BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041689
(652 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 124/227 (54%), Gaps = 10/227 (4%)
Query: 413 RRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFK-SFDIE 471
+RFS E+ A+ F+ N++G+GGFG +YK R+ DG VAVK + + + F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLY---SSNCILDIFQRLNIM 528
E++ +RNL+++ C + LV +M +GS+ CL S LD +R I
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 529 IDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTL 588
+ A L YLH + +IH D+K +N+LLD+ A + DFG+ KL+ +D +
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VR 204
Query: 589 ATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVSFVFNLA 635
TIG+IAPEY G+ DV+ +G+ML+E+ + ++ F+LA
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR-----AFDLA 246
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 122/227 (53%), Gaps = 10/227 (4%)
Query: 413 RRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFK-SFDIE 471
+RFS E+ A+ F N++G+GGFG +YK R+ DG VAVK + + + F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLY---SSNCILDIFQRLNIM 528
E++ +RNL+++ C + LV +M +GS+ CL S LD +R I
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 529 IDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTL 588
+ A L YLH + +IH D+K +N+LLD+ A + DFG+ KL+ +D +
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VR 196
Query: 589 ATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVSFVFNLA 635
IG+IAPEY G+ DV+ +G+ML+E+ + ++ F+LA
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR-----AFDLA 238
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 124/236 (52%), Gaps = 11/236 (4%)
Query: 414 RFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECE 473
R +++ AT F+ LIG G FG +YK + DG +VA+K + + + F+ E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 474 IMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSN---CILDIFQRLNIMID 530
+ + +LV +I C L+ ++M +G+L++ LY S+ + QRL I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
A L YLH +IH D+K N+LLD+ V ++DFGI+K DQ+ T
Sbjct: 148 AARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVSF----VFNLAMECTIES 642
+GYI PEY +GR+ DVYSFG++L E+ A+ V + NLA E +ES
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA-EWAVES 259
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 123/236 (52%), Gaps = 11/236 (4%)
Query: 414 RFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECE 473
R +++ AT F+ LIG G FG +YK + DG +VA+K + + + F+ E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 474 IMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSN---CILDIFQRLNIMID 530
+ + +LV +I C L+ ++M +G+L++ LY S+ + QRL I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
A L YLH +IH D+K N+LLD+ V ++DFGI+K Q+ T
Sbjct: 148 AARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVSF----VFNLAMECTIES 642
+GYI PEY +GR+ DVYSFG++L E+ A+ V + NLA E +ES
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA-EWAVES 259
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 116/224 (51%), Gaps = 23/224 (10%)
Query: 412 WRRFSYLEVCRATYGFNEN------NLIGKGGFGTIYKSRIGDGMEVAVK----VFHLQC 461
+ FS+ E+ T F+E N +G+GGFG +YK + + VAVK + +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 70
Query: 462 GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI--- 518
+ FD E ++M + NLV+++ S+ + LV +MP+GSL L +C+
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL---LDRLSCLDGT 127
Query: 519 --LDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576
L R I A+ + +LH N IH D+K +N+LLD+ A +SDFG+ +
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 577 GEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
Q++ ++ + T Y+APE R G + D+YSFG++L+EI
Sbjct: 185 KFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEI 227
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 23/224 (10%)
Query: 412 WRRFSYLEVCRATYGFNEN------NLIGKGGFGTIYKSRIGDGMEVAVK----VFHLQC 461
+ FS+ E+ T F+E N +G+GGFG +YK + + VAVK + +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 70
Query: 462 GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI--- 518
+ FD E ++M + NLV+++ S+ + LV +MP+GSL L +C+
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL---LDRLSCLDGT 127
Query: 519 --LDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576
L R I A+ + +LH N IH D+K +N+LLD+ A +SDFG+ +
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 577 GEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
Q++ + + T Y+APE R G + D+YSFG++L+EI
Sbjct: 185 KFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEI 227
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 23/224 (10%)
Query: 412 WRRFSYLEVCRATYGFNEN------NLIGKGGFGTIYKSRIGDGMEVAVK----VFHLQC 461
+ FS+ E+ T F+E N +G+GGFG +YK + + VAVK + +
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 64
Query: 462 GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI--- 518
+ FD E ++M + NLV+++ S+ + LV +MP+GSL L +C+
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL---LDRLSCLDGT 121
Query: 519 --LDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576
L R I A+ + +LH N IH D+K +N+LLD+ A +SDFG+ +
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 178
Query: 577 GEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
Q + + + T Y+APE R G + D+YSFG++L+EI
Sbjct: 179 KFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEI 221
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 8/197 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFK--SFDIECEIMKSIHYRNLVKIISSC 490
IG G FGT++++ G +VAVK+ Q A + F E IMK + + N+V + +
Sbjct: 45 IGAGSFGTVHRAE-WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 491 SNEEFKELVLEHMPHGSLEKCLYSSNCI--LDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ +V E++ GSL + L+ S LD +RL++ DVA + YLH N P++H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
DLK N+L+D + DFG+++L + T ++APE R+
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKS 220
Query: 609 DVYSFGIMLMEIHSAKQ 625
DVYSFG++L E+ + +Q
Sbjct: 221 DVYSFGVILWELATLQQ 237
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 104/197 (52%), Gaps = 8/197 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFK--SFDIECEIMKSIHYRNLVKIISSC 490
IG G FGT++++ G +VAVK+ Q A + F E IMK + + N+V + +
Sbjct: 45 IGAGSFGTVHRAE-WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 491 SNEEFKELVLEHMPHGSLEKCLYSSNCI--LDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ +V E++ GSL + L+ S LD +RL++ DVA + YLH N P++H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
+LK N+L+D + DFG+++L ++ T ++APE R+
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKS 220
Query: 609 DVYSFGIMLMEIHSAKQ 625
DVYSFG++L E+ + +Q
Sbjct: 221 DVYSFGVILWELATLQQ 237
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 111/224 (49%), Gaps = 23/224 (10%)
Query: 412 WRRFSYLEVCRATYGFNEN------NLIGKGGFGTIYKSRIGDGMEVAVK----VFHLQC 461
+ FS+ E+ T F+E N G+GGFG +YK + + VAVK + +
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 61
Query: 462 GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI--- 518
+ FD E ++ + NLV+++ S+ + LV + P+GSL L +C+
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL---LDRLSCLDGT 118
Query: 519 --LDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576
L R I A+ + +LH N IH D+K +N+LLD+ A +SDFG+ +
Sbjct: 119 PPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 175
Query: 577 GEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
Q + ++ + T Y APE R G + D+YSFG++L+EI
Sbjct: 176 KFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEI 218
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 144/355 (40%), Gaps = 43/355 (12%)
Query: 46 PAAIFDVSTLKDLALQDNYLSG-------SLSSIADNYLTSSTPELSFLSSLSNCKSLVV 98
P + + S L L L NYLSG SLS + D L + E L K+L
Sbjct: 408 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 467
Query: 99 FLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNG 158
+L N L G +P + N ++ L +S ++G IP+ IG L NL + L N +G
Sbjct: 468 LILDFNDLTGEIPS-GLSNCTN-LNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSG 525
Query: 159 SIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLV-KLYKLDLGGNKL------------- 204
+IP L + + L ++ L N GTIP +F+ K+ + G +
Sbjct: 526 NIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECH 585
Query: 205 -SGSILTCFSNLASLRTLSLSYND----------GPLPLEIGNLKVLIGIDFSMNNFSSV 253
+G++L F + S + LS + G N ++ +D S N S
Sbjct: 586 GAGNLLE-FQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGY 644
Query: 254 IPTTIGSLKDLQYLFLGYNILKGSIPDSVGDXXXXXXXXXXXXXXXGAIPXXXXXXXXXX 313
IP IGS+ L L LG+N + GSIPD VGD G IP
Sbjct: 645 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 704
Query: 314 XXXXSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPCKTS-----IHH 363
S N L G IP+ G F F F N LCG P +P C S HH
Sbjct: 705 EIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP---LPRCDPSNADGYAHH 756
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 108/198 (54%), Gaps = 5/198 (2%)
Query: 89 SLSN-CKSLVVFLLSNNPLNG-ILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNL 146
SL+N SL+ LS+N +G ILP + N ++L+ + +G IP + N + L
Sbjct: 359 SLTNLSASLLTLDLSSNNFSGPILPNL-CQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL 417
Query: 147 TAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSG 206
+++L N L+G+IP +L L KL+ + L N LEG IP ++ + L L L N L+G
Sbjct: 418 VSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 477
Query: 207 SILTCFSNLASLRTLSLSYN--DGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDL 264
I + SN +L +SLS N G +P IG L+ L + S N+FS IP +G + L
Sbjct: 478 EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL 537
Query: 265 QYLFLGYNILKGSIPDSV 282
+L L N+ G+IP ++
Sbjct: 538 IWLDLNTNLFNGTIPAAM 555
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 123/286 (43%), Gaps = 28/286 (9%)
Query: 51 DVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNGIL 110
D S L+ L + N LSG F ++S C L + +S+N G +
Sbjct: 218 DCSALQHLDISGNKLSGD-----------------FSRAISTCTELKLLNISSNQFVGPI 260
Query: 111 PRMSIGNLSHSLEIFDMSKCNVSGGIPEEI-GNLTNLTAIYLGGNKLNGSIPFTLRELQK 169
P + + SL+ +++ +G IP+ + G LT + L GN G++P
Sbjct: 261 PPLPL----KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 316
Query: 170 LQYVGLKDNKLEGTIPYD-IFRLVKLYKLDLGGNKLSGSILTCFSNL-ASLRTLSLSYND 227
L+ + L N G +P D + ++ L LDL N+ SG + +NL ASL TL LS N+
Sbjct: 317 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNN 376
Query: 228 --GP-LPLEIGNLK-VLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVG 283
GP LP N K L + N F+ IP T+ + +L L L +N L G+IP S+G
Sbjct: 377 FSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLG 436
Query: 284 DXXXXXXXXXXXXXXXGAIPXXXXXXXXXXXXXXSFNKLEGEIPKG 329
G IP FN L GEIP G
Sbjct: 437 SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG 482
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 142/347 (40%), Gaps = 38/347 (10%)
Query: 46 PAAIFDVSTLKDLALQDNYLSG-------SLSSIADNYLTSSTPELSFLSSLSNCKSLVV 98
P + + S L L L NYLSG SLS + D L + E L K+L
Sbjct: 411 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 470
Query: 99 FLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNG 158
+L N L G +P + N ++ L +S ++G IP+ IG L NL + L N +G
Sbjct: 471 LILDFNDLTGEIPS-GLSNCTN-LNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSG 528
Query: 159 SIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLV-KLYKLDLGGNKL------------- 204
+IP L + + L ++ L N GTIP +F+ K+ + G +
Sbjct: 529 NIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECH 588
Query: 205 -SGSILTCFSNLASLRTLSLSYND----------GPLPLEIGNLKVLIGIDFSMNNFSSV 253
+G++L F + S + LS + G N ++ +D S N S
Sbjct: 589 GAGNLLE-FQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGY 647
Query: 254 IPTTIGSLKDLQYLFLGYNILKGSIPDSVGDXXXXXXXXXXXXXXXGAIPXXXXXXXXXX 313
IP IGS+ L L LG+N + GSIPD VGD G IP
Sbjct: 648 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707
Query: 314 XXXXSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPCKTS 360
S N L G IP+ G F F F N LCG P +P C S
Sbjct: 708 EIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP---LPRCDPS 751
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 108/198 (54%), Gaps = 5/198 (2%)
Query: 89 SLSN-CKSLVVFLLSNNPLNG-ILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNL 146
SL+N SL+ LS+N +G ILP + N ++L+ + +G IP + N + L
Sbjct: 362 SLTNLSASLLTLDLSSNNFSGPILPNL-CQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL 420
Query: 147 TAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSG 206
+++L N L+G+IP +L L KL+ + L N LEG IP ++ + L L L N L+G
Sbjct: 421 VSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 480
Query: 207 SILTCFSNLASLRTLSLSYN--DGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDL 264
I + SN +L +SLS N G +P IG L+ L + S N+FS IP +G + L
Sbjct: 481 EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL 540
Query: 265 QYLFLGYNILKGSIPDSV 282
+L L N+ G+IP ++
Sbjct: 541 IWLDLNTNLFNGTIPAAM 558
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 123/286 (43%), Gaps = 28/286 (9%)
Query: 51 DVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNGIL 110
D S L+ L + N LSG F ++S C L + +S+N G +
Sbjct: 221 DCSALQHLDISGNKLSGD-----------------FSRAISTCTELKLLNISSNQFVGPI 263
Query: 111 PRMSIGNLSHSLEIFDMSKCNVSGGIPEEI-GNLTNLTAIYLGGNKLNGSIPFTLRELQK 169
P + + SL+ +++ +G IP+ + G LT + L GN G++P
Sbjct: 264 PPLPL----KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319
Query: 170 LQYVGLKDNKLEGTIPYD-IFRLVKLYKLDLGGNKLSGSILTCFSNL-ASLRTLSLSYND 227
L+ + L N G +P D + ++ L LDL N+ SG + +NL ASL TL LS N+
Sbjct: 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNN 379
Query: 228 --GP-LPLEIGNLK-VLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVG 283
GP LP N K L + N F+ IP T+ + +L L L +N L G+IP S+G
Sbjct: 380 FSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLG 439
Query: 284 DXXXXXXXXXXXXXXXGAIPXXXXXXXXXXXXXXSFNKLEGEIPKG 329
G IP FN L GEIP G
Sbjct: 440 SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG 485
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 105/213 (49%), Gaps = 22/213 (10%)
Query: 419 EVCRATYGFNENNL-----IGKGGFGTIYKSRIGD--GMEVAVKVFHLQCGRAFKSFDIE 471
E R+ + N L IGKG FG + +GD G +VAVK ++ ++F E
Sbjct: 10 EFYRSGWALNMKELKLLQTIGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAE 64
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFK-ELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMI 529
+M + + NLV+++ E+ +V E+M GSL L S +L L +
Sbjct: 65 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 124
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA 589
DV +EYL N V H DL NVL+ + VA +SDFG+TK + S TQ
Sbjct: 125 DVCEAMEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKL 176
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ + APE RE + DV+SFGI+L EI+S
Sbjct: 177 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 105/213 (49%), Gaps = 22/213 (10%)
Query: 419 EVCRATYGFNENNL-----IGKGGFGTIYKSRIGD--GMEVAVKVFHLQCGRAFKSFDIE 471
E R+ + N L IGKG FG + +GD G +VAVK ++ ++F E
Sbjct: 182 EFYRSGWALNMKELKLLQTIGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAE 236
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFK-ELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMI 529
+M + + NLV+++ E+ +V E+M GSL L S +L L +
Sbjct: 237 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 296
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA 589
DV +EYL N V H DL NVL+ + VA +SDFG+TK + S TQ
Sbjct: 297 DVCEAMEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKL 348
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ + APE RE + DV+SFGI+L EI+S
Sbjct: 349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 100/230 (43%), Gaps = 8/230 (3%)
Query: 131 NVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFR 190
N+ G IP I LT L +Y+ ++G+IP L +++ L + N L GT+P I
Sbjct: 88 NLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147
Query: 191 LVKLYKLDLGGNKLSGSI---LTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSM 247
L L + GN++SG+I FS L + T+S + G +P NL + +D S
Sbjct: 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAF-VDLSR 206
Query: 248 NNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDXXXXXXXXXXXXXXXGAIPXXXX 307
N GS K+ Q + L N L + VG G +P
Sbjct: 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLT 265
Query: 308 XXXXXXXXXXSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPC 357
SFN L GEIP+GG+ F ++ NK LCGSP +P C
Sbjct: 266 QLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP---LPAC 312
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 99/194 (51%), Gaps = 17/194 (8%)
Query: 433 IGKGGFGTIYKSRIGD--GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSC 490
IGKG FG + +GD G +VAVK ++ ++F E +M + + NLV+++
Sbjct: 14 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 491 SNEEFK-ELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
E+ +V E+M GSL L S +L L +DV +EYL N V H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV---H 125
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
DL NVL+ + VA +SDFG+TK + S TQ + + APE RE +
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKS 180
Query: 609 DVYSFGIMLMEIHS 622
DV+SFGI+L EI+S
Sbjct: 181 DVWSFGILLWEIYS 194
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 98/194 (50%), Gaps = 17/194 (8%)
Query: 433 IGKGGFGTIYKSRIGD--GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSC 490
IGKG FG + +GD G +VAVK ++ ++F E +M + + NLV+++
Sbjct: 20 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 491 SNEEFK-ELVLEHMPHGSLEKCLYS-SNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
E+ +V E+M GSL L S +L L +DV +EYL N V H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV---H 131
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
DL NVL+ + VA +SDFG+TK + S TQ + + APE RE
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFSTKS 186
Query: 609 DVYSFGIMLMEIHS 622
DV+SFGI+L EI+S
Sbjct: 187 DVWSFGILLWEIYS 200
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 422 RATYGFNENNL-----IGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIE 471
R F E +L +GKG FG++ R G VAVK + F+ E
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 60
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMI 529
EI+KS+ + N+VK C + + +L++E++P+GSL L +D + L
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 120
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-- 587
+ +EYL IH DL N+L+++ + DFG+TK+L +D+ + +
Sbjct: 121 QICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPG 176
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE E + DV+SFG++L E+
Sbjct: 177 ESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 209
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 422 RATYGFNENNL-----IGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIE 471
R F E +L +GKG FG++ R G VAVK + F+ E
Sbjct: 6 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 65
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMI 529
EI+KS+ + N+VK C + + +L++E++P+GSL L +D + L
Sbjct: 66 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 125
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-- 587
+ +EYL IH DL N+L+++ + DFG+TK+L +D+ + +
Sbjct: 126 QICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPG 181
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE E + DV+SFG++L E+
Sbjct: 182 ESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 422 RATYGFNENNL-----IGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIE 471
R F E +L +GKG FG++ R G VAVK + F+ E
Sbjct: 33 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 92
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMI 529
EI+KS+ + N+VK C + + +L++E++P+GSL L +D + L
Sbjct: 93 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 152
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-- 587
+ +EYL IH DL N+L+++ + DFG+TK+L +D+ + +
Sbjct: 153 QICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPG 208
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE E + DV+SFG++L E+
Sbjct: 209 ESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 422 RATYGFNENNL-----IGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIE 471
R F E +L +GKG FG++ R G VAVK + F+ E
Sbjct: 2 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 61
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMI 529
EI+KS+ + N+VK C + + +L++E++P+GSL L +D + L
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-- 587
+ +EYL IH DL N+L+++ + DFG+TK+L +D+ + +
Sbjct: 122 QICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPG 177
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE E + DV+SFG++L E+
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 422 RATYGFNENNL-----IGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIE 471
R F E +L +GKG FG++ R G VAVK + F+ E
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMI 529
EI+KS+ + N+VK C + + +L++E++P+GSL L +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 124
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-- 587
+ +EYL IH DL N+L+++ + DFG+TK+L +D+ + +
Sbjct: 125 QICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPG 180
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE E + DV+SFG++L E+
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 422 RATYGFNENNL-----IGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIE 471
R F E +L +GKG FG++ R G VAVK + F+ E
Sbjct: 7 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 66
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMI 529
EI+KS+ + N+VK C + + +L++E++P+GSL L +D + L
Sbjct: 67 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 126
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-- 587
+ +EYL IH DL N+L+++ + DFG+TK+L +D+ + +
Sbjct: 127 QICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPG 182
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE E + DV+SFG++L E+
Sbjct: 183 ESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 422 RATYGFNENNL-----IGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIE 471
R F E +L +GKG FG++ R G VAVK + F+ E
Sbjct: 9 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 68
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMI 529
EI+KS+ + N+VK C + + +L++E++P+GSL L +D + L
Sbjct: 69 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 128
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-- 587
+ +EYL IH DL N+L+++ + DFG+TK+L +D+ + +
Sbjct: 129 QICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPG 184
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE E + DV+SFG++L E+
Sbjct: 185 ESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 13/197 (6%)
Query: 433 IGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKII 487
+GKG FG++ R G VAVK + F+ E EI+KS+ + N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 488 SSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
C + + +L++E++P+GSL L +D + L + +EYL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 134
Query: 546 VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT--LATIGYIAPEYGREGR 603
IH DL N+L+++ + DFG+TK+L +D+ + + + I + APE E +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESK 193
Query: 604 VFANGDVYSFGIMLMEI 620
DV+SFG++L E+
Sbjct: 194 FSVASDVWSFGVVLYEL 210
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 422 RATYGFNENNL-----IGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIE 471
R F E +L +GKG FG++ R G VAVK + F+ E
Sbjct: 8 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 67
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMI 529
EI+KS+ + N+VK C + + +L++E++P+GSL L +D + L
Sbjct: 68 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 127
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-- 587
+ +EYL IH DL N+L+++ + DFG+TK+L +D+ + +
Sbjct: 128 QICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPG 183
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE E + DV+SFG++L E+
Sbjct: 184 ESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 216
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 18/213 (8%)
Query: 422 RATYGFNENNL-----IGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIE 471
R F E +L +GKG FG++ R G VAVK + F+ E
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMI 529
EI+KS+ + N+VK C + + +L++E++P+GSL L + +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTS 124
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-- 587
+ +EYL IH DL N+L+++ + DFG+TK+L +D+ + +
Sbjct: 125 QICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPG 180
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE E + DV+SFG++L E+
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 18/208 (8%)
Query: 427 FNENNL-----IGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIECEIMK 476
F E +L +GKG FG++ R G VAVK + F+ E EI+K
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 64
Query: 477 SIHYRNLVKIISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV 534
S+ + N+VK C + + +L++E++P+GSL L +D + L +
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 124
Query: 535 LEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT--LATIG 592
+EYL IH DL N+L+++ + DFG+TK+L +D+ + + + I
Sbjct: 125 MEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIF 180
Query: 593 YIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ APE E + DV+SFG++L E+
Sbjct: 181 WYAPESLTESKFSVASDVWSFGVVLYEL 208
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 13/197 (6%)
Query: 433 IGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKII 487
+GKG FG++ R G VAVK + F+ E EI+KS+ + N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 488 SSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
C + + +L++E++P+GSL L +D + L + +EYL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 152
Query: 546 VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT--LATIGYIAPEYGREGR 603
IH DL N+L+++ + DFG+TK+L +D+ + + + I + APE E +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 604 VFANGDVYSFGIMLMEI 620
DV+SFG++L E+
Sbjct: 212 FSVASDVWSFGVVLYEL 228
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 13/197 (6%)
Query: 433 IGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKII 487
+GKG FG++ R G VAVK + F+ E EI+KS+ + N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 488 SSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
C + + +L++E++P+GSL L +D + L + +EYL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 152
Query: 546 VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT--LATIGYIAPEYGREGR 603
IH DL N+L+++ + DFG+TK+L +D+ + + + I + APE E +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 604 VFANGDVYSFGIMLMEI 620
DV+SFG++L E+
Sbjct: 212 FSVASDVWSFGVVLYEL 228
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 422 RATYGFNENNL-----IGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIE 471
R F E +L +GKG FG++ R G VAVK + F+ E
Sbjct: 5 RDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 64
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMI 529
EI+KS+ + N+VK C + + +L++E +P+GSL + L +D + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTS 124
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-- 587
+ +EYL IH DL N+L+++ + DFG+TK+L +D+ + +
Sbjct: 125 QICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPG 180
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE E + DV+SFG++L E+
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 13/197 (6%)
Query: 433 IGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKII 487
+GKG FG++ R G VAVK + F+ E EI+KS+ + N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 488 SSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
C + + +L++E++P+GSL L +D + L + +EYL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 134
Query: 546 VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT--LATIGYIAPEYGREGR 603
IH DL N+L+++ + DFG+TK+L +D+ + + + I + APE E +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEFFKVKEPGESPIFWYAPESLTESK 193
Query: 604 VFANGDVYSFGIMLMEI 620
DV+SFG++L E+
Sbjct: 194 FSVASDVWSFGVVLYEL 210
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQ----CGRAFKSFDIECEIMKSIHYRNLVKI 486
+IG GGFG +Y++ IGD EVAVK + ++ E ++ + + N++ +
Sbjct: 14 IIGIGGFGKVYRAFWIGD--EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 487 ISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPV 546
C E LV+E G L + L DI +N + +A + YLH +VP+
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHDEAIVPI 129
Query: 547 IHCDLKPSNVLLDDTM--------VAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
IH DLK SN+L+ + + ++DFG+ + E T+ ++APE
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAAGAYAWMAPEV 185
Query: 599 GREGRVFANGDVYSFGIMLMEI 620
R DV+S+G++L E+
Sbjct: 186 IRASMFSKGSDVWSYGVLLWEL 207
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 14/216 (6%)
Query: 408 PKATWRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKS 467
P+ W + EV R T E +G G FG ++ +VAVK Q + +
Sbjct: 8 PQKPWWEDEW-EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA 63
Query: 468 FDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLN 526
F E +MK + ++ LV++ + + E ++ E+M +GSL L + + I L I + L+
Sbjct: 64 FLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLD 122
Query: 527 IMIDVASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQT 585
+ +A + ++ N+ IH DL+ +N+L+ DT+ ++DFG+ +L+ ED T
Sbjct: 123 MAAQIAEGMAFIEERNY----IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAR 176
Query: 586 QTLA-TIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE G DV+SFGI+L EI
Sbjct: 177 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 212
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 14/216 (6%)
Query: 408 PKATWRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKS 467
P+ W + EV R T E +G G FG ++ +VAVK Q + +
Sbjct: 7 PQKPWWEDEW-EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA 62
Query: 468 FDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLN 526
F E +MK + ++ LV++ + + E ++ E+M +GSL L + + I L I + L+
Sbjct: 63 FLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLD 121
Query: 527 IMIDVASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQT 585
+ +A + ++ N+ IH DL+ +N+L+ DT+ ++DFG+ +L+ ED T
Sbjct: 122 MAAQIAEGMAFIEERNY----IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAR 175
Query: 586 QTLA-TIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE G DV+SFGI+L EI
Sbjct: 176 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 211
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 14/216 (6%)
Query: 408 PKATWRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKS 467
P+ W + EV R T E +G G FG ++ +VAVK Q + +
Sbjct: 5 PQKPWWEDEW-EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA 60
Query: 468 FDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLN 526
F E +MK + ++ LV++ + + E ++ E+M +GSL L + + I L I + L+
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 527 IMIDVASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQT 585
+ +A + ++ N+ IH DL+ +N+L+ DT+ ++DFG+ +L+ ED T
Sbjct: 120 MAAQIAEGMAFIEERNY----IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAR 173
Query: 586 QTLA-TIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE G DV+SFGI+L EI
Sbjct: 174 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 14/216 (6%)
Query: 408 PKATWRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKS 467
P+ W + EV R T E +G G FG ++ +VAVK Q + +
Sbjct: 1 PQKPWWEDEW-EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA 56
Query: 468 FDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLN 526
F E +MK + ++ LV++ + + E ++ E+M +GSL L + + I L I + L+
Sbjct: 57 FLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLD 115
Query: 527 IMIDVASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQT 585
+ +A + ++ N+ IH DL+ +N+L+ DT+ ++DFG+ +L+ ED T
Sbjct: 116 MAAQIAEGMAFIEERNY----IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAR 169
Query: 586 QTLA-TIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE G DV+SFGI+L EI
Sbjct: 170 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 14/216 (6%)
Query: 408 PKATWRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKS 467
P+ W + EV R T E +G G FG ++ +VAVK Q + +
Sbjct: 5 PQKPWWEDEW-EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA 60
Query: 468 FDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLN 526
F E +MK + ++ LV++ + + E ++ E+M +GSL L + + I L I + L+
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 527 IMIDVASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQT 585
+ +A + ++ N+ IH DL+ +N+L+ DT+ ++DFG+ +L+ ED T
Sbjct: 120 MAAQIAEGMAFIEERNY----IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAR 173
Query: 586 QTLA-TIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE G DV+SFGI+L EI
Sbjct: 174 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 209
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 14/216 (6%)
Query: 408 PKATWRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKS 467
P+ W + EV R T E +G G FG ++ +VAVK Q + +
Sbjct: 4 PQKPWWEDEW-EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA 59
Query: 468 FDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLN 526
F E +MK + ++ LV++ + + E ++ E+M +GSL L + + I L I + L+
Sbjct: 60 FLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLD 118
Query: 527 IMIDVASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQT 585
+ +A + ++ N+ IH DL+ +N+L+ DT+ ++DFG+ +L+ ED T
Sbjct: 119 MAAQIAEGMAFIEERNY----IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAR 172
Query: 586 QTLA-TIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE G DV+SFGI+L EI
Sbjct: 173 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 208
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 14/216 (6%)
Query: 408 PKATWRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKS 467
P+ W + EV R T E +G G FG ++ +VAVK Q + +
Sbjct: 9 PQKPWWEDEW-EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA 64
Query: 468 FDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLN 526
F E +MK + ++ LV++ + + E ++ E+M +GSL L + + I L I + L+
Sbjct: 65 FLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLD 123
Query: 527 IMIDVASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQT 585
+ +A + ++ N+ IH DL+ +N+L+ DT+ ++DFG+ +L+ ED T
Sbjct: 124 MAAQIAEGMAFIEERNY----IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAR 177
Query: 586 QTLA-TIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE G DV+SFGI+L EI
Sbjct: 178 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 13/194 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 492 NEEFKELVLEHMPHGSLEKCLY-SSNCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V E+M GSL L + L + Q +++ +AS + Y+ N+ +H
Sbjct: 74 EEPIX-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY----VHR 128
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 609 DVYSFGIMLMEIHS 622
DV+SFGI+L E+ +
Sbjct: 187 DVWSFGILLTELTT 200
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN 492
IG G FG ++ + +VA+K + + + F E E+M + + LV++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 493 EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLK 552
+ LV E M HG L L + + L + +DV + YL VIH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLA 130
Query: 553 PSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYS 612
N L+ + V +SDFG+T+ ++ +DQ + T T + + +PE R + DV+S
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 613 FGIMLMEIHS 622
FG+++ E+ S
Sbjct: 190 FGVLMWEVFS 199
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 101/192 (52%), Gaps = 13/192 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 492 NEEFKELVLEHMPHGSLEKCLY-SSNCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V E+M GSL L + L + Q +++ +AS + Y+ N+ +H
Sbjct: 333 EEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY----VHR 387
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 445
Query: 609 DVYSFGIMLMEI 620
DV+SFGI+L E+
Sbjct: 446 DVWSFGILLTEL 457
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 13/194 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 492 NEEFKELVLEHMPHGSLEKCLY-SSNCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V E+M GSL L + L + Q +++ +AS + Y+ N+ +H
Sbjct: 77 EEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY----VHR 131
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 189
Query: 609 DVYSFGIMLMEIHS 622
DV+SFGI+L E+ +
Sbjct: 190 DVWSFGILLTELTT 203
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 13/194 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 492 NEEFKELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V+E+M GSL L L + Q +++ +AS + Y+ N+ +H
Sbjct: 84 EEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY----VHR 138
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 609 DVYSFGIMLMEIHS 622
DV+SFGI+L E+ +
Sbjct: 197 DVWSFGILLTELTT 210
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 101/192 (52%), Gaps = 13/192 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 492 NEEFKELVLEHMPHGSLEKCLY-SSNCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V E+M GSL L + L + Q +++ +AS + Y+ N+ +H
