRVVILFGD 58 (200)
T ss_pred HhhcCCCCCCcHHHHHHHHHHHHhcCCcccccC--CceEEEEecc
Confidence 499999887 6789999999997655555443 3455566554
No 5
>TIGR01433 CyoA cytochrome o ubiquinol oxidase subunit II. This enzyme catalyzes the oxidation of ubiquinol with the concomitant reduction of molecular oxygen to water. This acts as the terminal electron acceptor in the respiratory chain. Subunit II is responsible for binding and oxidation of the ubiquinone substrate. This sequence is closely related to QoxA, which oxidizes quinol in gram positive bacteria but which is in complex with subunits which utilize cytochromes a in the reduction of molecular oxygen. Slightly more distantly related is subunit II of cytochrome c oxidase which uses cyt. c as the oxidant.
Probab=40.65 E-value=14 Score=34.63 Aligned_cols=17 Identities=29% Similarity=0.526 Sum_probs=13.2
Q ss_pred CCCCCCCceEEEeccCCcc
Q 041686 161 LPINPKGGLYLLLTSTDVY 179 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV~ 179 (325)
+|.+ .-|.+.|||.||-
T Consensus 143 lP~g--~pV~~~ltS~DVi 159 (226)
T TIGR01433 143 FPVN--TPINFKITSNSVM 159 (226)
T ss_pred EECC--CEEEEEEEECchh
Confidence 5665 4788999999985
No 6
>TIGR02866 CoxB cytochrome c oxidase, subunit II. Cytochrome c oxidase is the terminal electron acceptor of mitochondria (and one of several possible acceptors in prokaryotes) in the electron transport chain of aerobic respiration. The enzyme couples the oxidation of reduced cytochrome c with the reduction of molecular oxygen to water. This process results in the pumping of four protons across the membrane which are used in the proton gradient powered synthesis of ATP. The oxidase contains two heme a cofactors and three copper atoms as well as other bound ions.
Probab=39.55 E-value=16 Score=33.27 Aligned_cols=22 Identities=32% Similarity=0.412 Sum_probs=15.7
Q ss_pred CCCCCCCceEEEeccCCcccccccc
Q 041686 161 LPINPKGGLYLLLTSTDVYVQDFCG 185 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV~V~gFC~ 185 (325)
+|.+ .-|.+.|||.||. .+|..
T Consensus 121 vp~g--~~v~~~~ts~DV~-Hsf~i 142 (201)
T TIGR02866 121 VPAG--TPVRLQVTSKDVI-HSFWV 142 (201)
T ss_pred EEcC--CEEEEEEEeCchh-hcccc
Confidence 4544 5799999999985 55554
No 7
>MTH00038 COX2 cytochrome c oxidase subunit II; Provisional
Probab=38.75 E-value=18 Score=34.02 Aligned_cols=17 Identities=35% Similarity=0.587 Sum_probs=13.2
Q ss_pred CCCCCCCceEEEeccCCcc
Q 041686 161 LPINPKGGLYLLLTSTDVY 179 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV~ 179 (325)
+|.+ .-+.+++||.||-
T Consensus 144 lP~~--~~v~~~~tS~DVi 160 (229)
T MTH00038 144 LPYQ--TPIRVLVSSADVL 160 (229)
T ss_pred EecC--eEEEEEEEECCcc
Confidence 4554 4788999999985
No 8
>MTH00023 COX2 cytochrome c oxidase subunit II; Validated
Probab=36.79 E-value=21 Score=33.84 Aligned_cols=17 Identities=41% Similarity=0.684 Sum_probs=13.2
Q ss_pred CCCCCCCceEEEeccCCcc
Q 041686 161 LPINPKGGLYLLLTSTDVY 179 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV~ 179 (325)
+|.+ .-|.+++||.||-
T Consensus 155 lP~~--~~v~~~~tS~DVi 171 (240)
T MTH00023 155 VPIN--THVRILVTGADVL 171 (240)
T ss_pred EecC--CEEEEEEEcCCcc
Confidence 4554 4789999999984
No 9
>MTH00168 COX2 cytochrome c oxidase subunit II; Provisional
Probab=36.43 E-value=21 Score=33.42 Aligned_cols=17 Identities=41% Similarity=0.737 Sum_probs=12.9
Q ss_pred CCCCCCCceEEEeccCCcc
Q 041686 161 LPINPKGGLYLLLTSTDVY 179 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV~ 179 (325)
+|.+ .-+.+++||.||-
T Consensus 144 lP~~--~~v~~~~tS~DVi 160 (225)
T MTH00168 144 LPMD--SKIRVLVTSADVL 160 (225)
T ss_pred EecC--CEEEEEEEeCChh
Confidence 4554 4788999999993
No 10
>MTH00154 COX2 cytochrome c oxidase subunit II; Provisional
Probab=33.59 E-value=23 Score=33.33 Aligned_cols=16 Identities=44% Similarity=0.806 Sum_probs=12.7
Q ss_pred CCCCCCCceEEEeccCCc
Q 041686 161 LPINPKGGLYLLLTSTDV 178 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV 178 (325)
+|.+ .-+-+.+||+||
T Consensus 144 lP~~--~~v~~~~tS~DV 159 (227)
T MTH00154 144 LPMN--TQIRILITAADV 159 (227)
T ss_pred EecC--CEEEEEEEcCch
Confidence 4554 478899999999
No 11
>MTH00047 COX2 cytochrome c oxidase subunit II; Provisional
Probab=32.97 E-value=24 Score=32.54 Aligned_cols=17 Identities=41% Similarity=0.358 Sum_probs=12.3
Q ss_pred CCCCCCCceEEEeccCCcc
Q 041686 161 LPINPKGGLYLLLTSTDVY 179 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV~ 179 (325)
+|.+ .-+.+.|||.||.