Sbjct: 250 EEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY----VHR 304
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 609 DVYSFGIMLMEI 620
DV+SFGI+L E+
Sbjct: 363 DVWSFGILLTEL 374
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 13/194 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK I + LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 492 NEEFKELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V E+M GSL L L + Q +++ +AS + Y+ N+ +H
Sbjct: 84 EEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY----VHR 138
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 609 DVYSFGIMLMEIHS 622
DV+SFGI+L E+ +
Sbjct: 197 DVWSFGILLTELTT 210
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 422 RATYGFNENNL-----IGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIE 471
R F E +L +GKG FG++ R G VAVK + F+ E
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 62
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMI 529
EI+KS+ + N+VK C + + +L++E++P+GSL L +D + L
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 122
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-- 587
+ +EYL IH +L N+L+++ + DFG+TK+L +D+ + +
Sbjct: 123 QICKGMEYLGTK---RYIHRNLATRNILVENENRVKIGDFGLTKVL-PQDKEYYKVKEPG 178
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE E + DV+SFG++L E+
Sbjct: 179 ESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 211
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 101/192 (52%), Gaps = 13/192 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 492 NEEFKELVLEHMPHGSLEKCLY-SSNCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V E+M GSL L + L + Q +++ +AS + Y+ N+ +H
Sbjct: 250 EEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY----VHR 304
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 609 DVYSFGIMLMEI 620
DV+SFGI+L E+
Sbjct: 363 DVWSFGILLTEL 374
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 13/194 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 492 NEEFKELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V+E+M GSL L L + Q +++ +AS + Y+ N+ +H
Sbjct: 84 EEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY----VHR 138
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 609 DVYSFGIMLMEIHS 622
DV+SFGI+L E+ +
Sbjct: 197 DVWSFGILLTELTT 210
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN 492
IG G FG ++ + +VA+K + + + F E E+M + + LV++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 493 EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLK 552
+ LV E M HG L L + + L + +DV + YL VIH DL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 133
Query: 553 PSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYS 612
N L+ + V +SDFG+T+ ++ +DQ + T T + + +PE R + DV+S
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 192
Query: 613 FGIMLMEIHS 622
FG+++ E+ S
Sbjct: 193 FGVLMWEVFS 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN 492
IG G FG ++ + +VA+K + + + F E E+M + + LV++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 493 EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLK 552
+ LV E M HG L L + + L + +DV + YL VIH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 130
Query: 553 PSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYS 612
N L+ + V +SDFG+T+ ++ +DQ + T T + + +PE R + DV+S
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 613 FGIMLMEIHS 622
FG+++ E+ S
Sbjct: 190 FGVLMWEVFS 199
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN 492
IG G FG ++ + +VA+K + + + F E E+M + + LV++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 493 EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLK 552
+ LV E M HG L L + + L + +DV + YL VIH DL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 128
Query: 553 PSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYS 612
N L+ + V +SDFG+T+ ++ +DQ + T T + + +PE R + DV+S
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 613 FGIMLMEIHS 622
FG+++ E+ S
Sbjct: 188 FGVLMWEVFS 197
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 418 LEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKS 477
EV R T E +G G FG ++ +VAVK Q + +F E +MK
Sbjct: 8 WEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 64
Query: 478 IHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLE 536
+ ++ LV++ + + E ++ E+M +GSL L + + I L I + L++ +A +
Sbjct: 65 LQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 537 YLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYI 594
++ N+ IH DL+ +N+L+ DT+ ++DFG+ +L+ ED T + I +
Sbjct: 124 FIEERNY----IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWT 177
Query: 595 APEYGREGRVFANGDVYSFGIMLMEI 620
APE G DV+SFGI+L EI
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEI 203
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 13/194 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 492 NEEFKELVLEHMPHGSLEKCLY-SSNCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V E+M GSL L + L + Q +++ +AS + Y+ N+ +H
Sbjct: 81 EEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY----VHR 135
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 609 DVYSFGIMLMEIHS 622
DV+SFGI+L E+ +
Sbjct: 194 DVWSFGILLTELTT 207
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 418 LEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKS 477
EV R T E +G G FG ++ +VAVK Q + +F E +MK
Sbjct: 8 WEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 64
Query: 478 IHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLE 536
+ ++ LV++ + + E ++ E+M +GSL L + + I L I + L++ +A +
Sbjct: 65 LQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 537 YLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYI 594
++ N+ IH DL+ +N+L+ DT+ ++DFG+ +L+ ED T + I +
Sbjct: 124 FIEERNY----IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWT 177
Query: 595 APEYGREGRVFANGDVYSFGIMLMEI 620
APE G DV+SFGI+L EI
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEI 203
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 418 LEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKS 477
EV R T E +G G FG ++ +VAVK Q + +F E +MK
Sbjct: 9 WEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 65
Query: 478 IHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLE 536
+ ++ LV++ + + E ++ E+M +GSL L + + I L I + L++ +A +
Sbjct: 66 LQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 124
Query: 537 YLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYI 594
++ N+ IH DL+ +N+L+ DT+ ++DFG+ +L+ ED T + I +
Sbjct: 125 FIEERNY----IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWT 178
Query: 595 APEYGREGRVFANGDVYSFGIMLMEI 620
APE G DV+SFGI+L EI
Sbjct: 179 APEAINYGTFTIKSDVWSFGILLTEI 204
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 418 LEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKS 477
EV R T E +G G FG ++ +VAVK Q + +F E +MK
Sbjct: 8 WEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 64
Query: 478 IHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLE 536
+ ++ LV++ + + E ++ E+M +GSL L + + I L I + L++ +A +
Sbjct: 65 LQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 537 YLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYI 594
++ N+ IH DL+ +N+L+ DT+ ++DFG+ +L+ ED T + I +
Sbjct: 124 FIEERNY----IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWT 177
Query: 595 APEYGREGRVFANGDVYSFGIMLMEI 620
APE G DV+SFGI+L EI
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEI 203
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 13/194 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 492 NEEFKELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V E+M GSL L L + Q +++ +AS + Y+ N+ +H
Sbjct: 73 EEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY----VHR 127
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 185
Query: 609 DVYSFGIMLMEIHS 622
DV+SFGI+L E+ +
Sbjct: 186 DVWSFGILLTELTT 199
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 13/194 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 492 NEEFKELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V E+M GSL L L + Q +++ +AS + Y+ N+ +H
Sbjct: 84 EEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY----VHR 138
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 609 DVYSFGIMLMEIHS 622
DV+SFGI+L E+ +
Sbjct: 197 DVWSFGILLTELTT 210
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 13/194 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 492 NEEFKELVLEHMPHGSLEKCLY-SSNCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V E+M GSL L + L + Q +++ +AS + Y+ N+ +H
Sbjct: 81 EEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY----VHR 135
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 609 DVYSFGIMLMEIHS 622
DV+SFGI+L E+ +
Sbjct: 194 DVWSFGILLTELTT 207
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN 492
IG G FG ++ + +VA+K + + + F E E+M + + LV++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 493 EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLK 552
+ LV E M HG L L + + L + +DV + YL VIH DL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 131
Query: 553 PSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYS 612
N L+ + V +SDFG+T+ ++ +DQ + T T + + +PE R + DV+S
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 190
Query: 613 FGIMLMEIHS 622
FG+++ E+ S
Sbjct: 191 FGVLMWEVFS 200
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 13/194 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 492 NEEFKELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V E+M GSL L L + Q +++ +AS + Y+ N+ +H
Sbjct: 75 EEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY----VHR 129
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 609 DVYSFGIMLMEIHS 622
DV+SFGI+L E+ +
Sbjct: 188 DVWSFGILLTELTT 201
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 419 EVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSI 478
EV R T E +G G FG ++ +VAVK Q + +F E +MK +
Sbjct: 4 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 60
Query: 479 HYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEY 537
++ LV++ + + E ++ E+M +GSL L + + I L I + L++ +A + +
Sbjct: 61 QHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 119
Query: 538 LH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIA 595
+ N+ IH DL+ +N+L+ DT+ ++DFG+ +L+ ED T + I + A
Sbjct: 120 IEERNY----IHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTA 173
Query: 596 PEYGREGRVFANGDVYSFGIMLMEI 620
PE G DV+SFGI+L EI
Sbjct: 174 PEAINYGTFTIKSDVWSFGILLTEI 198
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 101/192 (52%), Gaps = 13/192 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 492 NEEFKELVLEHMPHGSLEKCLY-SSNCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V E+M GSL L + L + Q +++ +AS + Y+ N+ +H
Sbjct: 250 EEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY----VHR 304
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 609 DVYSFGIMLMEI 620
DV+SFGI+L E+
Sbjct: 363 DVWSFGILLTEL 374
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 430 NNLIGKGGFGTIYKSRIG-DG--MEVAVKVFHLQCGRA-FKSFDIECEIM-KSIHYRNLV 484
++IG+G FG + K+RI DG M+ A+K + + F E E++ K H+ N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI---------------LDIFQRLNIMI 529
++ +C + + L +E+ PHG+L L S + L Q L+
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA 589
DVA ++YL IH DL N+L+ + VA ++DFG+++ G++ + +T
Sbjct: 150 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 203
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++A E N DV+S+G++L EI S
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 100/192 (52%), Gaps = 13/192 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 492 NEEFKELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V E+M GSL L L + Q +++ +AS + Y+ N+ +H
Sbjct: 251 EEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY----VHR 305
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 363
Query: 609 DVYSFGIMLMEI 620
DV+SFGI+L E+
Sbjct: 364 DVWSFGILLTEL 375
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 430 NNLIGKGGFGTIYKSRIG-DG--MEVAVKVFHLQCGRA-FKSFDIECEIM-KSIHYRNLV 484
++IG+G FG + K+RI DG M+ A+K + + F E E++ K H+ N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI---------------LDIFQRLNIMI 529
++ +C + + L +E+ PHG+L L S + L Q L+
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA 589
DVA ++YL IH DL N+L+ + VA ++DFG+++ G++ + +T
Sbjct: 140 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 193
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++A E N DV+S+G++L EI S
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 13/194 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 492 NEEFKELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V E+M GSL L L + Q +++ +AS + Y+ N+ +H
Sbjct: 84 EEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY----VHR 138
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 609 DVYSFGIMLMEIHS 622
DV+SFGI+L E+ +
Sbjct: 197 DVWSFGILLTELTT 210
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 5/190 (2%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN 492
IG G FG ++ + +VA+K + + F E E+M + + LV++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 493 EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLK 552
+ LV E M HG L L + + L + +DV + YL VIH DL
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 150
Query: 553 PSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYS 612
N L+ + V +SDFG+T+ ++ +DQ + T T + + +PE R + DV+S
Sbjct: 151 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 209
Query: 613 FGIMLMEIHS 622
FG+++ E+ S
Sbjct: 210 FGVLMWEVFS 219
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 433 IGKGGFGTIY-----KSRIGDGMEVAVKVFHLQCGRAFKS-FDIECEIMKSIHYRNLVKI 486
+G+G FG + + G G VAVK CG +S + E EI++++++ ++VK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 487 ISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
C ++ K +LV+E++P GSL L +C+ + Q L + + YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCV-GLAQLLLFAQQICEGMAYLHAQH-- 132
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI-GEDQSMTQTQTLATIGYIAPEYGREGR 603
IH L NVLLD+ + + DFG+ K + G + + + + + APE +E +
Sbjct: 133 -YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 191
Query: 604 VFANGDVYSFGIMLMEI 620
+ DV+SFG+ L E+
Sbjct: 192 FYYASDVWSFGVTLYEL 208
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 433 IGKGGFGTIY-----KSRIGDGMEVAVKVFHLQCGRAFKS-FDIECEIMKSIHYRNLVKI 486
+G+G FG + + G G VAVK CG +S + E EI++++++ ++VK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 487 ISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
C ++ K +LV+E++P GSL L +C+ + Q L + + YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCV-GLAQLLLFAQQICEGMAYLHAQH-- 131
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI-GEDQSMTQTQTLATIGYIAPEYGREGR 603
IH L NVLLD+ + + DFG+ K + G + + + + + APE +E +
Sbjct: 132 -YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 190
Query: 604 VFANGDVYSFGIMLMEI 620
+ DV+SFG+ L E+
Sbjct: 191 FYYASDVWSFGVTLYEL 207
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 115/252 (45%), Gaps = 37/252 (14%)
Query: 428 NENNLIGKGGFGTIYKSRIGDG---MEVAVKVFHLQCGRAFKS---FDIECEIMKSIHYR 481
+IG G FG +YK + EV V + L+ G K F E IM +
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 482 NLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYL-HF 540
N++++ S + ++ E+M +G+L+K L + + Q + ++ +A+ ++YL +
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYG 599
N+ +H DL N+L++ +V +SDFG++++L + + + T + I + APE
Sbjct: 167 NY----VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 600 REGRVFANGDVYSFGIMLMEIHSAKQQ-------------------------CVSFVFNL 634
+ + DV+SFGI++ E+ + ++ C S ++ L
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQL 282
Query: 635 AMECTIESLELR 646
M+C + R
Sbjct: 283 MMQCWQQERARR 294
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 55/269 (20%)
Query: 433 IGKGGFGTIYKSR------IGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKI 486
+G+G FG ++ + D M VAVK A K F E E++ ++ + ++VK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 487 ISSCSNEEFKELVLEHMPHGSLEKCLYS---------------SNCILDIFQRLNIMIDV 531
C + + +V E+M HG L K L + + L + Q L+I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 532 ASVLEYL---HFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTL 588
AS + YL HF +H DL N L+ ++ + DFG+++ + D T+
Sbjct: 143 ASGMVYLASQHF------VHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 589 ATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQ---------------------- 626
I ++ PE + DV+SFG++L EI + +Q
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLER 256
Query: 627 ---CVSFVFNLAMECTIESLELRINAKEI 652
C V+++ + C + R+N KEI
Sbjct: 257 PRVCPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 101/194 (52%), Gaps = 13/194 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 492 NEEFKELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V+E+M G L L L + Q +++ +AS + Y+ N+ +H
Sbjct: 84 EEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY----VHR 138
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 609 DVYSFGIMLMEIHS 622
DV+SFGI+L E+ +
Sbjct: 197 DVWSFGILLTELTT 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 13/194 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 492 NEEFKELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V E+M GSL L L + Q +++ +AS + Y+ N+ +H
Sbjct: 84 EEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY----VHR 138
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 609 DVYSFGIMLMEIHS 622
DV+SFGI+L E+ +
Sbjct: 197 DVWSFGILLTELTT 210
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 30/237 (12%)
Query: 433 IGKGGFGTIYKSRI------GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKI 486
+G+G FG ++ + D M VAVK A + F E E++ + ++++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 487 ISSCSNEEFKELVLEHMPHGSLEKCLYS--------------SNCILDIFQRLNIMIDVA 532
C+ +V E+M HG L + L S + L + Q L + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 533 SVLEYL---HFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA 589
+ + YL HF +H DL N L+ +V + DFG+++ + D +T+
Sbjct: 169 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVSFVFNLAMECTIESLEL 645
I ++ PE + DV+SFG++L EI + KQ A++C + EL
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL 279
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 419 EVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSI 478
EV R T E +G G FG ++ +VAVK Q + +F E +MK +
Sbjct: 5 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 61
Query: 479 HYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEY 537
++ LV++ + + E ++ E+M +GSL L + + I L I + L++ +A + +
Sbjct: 62 QHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 120
Query: 538 LH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIA 595
+ N+ IH +L+ +N+L+ DT+ ++DFG+ +L+ ED T + I + A
Sbjct: 121 IEERNY----IHRNLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTA 174
Query: 596 PEYGREGRVFANGDVYSFGIMLMEI 620
PE G DV+SFGI+L EI
Sbjct: 175 PEAINYGTFTIKSDVWSFGILLTEI 199
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 14/197 (7%)
Query: 433 IGKGGFGTIY-----KSRIGDGMEVAVKVFHLQCGRAFKS-FDIECEIMKSIHYRNLVKI 486
+G+G FG + + G G VAVK CG +S + E +I++++++ +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 487 ISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
C ++ K +LV+E++P GSL Y + + Q L + + YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLHAQH-- 137
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI-GEDQSMTQTQTLATIGYIAPEYGREGR 603
IH +L NVLLD+ + + DFG+ K + G + + + + + APE +E +
Sbjct: 138 -YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 604 VFANGDVYSFGIMLMEI 620
+ DV+SFG+ L E+
Sbjct: 197 FYYASDVWSFGVTLYEL 213
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 12/215 (5%)
Query: 408 PKATWRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKS 467
P+ W + ++ E+ R + + +G G FG ++ + +VAVK + ++
Sbjct: 174 PQKPWEKDAW-EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEA 229
Query: 468 FDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNI 527
F E +MK++ + LVK+ + + E ++ E M GSL L S Q L
Sbjct: 230 FLAEANVMKTLQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSK---QPLPK 285
Query: 528 MIDV-ASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ 586
+ID A + E + F IH DL+ +N+L+ ++V ++DFG+ +++ ED T +
Sbjct: 286 LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI--EDNEYTARE 343
Query: 587 TLA-TIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I + APE G DV+SFGI+LMEI
Sbjct: 344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 378
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 430 NNLIGKGGFGTIYKSRIG-DG--MEVAVKVFHLQCGRA-FKSFDIECEIM-KSIHYRNLV 484
++IG+G FG + K+RI DG M+ A+K + + F E E++ K H+ N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI---------------LDIFQRLNIMI 529
++ +C + + L +E+ PHG+L L S + L Q L+
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA 589
DVA ++YL IH +L N+L+ + VA ++DFG+++ G++ + +T
Sbjct: 147 DVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 200
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++A E N DV+S+G++L EI S
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 14/197 (7%)
Query: 433 IGKGGFGTIY-----KSRIGDGMEVAVKVFHLQCGRAFKS-FDIECEIMKSIHYRNLVKI 486
+G+G FG + + G G VAVK CG +S + E +I++++++ +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 487 ISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
C ++ K +LV+E++P GSL Y + + Q L + + YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLHSQH-- 137
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI-GEDQSMTQTQTLATIGYIAPEYGREGR 603
IH +L NVLLD+ + + DFG+ K + G + + + + + APE +E +
Sbjct: 138 -YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 604 VFANGDVYSFGIMLMEI 620
+ DV+SFG+ L E+
Sbjct: 197 FYYASDVWSFGVTLYEL 213
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 30/237 (12%)
Query: 433 IGKGGFGTIYKSRI------GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKI 486
+G+G FG ++ + D M VAVK A + F E E++ + ++++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 487 ISSCSNEEFKELVLEHMPHGSLEKCLYS--------------SNCILDIFQRLNIMIDVA 532
C+ +V E+M HG L + L S + L + Q L + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 533 SVLEYL---HFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA 589
+ + YL HF +H DL N L+ +V + DFG+++ + D +T+
Sbjct: 140 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVSFVFNLAMECTIESLEL 645
I ++ PE + DV+SFG++L EI + KQ A++C + EL
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL 250
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKS-FDIECEIMKSIHYRNLVKIISSC 490
IG+G FG ++ R+ D VAVK K+ F E I+K + N+V++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 491 SNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCD 550
+ ++ +V+E + G L + L + L ++ D A+ +EYL IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRD 238
Query: 551 LKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDV 610
L N L+ + V +SDFG+++ + + + + APE GR + DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 611 YSFGIMLMEIHS 622
+SFGI+L E S
Sbjct: 299 WSFGILLWETFS 310
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 13/194 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG ++ VA+K L+ G + ++F E ++MK + + LV++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 492 NEEFKELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V E+M G L L L + Q +++ +AS + Y+ N+ +H
Sbjct: 84 EEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY----VHR 138
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + +V ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 609 DVYSFGIMLMEIHS 622
DV+SFGI+L E+ +
Sbjct: 197 DVWSFGILLTELTT 210
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 30/237 (12%)
Query: 433 IGKGGFGTIYKSRI------GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKI 486
+G+G FG ++ + D M VAVK A + F E E++ + ++++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 487 ISSCSNEEFKELVLEHMPHGSLEKCLYS--------------SNCILDIFQRLNIMIDVA 532
C+ +V E+M HG L + L S + L + Q L + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 533 SVLEYL---HFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA 589
+ + YL HF +H DL N L+ +V + DFG+++ + D +T+
Sbjct: 146 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVSFVFNLAMECTIESLEL 645
I ++ PE + DV+SFG++L EI + KQ A++C + EL
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL 256
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 13/192 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G FG ++ +VA+K L+ G + +SF E +IMK + + LV++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKT--LKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNC-ILDIFQRLNIMIDVASVLEYL-HFNFLVPVIHC 549
E +V E+M GSL L L + +++ VA+ + Y+ N+ IH
Sbjct: 75 EEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY----IHR 129
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANG 608
DL+ +N+L+ + ++ ++DFG+ +L+ ED T Q I + APE GR
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 609 DVYSFGIMLMEI 620
DV+SFGI+L E+
Sbjct: 188 DVWSFGILLTEL 199
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 13/206 (6%)
Query: 418 LEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKS 477
EV R T E +G G G ++ +VAVK Q + +F E +MK
Sbjct: 8 WEVPRETLKLVER--LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQ 64
Query: 478 IHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLE 536
+ ++ LV++ + + E ++ E+M +GSL L + + I L I + L++ +A +
Sbjct: 65 LQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 537 YLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYI 594
++ N+ IH DL+ +N+L+ DT+ ++DFG+ +L+ ED T + I +
Sbjct: 124 FIEERNY----IHRDLRAANILVSDTLSCKIADFGLARLI--EDAEXTAREGAKFPIKWT 177
Query: 595 APEYGREGRVFANGDVYSFGIMLMEI 620
APE G DV+SFGI+L EI
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEI 203
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKS-FDIECEIMKSIHYRNLVKIISSC 490
IG+G FG ++ R+ D VAVK K+ F E I+K + N+V++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 491 SNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCD 550
+ ++ +V+E + G L + L + L ++ D A+ +EYL IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRD 238
Query: 551 LKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDV 610
L N L+ + V +SDFG+++ + + + + APE GR + DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 611 YSFGIMLMEIHS 622
+SFGI+L E S
Sbjct: 299 WSFGILLWETFS 310
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 20/221 (9%)
Query: 416 SYLEVCRATYGFNEN---------NLIGKGGFGTIY--KSRIGDGMEVAVKVFHLQCG-- 462
+Y E RA F +IG G G + + R+ +V V + L+ G
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 463 -RAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDI 521
R + F E IM + N++++ + +V E+M +GSL+ L + + I
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 522 FQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQ 580
Q + ++ V + + YL + +H DL NVL+D +V +SDFG++++L + D
Sbjct: 151 MQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 581 SMTQTQTLATIGYIAPEYGREGRVFANG-DVYSFGIMLMEI 620
+ T T I + APE R F++ DV+SFG+++ E+
Sbjct: 208 AXTTTGGKIPIRWTAPE-AIAFRTFSSASDVWSFGVVMWEV 247
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 20/221 (9%)
Query: 416 SYLEVCRATYGFNEN---------NLIGKGGFGTIY--KSRIGDGMEVAVKVFHLQCG-- 462
+Y E RA F +IG G G + + R+ +V V + L+ G
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 463 -RAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDI 521
R + F E IM + N++++ + +V E+M +GSL+ L + + I
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 522 FQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQ 580
Q + ++ V + + YL + +H DL NVL+D +V +SDFG++++L + D
Sbjct: 151 MQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 581 SMTQTQTLATIGYIAPEYGREGRVFANG-DVYSFGIMLMEI 620
+ T T I + APE R F++ DV+SFG+++ E+
Sbjct: 208 AYTTTGGKIPIRWTAPE-AIAFRTFSSASDVWSFGVVMWEV 247
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 433 IGKGGFGTIYKSRI---GD--GMEVAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVKI 486
+G+G FG + R GD G +VAVK + G E EI++++++ N+VK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 487 ISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
C+ + +L++E +P GSL++ L + +++ Q+L + + ++YL V
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 148
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMT-QTQTLATIGYIAPEYGREGR 603
H DL NVL++ + DFG+TK + + + T + + + + APE + +
Sbjct: 149 ---HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 205
Query: 604 VFANGDVYSFGIMLMEI 620
+ DV+SFG+ L E+
Sbjct: 206 FYIASDVWSFGVTLHEL 222
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 12/211 (5%)
Query: 412 WRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIE 471
W + ++ E+ R + + +G G FG ++ + +VAVK + ++F E
Sbjct: 5 WEKDAW-EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAE 60
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDV 531
+MK++ + LVK+ + + E ++ E M GSL L S Q L +ID
Sbjct: 61 ANVMKTLQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSK---QPLPKLIDF 116
Query: 532 -ASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA- 589
A + E + F IH DL+ +N+L+ ++V ++DFG+ +++ ED T +
Sbjct: 117 SAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKF 174
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I + APE G DV+SFGI+LMEI
Sbjct: 175 PIKWTAPEAINFGSFTIKSDVWSFGILLMEI 205
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 433 IGKGGFGTIYKSRI---GD--GMEVAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVKI 486
+G+G FG + R GD G +VAVK + G E EI++++++ N+VK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 487 ISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
C+ + +L++E +P GSL++ L + +++ Q+L + + ++YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR--- 133
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMT-QTQTLATIGYIAPEYGREGR 603
+H DL NVL++ + DFG+TK + + + T + + + + APE + +
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 193
Query: 604 VFANGDVYSFGIMLMEI 620
+ DV+SFG+ L E+
Sbjct: 194 FYIASDVWSFGVTLHEL 210
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 95/194 (48%), Gaps = 13/194 (6%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHL--QCGRAFKSFDIECEIMKSIHYRNLVKIISS 489
IG G FGT+YK + GD VAVK+ + F++F E +++ + N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ + +V + SL K L+ +FQ ++I A ++YLH +IH
Sbjct: 101 MTKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHR 156
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR--EGRVFA- 606
D+K +N+ L + + + DFG+ + S Q ++ ++APE R + F+
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 607 NGDVYSFGIMLMEI 620
DVYS+GI+L E+
Sbjct: 217 QSDVYSYGIVLYEL 230
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 14/209 (6%)
Query: 425 YGFNENN---LIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHY 480
Y ++EN ++GKG +G +Y R + + + +A+K + R + E + K + +
Sbjct: 19 YEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH 78
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMI-DVASVLEYL 538
+N+V+ + S S F ++ +E +P GSL L S + D Q + + L+YL
Sbjct: 79 KNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 138
Query: 539 HFNFLVPVIHCDLKPSNVLLDD-TMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE 597
H N ++H D+K NVL++ + V +SDFG +K L G + T+T T T+ Y+APE
Sbjct: 139 HDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTETFT-GTLQYMAPE 193
Query: 598 YGREG-RVFAN-GDVYSFGIMLMEIHSAK 624
+G R + D++S G ++E+ + K
Sbjct: 194 IIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 432 LIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRA---FKSFDIECEIMKSIHYRNLVKII 487
++G GG ++ +R + D +VAVKV R + F E + ++++ +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 488 SSCSNE----EFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
+ E +V+E++ +L +++ + + + ++ D L + H N
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADACQALNFSHQNG- 136
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-LATIGYIAPEYGREG 602
+IH D+KP+N+++ T + DFGI + + S+TQT + T Y++PE R
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 603 RVFANGDVYSFGIMLMEI 620
V A DVYS G +L E+
Sbjct: 195 SVDARSDVYSLGCVLYEV 212
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 14/209 (6%)
Query: 425 YGFNENN---LIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHY 480
Y ++EN ++GKG +G +Y R + + + +A+K + R + E + K + +
Sbjct: 5 YEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH 64
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMI-DVASVLEYL 538
+N+V+ + S S F ++ +E +P GSL L S + D Q + + L+YL
Sbjct: 65 KNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 124
Query: 539 HFNFLVPVIHCDLKPSNVLLDD-TMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE 597
H N ++H D+K NVL++ + V +SDFG +K L G + T+T T T+ Y+APE
Sbjct: 125 HDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTETFT-GTLQYMAPE 179
Query: 598 YGREG-RVFAN-GDVYSFGIMLMEIHSAK 624
+G R + D++S G ++E+ + K
Sbjct: 180 IIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 16/216 (7%)
Query: 418 LEVCRATYGFNENNL-----IGKGGFGTIYKSR---IGD--GMEVAVKVFHLQCGRAFKS 467
L C+ F E +L +GKG FG++ R +GD G VAVK +
Sbjct: 11 LYACQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD 70
Query: 468 FDIECEIMKSIHYRNLVKI--ISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRL 525
F E +I+K++H +VK +S + LV+E++P G L L LD + L
Sbjct: 71 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL 130
Query: 526 NIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL-IGEDQSMTQ 584
+ +EYL V H DL N+L++ ++DFG+ KLL + +D + +
Sbjct: 131 LYSSQICKGMEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 187
Query: 585 TQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE + DV+SFG++L E+
Sbjct: 188 EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 432 LIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRA---FKSFDIECEIMKSIHYRNLVKII 487
++G GG ++ +R + D +VAVKV R + F E + ++++ +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 488 SSCSNE----EFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
+ E +V+E++ +L +++ + + + ++ D L + H N
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADACQALNFSHQNG- 136
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-LATIGYIAPEYGREG 602
+IH D+KP+N+++ T + DFGI + + S+TQT + T Y++PE R
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 603 RVFANGDVYSFGIMLMEI 620
V A DVYS G +L E+
Sbjct: 195 SVDARSDVYSLGCVLYEV 212
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSRIG--DGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+ ++G G FG + R+ E++V + L+ G + + F E IM + N++
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
++ + + +V E+M +GSL+ L + + Q + ++ +AS ++YL +
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 154
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ-TLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG++++L + ++ T+ I + +PE +
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 214
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI+L E+ S
Sbjct: 215 FTSASDVWSYGIVLWEVMS 233
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 421 CRATYGFNENNL-----IGKGGFGTIYKSR---IGD--GMEVAVKVFHLQCGRAFKSFDI 470
C+ F E +L +GKG FG++ R +GD G VAVK + F
Sbjct: 1 CQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 60
Query: 471 ECEIMKSIHYRNLVKI--ISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIM 528
E +I+K++H +VK +S + LV+E++P G L L LD + L
Sbjct: 61 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 120
Query: 529 IDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL-IGEDQSMTQTQT 587
+ +EYL V H DL N+L++ ++DFG+ KLL + +D + +
Sbjct: 121 SQICKGMEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 177
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I + APE + DV+SFG++L E+
Sbjct: 178 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSRIG--DGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+ ++G G FG + R+ E++V + L+ G + + F E IM + N++
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
++ + + +V E+M +GSL+ L + + Q + ++ +AS ++YL +
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 137
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ-TLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG++++L + ++ T+ I + +PE +
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI+L E+ S
Sbjct: 198 FTSASDVWSYGIVLWEVMS 216
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSRIG--DGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+ ++G G FG + R+ E++V + L+ G + + F E IM + N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
++ + + +V E+M +GSL+ L + + Q + ++ +AS ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ-TLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG++++L + ++ T+ I + +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI+L E+ S
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSRIG--DGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+ ++G G FG + R+ E++V + L+ G + + F E IM + N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
++ + + +V E+M +GSL+ L + + Q + ++ +AS ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ-TLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG++++L + ++ T+ I + +PE +
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI+L E+ S
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSRIG--DGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+ ++G G FG + R+ E++V + L+ G + + F E IM + N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
++ + + +V E+M +GSL+ L + + Q + ++ +AS ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ-TLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG++++L + ++ T+ I + +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI+L E+ S
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSRIG--DGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+ ++G G FG + R+ E++V + L+ G + + F E IM + N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
++ + + +V E+M +GSL+ L + + Q + ++ +AS ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ-TLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG++++L + ++ T+ I + +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI+L E+ S
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSRIG--DGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+ ++G G FG + R+ E++V + L+ G + + F E IM + N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
++ + + +V E+M +GSL+ L + + Q + ++ +AS ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ-TLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG++++L + ++ T+ I + +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI+L E+ S
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSRIG--DGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+ ++G G FG + R+ E++V + L+ G + + F E IM + N++
Sbjct: 48 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
++ + + +V E+M +GSL+ L + + Q + ++ +AS ++YL +
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 164
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ-TLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG++++L + ++ T+ I + +PE +
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 224
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI+L E+ S
Sbjct: 225 FTSASDVWSYGIVLWEVMS 243
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 102/236 (43%), Gaps = 28/236 (11%)
Query: 433 IGKGGFGTIYKSRI------GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKI 486
+G+G FG ++ + D + VAVK A K F E E++ ++ + ++VK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 487 ISSCSNEEFKELVLEHMPHGSLEKCLYSSN------------CILDIFQRLNIMIDVASV 534
C + +V E+M HG L K L + L Q L+I +A+
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 535 LEYL---HFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATI 591
+ YL HF +H DL N L+ + ++ + DFG+++ + D T+ I
Sbjct: 141 MVYLASQHF------VHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 592 GYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVSFVFNLAMECTIESLELR 646
++ PE + DV+S G++L EI + KQ N +EC + L+
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQ 250
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 427 FNENNL-----IGKGGFGTIYKSR---IGD--GMEVAVKVFHLQCGRAFKSFDIECEIMK 476
F E +L +GKG FG++ R +GD G VAVK + F E +I+K
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 477 SIHYRNLVKI--ISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV 534
++H +VK +S LV+E++P G L L LD + L +
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 123
Query: 535 LEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL-IGEDQSMTQTQTLATIGY 593
+EYL V H DL N+L++ ++DFG+ KLL + +D + + + I +
Sbjct: 124 MEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEI 620
APE + DV+SFG++L E+
Sbjct: 181 YAPESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 10/191 (5%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G FG ++ + +VAVK L+ G + ++F E +MK++ + LV++ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKT--LKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDV-ASVLEYLHFNFLVPVIHCD 550
EE ++ E+M GSL L S + +L ID A + E + + IH D
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL---IDFSAQIAEGMAYIERKNYIHRD 135
Query: 551 LKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANGD 609
L+ +NVL+ ++++ ++DFG+ +++ ED T + I + APE G D
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSD 193
Query: 610 VYSFGIMLMEI 620
V+SFGI+L EI
Sbjct: 194 VWSFGILLYEI 204
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 432 LIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRA---FKSFDIECEIMKSIHYRNLVKII 487
++G GG ++ +R + D +VAVKV R + F E + ++++ +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 488 SSCSNE----EFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
+ E +V+E++ +L +++ + + + ++ D L + H N
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADACQALNFSHQNG- 136
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-LATIGYIAPEYGREG 602
+IH D+KP+N+L+ T + DFGI + + S+ QT + T Y++PE R
Sbjct: 137 --IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGD 194
Query: 603 RVFANGDVYSFGIMLMEI 620
V A DVYS G +L E+
Sbjct: 195 SVDARSDVYSLGCVLYEV 212
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 101/199 (50%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSRIG--DGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+ ++G G FG + R+ E++V + L+ G + + F E IM + N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
++ + + +V E+M +GSL+ L + + Q + ++ +AS ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ-TLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG+ ++L + ++ T+ I + +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI+L E+ S
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 16/207 (7%)
Query: 427 FNENNL-----IGKGGFGTIYKSR---IGD--GMEVAVKVFHLQCGRAFKSFDIECEIMK 476
F E +L +GKG FG++ R +GD G VAVK + F E +I+K
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 477 SIHYRNLVKI--ISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV 534
++H +VK +S + LV+E++P G L L LD + L +
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 127
Query: 535 LEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL-IGEDQSMTQTQTLATIGY 593
+EYL V H DL N+L++ ++DFG+ KLL + +D + + + I +
Sbjct: 128 MEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEI 620
APE + DV+SFG++L E+
Sbjct: 185 YAPESLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 433 IGKGGFGTIY-----KSRIGDGMEVAVKVFHLQCGRAFKS-FDIECEIMKSIHYRNLVKI 486
+G+G FG + + G G VAVK G +S + E +I++++++ +++K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 487 ISSCSNEEFK--ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
C + +LV+E++P GSL Y + + Q L + + YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLHAQH-- 154
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI-GEDQSMTQTQTLATIGYIAPEYGREGR 603
IH DL NVLLD+ + + DFG+ K + G + + + + + APE +E +
Sbjct: 155 -YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYK 213
Query: 604 VFANGDVYSFGIMLMEI 620
+ DV+SFG+ L E+
Sbjct: 214 FYYASDVWSFGVTLYEL 230
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 101/199 (50%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSRIG--DGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+ ++G G FG + R+ E++V + L+ G + + F E IM + N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
++ + + +V E M +GSL+ L + + Q + ++ +AS ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ-TLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG++++L + ++ T+ I + +PE +
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI+L E+ S
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 431 NLIGKGGFGTIYKS-RIGDG----MEVAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLV 484
++G G FGT+YK + +G + VA+K+ + G +A F E IM S+ + +LV
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
+++ C + +LV + MPHG L + ++ + LN + +A + YL LV
Sbjct: 104 RLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV 162
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
H DL NVL+ ++DFG+ +LL G+++ I ++A E +
Sbjct: 163 ---HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 219
Query: 605 FANGDVYSFGIMLMEI 620
DV+S+G+ + E+
Sbjct: 220 THQSDVWSYGVTIWEL 235
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 101/199 (50%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSRIG--DGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+ ++G G FG + R+ E++V + L+ G + + F E IM + N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
++ + + +V E+M +GSL+ L + + Q + ++ +AS ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ-TLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG+ ++L + ++ T+ I + +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI+L E+ S
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 101/199 (50%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSRIG--DGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+ ++G G FG + R+ E++V + L+ G + + F E IM + N++
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
++ + + +V E M +GSL+ L + + Q + ++ +AS ++YL +
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 137
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ-TLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG++++L + ++ T+ I + +PE +
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI+L E+ S
Sbjct: 198 FTSASDVWSYGIVLWEVMS 216
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN 492
+G G FG + + +VAVK+ + + F E + M + + LVK CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 493 EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLK 552
E +V E++ +G L L S L+ Q L + DV + +L + IH DL
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLA 131
Query: 553 PSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYS 612
N L+D + +SDFG+T+ ++ +DQ ++ T + + APE + + DV++
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWA 190
Query: 613 FGIMLMEIHS 622
FGI++ E+ S
Sbjct: 191 FGILMWEVFS 200
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 101/199 (50%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSRIG--DGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+ ++G G FG + R+ E++V + L+ G + + F E IM + N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
++ + + +V E M +GSL+ L + + Q + ++ +AS ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---M 166
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ-TLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG++++L + ++ T+ I + +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI+L E+ S
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 431 NLIGKGGFGTIYKS-RIGDG----MEVAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLV 484
++G G FGT+YK + +G + VA+K+ + G +A F E IM S+ + +LV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
+++ C + +LV + MPHG L + ++ + LN + +A + YL LV
Sbjct: 81 RLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV 139
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
H DL NVL+ ++DFG+ +LL G+++ I ++A E +
Sbjct: 140 ---HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 196
Query: 605 FANGDVYSFGIMLMEI 620
DV+S+G+ + E+
Sbjct: 197 THQSDVWSYGVTIWEL 212
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 11/199 (5%)
Query: 432 LIGKGGFGTIYKSRIG--DGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLVKI 486
+IG G FG + + R+ E V + L+ G R + F E IM + N++++
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 487 ISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPV 546
+N ++ E M +G+L+ L ++ + Q + ++ +AS + YL +
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSY 139
Query: 547 IHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA---TIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG+++ L T+T +L I + APE +
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRK 199
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ D +S+GI++ E+ S
Sbjct: 200 FTSASDAWSYGIVMWEVMS 218
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 19/196 (9%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMI------DVASVLEYLH-FNFLV 544
E +++E M +G+L L N Q +N ++ ++S +EYL NF
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLEKKNF-- 133
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
IH DL N L+ + + ++DFG+++L+ G D I + APE +
Sbjct: 134 --IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKF 190
Query: 605 FANGDVYSFGIMLMEI 620
DV++FG++L EI
Sbjct: 191 SIKSDVWAFGVLLWEI 206
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNC-ILDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E +V E+MP+G+L L N + L + ++S +EYL NF IH
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNF----IHR 154
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + V ++DFG+++L+ G D I + APE D
Sbjct: 155 DLAARNCLVGENHVVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNTFSIKSD 213
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 214 VWAFGVLLWEI 224
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 432 LIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRA---FKSFDIECEIMKSIHYRNLVKII 487
++G GG ++ +R + +VAVKV R + F E + ++++ +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 488 SSCSNE----EFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
++ E +V+E++ +L +++ + + + ++ D L + H N
Sbjct: 79 ATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADACQALNFSHQNG- 136
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-LATIGYIAPEYGREG 602
+IH D+KP+N+++ T + DFGI + + S+TQT + T Y++PE R
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 603 RVFANGDVYSFGIMLMEI 620
V A DVYS G +L E+
Sbjct: 195 SVDARSDVYSLGCVLYEV 212
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN 492
+G G FG + + +VA+K+ + + F E ++M ++ + LV++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 493 EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLK 552
+ ++ E+M +G L L Q L + DV +EYL +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 147
Query: 553 PSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYS 612
N L++D V +SDFG+++ ++ +D+ + + + + PE + + D+++
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVL-DDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 613 FGIMLMEIHS 622
FG+++ EI+S
Sbjct: 207 FGVLMWEIYS 216
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E +++E M +G+L L N ++ L + ++S +EYL NF IH
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF----IHR 140
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 200 VWAFGVLLWEI 210
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 25/204 (12%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHL-------QCGRAFKSFDIECEIMKSIHYRNLV 484
IGKGGFG ++K R + D VA+K L + F+ F E IM ++++ N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
K+ N +V+E +P G L L + +L +M+D+A +EY+ N
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 545 PVIHCDLKPSNVLLDD-----TMVAHLSDFGITKLLIGEDQSM-TQTQTLATIGYIAPEY 598
P++H DL+ N+ L + A ++DFG+++ QS+ + + L ++APE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ------QSVHSVSGLLGNFQWMAPET 197
Query: 599 --GREGRVFANGDVYSFGIMLMEI 620
E D YSF ++L I
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTI 221
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 408 PKATWRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKS 467
P+ W + ++ E+ R + + +G G FG ++ + +VAVK + ++
Sbjct: 168 PQKPWEKDAW-EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEA 223
Query: 468 FDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNI 527
F E +MK++ + LVK+ + + E ++ E M GSL L S Q L
Sbjct: 224 FLAEANVMKTLQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSK---QPLPK 279
Query: 528 MIDV-ASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ 586
+ID A + E + F IH DL+ +N+L+ ++V ++DFG+ ++
Sbjct: 280 LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV-----------G 328
Query: 587 TLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I + APE G DV+SFGI+LMEI
Sbjct: 329 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 362
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E +++E M +G+L L N + L + ++S +EYL NF IH
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF----IHR 133
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 193 VWAFGVLLWEI 203
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G FG +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E ++ E M +G+L L N + L + ++S +EYL NF IH
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF----IHR 133
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 193 VWAFGVLLWEI 203
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E ++ E M +G+L L N ++ L + ++S +EYL NF IH
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF----IHR 140
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 200 VWAFGVLLWEI 210
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 430 NNLIGKGGFGTIYKSRIG--DGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+IG G FG + + R+ E V + L+ G R + F E IM + N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
++ +N ++ E M +G+L+ L ++ + Q + ++ +AS + YL +
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EM 135
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA---TIGYIAPEYGRE 601
+H DL N+L++ +V +SDFG+++ L T T +L I + APE
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 602 GRVFANGDVYSFGIMLMEIHS 622
+ + D +S+GI++ E+ S
Sbjct: 196 RKFTSASDAWSYGIVMWEVMS 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 432 LIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRA---FKSFDIECEIMKSIHYRNLVKII 487
++G GG ++ +R + +VAVKV R + F E + ++++ +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 488 SSCSNE----EFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
+ E +V+E++ +L +++ + + + ++ D L + H N
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADACQALNFSHQNG- 136
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-LATIGYIAPEYGREG 602
+IH D+KP+N+++ T + DFGI + + S+TQT + T Y++PE R
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 603 RVFANGDVYSFGIMLMEI 620
V A DVYS G +L E+
Sbjct: 195 SVDARSDVYSLGCVLYEV 212
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 10/191 (5%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G FG ++ + +VAVK L+ G + ++F E +MK++ + LV++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKT--LKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDV-ASVLEYLHFNFLVPVIHCD 550
EE ++ E M GSL L S + +L ID A + E + + IH D
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL---IDFSAQIAEGMAYIERKNYIHRD 134
Query: 551 LKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGREGRVFANGD 609
L+ +NVL+ ++++ ++DFG+ +++ ED T + I + APE G +
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSN 192
Query: 610 VYSFGIMLMEI 620
V+SFGI+L EI
Sbjct: 193 VWSFGILLYEI 203
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN 492
+G G FG + + +VA+K+ + + F E ++M ++ + LV++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 493 EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLK 552
+ ++ E+M +G L L Q L + DV +EYL +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 147
Query: 553 PSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYS 612
N L++D V +SDFG+++ ++ +D+ + + + + PE + + D+++
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 613 FGIMLMEIHS 622
FG+++ EI+S
Sbjct: 207 FGVLMWEIYS 216
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAF-----KSFDIECEIMKSIHYRNLVKI 486
+G GGFG + + D G +VA+K QC + + + +E +IMK +++ N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIK----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 78
Query: 487 ------ISSCSNEEFKELVLEHMPHGSLEKCL--YSSNCILDIFQRLNIMIDVASVLEYL 538
+ + + L +E+ G L K L + + C L ++ D++S L YL
Sbjct: 79 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 138
Query: 539 HFNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
H N +IH DLKP N++L ++ + D G K L DQ T+ + T+ Y+A
Sbjct: 139 HENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLA 192
Query: 596 PEYGREGRVFANGDVYSFGIMLME 619
PE + + D +SFG + E
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFE 216
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAF-----KSFDIECEIMKSIHYRNLVKI 486
+G GGFG + + D G +VA+K QC + + + +E +IMK +++ N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIK----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77
Query: 487 ------ISSCSNEEFKELVLEHMPHGSLEKCL--YSSNCILDIFQRLNIMIDVASVLEYL 538
+ + + L +E+ G L K L + + C L ++ D++S L YL
Sbjct: 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137
Query: 539 HFNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
H N +IH DLKP N++L ++ + D G K L DQ T+ + T+ Y+A
Sbjct: 138 HENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLA 191
Query: 596 PEYGREGRVFANGDVYSFGIMLME 619
PE + + D +SFG + E
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFE 215
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 25/204 (12%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHL-------QCGRAFKSFDIECEIMKSIHYRNLV 484
IGKGGFG ++K R + D VA+K L + F+ F E IM ++++ N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
K+ N +V+E +P G L L + +L +M+D+A +EY+ N
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 545 PVIHCDLKPSNVLLDD-----TMVAHLSDFGITKLLIGEDQSM-TQTQTLATIGYIAPEY 598
P++H DL+ N+ L + A ++DFG ++ QS+ + + L ++APE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ------QSVHSVSGLLGNFQWMAPET 197
Query: 599 --GREGRVFANGDVYSFGIMLMEI 620
E D YSF ++L I
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTI 221
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E ++ E M +G+L L N ++ L + ++S +EYL NF IH
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF----IHR 140
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 200 VWAFGVLLWEI 210
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E +++E M +G+L L N + L + ++S +EYL NF IH
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF----IHR 135
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 195 VWAFGVLLWEI 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E +++E M +G+L L N + L + ++S +EYL NF IH
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF----IHR 135
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 195 VWAFGVLLWEI 205
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E ++ E M +G+L L N ++ L + ++S +EYL NF IH
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF----IHR 135
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 195 VWAFGVLLWEI 205
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E ++ E M +G+L L N ++ L + ++S +EYL NF IH
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF----IHR 139
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 140 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 198
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 199 VWAFGVLLWEI 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E ++ E M +G+L L N ++ L + ++S +EYL NF IH
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF----IHR 135
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 195 VWAFGVLLWEI 205
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 151
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 152 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 210 SAXKSSDLWALGCIIYQL 227
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 101/199 (50%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSRIG--DGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+IG G FG + R+ +VAV + L+ G + + F E IM + N+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
+ + + +V+E M +G+L+ L + + Q + ++ +A+ + YL +
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLA---DM 164
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSM-TQTQTLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG+++++ + +++ T T + + APE + +
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRK 224
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI++ E+ S
Sbjct: 225 FTSASDVWSYGIVMWEVMS 243
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN 492
+G G FG + + +VA+K+ + + F E ++M ++ + LV++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 493 EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLK 552
+ ++ E+M +G L L Q L + DV +EYL +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 132
Query: 553 PSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYS 612
N L++D V +SDFG+++ ++ +D+ + + + + PE + + D+++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 613 FGIMLMEIHS 622
FG+++ EI+S
Sbjct: 192 FGVLMWEIYS 201
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 432 LIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRA---FKSFDIECEIMKSIHYRNLVKII 487
++G GG ++ +R + +VAVKV R + F E + ++++ +V +
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 95
Query: 488 SSCSNEE----FKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
+ E +V+E++ +L +++ + + + ++ D L + H N
Sbjct: 96 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADACQALNFSHQNG- 153
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-LATIGYIAPEYGREG 602
+IH D+KP+N+++ T + DFGI + + S+TQT + T Y++PE R
Sbjct: 154 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 211
Query: 603 RVFANGDVYSFGIMLMEI 620
V A DVYS G +L E+
Sbjct: 212 SVDARSDVYSLGCVLYEV 229
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E ++ E M +G+L L N ++ L + ++S +EYL NF IH
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF----IHR 140
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 200 VWAFGVLLWEI 210
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN 492
+G G FG + + +VA+K+ + + F E ++M ++ + LV++ C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 493 EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLK 552
+ ++ E+M +G L L Q L + DV +EYL +H DL
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 138
Query: 553 PSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYS 612
N L++D V +SDFG+++ ++ +D+ + + + + PE + + D+++
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 197
Query: 613 FGIMLMEIHS 622
FG+++ EI+S
Sbjct: 198 FGVLMWEIYS 207
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 431 NLIGKGGFGTIYKS--RIGDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLVK 485
+IG G FG + ++ E+ V + L+ G + + F E IM + N++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYL-HFNFLV 544
+ + ++ E M +GSL+ L ++ + Q + ++ +A+ ++YL N+
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY-- 156
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA---TIGYIAPEYGRE 601
+H DL N+L++ +V +SDFG+++ L + T T L I + APE +
Sbjct: 157 --VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 214
Query: 602 GRVFANGDVYSFGIMLMEIHS 622
+ + DV+S+GI++ E+ S
Sbjct: 215 RKFTSASDVWSYGIVMWEVMS 235
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 19/196 (9%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMI------DVASVLEYLH-FNFLV 544
E ++ E M +G+L L N Q +N ++ ++S +EYL NF
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLEKKNF-- 134
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
IH DL N L+ + + ++DFG+++L+ G D I + APE +
Sbjct: 135 --IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKF 191
Query: 605 FANGDVYSFGIMLMEI 620
DV++FG++L EI
Sbjct: 192 SIKSDVWAFGVLLWEI 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E ++ E M +G+L L N ++ L + ++S +EYL NF IH
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF----IHR 148
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 149 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 207
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 208 VWAFGVLLWEI 218
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN 492
+G G FG + + +VA+K+ + + F E ++M ++ + LV++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 493 EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLK 552
+ ++ E+M +G L L Q L + DV +EYL +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 132
Query: 553 PSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYS 612
N L++D V +SDFG+++ ++ +D+ + + + + PE + + D+++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 613 FGIMLMEIHS 622
FG+++ EI+S
Sbjct: 192 FGVLMWEIYS 201
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN 492
+G G FG + + +VA+K+ + + F E ++M ++ + LV++ C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 493 EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLK 552
+ ++ E+M +G L L Q L + DV +EYL +H DL
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 131
Query: 553 PSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYS 612
N L++D V +SDFG+++ ++ +D+ + + + + PE + + D+++
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 190
Query: 613 FGIMLMEIHS 622
FG+++ EI+S
Sbjct: 191 FGVLMWEIYS 200
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 19/196 (9%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMI------DVASVLEYLH-FNFLV 544
E ++ E M +G+L L N Q +N ++ ++S +EYL NF
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLEKKNF-- 134
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
IH DL N L+ + + ++DFG+++L+ G D I + APE +
Sbjct: 135 --IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKF 191
Query: 605 FANGDVYSFGIMLMEI 620
DV++FG++L EI
Sbjct: 192 SIKSDVWAFGVLLWEI 207
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 152
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 153 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 211 SACKSSDLWALGCIIYQL 228
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 129
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 130 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 188 SACKSSDLWALGCIIYQL 205
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 151
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 152 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 210 SACKSSDLWALGCIIYQL 227
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN 492
+G G FG + + +VA+K+ + + F E ++M ++ + LV++ C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 493 EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLK 552
+ ++ E+M +G L L Q L + DV +EYL +H DL
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 127
Query: 553 PSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYS 612
N L++D V +SDFG+++ ++ +D+ + + + + PE + + D+++
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186
Query: 613 FGIMLMEIHS 622
FG+++ EI+S
Sbjct: 187 FGVLMWEIYS 196
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 149
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 150 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 208 SACKSSDLWALGCIIYQL 225
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 128
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 129 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 187 SACKSSDLWALGCIIYQL 204
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 154
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 155 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 213 SACKSSDLWALGCIIYQL 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 152
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 153 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 211 SACKSSDLWALGCIIYQL 228
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMI------DVASVLEYLH-FNFLV 544
E ++ E M +G+L L N Q +N ++ ++S +EYL NF
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLEKKNF-- 133
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
IH DL N L+ + + ++DFG+++L+ G D I + APE +
Sbjct: 134 --IHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKF 190
Query: 605 FANGDVYSFGIMLMEIHS 622
DV++FG++L EI +
Sbjct: 191 SIKSDVWAFGVLLWEIAT 208
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 151
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 152 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 210 SACKSSDLWALGCIIYQL 227
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E ++ E M +G+L L N + L + ++S +EYL NF IH
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF----IHR 140
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 200 VWAFGVLLWEI 210
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E ++ E M +G+L L N + L + ++S +EYL NF IH
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF----IHR 135
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 195 VWAFGVLLWEI 205
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 149
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 150 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 208 SACKSSDLWALGCIIYQL 225
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 151
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 152 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 210 SACKSSDLWALGCIIYQL 227
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 126
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 127 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 185 SACKSSDLWALGCIIYQL 202
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 149
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 150 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 208 SACKSSDLWALGCIIYQL 225
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E ++ E M +G+L L N + L + ++S +EYL NF IH
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF----IHR 135
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 195 VWAFGVLLWEI 205
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E ++ E M +G+L L N ++ L + ++S +EYL NF IH
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF----IHR 137
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 197 VWAFGVLLWEI 207
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 151
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 152 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 210 SACKSSDLWALGCIIYQL 227
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 151
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 152 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 210 SASKSSDLWALGCIIYQL 227
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 148
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 149 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 207 SACKSSDLWALGCIIYQL 224
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 127
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 128 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 186 SACKSSDLWALGCIIYQL 203
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 133
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 134 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 192 SACKSSDLWALGCIIYQL 209
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIYKSRIGD------GMEVAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y+ D VAVK + R F E +MK ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD---------IFQRLNIMIDVASVLE 536
++ S + +V+E M HG L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ V H DL N ++ + DFG+T+ + D + L + ++AP
Sbjct: 145 YLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G + D++SFG++L EI S +Q
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 431 NLIGKGGFGTIYKS-RIGDG----MEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLV 484
++G G FGT++K I +G + V +KV + GR +F++ + S+ + ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
+++ C +LV +++P GSL + L LN + +A + YL + +V
Sbjct: 97 RLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 155
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
H +L NVLL ++DFG+ LL +D+ + ++ I ++A E G+
Sbjct: 156 ---HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 212
Query: 605 FANGDVYSFGIMLMEI 620
DV+S+G+ + E+
Sbjct: 213 THQSDVWSYGVTVWEL 228
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 148
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 149 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 207 SACKSSDLWALGCIIYQL 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIYKSRIGD------GMEVAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y+ D VAVK + R F E +MK ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD---------IFQRLNIMIDVASVLE 536
++ S + +V+E M HG L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ V H DL N ++ + DFG+T+ + D + L + ++AP
Sbjct: 145 YLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G + D++SFG++L EI S +Q
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E ++ E M +G+L L N ++ L + ++S +EYL NF IH
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF----IHR 339
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
+L N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 340 NLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 398
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 399 VWAFGVLLWEI 409
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 107/211 (50%), Gaps = 15/211 (7%)
Query: 418 LEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFD-------I 470
L+V + + + +G+G F T+YK+R + ++ V + ++ G ++ D
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQI-VAIKKIKLGHRSEAKDGINRTALR 61
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMID 530