T Consensus 120 lp~g--~~v~~~ltS~DVi 136 (194)
T MTH00047 120 LVYG--VPYHLLVTSSDVI 136 (194)
T ss_pred EeCC--CEEEeeeecCccc
Confidence 3444 4688899999984
No 12
>MTH00140 COX2 cytochrome c oxidase subunit II; Provisional
Probab=32.31 E-value=26 Score=32.74 Aligned_cols=17 Identities=41% Similarity=0.507 Sum_probs=13.4
Q ss_pred CCCCCCCceEEEeccCCcc
Q 041686 161 LPINPKGGLYLLLTSTDVY 179 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV~ 179 (325)
+|.+ .-+.+.+||+||.
T Consensus 144 lP~~--~~v~~~~ts~DVi 160 (228)
T MTH00140 144 LPYS--VDTRVLVTSADVI 160 (228)
T ss_pred EeeC--cEEEEEEEcCccc
Confidence 4554 4788999999997
No 13
>MTH00117 COX2 cytochrome c oxidase subunit II; Provisional
Probab=31.76 E-value=26 Score=32.86 Aligned_cols=17 Identities=29% Similarity=0.682 Sum_probs=13.6
Q ss_pred CCCCCCCceEEEeccCCcc
Q 041686 161 LPINPKGGLYLLLTSTDVY 179 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV~ 179 (325)
+|.+ .-+-+.+||+||-
T Consensus 144 lP~~--~~v~~~~tS~DVi 160 (227)
T MTH00117 144 IPME--SPIRILITAEDVL 160 (227)
T ss_pred EecC--ceEEEEEEecchh
Confidence 4554 4788999999997
No 14
>PF11305 DUF3107: Protein of unknown function (DUF3107); InterPro: IPR021456 Some members in this family of proteins are annotated as ATP-binding proteins however this cannot be confirmed. Currently no function is known.
Probab=30.75 E-value=1.3e+02 Score=24.22 Aligned_cols=18 Identities=6% Similarity=0.139 Sum_probs=15.0
Q ss_pred CCCChhhHHHHHHHhhhc
Q 041686 139 KSLTRLSVQSVIKSHVTA 156 (325)
Q Consensus 139 ksLt~~~i~~lv~~ai~~ 156 (325)
-..+.+++++.|..|++.
T Consensus 18 s~~s~dev~~~v~~Al~~ 35 (74)
T PF11305_consen 18 SDQSADEVEAAVTDALAD 35 (74)
T ss_pred cCCCHHHHHHHHHHHHhC
Confidence 446889999999999964
No 15
>MTH00027 COX2 cytochrome c oxidase subunit II; Provisional
Probab=30.33 E-value=31 Score=33.38 Aligned_cols=17 Identities=35% Similarity=0.727 Sum_probs=13.1
Q ss_pred CCCCCCCceEEEeccCCcc
Q 041686 161 LPINPKGGLYLLLTSTDVY 179 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV~ 179 (325)
+|.+ .-+-+++||+||-
T Consensus 178 lP~~--~~v~~~ltS~DVi 194 (262)
T MTH00027 178 LPVD--TNVRVLITAADVL 194 (262)
T ss_pred EeeC--cEEEEEEEcCccc
Confidence 4554 4788999999984
No 16
>MTH00080 COX2 cytochrome c oxidase subunit II; Provisional
Probab=29.78 E-value=30 Score=32.80 Aligned_cols=17 Identities=35% Similarity=0.587 Sum_probs=13.2
Q ss_pred CCCCCCCceEEEeccCCcc
Q 041686 161 LPINPKGGLYLLLTSTDVY 179 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV~ 179 (325)
+|.+ .-+-+.+||+||-
T Consensus 147 lP~~--~~v~~~itS~DVi 163 (231)
T MTH00080 147 LPCD--TNIRFCITSSDVI 163 (231)
T ss_pred eecC--cEEEEEEEeCccc
Confidence 5554 4789999999993
No 17
>MTH00051 COX2 cytochrome c oxidase subunit II; Provisional
Probab=28.74 E-value=29 Score=32.73 Aligned_cols=17 Identities=35% Similarity=0.626 Sum_probs=13.4
Q ss_pred CCCCCCCceEEEeccCCcc
Q 041686 161 LPINPKGGLYLLLTSTDVY 179 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV~ 179 (325)
+|.+ .-+.+.+||.||.