E ++++ + + N++ ++ + ++ LV + M LE + ++ +L M+
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
LEYLH ++ ++H DLKP+N+LLD+ V L+DFG+ K +++ + T
Sbjct: 121 TLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--XHQVVT 175
Query: 591 IGYIAPEYGREGRVFANG-DVYSFGIMLMEI 620
Y APE R++ G D+++ G +L E+
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAEL 206
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E ++ E M +G+L L N ++ L + ++S +EYL NF IH
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF----IHR 381
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
+L N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 382 NLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 440
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 441 VWAFGVLLWEI 451
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 99/199 (49%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSR--IGDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+IG G FG + R + E+ V + L+ G + + F E IM + N++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
+ + + ++ E+M +GSL+ L ++ + Q + ++ + S ++YL +
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---M 150
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ-TLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG++++L + ++ T+ I + APE +
Sbjct: 151 SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 210
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI++ E+ S
Sbjct: 211 FTSASDVWSYGIVMWEVMS 229
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIYKSRIGD------GMEVAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y+ D VAVK + R F E +MK ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD---------IFQRLNIMIDVASVLE 536
++ S + +V+E M HG L+ L S + + + + + ++A +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ V H DL N ++ + DFG+T+ + D + L + ++AP
Sbjct: 142 YLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G + D++SFG++L EI S +Q
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 228
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 25/204 (12%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHL-------QCGRAFKSFDIECEIMKSIHYRNLV 484
IGKGGFG ++K R + D VA+K L + F+ F E IM ++++ N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
K+ N +V+E +P G L L + +L +M+D+A +EY+ N
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 545 PVIHCDLKPSNVLLDD-----TMVAHLSDFGITKLLIGEDQSM-TQTQTLATIGYIAPEY 598
P++H DL+ N+ L + A ++DF +++ QS+ + + L ++APE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ------QSVHSVSGLLGNFQWMAPET 197
Query: 599 --GREGRVFANGDVYSFGIMLMEI 620
E D YSF ++L I
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTI 221
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E ++ E M +G+L L N + L + ++S +EYL NF IH
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF----IHR 133
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
DL N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 193 VWAFGVLLWEI 203
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 431 NLIGKGGFGTIYKS-RIGDG----MEVAVKVFHLQCGR-AFKSFDIECEIMKSIHYRNLV 484
++G G FGT++K I +G + V +KV + GR +F++ + S+ + ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
+++ C +LV +++P GSL + L LN + +A + YL + +V
Sbjct: 79 RLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 137
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
H +L NVLL ++DFG+ LL +D+ + ++ I ++A E G+
Sbjct: 138 ---HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 194
Query: 605 FANGDVYSFGIMLMEI 620
DV+S+G+ + E+
Sbjct: 195 THQSDVWSYGVTVWEL 210
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G +G +Y+ + VAVK + + F E +MK I + NLV+++ C+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCI-LDIFQRLNIMIDVASVLEYLH-FNFLVPVIHC 549
E ++ E M +G+L L N + L + ++S +EYL NF IH
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF----IHR 342
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
+L N L+ + + ++DFG+++L+ G D I + APE + D
Sbjct: 343 NLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 401
Query: 610 VYSFGIMLMEI 620
V++FG++L EI
Sbjct: 402 VWAFGVLLWEI 412
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T+ +R + E A+K+ H+ E ++M + +
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ ++E L + +G L K + + R ++ S LEYLH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 156
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 157 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 215 SACKSSDLWALGCIIYQL 232
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F ++G+G F T +R + E A+K+ H+ E ++M + +
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK+ + ++E L + +G L K + + R ++ S LEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLHGK- 149
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+IH DLKP N+LL++ M ++DFG K+L E + + T Y++PE E
Sbjct: 150 --GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D+++ G ++ ++
Sbjct: 208 SACKSSDLWALGCIIYQL 225
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 99/199 (49%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSR--IGDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+IG G FG + R + E+ V + L+ G + + F E IM + N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
+ + + ++ E+M +GSL+ L ++ + Q + ++ + S ++YL +
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---M 129
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ-TLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG++++L + ++ T+ I + APE +
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI++ E+ S
Sbjct: 190 FTSASDVWSYGIVMWEVMS 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 99/199 (49%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSR--IGDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+IG G FG + R + E+ V + L+ G + + F E IM + N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
+ + + ++ E+M +GSL+ L ++ + Q + ++ + S ++YL +
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---M 135
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ-TLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG++++L + ++ T+ I + APE +
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI++ E+ S
Sbjct: 196 FTSASDVWSYGIVMWEVMS 214
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIYKSRIGD------GMEVAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y+ D VAVK + R F E +MK ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD---------IFQRLNIMIDVASVLE 536
++ S + +V+E M HG L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ V H DL N ++ + DFG+T+ + D + L + ++AP
Sbjct: 145 YLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G + D++SFG++L EI S +Q
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIYKSRIGD------GMEVAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y+ D VAVK + R F E +MK ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD---------IFQRLNIMIDVASVLE 536
++ S + +V+E M HG L+ L S + + + + + ++A +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ V H DL N ++ + DFG+T+ + D + L + ++AP
Sbjct: 144 YLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G + D++SFG++L EI S +Q
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 230
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 13/198 (6%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCG--RAFKSFDIECEIMKSIHYRNLVKIISS 489
IG G FGT+YK + GD VAVK+ ++ + ++F E +++ + N++ +
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ + +V + SL L++S ++ + ++I A ++YLH +IH
Sbjct: 77 STKPQLA-IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHR 132
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR--EGRVFA- 606
DLK +N+ L + + DFG+ + S Q +I ++APE R + ++
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 607 NGDVYSFGIMLMEIHSAK 624
DVY+FGI+L E+ + +
Sbjct: 193 QSDVYAFGIVLYELMTGQ 210
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIY----KSRIGDGME--VAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y K + D E VA+K + R F E +MK + ++V+
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYS------SNCIL---DIFQRLNIMIDVASVLE 536
++ S + +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ N V H DL N ++ + + DFG+T+ + D + L + +++P
Sbjct: 138 YLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G DV+SFG++L EI + +Q
Sbjct: 195 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 224
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIY----KSRIGDGME--VAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y K + D E VA+K + R F E +MK + ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYS------SNCIL---DIFQRLNIMIDVASVLE 536
++ S + +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ N V H DL N ++ + + DFG+T+ + D + L + +++P
Sbjct: 147 YLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G DV+SFG++L EI + +Q
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 233
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 431 NLIGKGGFGTIYKS--RIGDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLVK 485
+IG G FG + ++ E+ V + L+ G + + F E IM + N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYL-HFNFLV 544
+ + ++ E M +GSL+ L ++ + Q + ++ +A+ ++YL N+
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY-- 130
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA---TIGYIAPEYGRE 601
+H L N+L++ +V +SDFG+++ L + T T L I + APE +
Sbjct: 131 --VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 602 GRVFANGDVYSFGIMLMEIHS 622
+ + DV+S+GI++ E+ S
Sbjct: 189 RKFTSASDVWSYGIVMWEVMS 209
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHL---QCGRAFKSFDIECEIMKSIHYRNLVKIIS 488
+G GG T+Y + ++VA+K + + K F+ E + ++N+V +I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
++ LV+E++ +L + + S+ L + +N + +++ H + ++H
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAHD---MRIVH 134
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQT-QTLATIGYIAPEYGREGRVFAN 607
D+KP N+L+D + DFGI K L + S+TQT L T+ Y +PE +
Sbjct: 135 RDIKPQNILIDSNKTLKIFDFGIAKAL--SETSLTQTNHVLGTVQYFSPEQAKGEATDEC 192
Query: 608 GDVYSFGIMLMEI 620
D+YS GI+L E+
Sbjct: 193 TDIYSIGIVLYEM 205
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 100/199 (50%), Gaps = 9/199 (4%)
Query: 430 NNLIGKGGFGTIYKSRIG--DGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHYRNLV 484
+IG G FG + R+ E+ V + L+ G + + F E IM + N++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
+ + + +V E+M +GSL+ L ++ + Q + ++ +++ ++YL +
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSD---M 143
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ-TLATIGYIAPEYGREGR 603
+H DL N+L++ +V +SDFG++++L + ++ T+ I + APE +
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK 203
Query: 604 VFANGDVYSFGIMLMEIHS 622
+ DV+S+GI++ E+ S
Sbjct: 204 FTSASDVWSYGIVMWEVVS 222
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIY----KSRIGDGME--VAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y K + D E VA+K + R F E +MK + ++V+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYS------SNCIL---DIFQRLNIMIDVASVLE 536
++ S + +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ N V H DL N ++ + + DFG+T+ + D + L + +++P
Sbjct: 153 YLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G DV+SFG++L EI + +Q
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 239
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIY----KSRIGDGME--VAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y K + D E VA+K + R F E +MK + ++V+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYS------SNCIL---DIFQRLNIMIDVASVLE 536
++ S + +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ N V H DL N ++ + + DFG+T+ + D + L + +++P
Sbjct: 153 YLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G DV+SFG++L EI + +Q
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 239
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIY----KSRIGDGME--VAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y K + D E VA+K + R F E +MK + ++V+
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYS------SNCIL---DIFQRLNIMIDVASVLE 536
++ S + +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ N V H DL N ++ + + DFG+T+ + D + L + +++P
Sbjct: 175 YLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G DV+SFG++L EI + +Q
Sbjct: 232 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 261
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIY----KSRIGDGME--VAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y K + D E VA+K + R F E +MK + ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYS------SNCIL---DIFQRLNIMIDVASVLE 536
++ S + +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ N V H DL N ++ + + DFG+T+ + D + L + +++P
Sbjct: 146 YLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G DV+SFG++L EI + +Q
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 232
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIY----KSRIGDGME--VAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y K + D E VA+K + R F E +MK + ++V+
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYS------SNCIL---DIFQRLNIMIDVASVLE 536
++ S + +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ N V H DL N ++ + + DFG+T+ + D + L + +++P
Sbjct: 143 YLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 199
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G DV+SFG++L EI + +Q
Sbjct: 200 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 229
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCG--RAFKSFDIECEIMKSIHYRNLVKIISS 489
IG G FGT+YK + GD VAVK+ ++ + ++F E +++ + N++ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ + +V + SL L+ ++ + ++I A ++YLH +IH
Sbjct: 78 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 133
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR---EGRVFA 606
DLK +N+ L + + + DFG+ + S Q +I ++APE R +
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 607 NGDVYSFGIMLMEIHSAK 624
DVY+FGI+L E+ + +
Sbjct: 194 QSDVYAFGIVLYELMTGQ 211
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIY----KSRIGDGME--VAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y K + D E VA+K + R F E +MK + ++V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYS------SNCIL---DIFQRLNIMIDVASVLE 536
++ S + +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ N V H DL N ++ + + DFG+T+ + D + L + +++P
Sbjct: 140 YLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G DV+SFG++L EI + +Q
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 226
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCG--RAFKSFDIECEIMKSIHYRNLVKIISS 489
IG G FGT+YK + GD VAVK+ ++ + ++F E +++ + N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ + +V + SL L+ ++ + ++I A ++YLH +IH
Sbjct: 73 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 128
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR---EGRVFA 606
DLK +N+ L + + + DFG+ + S Q +I ++APE R +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 607 NGDVYSFGIMLMEIHSAK 624
DVY+FGI+L E+ + +
Sbjct: 189 QSDVYAFGIVLYELMTGQ 206
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIY----KSRIGDGME--VAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y K + D E VA+K + R F E +MK + ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYS------SNCIL---DIFQRLNIMIDVASVLE 536
++ S + +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ N V H DL N ++ + + DFG+T+ + D + L + +++P
Sbjct: 146 YLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G DV+SFG++L EI + +Q
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 232
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCG--RAFKSFDIECEIMKSIHYRNLVKIISS 489
IG G FGT+YK + GD VAVK+ ++ + ++F E +++ + N++ +
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ + +V + SL L+ ++ + ++I A ++YLH +IH
Sbjct: 75 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 130
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR---EGRVFA 606
DLK +N+ L + + + DFG+ + S Q +I ++APE R +
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 607 NGDVYSFGIMLMEIHSAK 624
DVY+FGI+L E+ + +
Sbjct: 191 QSDVYAFGIVLYELMTGQ 208
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIY----KSRIGDGME--VAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y K + D E VA+K + R F E +MK + ++V+
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYS------SNCIL---DIFQRLNIMIDVASVLE 536
++ S + +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ N V H DL N ++ + + DFG+T+ + D + L + +++P
Sbjct: 144 YLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 200
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G DV+SFG++L EI + +Q
Sbjct: 201 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 230
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIYKSRIGD------GMEVAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y+ D VAVK + R F E +MK ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD---------IFQRLNIMIDVASVLE 536
++ S + +V+E M HG L+ L S + + + + + ++A +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ V H +L N ++ + DFG+T+ + D + L + ++AP
Sbjct: 146 YLNAKKFV---HRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G + D++SFG++L EI S +Q
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 232
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIY----KSRIGDGME--VAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y K + D E VA+K + R F E +MK + ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYS------SNCIL---DIFQRLNIMIDVASVLE 536
++ S + +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ N V H DL N ++ + + DFG+T+ + D + L + +++P
Sbjct: 147 YLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 203
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G DV+SFG++L EI + +Q
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 233
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCG--RAFKSFDIECEIMKSIHYRNLVKIISS 489
IG G FGT+YK + GD VAVK+ ++ + ++F E +++ + N++ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ + +V + SL L+ ++ + ++I A ++YLH +IH
Sbjct: 78 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 133
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR---EGRVFA 606
DLK +N+ L + + + DFG+ + S Q +I ++APE R +
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 607 NGDVYSFGIMLMEIHSAK 624
DVY+FGI+L E+ + +
Sbjct: 194 QSDVYAFGIVLYELMTGQ 211
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIYKSRIGD------GMEVAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y+ D VAVK + R F E +MK ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD---------IFQRLNIMIDVASVLE 536
++ S + +V+E M HG L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ V H +L N ++ + DFG+T+ + D + L + ++AP
Sbjct: 145 YLNAKKFV---HRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G + D++SFG++L EI S +Q
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCG--RAFKSFDIECEIMKSIHYRNLVKIISS 489
IG G FGT+YK + GD VAVK+ ++ + ++F E +++ + N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ + +V + SL L++S ++ + ++I A ++YLH +IH
Sbjct: 89 STKPQLA-IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHR 144
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR--EGRVFA- 606
DLK +N+ L + + DFG+ S Q +I ++APE R + ++
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 607 NGDVYSFGIMLMEIHSAK 624
DVY+FGI+L E+ + +
Sbjct: 205 QSDVYAFGIVLYELMTGQ 222
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 430 NNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISS 489
++G+G FG + K++ +VA+K + R K+F +E + +++ N+VK+ +
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 70
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCI--LDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
C N LV+E+ GSL L+ + + ++ + + + YLH +I
Sbjct: 71 CLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 548 HCDLKPSNVLL-DDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFA 606
H DLKP N+LL V + DFG D T + ++APE
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSE 183
Query: 607 NGDVYSFGIMLMEIHSAKQ 625
DV+S+GI+L E+ + ++
Sbjct: 184 KCDVFSWGIILWEVITRRK 202
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCG--RAFKSFDIECEIMKSIHYRNLVKIISS 489
IG G FGT+YK + GD VAVK+ ++ + ++F E +++ + N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ + +V + SL L+ ++ + ++I A ++YLH +IH
Sbjct: 101 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 156
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR---EGRVFA 606
DLK +N+ L + + + DFG+ + S Q +I ++APE R +
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 607 NGDVYSFGIMLMEIHSAK 624
DVY+FGI+L E+ + +
Sbjct: 217 QSDVYAFGIVLYELMTGQ 234
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 430 NNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISS 489
++G+G FG + K++ +VA+K + R K+F +E + +++ N+VK+ +
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 69
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCI--LDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
C N LV+E+ GSL L+ + + ++ + + + YLH +I
Sbjct: 70 CLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 548 HCDLKPSNVLL-DDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFA 606
H DLKP N+LL V + DFG D T + ++APE
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSE 182
Query: 607 NGDVYSFGIMLMEIHSAKQ 625
DV+S+GI+L E+ + ++
Sbjct: 183 KCDVFSWGIILWEVITRRK 201
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 430 NNLIGKGGFGTIYK----SRIGDGMEVAVKVFHLQCGRAFKS-FDIECEIMKSIHYRNLV 484
N ++G+G FG +Y+ + G+ + VAVK C K F E IMK++ + ++V
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
K+I EE +++E P+G L L + L + + + + + YL +
Sbjct: 89 KLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---I 144
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
+H D+ N+L+ L DFG+++ + ED L I +++PE R
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 203
Query: 605 FANGDVYSFGIMLMEIHSAKQQ 626
DV+ F + + EI S +Q
Sbjct: 204 TTASDVWMFAVCMWEILSFGKQ 225
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCG--RAFKSFDIECEIMKSIHYRNLVKIISS 489
IG G FGT+YK + GD VAVK+ ++ + ++F E +++ + N++ +
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ + +V + SL L+ ++ + ++I A ++YLH +IH
Sbjct: 100 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 155
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR---EGRVFA 606
DLK +N+ L + + + DFG+ + S Q +I ++APE R +
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 607 NGDVYSFGIMLMEIHSAK 624
DVY+FGI+L E+ + +
Sbjct: 216 QSDVYAFGIVLYELMTGQ 233
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 23/206 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK 485
+ + +IG G FG +Y++++ D E VA+K LQ G+AFK + E +IM+ + + N+V+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-GKAFK--NRELQIMRKLDHCNIVR 77
Query: 486 II------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEY 537
+ +E + LVL+++P + S L + M + L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 538 LH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y A
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 190
Query: 596 PEYGREGRVFANG-DVYSFGIMLMEI 620
PE + + DV+S G +L E+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCG--RAFKSFDIECEIMKSIHYRNLVKIISS 489
IG G FGT+YK + GD VAVK+ ++ + ++F E +++ + N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ + +V + SL L+ ++ + ++I A ++YLH +IH
Sbjct: 73 STAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 128
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR---EGRVFA 606
DLK +N+ L + + + DFG+ + S Q +I ++APE R +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 607 NGDVYSFGIMLMEIHSAK 624
DVY+FGI+L E+ + +
Sbjct: 189 QSDVYAFGIVLYELMTGQ 206
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 23/206 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK 485
+ + +IG G FG +Y++++ D E VA+K LQ G+AFK + E +IM+ + + N+V+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-GKAFK--NRELQIMRKLDHCNIVR 77
Query: 486 II------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEY 537
+ +E + LVL+++P + S L + M + L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 538 LH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y A
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 190
Query: 596 PEYGREGRVFANG-DVYSFGIMLMEI 620
PE + + DV+S G +L E+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 430 NNLIGKGGFGTIYK----SRIGDGMEVAVKVFHLQCGRAFKS-FDIECEIMKSIHYRNLV 484
N ++G+G FG +Y+ + G+ + VAVK C K F E IMK++ + ++V
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
K+I EE +++E P+G L L + L + + + + + YL +
Sbjct: 77 KLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---I 132
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
+H D+ N+L+ L DFG+++ + ED L I +++PE R
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 191
Query: 605 FANGDVYSFGIMLMEIHSAKQQ 626
DV+ F + + EI S +Q
Sbjct: 192 TTASDVWMFAVCMWEILSFGKQ 213
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 23/206 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK 485
+ + +IG G FG +Y++++ D E VA+K LQ G+AFK + E +IM+ + + N+V+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-GKAFK--NRELQIMRKLDHCNIVR 77
Query: 486 II------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEY 537
+ +E + LVL+++P + S L + M + L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 538 LH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y A
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 190
Query: 596 PEYGREGRVFANG-DVYSFGIMLMEI 620
PE + + DV+S G +L E+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 430 NNLIGKGGFGTIYK----SRIGDGMEVAVKVFHLQCGRAFKS-FDIECEIMKSIHYRNLV 484
N ++G+G FG +Y+ + G+ + VAVK C K F E IMK++ + ++V
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
K+I EE +++E P+G L L + L + + + + + YL +
Sbjct: 73 KLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---I 128
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
+H D+ N+L+ L DFG+++ + ED L I +++PE R
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 187
Query: 605 FANGDVYSFGIMLMEIHSAKQQ 626
DV+ F + + EI S +Q
Sbjct: 188 TTASDVWMFAVCMWEILSFGKQ 209
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 21/209 (10%)
Query: 431 NLIGKGGFGTIY----KSRIGDGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLV 484
++G+G FG++ K G ++VAVK L R + F E MK + N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 485 KIISSC---SNEEFKE--LVLEHMPHGSLEKCLYSSNCI-----LDIFQRLNIMIDVASV 534
+++ C S++ + ++L M +G L L S + + L M+D+A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 535 LEYL-HFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGY 593
+EYL + NFL H DL N +L D M ++DFG++K + D + +
Sbjct: 160 MEYLSNRNFL----HRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEIHS 622
IA E + + DV++FG+ + EI +
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDG-MEVAVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R VA+KV F Q + + E EI +H+ N++++ +
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G L K L S C D + IM ++A L Y H VIH
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKS-CTFDEQRTATIMEELADALMYCHGK---KVIH 146
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S+ + T+ Y+ PE EGR+
Sbjct: 147 RDIKPENLLLGLKGELKIADFGWS----VHAPSLRRKTMCGTLDYLPPEMI-EGRMHNEK 201
Query: 609 -DVYSFGIMLMEI 620
D++ G++ E+
Sbjct: 202 VDLWCIGVLCYEL 214
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 29/224 (12%)
Query: 425 YGFNENNL-----IGKGGFGTIYKSR-IGDGME-----VAVKVF----HLQCGRAFKSFD 469
+ F NNL +G G FG + ++ G G E VAVK+ H A S
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS-- 98
Query: 470 IECEIMKSI-HYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIM 528
E +IM + + N+V ++ +C++ ++ E+ +G L L + +L+ I
Sbjct: 99 -ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 529 IDVASVLEYLHFNFLVP----------VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE 578
AS + LHF+ V IH D+ NVLL + VA + DFG+ + ++ +
Sbjct: 158 NSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Query: 579 DQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ + + ++APE + DV+S+GI+L EI S
Sbjct: 218 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 8/189 (4%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
IG+G GT+Y + + G EVA++ +LQ + E +M+ N+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
+ +V+E++ GSL + + C +D Q + + LE+LH N VIH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDI 142
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVY 611
K N+LL L+DFG + E +++ + T ++APE D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 612 SFGIMLMEI 620
S GIM +E+
Sbjct: 201 SLGIMAIEM 209
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCG--RAFKSFDIECEIMKSIHYRNLVKIISS 489
IG G FGT+YK + GD VAVK+ ++ + ++F E +++ + N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ + +V + SL L++S ++ + ++I A ++YLH +IH
Sbjct: 89 STAPQLA-IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHR 144
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR--EGRVFA- 606
DLK +N+ L + + DFG+ S Q +I ++APE R + ++
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 607 NGDVYSFGIMLMEIHSAK 624
DVY+FGI+L E+ + +
Sbjct: 205 QSDVYAFGIVLYELMTGQ 222
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIY----KSRIGDGME--VAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y K + D E VA+K + R F E +MK + ++V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYS------SNCIL---DIFQRLNIMIDVASVLE 536
++ S + +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ N V H DL N + + + DFG+T+ + D + L + +++P
Sbjct: 140 YLNANKFV---HRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G DV+SFG++L EI + +Q
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 226
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 430 NNLIGKGGFGTIYKSRI----GDGMEVAVKVFH--LQCGRAFKSFDIECEIMKSIHYRNL 483
N +IG+G FG +Y + G + AVK + G F E IMK + N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 92
Query: 484 VKIISSCSNEEFKELV-LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+ ++ C E LV L +M HG L + + + + + VA ++YL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAPEYGR 600
V H DL N +LD+ ++DFG+ + + ++ +T A + ++A E +
Sbjct: 153 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 601 EGRVFANGDVYSFGIMLMEI 620
+ DV+SFG++L E+
Sbjct: 210 TQKFTTKSDVWSFGVLLWEL 229
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 431 NLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF-------------KSFDIECEIMKS 477
++GKG FG A+KV H + G ++F E ++M+
Sbjct: 16 EVLGKGCFGQ------------AIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRC 63
Query: 478 IHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEY 537
+ + N++K I ++ + E++ G+L + S + QR++ D+AS + Y
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAY 123
Query: 538 LHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED---------QSMTQTQTL 588
LH + +IH DL N L+ + ++DFG+ +L++ E + + +
Sbjct: 124 LH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRY 180
Query: 589 ATIG---YIAPEYGREGRVFANG-DVYSFGIMLMEI 620
+G ++APE GR + DV+SFGI+L EI
Sbjct: 181 TVVGNPYWMAPEMI-NGRSYDEKVDVFSFGIVLCEI 215
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCG--RAFKSFDIECEIMKSIHYRNLVKIISS 489
IG G FGT+YK + GD VAVK+ ++ + ++F E +++ + N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ + +V + SL L+ ++ + ++I A ++YLH +IH
Sbjct: 73 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 128
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR---EGRVFA 606
DLK +N+ L + + + DFG+ S Q +I ++APE R +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 607 NGDVYSFGIMLMEIHSAK 624
DVY+FGI+L E+ + +
Sbjct: 189 QSDVYAFGIVLYELMTGQ 206
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 433 IGKGGFGTIYKSRIGD------GMEVAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVK 485
+G+G FG +Y+ D VAVK + R F E +MK ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD---------IFQRLNIMIDVASVLE 536
++ S + +V+E M HG L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
YL+ V H DL N ++ + DFG+T+ + + L + ++AP
Sbjct: 145 YLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
E ++G + D++SFG++L EI S +Q
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 414 RFSYLEVCRATYGFNE------NNLIGKGGFGTIYKSR-IGDGMEVA---VKVFHLQCGR 463
+F + R G+N IG+G F +Y++ + DG+ VA V++F L +
Sbjct: 15 QFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK 74
Query: 464 AFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSL---------EKCLYS 514
A E +++K +++ N++K +S + +VLE G L +K L
Sbjct: 75 ARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIP 134
Query: 515 SNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL 574
+ F + + S LE++H V+H D+KP+NV + T V L D G+ +
Sbjct: 135 ERTVWKYF------VQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRF 185
Query: 575 LIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
++ + T Y++PE E D++S G +L E+
Sbjct: 186 F--SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCG--RAFKSFDIECEIMKSIHYRNLVKIISS 489
IG G FGT+YK + GD VAVK+ ++ + ++F E +++ + N++ +
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ + +V + SL L+ ++ + ++I A ++YLH +IH
Sbjct: 93 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 148
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR---EGRVFA 606
DLK +N+ L + + + DFG+ S Q +I ++APE R +
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 208
Query: 607 NGDVYSFGIMLMEIHSAK 624
DVY+FGI+L E+ + +
Sbjct: 209 QSDVYAFGIVLYELMTGQ 226
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 33/220 (15%)
Query: 433 IGKGGFGTIYKSRIGDGME------VAVKVFHLQCGRAFKS-FDIECEIMKSIHYRNLVK 485
IG+G FG ++++R + VAVK+ + ++ F E +M N+VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSN----C-------------------ILDIF 522
++ C+ + L+ E+M +G L + L S + C L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 523 QRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSM 582
++L I VA+ + YL V H DL N L+ + MV ++DFG+++ + D
Sbjct: 175 EQLCIARQVAAGMAYLSERKFV---HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 583 TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
I ++ PE R DV+++G++L EI S
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCG--RAFKSFDIECEIMKSIHYRNLVKIISS 489
IG G FGT+YK + GD VAVK+ ++ + ++F E +++ + N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ + +V + SL L+ ++ + ++I A ++YLH +IH
Sbjct: 101 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHR 156
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR---EGRVFA 606
DLK +N+ L + + + DFG+ S Q +I ++APE R +
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 607 NGDVYSFGIMLMEIHSAK 624
DVY+FGI+L E+ + +
Sbjct: 217 QSDVYAFGIVLYELMTGQ 234
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 8/189 (4%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
IG+G GT+Y + + G EVA++ +LQ + E +M+ N+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
+ +V+E++ GSL + + C +D Q + + LE+LH N VIH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDI 142
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVY 611
K N+LL L+DFG + E QS T + T ++APE D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPE-QSKRST-MVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 612 SFGIMLMEI 620
S GIM +E+
Sbjct: 201 SLGIMAIEM 209
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 430 NNLIGKGGFGTIYKSRI----GDGMEVAVKVFH--LQCGRAFKSFDIECEIMKSIHYRNL 483
N +IG+G FG +Y + G + AVK + G F E IMK + N+
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 85
Query: 484 VKIISSCSNEEFKELV-LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+ ++ C E LV L +M HG L + + + + + VA ++YL
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 145
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAPEYGR 600
V H DL N +LD+ ++DFG+ + + ++ +T A + ++A E +
Sbjct: 146 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 601 EGRVFANGDVYSFGIMLMEI 620
+ DV+SFG++L E+
Sbjct: 203 TQKFTTKSDVWSFGVLLWEL 222
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 430 NNLIGKGGFGTIYKSRI----GDGMEVAVKVFH--LQCGRAFKSFDIECEIMKSIHYRNL 483
N +IG+G FG +Y + G + AVK + G F E IMK + N+
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 112
Query: 484 VKIISSCSNEEFKELV-LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+ ++ C E LV L +M HG L + + + + + VA ++YL
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 172
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAPEYGR 600
V H DL N +LD+ ++DFG+ + + ++ +T A + ++A E +
Sbjct: 173 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 601 EGRVFANGDVYSFGIMLMEI 620
+ DV+SFG++L E+
Sbjct: 230 TQKFTTKSDVWSFGVLLWEL 249
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 430 NNLIGKGGFGTIYKSRI----GDGMEVAVKVFH--LQCGRAFKSFDIECEIMKSIHYRNL 483
N +IG+G FG +Y + G + AVK + G F E IMK + N+
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 111
Query: 484 VKIISSCSNEEFKELV-LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+ ++ C E LV L +M HG L + + + + + VA ++YL
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 171
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAPEYGR 600
V H DL N +LD+ ++DFG+ + + ++ +T A + ++A E +
Sbjct: 172 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 601 EGRVFANGDVYSFGIMLMEI 620
+ DV+SFG++L E+
Sbjct: 229 TQKFTTKSDVWSFGVLLWEL 248
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
IG+G GT+Y + + G EVA++ +LQ + E +M+ N+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
+ +V+E++ GSL + + C +D Q + + LE+LH N VIH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDI 142
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVY 611
K N+LL L+DFG + E ++ + T ++APE D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 612 SFGIMLMEI 620
S GIM +E+
Sbjct: 201 SLGIMAIEM 209
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 430 NNLIGKGGFGTIYKSRI----GDGMEVAVKVFH--LQCGRAFKSFDIECEIMKSIHYRNL 483
N +IG+G FG +Y + G + AVK + G F E IMK + N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 93
Query: 484 VKIISSCSNEEFKELV-LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+ ++ C E LV L +M HG L + + + + + VA ++YL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAPEYGR 600
V H DL N +LD+ ++DFG+ + + ++ +T A + ++A E +
Sbjct: 154 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 601 EGRVFANGDVYSFGIMLMEI 620
+ DV+SFG++L E+
Sbjct: 211 TQKFTTKSDVWSFGVLLWEL 230
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
IG+G GT+Y + + G EVA++ +LQ + E +M+ N+V + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
+ +V+E++ GSL + + C +D Q + + LE+LH N VIH D+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDI 143
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVY 611
K N+LL L+DFG + E ++ + T ++APE D++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 612 SFGIMLMEI 620
S GIM +E+
Sbjct: 202 SLGIMAIEM 210
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 430 NNLIGKGGFGTIYKSRI----GDGMEVAVKVFH--LQCGRAFKSFDIECEIMKSIHYRNL 483
N +IG+G FG +Y + G + AVK + G F E IMK + N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 91
Query: 484 VKIISSCSNEEFKELV-LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+ ++ C E LV L +M HG L + + + + + VA ++YL
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 151
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAPEYGR 600
V H DL N +LD+ ++DFG+ + + ++ +T A + ++A E +
Sbjct: 152 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 601 EGRVFANGDVYSFGIMLMEI 620
+ DV+SFG++L E+
Sbjct: 209 TQKFTTKSDVWSFGVLLWEL 228
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 430 NNLIGKGGFGTIYKSRI----GDGMEVAVKVFH--LQCGRAFKSFDIECEIMKSIHYRNL 483
N +IG+G FG +Y + G + AVK + G F E IMK + N+
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 88
Query: 484 VKIISSCSNEEFKELV-LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+ ++ C E LV L +M HG L + + + + + VA ++YL
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAPEYGR 600
V H DL N +LD+ ++DFG+ + + ++ +T A + ++A E +
Sbjct: 149 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 601 EGRVFANGDVYSFGIMLMEI 620
+ DV+SFG++L E+
Sbjct: 206 TQKFTTKSDVWSFGVLLWEL 225
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 430 NNLIGKGGFGTIYKSRI----GDGMEVAVKVFH--LQCGRAFKSFDIECEIMKSIHYRNL 483
N +IG+G FG +Y + G + AVK + G F E IMK + N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 93
Query: 484 VKIISSCSNEEFKELV-LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+ ++ C E LV L +M HG L + + + + + VA ++YL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAPEYGR 600
V H DL N +LD+ ++DFG+ + + ++ +T A + ++A E +
Sbjct: 154 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 601 EGRVFANGDVYSFGIMLMEI 620
+ DV+SFG++L E+
Sbjct: 211 TQKFTTKSDVWSFGVLLWEL 230
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 430 NNLIGKGGFGTIYKSRI----GDGMEVAVKVFH--LQCGRAFKSFDIECEIMKSIHYRNL 483
N +IG+G FG +Y + G + AVK + G F E IMK + N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 92
Query: 484 VKIISSCSNEEFKELV-LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+ ++ C E LV L +M HG L + + + + + VA ++YL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAPEYGR 600
V H DL N +LD+ ++DFG+ + + ++ +T A + ++A E +
Sbjct: 153 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 601 EGRVFANGDVYSFGIMLMEI 620
+ DV+SFG++L E+
Sbjct: 210 TQKFTTKSDVWSFGVLLWEL 229
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 430 NNLIGKGGFGTIYKSRI----GDGMEVAVKVFH--LQCGRAFKSFDIECEIMKSIHYRNL 483
N +IG+G FG +Y + G + AVK + G F E IMK + N+
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 90
Query: 484 VKIISSCSNEEFKELV-LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+ ++ C E LV L +M HG L + + + + + VA ++YL
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 150
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAPEYGR 600
V H DL N +LD+ ++DFG+ + + ++ +T A + ++A E +
Sbjct: 151 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 601 EGRVFANGDVYSFGIMLMEI 620
+ DV+SFG++L E+
Sbjct: 208 TQKFTTKSDVWSFGVLLWEL 227
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 433 IGKGGFGTIYKSRIG------DGMEVAVKVFHLQCGRAFK-SFDIECEIMKSIHYRNLVK 485
+G G FG +Y+ ++ ++VAVK C + F +E I+ ++++N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLY---------SSNCILDIFQRLNIMIDVASVLE 536
I + ++LE M G L+ L SS +LD+ L++ D+A +
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 537 YLHFNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGY 593
YL N IH D+ N LL VA + DFG+ + + + + +
Sbjct: 156 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ PE EG + D +SFG++L EI S
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 433 IGKGGFGTIYKSRIG------DGMEVAVKVFHLQCGRAFK-SFDIECEIMKSIHYRNLVK 485
+G G FG +Y+ ++ ++VAVK C + F +E I+ ++++N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLY------SSNCILDIFQRLNIMIDVASVLEYLH 539
I + ++LE M G L+ L S L + L++ D+A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 540 FNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
N IH D+ N LL VA + DFG+ + + + + ++ P
Sbjct: 173 ENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHS 622
E EG + D +SFG++L EI S
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 430 NNLIGKGGFGTIYKSRI----GDGMEVAVKVFH--LQCGRAFKSFDIECEIMKSIHYRNL 483
N +IG+G FG +Y + G + AVK + G F E IMK + N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 94
Query: 484 VKIISSCSNEEFKELV-LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+ ++ C E LV L +M HG L + + + + + VA +++L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAPEYGR 600
V H DL N +LD+ ++DFG+ + ++ ++ +T A + ++A E +
Sbjct: 155 FV---HRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 601 EGRVFANGDVYSFGIMLMEI 620
+ DV+SFG++L E+
Sbjct: 212 TQKFTTKSDVWSFGVLLWEL 231
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 428 NENNLIGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH 479
+ + +IGKG FG +Y ++RI ++ ++ +Q AF E +M+ ++
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLR---EGLLMRGLN 80
Query: 480 YRNLVKIIS-SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYL 538
+ N++ +I E ++L +M HG L + + S + ++ + VA +EYL
Sbjct: 81 HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL 140
Query: 539 HFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAP 596
V H DL N +LD++ ++DFG+ + ++ + Q A + + A
Sbjct: 141 AEQKFV---HRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL 197
Query: 597 EYGREGRVFANGDVYSFGIMLMEI 620
E + R DV+SFG++L E+
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWEL 221
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 430 NNLIGKGGFGTIYKSRI----GDGMEVAVKVFH--LQCGRAFKSFDIECEIMKSIHYRNL 483
N +IG+G FG +Y + G + AVK + G F E IMK + N+
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 152
Query: 484 VKIISSCSNEEFKELV-LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+ ++ C E LV L +M HG L + + + + + VA +++L
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 212
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAPEYGR 600
V H DL N +LD+ ++DFG+ + + ++ +T A + ++A E +
Sbjct: 213 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 601 EGRVFANGDVYSFGIMLMEI 620
+ DV+SFG++L E+
Sbjct: 270 TQKFTTKSDVWSFGVLLWEL 289
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 29/224 (12%)
Query: 425 YGFNENNL-----IGKGGFGTIYKSR-IGDGME-----VAVKVF----HLQCGRAFKSFD 469
+ F NNL +G G FG + ++ G G E VAVK+ H A S
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS-- 98
Query: 470 IECEIMKSI-HYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIM 528
E +IM + + N+V ++ +C++ ++ E+ +G L L + +L+ I
Sbjct: 99 -ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 529 IDVASVLEYLHFNFLVP----------VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE 578
S + LHF+ V IH D+ NVLL + VA + DFG+ + ++ +
Sbjct: 158 NSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Query: 579 DQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ + + ++APE + DV+S+GI+L EI S
Sbjct: 218 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 433 IGKGGFGTIYKSRIG------DGMEVAVKVFHLQCGRAFK-SFDIECEIMKSIHYRNLVK 485
+G G FG +Y+ ++ ++VAVK C + F +E I+ +++N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLY---------SSNCILDIFQRLNIMIDVASVLE 536
I + ++LE M G L+ L SS +LD+ L++ D+A +
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 161
Query: 537 YLHFNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGY 593
YL N IH D+ N LL VA + DFG+ + + + + +
Sbjct: 162 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 218
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ PE EG + D +SFG++L EI S
Sbjct: 219 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 427 FNENNLIGKGGFGTIYKSRI----GDGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHY 480
F ++GKG FG++ ++++ G ++VAVK+ + F E MK +
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 481 RNLVKIISSCSNEEFK------ELVLEHMPHGSLEKCLYSSNCILDIFQR-----LNIMI 529
++ K++ K ++L M HG L L +S + F + M+
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 530 DVASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTL 588
D+A +EYL NF IH DL N +L + M ++DFG+++ + D +
Sbjct: 145 DIACGMEYLSSRNF----IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASK 200
Query: 589 ATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQ 625
+ ++A E + + DV++FG+ + EI + Q
Sbjct: 201 LPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQ 237
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 433 IGKGGFGTIYKSRIG------DGMEVAVKVFHLQCGRAFK-SFDIECEIMKSIHYRNLVK 485
+G G FG +Y+ ++ ++VAVK C + F +E I+ +++N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLY---------SSNCILDIFQRLNIMIDVASVLE 536
I + ++LE M G L+ L SS +LD+ L++ D+A +
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 537 YLHFNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGY 593
YL N IH D+ N LL VA + DFG+ + + + + +
Sbjct: 156 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ PE EG + D +SFG++L EI S
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 433 IGKGGFGTIYKSRIG------DGMEVAVKVFHLQCGRAFK-SFDIECEIMKSIHYRNLVK 485
+G G FG +Y+ ++ ++VAVK C + F +E I+ +++N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLY---------SSNCILDIFQRLNIMIDVASVLE 536
I + ++LE M G L+ L SS +LD+ L++ D+A +
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 146
Query: 537 YLHFNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGY 593
YL N IH D+ N LL VA + DFG+ + + + + +
Sbjct: 147 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 203
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ PE EG + D +SFG++L EI S
Sbjct: 204 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 9/195 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNLVKIISSC 490
+G+G +G +YK++ G VA+K L S I E ++K +H+ N+V +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 491 SNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCD 550
+E LV E M L+K L + L Q I I + +L + ++H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 551 LKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG-D 609
LKP N+L++ L+DFG+ + +S T + T+ Y AP+ + ++ D
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 610 VYSFGIMLMEIHSAK 624
++S G + E+ + K
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 433 IGKGGFGTIYKSRIG------DGMEVAVKVFHLQCGRAFK-SFDIECEIMKSIHYRNLVK 485
+G G FG +Y+ ++ ++VAVK C + F +E I+ +++N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLY------SSNCILDIFQRLNIMIDVASVLEYLH 539
I + ++LE M G L+ L S L + L++ D+A +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 540 FNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
N IH D+ N LL VA + DFG+ + + + + ++ P
Sbjct: 158 ENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHS 622
E EG + D +SFG++L EI S
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 9/195 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNLVKIISSC 490
+G+G +G +YK++ G VA+K L S I E ++K +H+ N+V +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 491 SNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCD 550
+E LV E M L+K L + L Q I I + +L + ++H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 551 LKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG-D 609
LKP N+L++ L+DFG+ + +S T + T+ Y AP+ + ++ D
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 610 VYSFGIMLMEIHSAK 624
++S G + E+ + K
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 433 IGKGGFGTIYKSRIG------DGMEVAVKVFHLQCGRAFK-SFDIECEIMKSIHYRNLVK 485
+G G FG +Y+ ++ ++VAVK C + F +E I+ +++N+V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLY---------SSNCILDIFQRLNIMIDVASVLE 536
I + ++LE M G L+ L SS +LD+ L++ D+A +
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 171
Query: 537 YLHFNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGY 593
YL N IH D+ N LL VA + DFG+ + + + + +
Sbjct: 172 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 228
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ PE EG + D +SFG++L EI S
Sbjct: 229 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 433 IGKGGFGTIYKSRIG------DGMEVAVKVFHLQCGRAFK-SFDIECEIMKSIHYRNLVK 485
+G G FG +Y+ ++ ++VAVK C + F +E I+ +++N+V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLY---------SSNCILDIFQRLNIMIDVASVLE 536
I + ++LE M G L+ L SS +LD+ L++ D+A +
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 195
Query: 537 YLHFNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGY 593
YL N IH D+ N LL VA + DFG+ + + + + +
Sbjct: 196 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 252
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ PE EG + D +SFG++L EI S
Sbjct: 253 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 433 IGKGGFGTIYKSRIG------DGMEVAVKVFHLQCGRAFK-SFDIECEIMKSIHYRNLVK 485
+G G FG +Y+ ++ ++VAVK C + F +E I+ +++N+V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLY------SSNCILDIFQRLNIMIDVASVLEYLH 539
I + ++LE M G L+ L S L + L++ D+A +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 540 FNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
N IH D+ N LL VA + DFG+ + + + + ++ P
Sbjct: 176 ENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHS 622
E EG + D +SFG++L EI S
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 430 NNLIGKGGFGTIYKSRI----GDGMEVAVKVFH--LQCGRAFKSFDIECEIMKSIHYRNL 483
N +IG+G FG +Y + G + AVK + G F E IMK + N+
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 98
Query: 484 VKIISSCSNEEFKELV-LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+ ++ C E LV L +M HG L + + + + + VA +++L
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAPEYGR 600
V H DL N +LD+ ++DFG+ + + ++ +T A + ++A E +
Sbjct: 159 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 601 EGRVFANGDVYSFGIMLMEI 620
+ DV+SFG++L E+
Sbjct: 216 TQKFTTKSDVWSFGVLLWEL 235
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 433 IGKGGFGTIYKSRIG------DGMEVAVKVFHLQCGRAFK-SFDIECEIMKSIHYRNLVK 485
+G G FG +Y+ ++ ++VAVK C + F +E I+ +++N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLY---------SSNCILDIFQRLNIMIDVASVLE 536
I + ++LE M G L+ L SS +LD+ L++ D+A +
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 537 YLHFNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGY 593
YL N IH D+ N LL VA + DFG+ + + + + +
Sbjct: 156 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKW 212
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ PE EG + D +SFG++L EI S
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ +++ C +L+++ MP G L + + LN + +A + YL
Sbjct: 78 PHVCRLLGICLTSTV-QLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
LV H DL NVL+ ++DFG+ KLL E++ I ++A E
Sbjct: 137 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 601 EGRVFANGDVYSFGIMLMEI 620
DV+S+G+ + E+
Sbjct: 194 HRIYTHQSDVWSYGVTVWEL 213
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ +++ C +L+++ MP G L + + LN + +A + YL
Sbjct: 81 PHVCRLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
LV H DL NVL+ ++DFG+ KLL E++ I ++A E
Sbjct: 140 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 601 EGRVFANGDVYSFGIMLMEI 620
DV+S+G+ + E+
Sbjct: 197 HRIYTHQSDVWSYGVTVWEL 216
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 430 NNLIGKGGFGTIYKSRI----GDGMEVAVKVFH--LQCGRAFKSFDIECEIMKSIHYRNL 483
N +IG+G FG +Y + G + AVK + G F E IMK + N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 93
Query: 484 VKIISSCSNEEFKELV-LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+ ++ C E LV L +M HG L + + + + + VA +++L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAPEYGR 600
V H DL N +LD+ ++DFG+ + + ++ +T A + ++A E +
Sbjct: 154 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 601 EGRVFANGDVYSFGIMLMEI 620
+ DV+SFG++L E+
Sbjct: 211 TQKFTTKSDVWSFGVLLWEL 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 430 NNLIGKGGFGTIYKSRI----GDGMEVAVKVFH--LQCGRAFKSFDIECEIMKSIHYRNL 483
N +IG+G FG +Y + G + AVK + G F E IMK + N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 94
Query: 484 VKIISSCSNEEFKELV-LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+ ++ C E LV L +M HG L + + + + + VA +++L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAPEYGR 600
V H DL N +LD+ ++DFG+ + + ++ +T A + ++A E +
Sbjct: 155 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 601 EGRVFANGDVYSFGIMLMEI 620
+ DV+SFG++L E+
Sbjct: 212 TQKFTTKSDVWSFGVLLWEL 231
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK 485
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 111
Query: 486 II------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEY 537
+ +E + LVL+++P + S L + M + L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 538 LH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y A
Sbjct: 172 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 224
Query: 596 PEYGREGRVFANG-DVYSFGIMLMEI 620
PE + + DV+S G +L E+
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAEL 250
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+++ MP G C+LD + LN +
Sbjct: 78 PHVCRLLGICLTSTV-QLIMQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 126
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG+ KLL E++
Sbjct: 127 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWEL 213
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 437 GFGTIYKSRIGD----GMEVAVKVFHLQCGRAFKSFDIECEIMKSIH------YRNLVKI 486
G GT K +IG+ G +VAVK+ + Q +S D+ +I + I + +++K+
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILNRQ---KIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 487 ISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPV 546
S +V+E++ G L + + ++ R + + S ++Y H + V
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---V 132
Query: 547 IHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFA 606
+H DLKP NVLLD M A ++DFG++ ++ D +T + + Y APE GR++A
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRT-SCGSPNYAAPEV-ISGRLYA 188
Query: 607 NG--DVYSFGIML 617
D++S G++L
Sbjct: 189 GPEVDIWSCGVIL 201
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 430 NNLIGKGGFGTIYKSRI----GDGMEVAVKVFH--LQCGRAFKSFDIECEIMKSIHYRNL 483
N +IG+G FG +Y + G + AVK + G F E IMK + N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 91
Query: 484 VKIISSCSNEEFKELV-LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+ ++ C E LV L +M HG L + + + + + VA +++L
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 151
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAPEYGR 600
V H DL N +LD+ ++DFG+ + + ++ +T A + ++A E +
Sbjct: 152 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 601 EGRVFANGDVYSFGIMLMEI 620
+ DV+SFG++L E+
Sbjct: 209 TQKFTTKSDVWSFGVLLWEL 228
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 433 IGKGGFGTIYKSRIG------DGMEVAVKVFHLQCGRAFK-SFDIECEIMKSIHYRNLVK 485
+G G FG +Y+ ++ ++VAVK C + F +E I+ +++N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLY---------SSNCILDIFQRLNIMIDVASVLE 536
I + ++LE M G L+ L SS +LD+ L++ D+A +
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 181
Query: 537 YLHFNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGY 593
YL N IH D+ N LL VA + DFG+ + + + + +
Sbjct: 182 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 238
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ PE EG + D +SFG++L EI S
Sbjct: 239 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+++ MP G C+LD + LN +
Sbjct: 79 PHVCRLLGICLTSTV-QLIMQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 127
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG+ KLL E++
Sbjct: 128 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 430 NNLIGKGGFGTIYKSRI----GDGMEVAVKVFH--LQCGRAFKSFDIECEIMKSIHYRNL 483
N +IG+G FG +Y + G + AVK + G F E IMK + N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 93
Query: 484 VKIISSCSNEEFKELV-LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+ ++ C E LV L +M HG L + + + + + VA +++L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT--IGYIAPEYGR 600
V H DL N +LD+ ++DFG+ + + ++ +T A + ++A E +
Sbjct: 154 FV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 601 EGRVFANGDVYSFGIMLMEI 620
+ DV+SFG++L E+
Sbjct: 211 TQKFTTKSDVWSFGVLLWEL 230
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ +++ C +L+++ MP G L + + LN + +A + YL
Sbjct: 80 PHVCRLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
LV H DL NVL+ ++DFG+ KLL E++ I ++A E
Sbjct: 139 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 601 EGRVFANGDVYSFGIMLMEI 620
DV+S+G+ + E+
Sbjct: 196 HRIYTHQSDVWSYGVTVWEL 215
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 30/200 (15%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISS 489
+GKG F + + +I G E A K+ + + R + + E I + + + N+V++ S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 490 CSNEEFKELVLEHMPHGSL-----EKCLYS----SNCILDIFQRLNIMIDVASVLEYLHF 540
S E F LV + + G L + YS S+CI I + +N + H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN----------HCHL 121
Query: 541 NFLVPVIHCDLKPSNVLLDDT---MVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE 597
N ++H DLKP N+LL L+DFG+ + G+ Q+ T GY++PE
Sbjct: 122 N---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW--FGFAGTPGYLSPE 176
Query: 598 YGREGRVFANGDVYSFGIML 617
R+ D+++ G++L
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+++ MP G C+LD + LN +
Sbjct: 77 PHVCRLLGICLTSTV-QLIMQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG+ KLL E++
Sbjct: 126 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+ + MP G C+LD + LN +
Sbjct: 111 PHVCRLLGICLTSTV-QLITQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 159
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG+ KLL E++
Sbjct: 160 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 216
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWEL 246
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 8/189 (4%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
IG+G GT+Y + + G EVA++ +LQ + E +M+ N+V + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
+ +V+E++ GSL + + C +D Q + + LE+LH N VIH ++
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRNI 143
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVY 611
K N+LL L+DFG + E QS T + T ++APE D++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPE-QSKRST-MVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 612 SFGIMLMEI 620
S GIM +E+
Sbjct: 202 SLGIMAIEM 210
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 433 IGKGGFGTIYKSRIG------DGMEVAVKVFHLQCGRAFK-SFDIECEIMKSIHYRNLVK 485
+G G FG +Y+ ++ ++VAVK C + F +E I+ +++N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLY------SSNCILDIFQRLNIMIDVASVLEYLH 539
I + +++E M G L+ L S L + L++ D+A +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 540 FNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
N IH D+ N LL VA + DFG+ + + + + ++ P
Sbjct: 173 ENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHS 622
E EG + D +SFG++L EI S
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK 485
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 89
Query: 486 II------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEY 537
+ +E + LVL+++P + S L + M + L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 538 LH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y A
Sbjct: 150 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 202
Query: 596 PEYGREGRVFANG-DVYSFGIMLMEI 620
PE + + DV+S G +L E+
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAEL 228
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK 485
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 89
Query: 486 II------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEY 537
+ +E + LVL+++P + S L + M + L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 538 LH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y A
Sbjct: 150 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 202
Query: 596 PEYGREGRVFANG-DVYSFGIMLMEI 620
PE + + DV+S G +L E+
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAEL 228
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 426 GFNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLV 484
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 76
Query: 485 KII------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLE 536
++ +E + LVL+++P + S L + M + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 537 YLH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYI 594
Y+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 189
Query: 595 APEYGREGRVFANG-DVYSFGIMLMEI 620
APE + + DV+S G +L E+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 426 GFNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLV 484
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 95
Query: 485 KII------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLE 536
++ +E + LVL+++P + S L + M + L
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 537 YLH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYI 594
Y+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y
Sbjct: 156 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 208
Query: 595 APEYGREGRVFANG-DVYSFGIMLMEI 620
APE + + DV+S G +L E+
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAEL 235
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 426 GFNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLV 484
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 84
Query: 485 KII------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLE 536
++ +E + LVL+++P + S L + M + L
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 537 YLH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYI 594
Y+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y
Sbjct: 145 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 197
Query: 595 APEYGREGRVFANG-DVYSFGIMLMEI 620
APE + + DV+S G +L E+
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAEL 224
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 433 IGKGGFGTIYKSRIG------DGMEVAVKVFHLQCGRAFK-SFDIECEIMKSIHYRNLVK 485
+G G FG +Y+ ++ ++VAVK C + F +E I+ +++N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLY---------SSNCILDIFQRLNIMIDVASVLE 536
I + +++E M G L+ L SS +LD+ L++ D+A +
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 537 YLHFNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGY 593
YL N IH D+ N LL VA + DFG+ + + + + +
Sbjct: 155 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ PE EG + D +SFG++L EI S
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 426 GFNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLV 484
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 77
Query: 485 KII------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLE 536
++ +E + LVL+++P + S L + M + L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 537 YLH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYI 594
Y+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y
Sbjct: 138 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 190
Query: 595 APEYGREGRVFANG-DVYSFGIMLMEI 620
APE + + DV+S G +L E+
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAEL 217
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 426 GFNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLV 484
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 76
Query: 485 KII------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLE 536
++ +E + LVL+++P + S L + M + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 537 YLH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYI 594
Y+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 189
Query: 595 APEYGREGRVFANG-DVYSFGIMLMEI 620
APE + + DV+S G +L E+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK 485
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V+
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 115
Query: 486 II------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEY 537
+ +E + LVL+++P + S L + M + L Y
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 538 LH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y A
Sbjct: 176 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 228
Query: 596 PEYGREGRVFANG-DVYSFGIMLMEI 620
PE + + DV+S G +L E+
Sbjct: 229 PELIFGATDYTSSIDVWSAGCVLAEL 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK 485
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V+
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 113
Query: 486 II------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEY 537
+ +E + LVL+++P + S L + M + L Y
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 538 LH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y A
Sbjct: 174 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 226
Query: 596 PEYGREGRVFANG-DVYSFGIMLMEI 620
PE + + DV+S G +L E+
Sbjct: 227 PELIFGATDYTSSIDVWSAGCVLAEL 252
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 25/207 (12%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK 485
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 111
Query: 486 II------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEY 537
+ +E + LVL+++P + S L + M + L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 538 LH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y A
Sbjct: 172 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 224
Query: 596 PE--YGREGRVFANGDVYSFGIMLMEI 620
PE +G ++ DV+S G +L E+
Sbjct: 225 PELIFGATDYT-SSIDVWSAGCVLAEL 250
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 8/193 (4%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G +G++YK+ G VA+K ++ + E IM+ ++VK S
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
+V+E+ GS+ + N L + I+ LEYLHF + IH D+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDI 151
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVY 611
K N+LL+ A L+DFG+ L D + + T ++APE +E D++
Sbjct: 152 KAGNILLNTEGHAKLADFGVAGQLT--DXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIW 209
Query: 612 SFGIMLMEIHSAK 624
S GI +E+ K
Sbjct: 210 SLGITAIEMAEGK 222
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK 485
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V+
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 82
Query: 486 II------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEY 537
+ +E + LVL+++P + S L + M + L Y
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 538 LH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y A
Sbjct: 143 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 195
Query: 596 PEYGREGRVFANG-DVYSFGIMLMEI 620
PE + + DV+S G +L E+
Sbjct: 196 PELIFGATDYTSSIDVWSAGCVLAEL 221
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK 485
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V+
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 105
Query: 486 II------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEY 537
+ +E + LVL+++P + S L + M + L Y
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 538 LH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y A
Sbjct: 166 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 218
Query: 596 PEYGREGRVFANG-DVYSFGIMLMEI 620
PE + + DV+S G +L E+
Sbjct: 219 PELIFGATDYTSSIDVWSAGCVLAEL 244
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK 485
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V+
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 156
Query: 486 II------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEY 537
+ +E + LVL+++P + S L + M + L Y
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 538 LH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y A
Sbjct: 217 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRA 269
Query: 596 PEYGREGRVFANG-DVYSFGIMLMEI 620
PE + + DV+S G +L E+
Sbjct: 270 PELIFGATDYTSSIDVWSAGCVLAEL 295
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK 485
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V+
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 81
Query: 486 II------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEY 537
+ +E + LVL+++P + S L + M + L Y
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 538 LH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y A
Sbjct: 142 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 194
Query: 596 PEYGREGRVFANG-DVYSFGIMLMEI 620
PE + + DV+S G +L E+
Sbjct: 195 PELIFGATDYTSSIDVWSAGCVLAEL 220
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 30/200 (15%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISS 489
+GKG F + + +I G E A K+ + + R + + E I + + + N+V++ S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 490 CSNEEFKELVLEHMPHGSL-----EKCLYS----SNCILDIFQRLNIMIDVASVLEYLHF 540
S E F LV + + G L + YS S+CI I + +N + H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN----------HCHL 121
Query: 541 NFLVPVIHCDLKPSNVLLDDT---MVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE 597
N ++H DLKP N+LL L+DFG+ + G+ Q+ T GY++PE
Sbjct: 122 N---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPE 176
Query: 598 YGREGRVFANGDVYSFGIML 617
R+ D+++ G++L
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 426 GFNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLV 484
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 89
Query: 485 KII------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLE 536
++ +E + LVL+++P + S L + M + L
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 537 YLH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYI 594
Y+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y
Sbjct: 150 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 202
Query: 595 APEYGREGRVFANG-DVYSFGIMLMEI 620
APE + + DV+S G +L E+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAEL 229
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 426 GFNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLV 484
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 76
Query: 485 KII------SSCSNEEFKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLE 536
++ +E + LVL+++P + S L + M + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 537 YLH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYI 594
Y+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 189
Query: 595 APEYGREGRVFANG-DVYSFGIMLMEI 620
APE + + DV+S G +L E+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRNLVKIIS 488
IGKG F + +R I G EVAVK+ L K F E IMK +++ N+VK+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 73
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
E+ LV+E+ G + L + + + R + S ++Y H F+V H
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQKFIV---H 129
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATI----GYIAPEYGREGRV 604
DLK N+LLD M ++DFG + T L T Y APE +G+
Sbjct: 130 RDLKAENLLLDADMNIKIADFGFS-------NEFTFGNKLDTFCGSPPYAAPELF-QGKK 181
Query: 605 F--ANGDVYSFGIMLMEIHSA 623
+ DV+S G++L + S
Sbjct: 182 YDGPEVDVWSLGVILYTLVSG 202
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 10/200 (5%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ +++ C +L+ + MP G L + + LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTV-QLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
LV H DL NVL+ ++DFG+ KLL E++ I ++A E
Sbjct: 136 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 601 EGRVFANGDVYSFGIMLMEI 620
DV+S+G+ + E+
Sbjct: 193 HRIYTHQSDVWSYGVTVWEL 212
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 10/200 (5%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ +++ C +L+ + MP G L + + LN + +A + YL
Sbjct: 80 PHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