T Consensus 148 lP~~--~~v~~~itS~DVi 164 (234)
T MTH00051 148 VPIQ--TQVRVLVTAADVL 164 (234)
T ss_pred EecC--cEEEEEEEeCchh
Confidence 4554 4788999999997
No 18
>MTH00185 COX2 cytochrome c oxidase subunit II; Provisional
Probab=28.27 E-value=34 Score=32.25 Aligned_cols=17 Identities=29% Similarity=0.643 Sum_probs=13.3
Q ss_pred CCCCCCCceEEEeccCCcc
Q 041686 161 LPINPKGGLYLLLTSTDVY 179 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV~ 179 (325)
+|.+ .-+-+++||+||.
T Consensus 144 lP~~--~~v~~~~tS~DVi 160 (230)
T MTH00185 144 VPME--SPIRVLITAEDVL 160 (230)
T ss_pred EecC--CEEEEEEEcCccc
Confidence 4554 4688999999997
No 19
>MTH00008 COX2 cytochrome c oxidase subunit II; Validated
Probab=27.64 E-value=35 Score=32.11 Aligned_cols=17 Identities=35% Similarity=0.649 Sum_probs=13.6
Q ss_pred CCCCCCCceEEEeccCCcc
Q 041686 161 LPINPKGGLYLLLTSTDVY 179 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV~ 179 (325)
+|.+ .-+.+.+||+||.
T Consensus 144 lP~~--~~v~~~~tS~DVi 160 (228)
T MTH00008 144 LPMQ--TEIRVLVTAADVI 160 (228)
T ss_pred EecC--CEEEEEEEeCCcc
Confidence 4554 4789999999997
No 20
>MTH00098 COX2 cytochrome c oxidase subunit II; Validated
Probab=26.20 E-value=44 Score=31.48 Aligned_cols=17 Identities=35% Similarity=0.632 Sum_probs=13.9
Q ss_pred CCCCCCCceEEEeccCCcc
Q 041686 161 LPINPKGGLYLLLTSTDVY 179 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV~ 179 (325)
+|.+ .-+.+.+||+||.
T Consensus 144 lP~~--~~v~~~~tS~DVi 160 (227)
T MTH00098 144 LPME--MPIRMLISSEDVL 160 (227)
T ss_pred ecCC--CEEEEEEEECccc
Confidence 5665 4799999999997
No 21
>MTH00129 COX2 cytochrome c oxidase subunit II; Provisional
Probab=25.52 E-value=39 Score=31.85 Aligned_cols=17 Identities=24% Similarity=0.616 Sum_probs=13.8
Q ss_pred CCCCCCCceEEEeccCCcc
Q 041686 161 LPINPKGGLYLLLTSTDVY 179 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV~ 179 (325)
+|.+ .-+-+.+||+||.
T Consensus 144 lP~~--~~v~~~~tS~DVi 160 (230)
T MTH00129 144 VPVE--SPIRVLVSAEDVL 160 (230)
T ss_pred EecC--cEEEEEEEeCccc
Confidence 5665 4789999999997
No 22
>PF15232 DUF4585: Domain of unknown function (DUF4585)
Probab=25.45 E-value=66 Score=26.05 Aligned_cols=38 Identities=8% Similarity=0.075 Sum_probs=24.4
Q ss_pred CCCCccceeeCCC-CcccccCCCCceeeeeccccCCCCCc
Q 041686 279 GGSYTGQLLDGED-GATYNMNGIRRRFLVQWVWNHVVNYC 317 (325)
Q Consensus 279 ypGY~G~llvD~~-GASYNa~G~~RkfLlpa~WdP~t~sC 317 (325)
|+.-.++||+|.+ | .|=..-.-|.=.+-.++||+|.+-
T Consensus 3 ~~~tqrKvL~DP~SG-~Yy~vd~P~Qp~~k~lfDPETGqY 41 (75)
T PF15232_consen 3 YPATQRKVLQDPESG-QYYVVDAPVQPKTKTLFDPETGQY 41 (75)
T ss_pred CCccCccEeecCCCC-CEEEEecCCCcceeeeecCCCCcE
Confidence 4556789999975 6 343433334434556789998764
No 23
>MTH00076 COX2 cytochrome c oxidase subunit II; Provisional
Probab=25.08 E-value=41 Score=31.65 Aligned_cols=17 Identities=29% Similarity=0.663 Sum_probs=13.5
Q ss_pred CCCCCCCceEEEeccCCcc
Q 041686 161 LPINPKGGLYLLLTSTDVY 179 (325)
Q Consensus 161 lP~~~~~giylVLTa~DV~ 179 (325)
+|.+ .-+.+.+||.||.
T Consensus 144 lP~~--~~v~~~~tS~DVi 160 (228)
T MTH00076 144 VPME--SPIRMLITAEDVL 160 (228)
T ss_pred EecC--CEEEEEEEecccc
Confidence 4554 4788999999997
Done!