LV H DL NVL+ ++DFG+ KLL E++ I ++A E
Sbjct: 139 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 601 EGRVFANGDVYSFGIMLMEI 620
DV+S+G+ + E+
Sbjct: 196 HRIYTHQSDVWSYGVTVWEL 215
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+ + MP G C+LD + LN +
Sbjct: 79 PHVCRLLGICLTSTV-QLITQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 127
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG+ KLL E++
Sbjct: 128 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+ + MP G C+LD + LN +
Sbjct: 77 PHVCRLLGICLTSTV-QLITQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG+ KLL E++
Sbjct: 126 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 18/208 (8%)
Query: 426 GFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK 485
+ +IG G FG ++++++ + EVA+K LQ R FK + E +IM+ + + N+V
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKV-LQDKR-FK--NRELQIMRIVKHPNVVD 96
Query: 486 IIS------SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+ + +E F LVLE++P + + + L I + + +L L
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAK-LKQTMPMLLIKLYMYQLLRSLA 155
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE- 597
+ + + H D+KP N+LLD + V L DFG K+LI + +++ + + Y APE
Sbjct: 156 YIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS---XICSRYYRAPEL 212
Query: 598 -YGREGRVFANGDVYSFGIMLMEIHSAK 624
+G N D++S G ++ E+ +
Sbjct: 213 IFGATNYT-TNIDIWSTGCVMAELMQGQ 239
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+ + MP G C+LD + LN +
Sbjct: 77 PHVCRLLGICLTSTV-QLITQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG+ KLL E++
Sbjct: 126 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 10/200 (5%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ +++ C +L+ + MP G L + + LN + +A + YL
Sbjct: 80 PHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
LV H DL NVL+ ++DFG+ KLL E++ I ++A E
Sbjct: 139 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 601 EGRVFANGDVYSFGIMLMEI 620
DV+S+G+ + E+
Sbjct: 196 HRIYTHQSDVWSYGVTVWEL 215
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 115/270 (42%), Gaps = 56/270 (20%)
Query: 433 IGKGGFGTIYKSRI-----GDGME-VAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLV- 484
+G+ FG +YK + G+ + VA+K + G + F E + + + N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 485 ------------KIISSCSNEEFKELVLEHMPHGSL-----EKCLYSSNCILDIFQRLNI 527
I S CS+ + E ++ PH + ++ + S+ L+ +++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA---LEPPDFVHL 150
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
+ +A+ +EYL + V+H DL NVL+ D + +SD G+ + + D +
Sbjct: 151 VAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 207
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQ--------------------- 626
L I ++APE G+ + D++S+G++L E+ S Q
Sbjct: 208 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP 267
Query: 627 ----CVSFVFNLAMECTIESLELRINAKEI 652
C ++V+ L +EC E R K+I
Sbjct: 268 CPDDCPAWVYALMIECWNEFPSRRPRFKDI 297
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+ + MP G C+LD + LN +
Sbjct: 80 PHVCRLLGICLTSTV-QLITQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 128
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG+ KLL E++
Sbjct: 129 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWEL 215
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 23/207 (11%)
Query: 426 GFNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLV 484
+ + +IG G FG +Y++++ D E VA+K LQ R FK + E +IM+ + + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIV 76
Query: 485 KI----ISSCSNEE--FKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLE 536
++ SS ++ + LVL+++P + S L + M + L
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 537 YLH-FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYI 594
Y+H F + H D+KP N+LLD DT V L DFG K L+ + +++ + + Y
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 189
Query: 595 APEYGREGRVFANG-DVYSFGIMLMEI 620
APE + + DV+S G +L E+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+ + MP G C+LD + LN +
Sbjct: 87 PHVCRLLGICLTSTV-QLITQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 135
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG+ KLL E++
Sbjct: 136 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 192
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWEL 222
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+ + MP G C+LD + LN +
Sbjct: 83 PHVCRLLGICLTSTV-QLITQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 131
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG+ KLL E++
Sbjct: 132 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 188
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWEL 218
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 115/270 (42%), Gaps = 56/270 (20%)
Query: 433 IGKGGFGTIYKSRI-----GDGME-VAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLV- 484
+G+ FG +YK + G+ + VA+K + G + F E + + + N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 485 ------------KIISSCSNEEFKELVLEHMPHGSL-----EKCLYSSNCILDIFQRLNI 527
I S CS+ + E ++ PH + ++ + S+ L+ +++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA---LEPPDFVHL 133
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
+ +A+ +EYL + V+H DL NVL+ D + +SD G+ + + D +
Sbjct: 134 VAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 190
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQ--------------------- 626
L I ++APE G+ + D++S+G++L E+ S Q
Sbjct: 191 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP 250
Query: 627 ----CVSFVFNLAMECTIESLELRINAKEI 652
C ++V+ L +EC E R K+I
Sbjct: 251 CPDDCPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 10/200 (5%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ +++ C +L+ + MP G L + + LN + +A + YL
Sbjct: 84 PHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
LV H DL NVL+ ++DFG+ KLL E++ I ++A E
Sbjct: 143 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 601 EGRVFANGDVYSFGIMLMEI 620
DV+S+G+ + E+
Sbjct: 200 HRIYTHQSDVWSYGVTVWEL 219
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 10/200 (5%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ +++ C +L+ + MP G L + + LN + +A + YL
Sbjct: 102 PHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 160
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
LV H DL NVL+ ++DFG+ KLL E++ I ++A E
Sbjct: 161 RRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 217
Query: 601 EGRVFANGDVYSFGIMLMEI 620
DV+S+G+ + E+
Sbjct: 218 HRIYTHQSDVWSYGVTVWEL 237
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 11/197 (5%)
Query: 427 FNENNLIGKGGFGTIYK-SRIGDGMEVAVKVFHLQCGRAFKSFDI-ECEIMKSIHYRNLV 484
F + + +G G G ++K S G+ +A K+ HL+ A ++ I E +++ + +V
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD-IFQRLNIMIDVASVLEYLHFNFL 543
+ ++ + +EHM GSL++ L + I + I +++I V L YL
Sbjct: 71 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKH- 127
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
++H D+KPSN+L++ L DFG++ LI E + + T Y++PE +
Sbjct: 128 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRSYMSPERLQGTH 182
Query: 604 VFANGDVYSFGIMLMEI 620
D++S G+ L+E+
Sbjct: 183 YSVQSDIWSMGLSLVEM 199
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+++ MP G C+LD + LN +
Sbjct: 81 PHVCRLLGICLTSTV-QLIMQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 129
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG KLL E++
Sbjct: 130 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 186
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWEL 216
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 420 VCRATYGFNENNLIGKGGFGTIYKSR--IGDGMEVAVKVFHLQCGRAFKSFDIECEI--- 474
+CRA + IG+G +G ++K+R G VA+K +Q G E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 475 --MKSIHYRNLVKIISSCS----NEEFK-ELVLEHMPHG---SLEKCLYSSNCILDIFQR 524
+++ + N+V++ C+ + E K LV EH+ L+K I
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI--- 122
Query: 525 LNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQ 584
++M + L++LH + V+H DLKP N+L+ + L+DFG+ ++ + M
Sbjct: 123 KDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MAL 176
Query: 585 TQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAK 624
T + T+ Y APE + D++S G + E+ K
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 25/214 (11%)
Query: 415 FSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEV-AVKVFHLQ-CGRAFKSFDI-- 470
F + E+ RA IGKG FG + + D ++ A+K + Q C + ++
Sbjct: 14 FDHFEILRA---------IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMID 530
E +IM+ + + LV + S +EE +V++ + G L L + + +L + +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-FICE 123
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA- 589
+ L+YL +IH D+KP N+LLD+ H++DF I +L E TQ T+A
Sbjct: 124 LVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE----TQITTMAG 176
Query: 590 TIGYIAPEY--GREGRVFANG-DVYSFGIMLMEI 620
T Y+APE R+G ++ D +S G+ E+
Sbjct: 177 TKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYEL 210
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+++ MP G C+LD + LN +
Sbjct: 79 PHVCRLLGICLTSTV-QLIMQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 127
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG KLL E++
Sbjct: 128 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 23/195 (11%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRNLVKIIS 488
IGKG F + +R I G EVAVK+ L K F E IMK +++ N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
E+ LV+E+ G + L + + + R + S ++Y H F ++H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATI----GYIAPEYGREGRV 604
DLK N+LLD M ++DFG + T L T Y APE +G+
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFS-------NEFTFGNKLDTFCGSPPYAAPELF-QGKK 188
Query: 605 F--ANGDVYSFGIML 617
+ DV+S G++L
Sbjct: 189 YDGPEVDVWSLGVIL 203
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+++ MP G C+LD + LN +
Sbjct: 79 PHVCRLLGICLTSTV-QLIMQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 127
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG KLL E++
Sbjct: 128 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+ + MP G C+LD + LN +
Sbjct: 71 PHVCRLLGICLTSTV-QLITQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 119
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG+ KLL E++
Sbjct: 120 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWEL 206
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 89/195 (45%), Gaps = 23/195 (11%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRNLVKIIS 488
IGKG F + +R I G EVAVK+ L K F E IMK +++ N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
E+ LV+E+ G + L + + + R + S ++Y H F+V H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKFIV---H 136
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATI----GYIAPEYGREGRV 604
DLK N+LLD M ++DFG + T L T Y APE +G+
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFS-------NEFTFGNKLDTFCGSPPYAAPELF-QGKK 188
Query: 605 F--ANGDVYSFGIML 617
+ DV+S G++L
Sbjct: 189 YDGPEVDVWSLGVIL 203
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 31/205 (15%)
Query: 427 FNENNLIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGR--------AFKSFDIECEIMKS 477
++ ++IG+G + + G E AVK+ + R ++ E I++
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 478 IH-YRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLE 536
+ + +++ +I S + F LV + M G L L + L + +IM + +
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAVS 214
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGIT-KLLIGEDQSMTQTQTLATIGYIA 595
+LH N ++H DLKP N+LLDD M LSDFG + L GE + T GY+A
Sbjct: 215 FLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE----KLRELCGTPGYLA 267
Query: 596 PE------------YGREGRVFANG 608
PE YG+E ++A G
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACG 292
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+ + MP G C+LD + LN +
Sbjct: 74 PHVCRLLGICLTSTV-QLITQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 122
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG+ KLL E++
Sbjct: 123 IAEGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWEL 209
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 431 NLIGKGGFGTIYKS-RIGDG----MEVAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLV 484
++G G FGT+YK I DG + VA+KV +A K E +M + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
+++ C +LV + MP+G L + + L LN + +A + YL V
Sbjct: 83 RLLGICLTSTV-QLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED---V 138
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
++H DL NVL+ ++DFG+ +LL ++ I ++A E R
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRF 198
Query: 605 FANGDVYSFGIMLMEIHS 622
DV+S+G+ + E+ +
Sbjct: 199 THQSDVWSYGVTVWELMT 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 420 VCRATYGFNENNLIGKGGFGTIYKSR--IGDGMEVAVKVFHLQCGRAFKSFDIECEI--- 474
+CRA + IG+G +G ++K+R G VA+K +Q G E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 475 --MKSIHYRNLVKIISSCS----NEEFK-ELVLEHMPHG---SLEKCLYSSNCILDIFQR 524
+++ + N+V++ C+ + E K LV EH+ L+K I
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI--- 122
Query: 525 LNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQ 584
++M + L++LH + V+H DLKP N+L+ + L+DFG+ ++ + M
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MAL 176
Query: 585 TQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAK 624
T + T+ Y APE + D++S G + E+ K
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 23/193 (11%)
Query: 437 GFGTIYKSRIGD----GMEVAVKVFHLQCGRAFKSFDIECEIMKSIH------YRNLVKI 486
G GT K +IG+ G +VAVK+ + Q +S D+ +I + I + +++K+
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILNRQ---KIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 487 ISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPV 546
S +V+E++ G L + + ++ R + + S ++Y H + V
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---V 132
Query: 547 IHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFA 606
+H DLKP NVLLD M A ++DFG++ ++ D + + + Y APE GR++A
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLR-DSCGSPNYAAPEV-ISGRLYA 188
Query: 607 NG--DVYSFGIML 617
D++S G++L
Sbjct: 189 GPEVDIWSCGVIL 201
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 433 IGKGGFGTI----YKSRIGDGMEVAVKVFHLQCGRA-FKSFDIECEIMKSIHYRNLVKII 487
+G G FG++ Y+ R ++VA+KV +A + E +IM + +V++I
Sbjct: 18 LGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH-FNFLVPV 546
C E LV+E G L K L + + ++ V+ ++YL NF
Sbjct: 77 GVCQAEALM-LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF---- 131
Query: 547 IHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMT-QTQTLATIGYIAPEYGREGRVF 605
+H DL NVLL + A +SDFG++K L +D T ++ + + APE +
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 606 ANGDVYSFGIMLMEIHSAKQQ 626
+ DV+S+G+ + E S Q+
Sbjct: 192 SRSDVWSYGVTMWEALSYGQK 212
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 420 VCRATYGFNENNLIGKGGFGTIYKSR--IGDGMEVAVKVFHLQCGRAFKSFDIECEI--- 474
+CRA + IG+G +G ++K+R G VA+K +Q G E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 475 --MKSIHYRNLVKIISSCS----NEEFK-ELVLEHMPHG---SLEKCLYSSNCILDIFQR 524
+++ + N+V++ C+ + E K LV EH+ L+K I
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI--- 122
Query: 525 LNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQ 584
++M + L++LH + V+H DLKP N+L+ + L+DFG+ ++ + M
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MAL 176
Query: 585 TQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAK 624
T + T+ Y APE + D++S G + E+ K
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 427 FNENNLIGKGGFGTIYK-SRIGDGMEVAVKVFHLQCGRAFKSFDI-ECEIMKSIHYRNLV 484
F + + +G G G ++K S G+ +A K+ HL+ A ++ I E +++ + +V
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD-IFQRLNIMIDVASVLEYLHFNFL 543
+ ++ + +EHM GSL++ L + I + I +++I V L YL
Sbjct: 130 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKH- 186
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
++H D+KPSN+L++ L DFG++ LI SM + + T Y++PE +
Sbjct: 187 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTH 241
Query: 604 VFANGDVYSFGIMLMEI 620
D++S G+ L+E+
Sbjct: 242 YSVQSDIWSMGLSLVEM 258
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 33/222 (14%)
Query: 431 NLIGKGGFGTIYK------SRIGDGMEVAVKVFHLQCGRAFK-SFDIECEIMKSI-HYRN 482
++G G FG + S+ G ++VAVK+ + + + + E ++M + + N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSL-------------EKCLYSSNCILDIFQRLNIMI 529
+V ++ +C+ L+ E+ +G L ++ Y + L+ + LN++
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 530 ---------DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580
VA +E+L F +H DL NVL+ V + DFG+ + ++ +
Sbjct: 171 FEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 581 SMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ + + ++APE EG DV+S+GI+L EI S
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRNLVKIIS 488
IGKG F + +R I G EVAVK+ L K F E IMK +++ N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
E+ LV+E+ G + L + + + R + S ++Y H F+V H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKFIV---H 136
Query: 549 CDLKPSNVLLDDTMVAHLSDFGIT 572
DLK N+LLD M ++DFG +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 23/195 (11%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRNLVKIIS 488
IGKG F + +R I G EVAV++ L K F E IMK +++ N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
E+ LV+E+ G + L + + + R + S ++Y H F ++H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATI----GYIAPEYGREGRV 604
DLK N+LLD M ++DFG + T L T Y APE +G+
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFS-------NEFTFGNKLDTFCGSPPYAAPELF-QGKK 188
Query: 605 F--ANGDVYSFGIML 617
+ DV+S G++L
Sbjct: 189 YDGPEVDVWSLGVIL 203
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISS 489
IGKG F + + ++ G E A K+ + + R + + E I + + + N+V++ S
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
S E F LV + + G L + + + + + +LE + + V+H
Sbjct: 72 ISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHR 127
Query: 550 DLKPSNVLLDDT---MVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFA 606
DLKP N+LL L+DFG+ + G+ Q+ T GY++PE R+
Sbjct: 128 DLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAW--FGFAGTPGYLSPEVLRKEAYGK 185
Query: 607 NGDVYSFGIML 617
D+++ G++L
Sbjct: 186 PVDIWACGVIL 196
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 23/193 (11%)
Query: 437 GFGTIYKSRIGD----GMEVAVKVFHLQCGRAFKSFDIECEIMKSIH------YRNLVKI 486
G GT K ++G G +VAVK+ + Q +S D+ +I + I + +++K+
Sbjct: 25 GVGTFGKVKVGKHELTGHKVAVKILNRQ---KIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 487 ISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPV 546
S +V+E++ G L + N LD + + + S ++Y H + V
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHM---V 137
Query: 547 IHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFA 606
+H DLKP NVLLD M A ++DFG++ ++ D + + + Y APE GR++A
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRX-SCGSPNYAAPEVI-SGRLYA 193
Query: 607 NG--DVYSFGIML 617
D++S G++L
Sbjct: 194 GPEVDIWSSGVIL 206
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++ G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+++ MP G C+LD + LN +
Sbjct: 84 PHVCRLLGICLTSTV-QLIMQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 132
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG+ KLL E++
Sbjct: 133 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWEL 219
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMID 530
E +M+ + +V++I C E + LV+E G L K L + + D + ++
Sbjct: 420 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 477
Query: 531 VASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG-EDQSMTQTQTL 588
V+ ++YL NF +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 478 VSMGMKYLEESNF----VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 533
Query: 589 ATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
+ + APE + + DV+SFG+++ E S Q+
Sbjct: 534 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 571
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 427 FNENNLIGKGGFGTIYK-SRIGDGMEVAVKVFHLQCGRAFKSFDI-ECEIMKSIHYRNLV 484
F + + +G G G ++K S G+ +A K+ HL+ A ++ I E +++ + +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD-IFQRLNIMIDVASVLEYLHFNFL 543
+ ++ + +EHM GSL++ L + I + I +++I V L YL
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKH- 124
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
++H D+KPSN+L++ L DFG++ LI SM + + T Y++PE +
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTH 179
Query: 604 VFANGDVYSFGIMLMEI 620
D++S G+ L+E+
Sbjct: 180 YSVQSDIWSMGLSLVEM 196
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+ + MP G C+LD + LN +
Sbjct: 79 PHVCRLLGICLTSTV-QLITQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 127
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG KLL E++
Sbjct: 128 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G + K L D + + ++A+ L Y H VIH
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 136
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T T+ Y+ PE EGR+
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI-EGRMHDEK 191
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 192 VDLWSLGVLCYEF 204
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMID 530
E +M+ + +V++I C E + LV+E G L K L + + D + ++
Sbjct: 421 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 478
Query: 531 VASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG-EDQSMTQTQTL 588
V+ ++YL NF +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 479 VSMGMKYLEESNF----VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 534
Query: 589 ATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
+ + APE + + DV+SFG+++ E S Q+
Sbjct: 535 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 572
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMID 530
E +M+ + +V++I C E + LV+E G L K L + + D + ++
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 119
Query: 531 VASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG-EDQSMTQTQTL 588
V+ ++YL NF +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 120 VSMGMKYLEESNF----VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGK 175
Query: 589 ATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
+ + APE + + DV+SFG+++ E S Q+
Sbjct: 176 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 213
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 10/200 (5%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ +++ C +L+ + MP G L + + LN + +A + YL
Sbjct: 84 PHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
LV H DL NVL+ ++DFG KLL E++ I ++A E
Sbjct: 143 RRLV---HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 601 EGRVFANGDVYSFGIMLMEI 620
DV+S+G+ + E+
Sbjct: 200 HRIYTHQSDVWSYGVTVWEL 219
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 427 FNENNLIGKGGFGTIYK-SRIGDGMEVAVKVFHLQCGRAFKSFDI-ECEIMKSIHYRNLV 484
F + + +G G G ++K S G+ +A K+ HL+ A ++ I E +++ + +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD-IFQRLNIMIDVASVLEYLHFNFL 543
+ ++ + +EHM GSL++ L + I + I +++I V L YL
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKH- 124
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
++H D+KPSN+L++ L DFG++ LI SM + + T Y++PE +
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTH 179
Query: 604 VFANGDVYSFGIMLMEI 620
D++S G+ L+E+
Sbjct: 180 YSVQSDIWSMGLSLVEM 196
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 433 IGKGGFGTIYKSRIG------DGMEVAVKVF-HLQCGRAFKSFDIECEIMKSIHYRNLVK 485
+G G FG +Y+ ++ ++VAVK + + F +E I+ +++N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLY------SSNCILDIFQRLNIMIDVASVLEYLH 539
I + ++LE M G L+ L S L + L++ D+A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 540 FNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
N IH D+ N LL VA + DFG+ + + + + ++ P
Sbjct: 173 ENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 597 EYGREGRVFANGDVYSFGIMLMEIHS 622
E EG + D +SFG++L EI S
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 427 FNENNLIGKGGFGTIYK-SRIGDGMEVAVKVFHLQCGRAFKSFDI-ECEIMKSIHYRNLV 484
F + + +G G G ++K S G+ +A K+ HL+ A ++ I E +++ + +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD-IFQRLNIMIDVASVLEYLHFNFL 543
+ ++ + +EHM GSL++ L + I + I +++I V L YL
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKH- 124
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
++H D+KPSN+L++ L DFG++ LI SM + + T Y++PE +
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTH 179
Query: 604 VFANGDVYSFGIMLMEI 620
D++S G+ L+E+
Sbjct: 180 YSVQSDIWSMGLSLVEM 196
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++G G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+ + MP G C+LD + LN +
Sbjct: 77 PHVCRLLGICLTSTV-QLITQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG KLL E++
Sbjct: 126 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 182
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 15/191 (7%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRNLVKIIS 488
IGKG F + +R I G EVAV++ L K F E IMK +++ N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
E+ LV+E+ G + L + + + R + S ++Y H F+V H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKFIV---H 136
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVF--A 606
DLK N+LLD M ++DFG + ++ + + Y APE +G+ +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAAPELF-QGKKYDGP 192
Query: 607 NGDVYSFGIML 617
DV+S G++L
Sbjct: 193 EVDVWSLGVIL 203
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSKR---VIH 131
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T+ T+ Y+ PE EGR+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTELCGTLDYLPPEMI-EGRMHDEK 186
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 187 VDLWSLGVLCYEF 199
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 427 FNENNLIGKGGFGTIYK-SRIGDGMEVAVKVFHLQCGRAFKSFDI-ECEIMKSIHYRNLV 484
F + + +G G G ++K S G+ +A K+ HL+ A ++ I E +++ + +V
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD-IFQRLNIMIDVASVLEYLHFNFL 543
+ ++ + +EHM GSL++ L + I + I +++I V L YL
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKH- 151
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
++H D+KPSN+L++ L DFG++ LI SM + + T Y++PE +
Sbjct: 152 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTH 206
Query: 604 VFANGDVYSFGIMLMEI 620
D++S G+ L+E+
Sbjct: 207 YSVQSDIWSMGLSLVEM 223
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMID 530
E +M+ + +V++I C E + LV+E G L K L + + D + ++
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 119
Query: 531 VASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG-EDQSMTQTQTL 588
V+ ++YL NF +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 120 VSMGMKYLEESNF----VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 175
Query: 589 ATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
+ + APE + + DV+SFG+++ E S Q+
Sbjct: 176 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 213
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 432 LIGKGGFGTIYKSRIGD-GMEVAVKVF-HLQCGRAFKSFDI-ECEIMKSIHYRNLVKIIS 488
L+G+G +G + K R D G VA+K F + K + E +++K + + NLV ++
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 489 SCSNEEFKELVLEHMPHGSLEKC-LYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
C ++ LV E + H L+ L+ + + Q+ + + + + + H + +I
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKY--LFQIINGIGFCHSH---NII 146
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE-------YGR 600
H D+KP N+L+ + V L DFG + L + +AT Y APE YG+
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAPELLVGDVKYGK 204
Query: 601 EGRVFANG 608
V+A G
Sbjct: 205 AVDVWAIG 212
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 427 FNENNLIGKGGFGTIYK-SRIGDGMEVAVKVFHLQCGRAFKSFDI-ECEIMKSIHYRNLV 484
F + + +G G G ++K S G+ +A K+ HL+ A ++ I E +++ + +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD-IFQRLNIMIDVASVLEYLHFNFL 543
+ ++ + +EHM GSL++ L + I + I +++I V L YL
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKH- 124
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
++H D+KPSN+L++ L DFG++ LI SM + + T Y++PE +
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTH 179
Query: 604 VFANGDVYSFGIMLMEI 620
D++S G+ L+E+
Sbjct: 180 YSVQSDIWSMGLSLVEM 196
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 427 FNENNLIGKGGFGTIYK-SRIGDGMEVAVKVFHLQCGRAFKSFDI-ECEIMKSIHYRNLV 484
F + + +G G G ++K S G+ +A K+ HL+ A ++ I E +++ + +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD-IFQRLNIMIDVASVLEYLHFNFL 543
+ ++ + +EHM GSL++ L + I + I +++I V L YL
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKH- 124
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
++H D+KPSN+L++ L DFG++ LI SM + + T Y++PE +
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTH 179
Query: 604 VFANGDVYSFGIMLMEI 620
D++S G+ L+E+
Sbjct: 180 YSVQSDIWSMGLSLVEM 196
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMID 530
E +M+ + +V++I C E + LV+E G L K L + + D + ++
Sbjct: 76 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 133
Query: 531 VASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG-EDQSMTQTQTL 588
V+ ++YL NF +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 134 VSMGMKYLEESNF----VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 189
Query: 589 ATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
+ + APE + + DV+SFG+++ E S Q+
Sbjct: 190 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 227
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYR--NLVKIISS- 489
IGKG FG +++ + G EVAVK+F R +S+ E EI +++ R N++ I++
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 490 -CSNEEFKELVL--EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL--- 543
N + +L L ++ HGSL Y + + + + + + AS L +LH +
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 544 -VPVI-HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA------TIGYIA 595
P I H DLK N+L+ ++D G L + D S T T +A T Y+A
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLG---LAVRHD-SATDTIDIAPNHRVGTKRYMA 206
Query: 596 PEY------GREGRVFANGDVYSFGIMLMEI 620
PE + F D+Y+ G++ EI
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMID 530
E +M+ + +V++I C E + LV+E G L K L + + D + ++
Sbjct: 56 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 113
Query: 531 VASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG-EDQSMTQTQTL 588
V+ ++YL NF +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 114 VSMGMKYLEESNF----VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 169
Query: 589 ATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
+ + APE + + DV+SFG+++ E S Q+
Sbjct: 170 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 207
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 433 IGKGGFGTI----YKSRIGDGMEVAVKVFHLQCGRA-FKSFDIECEIMKSIHYRNLVKII 487
+G G FG++ Y+ R ++VA+KV +A + E +IM + +V++I
Sbjct: 344 LGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH-FNFLVPV 546
C E LV+E G L K L + + ++ V+ ++YL NF
Sbjct: 403 GVCQAEALM-LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF---- 457
Query: 547 IHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMT-QTQTLATIGYIAPEYGREGRVF 605
+H +L NVLL + A +SDFG++K L +D T ++ + + APE +
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 606 ANGDVYSFGIMLMEIHSAKQQ 626
+ DV+S+G+ + E S Q+
Sbjct: 518 SRSDVWSYGVTMWEALSYGQK 538
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMID 530
E +M+ + +V++I C E + LV+E G L K L + + D + ++
Sbjct: 58 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 115
Query: 531 VASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG-EDQSMTQTQTL 588
V+ ++YL NF +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 116 VSMGMKYLEESNF----VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171
Query: 589 ATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
+ + APE + + DV+SFG+++ E S Q+
Sbjct: 172 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 209
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYR--NLVKIISS- 489
IGKG FG +++ + G EVAVK+F R +S+ E EI +++ R N++ I++
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 490 -CSNEEFKELVL--EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL--- 543
N + +L L ++ HGSL Y + + + + + + AS L +LH +
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 544 -VPVI-HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA------TIGYIA 595
P I H DLK N+L+ ++D G L + D S T T +A T Y+A
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLG---LAVRHD-SATDTIDIAPNHRVGTKRYMA 219
Query: 596 PEY------GREGRVFANGDVYSFGIMLMEI 620
PE + F D+Y+ G++ EI
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMID 530
E +M+ + +V++I C E + LV+E G L K L + + D + ++
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 135
Query: 531 VASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG-EDQSMTQTQTL 588
V+ ++YL NF +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 136 VSMGMKYLEESNF----VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 589 ATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
+ + APE + + DV+SFG+++ E S Q+
Sbjct: 192 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMID 530
E +M+ + +V++I C E + LV+E G L K L + + D + ++
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 135
Query: 531 VASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG-EDQSMTQTQTL 588
V+ ++YL NF +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 136 VSMGMKYLEESNF----VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 589 ATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
+ + APE + + DV+SFG+++ E S Q+
Sbjct: 192 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 24/249 (9%)
Query: 422 RATYGFNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQ-CGRAFKSFDIECEIMKSIH 479
R Y E +IG G + + E VA+K +L+ C + E + M H
Sbjct: 9 RDDYELQE--VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 66
Query: 480 YRNLVKIISSCSNEEFKELVLEHMPHGSL--------EKCLYSSNCILDIFQRLNIMIDV 531
+ N+V +S ++ LV++ + GS+ K + S +LD I+ +V
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG-VLDESTIATILREV 125
Query: 532 ASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL-IGEDQSMTQTQT--L 588
LEYLH N IH D+K N+LL + ++DFG++ L G D + + + +
Sbjct: 126 LEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 182
Query: 589 ATIGYIAPEYGREGRVFA-NGDVYSFGIMLMEIHSAKQQCVSF----VFNLAMECTIESL 643
T ++APE + R + D++SFGI +E+ + + V L ++ SL
Sbjct: 183 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 242
Query: 644 ELRINAKEI 652
E + KE+
Sbjct: 243 ETGVQDKEM 251
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMID 530
E +M+ + +V++I C E + LV+E G L K L + + D + ++
Sbjct: 68 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 125
Query: 531 VASVLEYLH-FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG-EDQSMTQTQTL 588
V+ ++YL NF +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 126 VSMGMKYLEESNF----VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 181
Query: 589 ATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQ 626
+ + APE + + DV+SFG+++ E S Q+
Sbjct: 182 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 219
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV EH+ H L K ++ + I L I + +L+ L F
Sbjct: 64 VKLLDVIHTENKLYLVFEHV-HQDL-KTFMDASALTGIPLPL-IKSYLFQLLQGLAFCHS 120
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T T + T+ Y APE +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 179 YYSTAVDIWSLGCIFAEM 196
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 17/213 (7%)
Query: 423 ATYGFNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFDIECEI-----MK 476
AT + IG G +GT+YK+R G VA+K + G E+ ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 477 SIHYRNLVKIISSCS----NEEFK-ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDV 531
+ + N+V+++ C+ + E K LV EH+ + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 532 ASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATI 591
L++LH N +V H DLKP N+L+ L+DFG+ ++ M + T+
Sbjct: 122 LRGLDFLHANCIV---HRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPVVVTL 175
Query: 592 GYIAPEYGREGRVFANGDVYSFGIMLMEIHSAK 624
Y APE + D++S G + E+ K
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 11/197 (5%)
Query: 427 FNENNLIGKGGFGTIYK-SRIGDGMEVAVKVFHLQCGRAFKSFDI-ECEIMKSIHYRNLV 484
F + + +G G G ++K S G+ +A K+ HL+ A ++ I E +++ + +V
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRL-NIMIDVASVLEYLHFNFL 543
+ ++ + +EHM GSL++ L + I + Q L + I V L YL
Sbjct: 87 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREKH- 143
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
++H D+KPSN+L++ L DFG++ LI SM + + T Y++PE +
Sbjct: 144 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTH 198
Query: 604 VFANGDVYSFGIMLMEI 620
D++S G+ L+E+
Sbjct: 199 YSVQSDIWSMGLSLVEM 215
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYR--NLVKIISS- 489
IGKG FG +++ + G EVAVK+F R +S+ E EI +++ R N++ I++
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 490 -CSNEEFKELVL--EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL--- 543
N + +L L ++ HGSL Y + + + + + + AS L +LH +
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 544 -VPVI-HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA------TIGYIA 595
P I H DLK N+L+ ++D G L + D S T T +A T Y+A
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLG---LAVRHD-SATDTIDIAPNHRVGTKRYMA 186
Query: 596 PEY------GREGRVFANGDVYSFGIMLMEI 620
PE + F D+Y+ G++ EI
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++ G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+ + MP G C+LD + LN +
Sbjct: 77 PHVCRLLGICLTSTV-QLITQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG+ KLL E++
Sbjct: 126 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSKR---VIH 157
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T T+ Y+ PE EGR+
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI-EGRMHDEK 212
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 213 VDLWSLGVLCYEF 225
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYR--NLVKIISS- 489
IGKG FG +++ + G EVAVK+F R +S+ E EI +++ R N++ I++
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 490 -CSNEEFKELVL--EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL--- 543
N + +L L ++ HGSL Y + + + + + + AS L +LH +
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 544 -VPVI-HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA------TIGYIA 595
P I H DLK N+L+ ++D G L + D S T T +A T Y+A
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLG---LAVRHD-SATDTIDIAPNHRVGTKRYMA 181
Query: 596 PEY------GREGRVFANGDVYSFGIMLMEI 620
PE + F D+Y+ G++ EI
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYR--NLVKIISS- 489
IGKG FG +++ + G EVAVK+F R +S+ E EI +++ R N++ I++
Sbjct: 11 IGKGRFGEVWRGK-WRGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 490 -CSNEEFKELVL--EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL--- 543
N + +L L ++ HGSL Y + + + + + + AS L +LH +
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 544 -VPVI-HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA------TIGYIA 595
P I H DLK N+L+ ++D G L + D S T T +A T Y+A
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLG---LAVRHD-SATDTIDIAPNHRVGTKRYMA 180
Query: 596 PEY------GREGRVFANGDVYSFGIMLMEI 620
PE + F D+Y+ G++ EI
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYR--NLVKIISS- 489
IGKG FG +++ + G EVAVK+F R +S+ E EI +++ R N++ I++
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 490 -CSNEEFKELVL--EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL--- 543
N + +L L ++ HGSL Y + + + + + + AS L +LH +
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 544 -VPVI-HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA------TIGYIA 595
P I H DLK N+L+ ++D G L + D S T T +A T Y+A
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLG---LAVRHD-SATDTIDIAPNHRVGTKRYMA 183
Query: 596 PEY------GREGRVFANGDVYSFGIMLMEI 620
PE + F D+Y+ G++ EI
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 30/210 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQCG---RAFKSFDIECEIMKSIHY 480
F + ++ G FGT+YK G+ +++ V + L+ +A K E +M S+
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR----------LNIMID 530
++ +++ C +L+ + MP G C+LD + LN +
Sbjct: 84 PHVCRLLGICLTSTV-QLITQLMPFG----------CLLDYVREHKDNIGSQYLLNWCVQ 132
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
+A + YL LV H DL NVL+ ++DFG+ KLL E++
Sbjct: 133 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
I ++A E DV+S+G+ + E+
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWEL 219
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 11/196 (5%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRN 482
F NL+GKG F +Y++ I G+EVA+K+ + + E +I + + +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
++++ + + + LVLE +G + + L + + + M + + + YLH +
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH- 131
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGI-TKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
++H DL SN+LL M ++DFG+ T+L + ++ T T YI+PE
Sbjct: 132 --GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT---LCGTPNYISPEIATR 186
Query: 602 GRVFANGDVYSFGIML 617
DV+S G M
Sbjct: 187 SAHGLESDVWSLGCMF 202
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 24/249 (9%)
Query: 422 RATYGFNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQ-CGRAFKSFDIECEIMKSIH 479
R Y E +IG G + + E VA+K +L+ C + E + M H
Sbjct: 14 RDDYELQE--VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 71
Query: 480 YRNLVKIISSCSNEEFKELVLEHMPHGSL--------EKCLYSSNCILDIFQRLNIMIDV 531
+ N+V +S ++ LV++ + GS+ K + S +LD I+ +V
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG-VLDESTIATILREV 130
Query: 532 ASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL-IGEDQSMTQTQT--L 588
LEYLH N IH D+K N+LL + ++DFG++ L G D + + + +
Sbjct: 131 LEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 187
Query: 589 ATIGYIAPEYGREGRVFA-NGDVYSFGIMLMEIHSAKQQCVSF----VFNLAMECTIESL 643
T ++APE + R + D++SFGI +E+ + + V L ++ SL
Sbjct: 188 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247
Query: 644 ELRINAKEI 652
E + KE+
Sbjct: 248 ETGVQDKEM 256
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 17/213 (7%)
Query: 423 ATYGFNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFDIECEI-----MK 476
AT + IG G +GT+YK+R G VA+K + G E+ ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 477 SIHYRNLVKIISSC----SNEEFK-ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDV 531
+ + N+V+++ C ++ E K LV EH+ + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 532 ASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATI 591
L++LH N +V H DLKP N+L+ L+DFG+ ++ M + T+
Sbjct: 122 LRGLDFLHANCIV---HRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVVVTL 175
Query: 592 GYIAPEYGREGRVFANGDVYSFGIMLMEIHSAK 624
Y APE + D++S G + E+ K
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 34/229 (14%)
Query: 425 YGFNENNLI-----GKGGFGTIYKS-------RIGDGMEVAVKVFHLQCGRA-FKSFDIE 471
+ F NL+ G+G FG + K+ R G VAVK+ + + E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSE 76
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIF--------- 522
++K +++ +++K+ +CS + L++E+ +GSL L S + +
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 523 -------QRLNIMIDVAS----VLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGI 571
+R M D+ S + + + + + ++H DL N+L+ + +SDFG+
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 572 TKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
++ + ED + ++Q + ++A E + DV+SFG++L EI
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 34/229 (14%)
Query: 425 YGFNENNLI-----GKGGFGTIYKS-------RIGDGMEVAVKVFHLQCGRA-FKSFDIE 471
+ F NL+ G+G FG + K+ R G VAVK+ + + E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSE 76
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIF--------- 522
++K +++ +++K+ +CS + L++E+ +GSL L S + +
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 523 -------QRLNIMIDVAS----VLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGI 571
+R M D+ S + + + + + ++H DL N+L+ + +SDFG+
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 572 TKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
++ + ED + ++Q + ++A E + DV+SFG++L EI
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 31/200 (15%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISS 489
+GKG F + + G+E A K+ + + R F+ + E I + + + N+V++ S
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 490 CSNEEFKELVLEHMPHGSL-----EKCLYS----SNCILDIFQRLNIMIDVASVLEYLHF 540
E F LV + + G L + YS S+CI I + + Y H
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES----------IAYCHS 146
Query: 541 NFLVPVIHCDLKPSNVLLDDT---MVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE 597
N ++H +LKP N+LL L+DFG L I + S T GY++PE
Sbjct: 147 N---GIVHRNLKPENLLLASKAKGAAVKLADFG---LAIEVNDSEAWHGFAGTPGYLSPE 200
Query: 598 YGREGRVFANGDVYSFGIML 617
++ D+++ G++L
Sbjct: 201 VLKKDPYSKPVDIWACGVIL 220
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 131
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T T+ Y+ PE EGR+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPPEMI-EGRMHDEK 186
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 187 VDLWSLGVLCYEF 199
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 15/193 (7%)
Query: 433 IGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRA-FKSFDIECEIMKSIHYRNLVKIISSC 490
+G G FG ++ G+E +K + + + + E E++KS+ + N++KI
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 491 SNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR---LNIMIDVASVLEYLHFNFLVPVI 547
+ +V+E G L + + S+ +M + + L Y H V+
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VV 146
Query: 548 HCDLKPSNVLLDDTMVA---HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
H DLKP N+L DT + DFG+ +L ++ S T T Y+APE +
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAPEVFKRDVT 203
Query: 605 FANGDVYSFGIML 617
F D++S G+++
Sbjct: 204 F-KCDIWSAGVVM 215
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 131
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T T+ Y+ PE EGR+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTXLCGTLDYLPPEMI-EGRMHDEK 186
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 187 VDLWSLGVLCYEF 199
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 132
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T T+ Y+ PE EGR+
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPPEMI-EGRMHDEK 187
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 188 VDLWSLGVLCYEF 200
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G + K L D + + ++A+ L Y H VIH
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 136
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S + T+ Y+ PE EGR+
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRXXLXGTLDYLPPEMI-EGRMHDEK 191
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 192 VDLWSLGVLCYEF 204
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSKR---VIH 131
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T T+ Y+ PE EGR+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI-EGRMHDEK 186
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 187 VDLWSLGVLCYEF 199
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 136
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T T+ Y+ PE EGR+
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPPEMI-EGRMHDEK 191
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 192 VDLWSLGVLCYEF 204
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 75 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 130
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T T+ Y+ PE EGR+
Sbjct: 131 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI-EGRMHDEK 185
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 186 VDLWSLGVLCYEF 198
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 131
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T T+ Y+ PE EGR+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPPEMI-EGRMHDEK 186
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 187 VDLWSLGVLCYEF 199
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 18/205 (8%)
Query: 433 IGKGGFGTIYKSRI----GDGMEVAVKVFH---LQCGRAFKSFDIECEIMKSIHYRNLVK 485
+G G FG + + G + VAVK L A F E M S+ +RNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCL--YSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
+ K +V E P GSL L + + +L R + VA + YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLESKRF 142
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL-IGEDQSMTQTQTLATIGYIAPEYGREG 602
IH DL N+LL + + DFG+ + L +D + Q + APE +
Sbjct: 143 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE-SLKT 198
Query: 603 RVFANG-DVYSFGIMLMEIHSAKQQ 626
R F++ D + FG+ L E+ + Q+
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQE 223
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 93 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSKR---VIH 148
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T T+ Y+ PE EGR+
Sbjct: 149 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI-EGRMHDEK 203
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 204 VDLWSLGVLCYEF 216
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRN 482
F+ +GKG FG +Y +R + A+KV F Q +A + E EI + + N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
++++ + L+LE+ P G++ + L D + + ++A+ L Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITELANALSYCHSK- 131
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
VIH D+KP N+LL ++DFG + S +T T+ Y+ PE EG
Sbjct: 132 --RVIHRDIKPENLLLGSNGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMI-EG 184
Query: 603 RVFANG-DVYSFGIMLMEI 620
R+ D++S G++ E
Sbjct: 185 RMHDEKVDLWSLGVLCYEF 203
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G FG +YK++ + G A KV + + + +E EI+ + + +VK++ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
++ +++E P G+++ + + L Q I + +LE L+F +IH DL
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 135
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY-----GREGRVFA 606
K NVL+ L+DFG++ + Q + + T ++APE ++
Sbjct: 136 KAGNVLMTLEGDIRLADFGVSAKNLKTLQK--RDSFIGTPYWMAPEVVMCETMKDTPYDY 193
Query: 607 NGDVYSFGIMLMEI 620
D++S GI L+E+
Sbjct: 194 KADIWSLGITLIEM 207
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 136
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T T+ Y+ PE EGR+
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI-EGRMHDEK 191
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 192 VDLWSLGVLCYEF 204
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 135
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T T+ Y+ PE EGR+
Sbjct: 136 RDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMI-EGRMHDEK 190
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 191 VDLWSLGVLCYEF 203
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 18/205 (8%)
Query: 433 IGKGGFGTIYKSRI----GDGMEVAVKVFH---LQCGRAFKSFDIECEIMKSIHYRNLVK 485
+G G FG + + G + VAVK L A F E M S+ +RNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCL--YSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
+ K +V E P GSL L + + +L R + VA + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLESKRF 132
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL-IGEDQSMTQTQTLATIGYIAPEYGREG 602
IH DL N+LL + + DFG+ + L +D + Q + APE +
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE-SLKT 188
Query: 603 RVFANG-DVYSFGIMLMEIHSAKQQ 626
R F++ D + FG+ L E+ + Q+
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQE 213
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 134
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T T+ Y+ PE EGR+
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI-EGRMHDEK 189
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 190 VDLWSLGVLCYEF 202
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 11/189 (5%)
Query: 434 GKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDI-ECEIMKSIHYRNLVKIISSCSN 492
G GG T + R G+ +A K+ HL+ A ++ I E +++ + +V + +
Sbjct: 27 GNGGVVTKVQHR-PSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 85
Query: 493 EEFKELVLEHMPHGSLEKCLYSSNCILD-IFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
+ + +EHM GSL++ L + I + I +++I V L YL + +H D+
Sbjct: 86 DGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAYLREKHQI--MHRDV 141
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVY 611
KPSN+L++ L DFG++ LI SM + + T Y+APE + D++
Sbjct: 142 KPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMAPERLQGTHYSVQSDIW 197
Query: 612 SFGIMLMEI 620
S G+ L+E+
Sbjct: 198 SMGLSLVEL 206
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 34/229 (14%)
Query: 425 YGFNENNLI-----GKGGFGTIYKS-------RIGDGMEVAVKVFHLQCGRA-FKSFDIE 471
+ F NL+ G+G FG + K+ R G VAVK+ + + E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENASPSELRDLLSE 76
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIF--------- 522
++K +++ +++K+ +CS + L++E+ +GSL L S + +
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 523 -------QRLNIMIDVAS----VLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGI 571
+R M D+ S + + + + + ++H DL N+L+ + +SDFG+
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 572 TKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
++ + ED + ++Q + ++A E + DV+SFG++L EI
Sbjct: 197 SRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 88/194 (45%), Gaps = 24/194 (12%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVF-HLQCGRAFKSFDI-ECEIMKSIHYRNLVKIISS 489
IG+G +G ++K R D G VA+K F + K + E ++K + + NLV ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV----LEYLHFNFLVP 545
+ LV E+ H L + LD +QR V S+ L+ ++F
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHE--------LDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 546 VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE-------Y 598
IH D+KP N+L+ V L DFG +LL G S +AT Y +PE Y
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGP--SDYYDDEVATRWYRSPELLVGDTQY 180
Query: 599 GREGRVFANGDVYS 612
G V+A G V++
Sbjct: 181 GPPVDVWAIGCVFA 194
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G FG +YK++ + G A KV + + + +E EI+ + + +VK++ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
++ +++E P G+++ + + L Q I + +LE L+F +IH DL
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 143
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY-----GREGRVFA 606
K NVL+ L+DFG++ + Q + + T ++APE ++
Sbjct: 144 KAGNVLMTLEGDIRLADFGVSAKNLKTLQK--RDSFIGTPYWMAPEVVMCETMKDTPYDY 201
Query: 607 NGDVYSFGIMLMEI 620
D++S GI L+E+
Sbjct: 202 KADIWSLGITLIEM 215
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 23/195 (11%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRNLVKIIS 488
IGKG F + +R + G EVAVK+ L K F E IMK +++ N+VK+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
E+ LV+E+ G + L + + + R + S ++Y H ++V H
Sbjct: 82 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKYIV---H 137
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATI----GYIAPEYGREGRV 604
DLK N+LLD M ++DFG + T L T Y APE +G+
Sbjct: 138 RDLKAENLLLDGDMNIKIADFGFS-------NEFTVGNKLDTFCGSPPYAAPELF-QGKK 189
Query: 605 F--ANGDVYSFGIML 617
+ DV+S G++L
Sbjct: 190 YDGPEVDVWSLGVIL 204
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 45/227 (19%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRA--------------------- 464
F E LIG GGFG ++K++ DG ++ +A
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGC 73
Query: 465 FKSFDIECEI----MKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNC-IL 519
+ FD + E ++S Y SS S + + +E G+LE+ + L
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 520 DIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579
D L + + ++Y+H L IH DLKPSN+ L DT + DFG+ L +
Sbjct: 134 DKVLALELFEQITKGVDYIHSKKL---IHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 190
Query: 580 QSMTQTQTLATIGYIAPE------YGREGRVFANGDVYSFGIMLMEI 620
+ +T++ T+ Y++PE YG+E D+Y+ G++L E+
Sbjct: 191 K---RTRSKGTLRYMSPEQISSQDYGKE------VDLYALGLILAEL 228
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 132
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T T+ Y+ PE EGR+
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWS----CHAPSSRRTTLSGTLDYLPPEMI-EGRMHDEK 187
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 188 VDLWSLGVLCYEF 200
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 427 FNENNLIGKGGFGTIYKS-RIGDGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNL 483
++ +GKG F + + G+E A K+ + + R F+ + E I + + + N+
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 484 VKIISSCSNEEFKELVLEHMPHGSL-----EKCLYS----SNCILDIFQRLNIMIDVASV 534
V++ S E F LV + + G L + YS S+CI I +
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES---------- 117
Query: 535 LEYLHFNFLVPVIHCDLKPSNVLLDDT---MVAHLSDFGITKLLIGEDQSMTQTQTLATI 591
+ Y H N ++H +LKP N+LL L+DFG L I + S T
Sbjct: 118 IAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFG---LAIEVNDSEAWHGFAGTP 171
Query: 592 GYIAPEYGREGRVFANGDVYSFGIML 617
GY++PE ++ D+++ G++L
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 134
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T T+ Y+ PE EGR+
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI-EGRMHDEK 189
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 190 VDLWSLGVLCYEF 202
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 17/213 (7%)
Query: 423 ATYGFNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFDIECEI-----MK 476
AT + IG G +GT+YK+R G VA+K + G E+ ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 477 SIHYRNLVKIISSCS----NEEFK-ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDV 531
+ + N+V+++ C+ + E K LV EH+ + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 532 ASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATI 591
L++LH N +V H DLKP N+L+ L+DFG+ ++ M + T+
Sbjct: 122 LRGLDFLHANCIV---HRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVVVTL 175
Query: 592 GYIAPEYGREGRVFANGDVYSFGIMLMEIHSAK 624
Y APE + D++S G + E+ K
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 29/206 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKI 486
F + IGKG FG ++K +V A K D+E + + + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVV----------AIKIIDLEEAEDEIEDIQQEITV 74
Query: 487 ISSCSNEEFKE------------LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV 534
+S C + + +++E++ GS L + D FQ ++ ++
Sbjct: 75 LSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP--FDEFQIATMLKEILKG 132
Query: 535 LEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYI 594
L+YLH IH D+K +NVLL + L+DFG+ L D + + + T ++
Sbjct: 133 LDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTPFWM 187
Query: 595 APEYGREGRVFANGDVYSFGIMLMEI 620
APE ++ + D++S GI +E+
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIEL 213
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 18/205 (8%)
Query: 433 IGKGGFGTIYKSRI----GDGMEVAVKVFH---LQCGRAFKSFDIECEIMKSIHYRNLVK 485
+G G FG + + G + VAVK L A F E M S+ +RNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCL--YSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
+ K +V E P GSL L + + +L R + VA + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLESKRF 136
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL-IGEDQSMTQTQTLATIGYIAPEYGREG 602
IH DL N+LL + + DFG+ + L +D + Q + APE +
Sbjct: 137 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE-SLKT 192
Query: 603 RVFANG-DVYSFGIMLMEIHSAKQQ 626
R F++ D + FG+ L E+ + Q+
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQE 217
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 427 FNENNLIGKGGFGTIYKS-RIGDGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNL 483
++ +GKG F + + G+E A K+ + + R F+ + E I + + + N+
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 484 VKIISSCSNEEFKELVLEHMPHGSL-----EKCLYS----SNCILDIFQRLNIMIDVASV 534
V++ S E F LV + + G L + YS S+CI I +
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES---------- 117
Query: 535 LEYLHFNFLVPVIHCDLKPSNVLLDDT---MVAHLSDFGITKLLIGEDQSMTQTQTLATI 591
+ Y H N ++H +LKP N+LL L+DFG L I + S T
Sbjct: 118 IAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFG---LAIEVNDSEAWHGFAGTP 171
Query: 592 GYIAPEYGREGRVFANGDVYSFGIML 617
GY++PE ++ D+++ G++L
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 427 FNENNLIGKGGFGTIYKS-RIGDGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNL 483
++ +GKG F + + G+E A K+ + + R F+ + E I + + + N+
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 66
Query: 484 VKIISSCSNEEFKELVLEHMPHGSL-----EKCLYS----SNCILDIFQRLNIMIDVASV 534
V++ S E F LV + + G L + YS S+CI I +
Sbjct: 67 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES---------- 116
Query: 535 LEYLHFNFLVPVIHCDLKPSNVLLDDT---MVAHLSDFGITKLLIGEDQSMTQTQTLATI 591
+ Y H N ++H +LKP N+LL L+DFG L I + S T
Sbjct: 117 IAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFG---LAIEVNDSEAWHGFAGTP 170
Query: 592 GYIAPEYGREGRVFANGDVYSFGIML 617
GY++PE ++ D+++ G++L
Sbjct: 171 GYLSPEVLKKDPYSKPVDIWACGVIL 196
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 18/205 (8%)
Query: 433 IGKGGFGTIYKSRI----GDGMEVAVKVFH---LQCGRAFKSFDIECEIMKSIHYRNLVK 485
+G G FG + + G + VAVK L A F E M S+ +RNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCL--YSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
+ K +V E P GSL L + + +L R + VA + YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLESKRF 142
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL-IGEDQSMTQTQTLATIGYIAPEYGREG 602
IH DL N+LL + + DFG+ + L +D + Q + APE +
Sbjct: 143 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE-SLKT 198
Query: 603 RVFANG-DVYSFGIMLMEIHSAKQQ 626
R F++ D + FG+ L E+ + Q+
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQE 223
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 18/205 (8%)
Query: 433 IGKGGFGTIYKSRI----GDGMEVAVKVFH---LQCGRAFKSFDIECEIMKSIHYRNLVK 485
+G G FG + + G + VAVK L A F E M S+ +RNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCL--YSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
+ K +V E P GSL L + + +L R + VA + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLESKRF 132
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL-IGEDQSMTQTQTLATIGYIAPEYGREG 602
IH DL N+LL + + DFG+ + L +D + Q + APE +
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE-SLKT 188
Query: 603 RVFANG-DVYSFGIMLMEIHSAKQQ 626
R F++ D + FG+ L E+ + Q+
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQE 213
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 73 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 128
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T T+ Y+ PE EGR+
Sbjct: 129 RDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMI-EGRMHDEK 183
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 184 VDLWSLGVLCYEF 196
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 415 FSYLEVC-RATYGFNENNLIGKGGFGTIYKS-RIGDGMEVAVKVFHLQ--CGRAFKSFDI 470
F + C R T + +GKG F + + + E A K+ + + R + +
Sbjct: 20 FQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER 79
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSL-----EKCLYS----SNCILDI 521
E I + + + N+V++ S S E F LV + + G L + YS S+CI I
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQI 139
Query: 522 FQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDT---MVAHLSDFGITKLLIGE 578
+ +N ++H + ++H DLKP N+LL L+DFG+ + GE
Sbjct: 140 LESVN----------HIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGE 186
Query: 579 DQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIML 617
Q+ T GY++PE R+ D+++ G++L
Sbjct: 187 QQAW--FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVIL 223
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 136
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S +T T+ Y+ PE EGR
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEXI-EGRXHDEK 191
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 192 VDLWSLGVLCYEF 204
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 18/205 (8%)
Query: 433 IGKGGFGTIYKSRI----GDGMEVAVKVFH---LQCGRAFKSFDIECEIMKSIHYRNLVK 485
+G G FG + + G + VAVK L A F E M S+ +RNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCL--YSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
+ K +V E P GSL L + + +L R + VA + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLESKRF 136
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL-IGEDQSMTQTQTLATIGYIAPEYGREG 602
IH DL N+LL + + DFG+ + L +D + Q + APE +
Sbjct: 137 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE-SLKT 192
Query: 603 RVFANG-DVYSFGIMLMEIHSAKQQ 626
R F++ D + FG+ L E+ + Q+
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQE 217
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 128
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T T + T+ Y APE +
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGXK 186
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 187 YYSTAVDIWSLGCIFAEM 204
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 432 LIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFDIECEIM-------KSIHYRNL 483
+IGKG FG + +R + + AVKV LQ K + E IM K++ + L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKV--LQKKAILKKKE-EKHIMSERNVLLKNVKHPFL 101
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
V + S + VL+++ G L L C L+ R ++AS L YLH
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH---S 157
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
+ +++ DLKP N+LLD L+DFG+ K I + + T + T Y+APE +
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGLCKENI--EHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 604 VFANGDVYSFGIMLMEI 620
D + G +L E+
Sbjct: 216 YDRTVDWWCLGAVLYEM 232
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + + A+KV F Q +A + E EI + + N++++
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---KVIH 131
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S + T+ Y+ PE EGR+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRAALCGTLDYLPPEMI-EGRMHDEK 186
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 187 VDLWSLGVLCYEF 199
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 18/205 (8%)
Query: 433 IGKGGFGTIYKSRI----GDGMEVAVKVFH---LQCGRAFKSFDIECEIMKSIHYRNLVK 485
+G G FG + + G + VAVK L A F E M S+ +RNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCL--YSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
+ K +V E P GSL L + + +L R + VA + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLESKRF 132
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL-IGEDQSMTQTQTLATIGYIAPEYGREG 602
IH DL N+LL + + DFG+ + L +D + Q + APE +
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE-SLKT 188
Query: 603 RVFANG-DVYSFGIMLMEIHSAKQQ 626
R F++ D + FG+ L E+ + Q+
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQE 213
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + + + VAVK+ + E E+MK I ++N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL-----------YSSNCILD---IFQRL-NI 527
++ ++ +C+ + +++E+ G+L + L Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
+A +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++APE + DV+SFG+++ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G FG +YK++ + + A KV + + + +E +I+ S + N+VK++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
E +++E G+++ + L Q + L YLH N +IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDL 161
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT--LATIGYIAPEY-----GREGRV 604
K N+L L+DFG++ ++ Q + + T ++APE ++
Sbjct: 162 KAGNILFTLDGDIKLADFGVS----AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 605 FANGDVYSFGIMLMEI 620
DV+S GI L+E+
Sbjct: 218 DYKADVWSLGITLIEM 233
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + + + VAVK+ + E E+MK I ++N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL-----------YSSNCILD---IFQRL-NI 527
++ ++ +C+ + +++E+ G+L + L Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
+A +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++APE + DV+SFG+++ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G FG +YK++ + + A KV + + + +E +I+ S + N+VK++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
E +++E G+++ + L Q + L YLH N +IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDL 161
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT--LATIGYIAPEY-----GREGRV 604
K N+L L+DFG++ ++ Q + + T ++APE ++
Sbjct: 162 KAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 605 FANGDVYSFGIMLMEI 620
DV+S GI L+E+
Sbjct: 218 DYKADVWSLGITLIEM 233
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISS 489
+GKG F + + ++ G E A K+ + + R + + E I + + + N+V++ S
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
S E L+ + + G L + + + + + +LE + + V+H
Sbjct: 90 ISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHR 145
Query: 550 DLKPSNVLLDDTM---VAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFA 606
DLKP N+LL + L+DFG+ + GE Q+ T GY++PE R+
Sbjct: 146 DLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKDPYGK 203
Query: 607 NGDVYSFGIML 617
D+++ G++L
Sbjct: 204 PVDLWACGVIL 214
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 432 LIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKS--IHYRNLVKII-- 487
LIG+G +G +YK + D VAVKVF + F + E I + + + N+ + I
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFIN---EKNIYRVPLMEHDNIARFIVG 75
Query: 488 ----SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF--- 540
++ E+ LV+E+ P+GSL K Y S D + V L YLH
Sbjct: 76 DERVTADGRMEYL-LVMEYYPNGSLXK--YLSLHTSDWVSSCRLAHSVTRGLAYLHTELP 132
Query: 541 --NFLVPVI-HCDLKPSNVLLDDTMVAHLSDFGITKLLIGE------DQSMTQTQTLATI 591
+ P I H DL NVL+ + +SDFG++ L G ++ + TI
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTI 192
Query: 592 GYIAPEYGREGRV--------FANGDVYSFGIMLMEI 620
Y+APE EG V D+Y+ G++ EI
Sbjct: 193 RYMAPEV-LEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 14/197 (7%)
Query: 427 FNENNLIGKGGFGTI-YKSRIGDGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLV 484
+ + IG GGF + I G VA+K+ G E E +K++ ++++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 485 KI--ISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
++ + +N+ F +VLE+ P G L + S + + + R+ + + S + Y+H
Sbjct: 72 QLYHVLETANKIF--MVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVHSQG 128
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
H DLKP N+L D+ L DFG+ G QT ++ Y APE +G
Sbjct: 129 YA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPEL-IQG 183
Query: 603 RVF--ANGDVYSFGIML 617
+ + + DV+S GI+L
Sbjct: 184 KSYLGSEADVWSMGILL 200
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G FG +YK++ + + A KV + + + +E +I+ S + N+VK++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
E +++E G+++ + L Q + L YLH N +IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDL 161
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT--LATIGYIAPEY-----GREGRV 604
K N+L L+DFG++ ++ Q + + T ++APE ++
Sbjct: 162 KAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPY 217
Query: 605 FANGDVYSFGIMLMEI 620
DV+S GI L+E+
Sbjct: 218 DYKADVWSLGITLIEM 233
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 32/210 (15%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKI 486
F+ + +IG+GGFG +Y R D K++ ++C + + E + +++ R ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIMLSL 245
Query: 487 ISS-------CSNEEFK-----ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV 534
+S+ C + F +L+ M G L L +F ++ A +
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEI 301
Query: 535 ---LEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATI 591
LE++H F V++ DLKP+N+LLD+ +SD G L + ++ T
Sbjct: 302 ILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLG----LACDFSKKKPHASVGTH 354
Query: 592 GYIAPEYGREGRVF-ANGDVYSFGIMLMEI 620
GY+APE ++G + ++ D +S G ML ++
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 32/210 (15%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKI 486
F+ + +IG+GGFG +Y R D K++ ++C + + E + +++ R ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIMLSL 245
Query: 487 ISS-------CSNEEFK-----ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV 534
+S+ C + F +L+ M G L L +F ++ A +
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEI 301
Query: 535 ---LEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATI 591
LE++H F V++ DLKP+N+LLD+ +SD G L + ++ T
Sbjct: 302 ILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLG----LACDFSKKKPHASVGTH 354
Query: 592 GYIAPEYGREGRVF-ANGDVYSFGIMLMEI 620
GY+APE ++G + ++ D +S G ML ++
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 180 YYSTAVDIWSLGCIFAEM 197
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 32/210 (15%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKI 486
F+ + +IG+GGFG +Y R D K++ ++C + + E + +++ R ++ +
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIMLSL 244
Query: 487 ISS-------CSNEEFK-----ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV 534
+S+ C + F +L+ M G L L +F ++ A +
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEI 300
Query: 535 ---LEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATI 591
LE++H F V++ DLKP+N+LLD+ +SD G L + ++ T
Sbjct: 301 ILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLG----LACDFSKKKPHASVGTH 353
Query: 592 GYIAPEYGREGRVF-ANGDVYSFGIMLMEI 620
GY+APE ++G + ++ D +S G ML ++
Sbjct: 354 GYMAPEVLQKGVAYDSSADWFSLGCMLFKL 383
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 32/210 (15%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKI 486
F+ + +IG+GGFG +Y R D K++ ++C + + E + +++ R ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIMLSL 245
Query: 487 ISS-------CSNEEFK-----ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV 534
+S+ C + F +L+ M G L L +F ++ A +
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEI 301
Query: 535 ---LEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATI 591
LE++H F V++ DLKP+N+LLD+ +SD G L + ++ T
Sbjct: 302 ILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLG----LACDFSKKKPHASVGTH 354
Query: 592 GYIAPEYGREGRVF-ANGDVYSFGIMLMEI 620
GY+APE ++G + ++ D +S G ML ++
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 28/213 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + +VAVK+ + E E+MK I ++N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL---------YSSNCILDIFQRLN------I 527
++ ++ +C+ + +++E+ G+L + L YS N + ++L+
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
VA +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 197 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ ++APE + DV+SFG++L EI
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 286
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHL---QCGRAFKSFDIECEIMKSIHYRN 482
F++ IG G FG +Y +R + + VA+K Q ++ E ++ + + N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV-------L 535
++ E LV+E+ CL S++ +L++ ++ +++A+V L
Sbjct: 116 TIQYRGCYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 536 EYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
YLH + + IH D+K N+LL + + L DFG ++ + T ++A
Sbjct: 168 AYLHSHNM---IHRDVKAGNILLSEPGLVKLGDFGSASIMA------PANXFVGTPYWMA 218
Query: 596 PEY---GREGRVFANGDVYSFGIMLMEIHSAK 624
PE EG+ DV+S GI +E+ K
Sbjct: 219 PEVILAMDEGQYDGKVDVWSLGITCIELAERK 250
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 122
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T T + T+ Y APE +
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 180
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 181 YYSTAVDIWSLGCIFAEM 198
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 128
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T T + T+ Y APE +
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 186
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 187 YYSTAVDIWSLGCIFAEM 204
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 180 YYSTAVDIWSLGCIFAEM 197
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 36/210 (17%)
Query: 422 RATYGFNENNLIGKGGFGTIY--KSRIGDGMEVAVKVFHLQCGR---AFKSFDIECEI-- 474
R T+ F E ++G G F ++ K R+ K+F L+C + AF+ +E EI
Sbjct: 8 RKTFIFME--VLGSGAFSEVFLVKQRLTG------KLFALKCIKKSPAFRDSSLENEIAV 59
Query: 475 MKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSL-----EKCLYSSNCILDIFQRLNIMI 529
+K I + N+V + + LV++ + G L E+ +Y+ + Q+
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ----- 114
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFGITKLLIGEDQSMTQTQ 586
V S ++YLH N ++H DLKP N+L ++ ++DFG++K+ +Q+ +
Sbjct: 115 -VLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMST 166
Query: 587 TLATIGYIAPEYGREGRVFANGDVYSFGIM 616
T GY+APE + D +S G++
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 196
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLSFCHS 121
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 180 YYSTAVDIWSLGCIFAEM 197
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSKR---VIH 157
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S + T+ Y+ PE EGR+
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRDDLCGTLDYLPPEMI-EGRMHDEK 212
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 213 VDLWSLGVLCYEF 225
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 30/216 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + + + VAVK+ + E E+MK I ++N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL-----------YSSNCILD---IFQRL-NI 527
++ ++ +C+ + +++E+ G+L + L Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
+A +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 588 LATIGYIAPEYGREGRVFAN-GDVYSFGIMLMEIHS 622
+ ++APE RV+ + DV+SFG+++ EI +
Sbjct: 220 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 120
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T T + T+ Y APE +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 179 YYSTAVDIWSLGCIFAEM 196
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 180 YYSTAVDIWSLGCIFAEM 197
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 120
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T T + T+ Y APE +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 179 YYSTAVDIWSLGCIFAEM 196
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 134
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S + T+ Y+ PE EGR+
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLPPEMI-EGRMHDEK 189
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 190 VDLWSLGVLCYEF 202
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 28/213 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + +VAVK+ + E E+MK I ++N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL---------YSSNCILDIFQRLN------I 527
++ ++ +C+ + +++E+ G+L + L YS N + ++L+
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
VA +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 145 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ ++APE + DV+SFG++L EI
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 22/207 (10%)
Query: 431 NLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGR--AFKSFDIECEIMKSIHYRNLVKIIS 488
LIGKG FG +Y R EVA+++ ++ K+F E + + N+V +
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+C + ++ +L + + +LD+ + I ++ + YLH ++H
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILH 153
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITK----LLIGEDQSMTQTQTLATIGYIAPEYGR---- 600
DLK NV D+ V ++DFG+ L G + + Q + ++APE R
Sbjct: 154 KDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQN-GWLCHLAPEIIRQLSP 211
Query: 601 ---EGRV--FANGDVYSFGIMLMEIHS 622
E ++ + DV++ G + E+H+
Sbjct: 212 DTEEDKLPFSKHSDVFALGTIWYELHA 238
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 131
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S + T+ Y+ PE EGR+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRAALCGTLDYLPPEMI-EGRMHDEK 186
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 187 VDLWSLGVLCYEF 199
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 40/218 (18%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK 485
F E LIG GGFG ++K++ DG +K +A + E + + + + N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVH 68
Query: 486 I------------ISSCSNEEFKE----LVLEHMPHGSLEKCLYSSNC-ILDIFQRLNIM 528
SS ++ K + +E G+LE+ + LD L +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 529 IDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTL 588
+ ++Y+H L I+ DLKPSN+ L DT + DFG+ L + + + ++
Sbjct: 129 EQITKGVDYIHSKKL---INRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RXRSK 182
Query: 589 ATIGYIAPE------YGREGRVFANGDVYSFGIMLMEI 620
T+ Y++PE YG+E D+Y+ G++L E+
Sbjct: 183 GTLRYMSPEQISSQDYGKE------VDLYALGLILAEL 214
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 134
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S + T+ Y+ PE EGR+
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDDLCGTLDYLPPEMI-EGRMHDEK 189
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 190 VDLWSLGVLCYEF 202
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 28/213 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + +VAVK+ + E E+MK I ++N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL---------YSSNCILDIFQRLN------I 527
++ ++ +C+ + +++E+ G+L + L YS N + ++L+
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
VA +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 148 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ ++APE + DV+SFG++L EI
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 30/216 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + + + VAVK+ + E E+MK I ++N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL-----------YSSNCILD---IFQRL-NI 527
++ ++ +C+ + +++E+ G+L + L Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
+A +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 588 LATIGYIAPEYGREGRVFAN-GDVYSFGIMLMEIHS 622
+ ++APE RV+ + DV+SFG+++ EI +
Sbjct: 220 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 125
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T T + T+ Y APE +
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 183
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 184 YYSTAVDIWSLGCIFAEM 201
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 28/213 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + +VAVK+ + E E+MK I ++N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL---------YSSNCILDIFQRLN------I 527
++ ++ +C+ + +++E+ G+L + L YS N + ++L+
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
VA +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 149 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ ++APE + DV+SFG++L EI
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYR--NLVKIISSC 490
+GKG +G +++ G VAVK+F R KS+ E E+ ++ R N++ I+S
Sbjct: 45 VGKGRYGEVWRGS-WQGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 491 SNEEFKELVLEHMPH----GSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL--- 543
L + H GSL Y LD L I++ +AS L +LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYD--YLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 544 -VPVI-HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-----LATIGYIAP 596
P I H DLK N+L+ ++D G L + QS Q + T Y+AP
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLG---LAVMHSQSTNQLDVGNNPRVGTKRYMAP 215
Query: 597 EYGREG------RVFANGDVYSFGIMLMEI 620
E E + D+++FG++L E+
Sbjct: 216 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 133
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL +++FG + S +T T+ Y+ PE EGR+
Sbjct: 134 RDIKPENLLLGSAGELKIANFGWS----VHAPSSRRTTLCGTLDYLPPEMI-EGRMHDEK 188
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 189 VDLWSLGVLCYEF 201
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 134
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL +++FG + S +T T+ Y+ PE EGR+
Sbjct: 135 RDIKPENLLLGSAGELKIANFGWS----VHAPSSRRTTLCGTLDYLPPEMI-EGRMHDEK 189
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 190 VDLWSLGVLCYEF 202
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 28/213 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + +VAVK+ + E E+MK I ++N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL---------YSSNCILDIFQRLN------I 527
++ ++ +C+ + +++E+ G+L + L YS N + ++L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
VA +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ ++APE + DV+SFG++L EI
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 28/213 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + +VAVK+ + E E+MK I ++N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL---------YSSNCILDIFQRLN------I 527
++ ++ +C+ + +++E+ G+L + L YS N + ++L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
VA +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ ++APE + DV+SFG++L EI
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 9/195 (4%)
Query: 432 LIGK-GGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISS 489
+IG+ G FG +YK++ + + A KV + + + +E +I+ S + N+VK++ +
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
E +++E G+++ + L Q + L YLH N +IH
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 132
Query: 550 DLKPSNVLLDDTMVAHLSDFGI----TKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVF 605
DLK N+L L+DFG+ T+ I S T + E ++
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 192
Query: 606 ANGDVYSFGIMLMEI 620
DV+S GI L+E+
Sbjct: 193 YKADVWSLGITLIEM 207
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 131
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S + T+ Y+ PE EGR+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLPPEMI-EGRMHDEK 186
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 187 VDLWSLGVLCYEF 199
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 30/216 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + + + VAVK+ + E E+MK I ++N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL-----------YSSNCILD---IFQRL-NI 527
++ ++ +C+ + +++E+ G+L + L Y N + + F+ L +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
+A +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 588 LATIGYIAPEYGREGRVFAN-GDVYSFGIMLMEIHS 622
+ ++APE RV+ + DV+SFG+++ EI +
Sbjct: 220 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 31/212 (14%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHL---QCGRAFKSFDIECEIMKSIHYRN 482
F++ IG G FG +Y +R + + VA+K Q ++ E ++ + + N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV-------L 535
++ E LV+E+ CL S++ +L++ ++ +++A+V L
Sbjct: 77 TIQYRGCYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 128
Query: 536 EYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
YLH + + IH D+K N+LL + + L DFG ++ + T ++A
Sbjct: 129 AYLHSHNM---IHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMA 179
Query: 596 PEY---GREGRVFANGDVYSFGIMLMEIHSAK 624
PE EG+ DV+S GI +E+ K
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIELAERK 211
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYR--NLVKIISSC 490
+GKG +G +++ G VAVK+F R KS+ E E+ ++ R N++ I+S
Sbjct: 16 VGKGRYGEVWRGS-WQGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 491 SNEEFKELVLEHMPH----GSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL--- 543
L + H GSL Y LD L I++ +AS L +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYD--YLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 544 -VPVI-HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-----LATIGYIAP 596
P I H DLK N+L+ ++D G L + QS Q + T Y+AP
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLG---LAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 597 EYGREG------RVFANGDVYSFGIMLMEI 620
E E + D+++FG++L E+
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 133
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S + T+ Y+ PE EGR+
Sbjct: 134 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRXXLCGTLDYLPPEMI-EGRMHDEK 188
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 189 VDLWSLGVLCYEF 201
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + + + VAVK+ + E E+MK I ++N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL-----------YSSNCILD---IFQRL-NI 527
++ ++ +C+ + +++E+ G+L + L Y N + + F+ L +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
+A +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 588 LATIGYIAPEYGREGRVFAN-GDVYSFGIMLMEI 620
+ ++APE RV+ + DV+SFG+++ EI
Sbjct: 220 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYR--NLVKIISSC 490
+GKG +G +++ G VAVK+F R KS+ E E+ ++ R N++ I+S
Sbjct: 16 VGKGRYGEVWRGS-WQGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 491 SNEEFKELVLEHMPH----GSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL--- 543
L + H GSL Y LD L I++ +AS L +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYD--YLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 544 -VPVI-HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-----LATIGYIAP 596
P I H DLK N+L+ ++D G L + QS Q + T Y+AP
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLG---LAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 597 EYGREG------RVFANGDVYSFGIMLMEI 620
E E + D+++FG++L E+
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 132
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + + S T T+ Y+ PE EGR+
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDT-LCGTLDYLPPEMI-EGRMHDEK 187
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 188 VDLWSLGVLCYEF 200
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV F Q +A + E EI + + N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ L+LE+ P G++ + L D + + ++A+ L Y H VIH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCHSK---RVIH 134
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+LL ++DFG + S + T+ Y+ PE EGR+
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS----VHAPSSRRXXLCGTLDYLPPEMI-EGRMHDEK 189
Query: 609 -DVYSFGIMLMEI 620
D++S G++ E
Sbjct: 190 VDLWSLGVLCYEF 202
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEV-AVKV-FHLQCGRAFKSFDI--ECEIMKSIHYRN 482
F+ +GKG FG +Y +R + A+KV F Q +A + E EI + + N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
++++ + L+LE+ P G++ + L D + + ++A+ L Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITELANALSYCHSK- 131
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
VIH D+KP N+LL ++DFG + S + T+ Y+ PE EG
Sbjct: 132 --RVIHRDIKPENLLLGSNGELKIADFGWSV----HAPSSRRDTLCGTLDYLPPEMI-EG 184
Query: 603 RVFANG-DVYSFGIMLMEI 620
R+ D++S G++ E
Sbjct: 185 RMHDEKVDLWSLGVLCYEF 203
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 471 ECEIMKSIHYRNLVKIISSCS--NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIM 528
E I+K + + N+VK++ NE+ +V E + G + + D Q
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED--QARFYF 143
Query: 529 IDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTL 588
D+ +EYLH+ +IH D+KPSN+L+ + ++DFG++ G D + + T+
Sbjct: 144 QDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL--SNTV 198
Query: 589 ATIGYIAPEYGREGRVFANG---DVYSFGIML 617
T ++APE E R +G DV++ G+ L
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEVAVKVF--------HLQCGRAFKSFDIECEIMKSI 478
F + ++G+GGFG ++ + M+ K++ L+ + ++ +E +I+ +
Sbjct: 187 FLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 479 HYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV---L 535
H R +V + + + LV+ M G + +Y+ + FQ + A + L
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 536 EYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGIT-KLLIGEDQSMTQTQTLA-TIGY 593
E+LH +I+ DLKP NVLLDD +SD G+ +L G+ T+T+ A T G+
Sbjct: 303 EHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ----TKTKGYAGTPGF 355
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEIHSAK 624
+APE + D ++ G+ L E+ +A+
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCGRA-FKSFDIECEIMKSI-HYRN 482
+G+G FG + K + + + VAVK+ E E+MK I ++N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL-----------YSSNCILD---IFQRL-NI 527
++ ++ +C+ + +++E+ G+L + L Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
+A +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 588 LATIGYIAPEYGREGRVFAN-GDVYSFGIMLMEIHS 622
+ ++APE RV+ + DV+SFG+++ EI +
Sbjct: 220 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 85/200 (42%), Gaps = 15/200 (7%)
Query: 79 SSTPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLS--HSLEIFDMS-KCNVSGG 135
S P SF + C++L + L +N +L R+ + LE D+S +
Sbjct: 45 SHVPAASFRA----CRNLTILWLHSN----VLARIDAAAFTGLALLEQLDLSDNAQLRSV 96
Query: 136 IPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFR-LVKL 194
P L L ++L L P R L LQY+ L+DN L+ +P D FR L L
Sbjct: 97 DPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNL 155
Query: 195 YKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGP--LPLEIGNLKVLIGIDFSMNNFSS 252
L L GN++S F L SL L L N P +L L+ + NN S+
Sbjct: 156 THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 215
Query: 253 VIPTTIGSLKDLQYLFLGYN 272
+ + L+ LQYL L N
Sbjct: 216 LPTEALAPLRALQYLRLNDN 235
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 131 NVSGGIPEE-IGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIF 189
N +P++ +L NLT ++L GN+++ R L L + L N++ P+
Sbjct: 139 NALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFR 198
Query: 190 RLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGP 229
L +L L L N LS + L +L+ L L ND P
Sbjct: 199 DLGRLMTLYLFANNLSALPTEALAPLRALQYLRL--NDNP 236
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEVAVKVF--------HLQCGRAFKSFDIECEIMKSI 478
F + ++G+GGFG ++ + M+ K++ L+ + ++ +E +I+ +
Sbjct: 187 FLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 479 HYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV---L 535
H R +V + + + LV+ M G + +Y+ + FQ + A + L
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 536 EYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGIT-KLLIGEDQSMTQTQTLA-TIGY 593
E+LH +I+ DLKP NVLLDD +SD G+ +L G+ T+T+ A T G+
Sbjct: 303 EHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ----TKTKGYAGTPGF 355
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEIHSAK 624
+APE + D ++ G+ L E+ +A+
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 9/196 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEV-AVKVFHLQCGRAFKSF-DIECEIMKSIHYRNLV 484
F + IGKG FG ++K +V A+K+ L+ E ++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
K S + +++E++ GS L LD Q I+ ++ L+YLH
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSE--- 143
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
IH D+K +NVLL + L+DFG+ L D + + + T ++APE ++
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIKQSAY 201
Query: 605 FANGDVYSFGIMLMEI 620
+ D++S GI +E+
Sbjct: 202 DSKADIWSLGITAIEL 217
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 36/216 (16%)
Query: 433 IGKGGFGTIYKS---RIGDGMEVAVKVFH-----LQCGRAFKSFDIECEIMKSIHYRNLV 484
+GKG +G ++KS R G+ + V K+F R F+ I E+ + NL+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVK-KIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
++ + N+ LV ++M L + ++ IL+ + ++ + V++YLH L
Sbjct: 76 NVLRA-DNDRDVYLVFDYM-ETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSGGL- 130
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG-------------------EDQSMTQT 585
+H D+KPSN+LL+ ++DFG+++ + +D T
Sbjct: 131 --LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 586 QTLATIGYIAPEYGREGRVFANG-DVYSFGIMLMEI 620
+AT Y APE + G D++S G +L EI
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEI 224
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEVAVKVF--------HLQCGRAFKSFDIECEIMKSI 478
F + ++G+GGFG ++ + M+ K++ L+ + ++ +E +I+ +
Sbjct: 187 FLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 479 HYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV---L 535
H R +V + + + LV+ M G + +Y+ + FQ + A + L
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 536 EYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGIT-KLLIGEDQSMTQTQTLA-TIGY 593
E+LH +I+ DLKP NVLLDD +SD G+ +L G+ T+T+ A T G+
Sbjct: 303 EHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ----TKTKGYAGTPGF 355
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEIHSAK 624
+APE + D ++ G+ L E+ +A+
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 431 NLIGKGGFGTIYKSRIGDGMEV----AVKVFH---LQCGRAFKSFDIECEIMKSIHYRNL 483
++G+G FG ++ + G + A+KV L+ ++ +E +I+ +++ +
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVNHPFI 88
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK+ + E L+L+ + G L L S + + ++A L++LH
Sbjct: 89 VKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLH---S 144
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE-YGREG 602
+ +I+ DLKP N+LLD+ L+DFG++K I D T+ Y+APE R G
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D +SFG+++ E+
Sbjct: 203 HT-QSADWWSFGVLMFEM 219
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 16/198 (8%)
Query: 431 NLIGKGGFGTIY----KSRIGDGMEVAVKVFH---LQCGRAFKSFDIECEIMKSIHYRNL 483
++G+G FG ++ +R G A+KV L+ ++ +E +I+ +++ +
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMERDILADVNHPFV 92
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK+ + E L+L+ + G L L S + + ++A L++LH
Sbjct: 93 VKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALGLDHLH---S 148
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE-YGREG 602
+ +I+ DLKP N+LLD+ L+DFG++K I D T+ Y+APE R+G
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAI--DHEKKAYSFCGTVEYMAPEVVNRQG 206
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D +S+G+++ E+
Sbjct: 207 HSHS-ADWWSYGVLMFEM 223
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 31/226 (13%)
Query: 422 RATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHY 480
R F E ++G+G FG + K+R D A+K + E ++ S+++
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 481 -------------RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNI 527
RN VK +++ + + +E+ +G+L ++S N + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITK-------LLIGEDQ 580
+ L Y+H +IH DLKP N+ +D++ + DFG+ K +L + Q
Sbjct: 122 FRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 581 SM-----TQTQTLATIGYIAPEY-GREGRVFANGDVYSFGIMLMEI 620
++ T + T Y+A E G D+YS GI+ E+
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 85/200 (42%), Gaps = 15/200 (7%)
Query: 79 SSTPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLS--HSLEIFDMS-KCNVSGG 135
S P SF + C++L + L +N +L R+ + LE D+S +
Sbjct: 44 SHVPAASFRA----CRNLTILWLHSN----VLARIDAAAFTGLALLEQLDLSDNAQLRSV 95
Query: 136 IPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFR-LVKL 194
P L L ++L L P R L LQY+ L+DN L+ +P D FR L L
Sbjct: 96 DPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNL 154
Query: 195 YKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGP--LPLEIGNLKVLIGIDFSMNNFSS 252
L L GN++S F L SL L L N P +L L+ + NN S+
Sbjct: 155 THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 214
Query: 253 VIPTTIGSLKDLQYLFLGYN 272
+ + L+ LQYL L N
Sbjct: 215 LPTEALAPLRALQYLRLNDN 234
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 131 NVSGGIPEE-IGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIF 189
N +P++ +L NLT ++L GN+++ R L L + L N++ P+
Sbjct: 138 NALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFR 197
Query: 190 RLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGP 229
L +L L L N LS + L +L+ L L ND P
Sbjct: 198 DLGRLMTLYLFANNLSALPTEALAPLRALQYLRL--NDNP 235
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 9/196 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEV-AVKVFHLQCGRAFKSF-DIECEIMKSIHYRNLV 484
F + IGKG FG ++K +V A+K+ L+ E ++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
K S + +++E++ GS L LD Q I+ ++ L+YLH
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSE--- 138
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
IH D+K +NVLL + L+DFG+ L D + + + T ++APE ++
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 605 FANGDVYSFGIMLMEI 620
+ D++S GI +E+
Sbjct: 197 DSKADIWSLGITAIEL 212
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 28/213 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + +VAVK+ + E E+MK I ++N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL---------YSSNCILDIFQRLN------I 527
++ ++ +C+ + +++E+ G+L + L +S N + ++L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
VA +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ ++APE + DV+SFG++L EI
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEVAVKVF--------HLQCGRAFKSFDIECEIMKSI 478
F + ++G+GGFG ++ + M+ K++ L+ + ++ +E +I+ +
Sbjct: 187 FLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 479 HYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV---L 535
H R +V + + + LV+ M G + +Y+ + FQ + A + L
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 536 EYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGIT-KLLIGEDQSMTQTQTLA-TIGY 593
E+LH +I+ DLKP NVLLDD +SD G+ +L G+ T+T+ A T G+
Sbjct: 303 EHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ----TKTKGYAGTPGF 355
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEIHSAK 624
+APE + D ++ G+ L E+ +A+
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGME--VAVKVFHLQCGRAFKSF-DIECEIMKSIHYRNL 483
F + IGKG FG ++K I + + VA+K+ L+ E ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
K S + +++E++ GS L LD Q I+ ++ L+YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSE-- 123
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
IH D+K +NVLL + L+DFG+ L D + + + T ++APE ++
Sbjct: 124 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIKQSA 180
Query: 604 VFANGDVYSFGIMLMEI 620
+ D++S GI +E+
Sbjct: 181 YDSKADIWSLGITAIEL 197
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 9/196 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEV-AVKVFHLQCGRAFKSF-DIECEIMKSIHYRNLV 484
F + IGKG FG ++K +V A+K+ L+ E ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
K S + +++E++ GS L LD Q I+ ++ L+YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSE--- 123
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
IH D+K +NVLL + L+DFG+ L D + + + T ++APE ++
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 605 FANGDVYSFGIMLMEI 620
+ D++S GI +E+
Sbjct: 182 DSKADIWSLGITAIEL 197
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNLVKIISSC 490
IG+G +G +YK++ G A+K L+ S I E I+K + + N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 491 SNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCD 550
++ LV EH+ L+K L L+ + ++ + + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRD 125
Query: 551 LKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG-D 609
LKP N+L++ ++DFG+ + + T + T+ Y AP+ + ++ D
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAPDVLMGSKKYSTTID 183
Query: 610 VYSFGIMLMEI 620
++S G + E+
Sbjct: 184 IWSVGCIFAEM 194
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 431 NLIGKGGFGTIYKSRIGDGMEV----AVKVFH---LQCGRAFKSFDIECEIMKSIHYRNL 483
++G+G FG ++ + G + A+KV L+ ++ +E +I+ +++ +
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVNHPFI 88
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK+ + E L+L+ + G L L S + + ++A L++LH
Sbjct: 89 VKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLH---S 144
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE-YGREG 602
+ +I+ DLKP N+LLD+ L+DFG++K I D T+ Y+APE R G
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D +SFG+++ E+
Sbjct: 203 HT-QSADWWSFGVLMFEM 219
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNLVKIISSC 490
IG+G +G +YK++ G A+K L+ S I E I+K + + N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 491 SNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCD 550
++ LV EH+ L+K L L+ + ++ + + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRD 125
Query: 551 LKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG-D 609
LKP N+L++ ++DFG+ + + T + T+ Y AP+ + ++ D
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSKKYSTTID 183
Query: 610 VYSFGIMLMEI 620
++S G + E+
Sbjct: 184 IWSVGCIFAEM 194
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 20/216 (9%)
Query: 423 ATYGFNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFK-----SFDIECEIMK 476
AT + IG G +GT+YK+R G VA+K + G S E +++
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 477 SIH---YRNLVKIISSCS----NEEFK-ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIM 528
+ + N+V+++ C+ + E K LV EH+ + L ++M
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 529 IDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTL 588
L++LH N +V H DLKP N+L+ L+DFG+ ++ M T +
Sbjct: 127 RQFLRGLDFLHANCIV---HRDLKPENILVTSGGTVKLADFGLARIY---SYQMALTPVV 180
Query: 589 ATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAK 624
T+ Y APE + D++S G + E+ K
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNLVKIISSC 490
IG+G +G +YK++ G A+K L+ S I E I+K + + N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 491 SNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCD 550
++ LV EH+ L+K L L+ + ++ + + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRD 125
Query: 551 LKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG-D 609
LKP N+L++ ++DFG+ + + T + T+ Y AP+ + ++ D
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSKKYSTTID 183
Query: 610 VYSFGIMLMEI 620
++S G + E+
Sbjct: 184 IWSVGCIFAEM 194
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + + + VAVK+ + E E+MK I ++N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL-----------YSSNCILD---IFQRL-NI 527
++ ++ +C+ + +++E+ G+L + L Y N + + F+ L +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
+A +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 152 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++APE + DV+SFG+++ EI +
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + + + VAVK+ + E E+MK I ++N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL-----------YSSNCILD---IFQRL-NI 527
++ ++ +C+ + +++E+ G+L + L Y N + + F+ L +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
+A +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 209 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++APE + DV+SFG+++ EI +
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 431 NLIGKGGFGTIYKSRIGDGMEV----AVKVFH---LQCGRAFKSFDIECEIMKSIHYRNL 483
++G+G FG ++ + G + A+KV L+ ++ +E +I+ +++ +
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVNHPFI 89
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK+ + E L+L+ + G L L S + + ++A L++LH
Sbjct: 90 VKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLH---S 145
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE-YGREG 602
+ +I+ DLKP N+LLD+ L+DFG++K I D T+ Y+APE R G
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRG 203
Query: 603 RVFANGDVYSFGIMLMEI 620
+ D +SFG+++ E+
Sbjct: 204 HT-QSADWWSFGVLMFEM 220
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 30/216 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + + + VAVK+ + E E+MK I ++N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL-----------YSSNCILD---IFQRL-NI 527
++ ++ +C+ + +++E+ G+L + L Y N + + F+ L +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
+A +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 155 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 588 LATIGYIAPEYGREGRVFAN-GDVYSFGIMLMEIHS 622
+ ++APE RV+ + DV+SFG+++ EI +
Sbjct: 212 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 83/189 (43%), Gaps = 7/189 (3%)
Query: 88 SSLSNCKSLVVFLLSNNPLNGILPRMSIG-NLSHSLEIFDMSKCNVSGGIPEEIGNLTNL 146
+S +C++L + L +N L GI G L L++ D ++ V P L +L
Sbjct: 49 ASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVD--PTTFRGLGHL 106
Query: 147 TAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFR-LVKLYKLDLGGNKLS 205
++L L P R L LQY+ L+DN L+ +P + FR L L L L GN++
Sbjct: 107 HTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQA-LPDNTFRDLGNLTHLFLHGNRIP 165
Query: 206 GSILTCFSNLASLRTLSLSYNDGPL--PLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKD 263
F L SL L L N P +L L+ + NN S + + L+
Sbjct: 166 SVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRS 225
Query: 264 LQYLFLGYN 272
LQYL L N
Sbjct: 226 LQYLRLNDN 234
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Query: 149 IYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGN-KLSGS 207
I+L GN+++ + + + L + L N L G L L +LDL N +L
Sbjct: 36 IFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVV 95
Query: 208 ILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDF---SMNNFSSVIPTTIGSLKDL 264
T F L L TL L G L G + L + + NN ++ T L +L
Sbjct: 96 DPTTFRGLGHLHTLHLD-RCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNL 154
Query: 265 QYLFLGYNILKGSIPD 280
+LFL N + S+P+
Sbjct: 155 THLFLHGNRIP-SVPE 169
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + + + VAVK+ + E E+MK I ++N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL-----------YSSNCILD---IFQRL-NI 527
++ ++ +C+ + +++E+ G+L + L Y N + + F+ L +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
+A +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 150 TYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++APE + DV+SFG+++ EI +
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 124
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 183 YYSTAVDIWSLGCIFAEM 200
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 414 RFSYLEVCRATYGFNEN----NLIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF 468
R + L +T+GF EN ++G+G + + E AVK+ + G +F +
Sbjct: 2 RDAALPGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE 61
Query: 469 DI---------ECEIMKSIH-YRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI 518
++ E +I++ + + N++++ + F LV + M G L L +
Sbjct: 62 EVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVT 120
Query: 519 LDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE 578
L + IM + V+ LH + ++H DLKP N+LLDD M L+DFG + L
Sbjct: 121 LSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--- 174
Query: 579 DQSMTQTQTLATIGYIAPE------------YGREGRVFANG 608
D + T Y+APE YG+E +++ G
Sbjct: 175 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG 216
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 123
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 182 YYSTAVDIWSLGCIFAEM 199
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 125
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 183
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 184 YYSTAVDIWSLGCIFAEM 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 124
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 183 YYSTAVDIWSLGCIFAEM 200
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 123
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 182 YYSTAVDIWSLGCIFAEM 199
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 123
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 124 HRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 182 YYSTAVDIWSLGCIFAEM 199
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMK-SIHYRNLVK 485
F +++G G GTI + D +VAVK +C F D E ++++ S + N+++
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIR 82
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ + +F+ + +E + +L++ + + + + ++ S L +LH +
Sbjct: 83 YFCTEKDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLN 138
Query: 546 VIHCDLKPSNVLLD-----DTMVAHLSDFGI-TKLLIGEDQSMTQTQTLATIGYIAPE 597
++H DLKP N+L+ + A +SDFG+ KL +G ++ T G+IAPE
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 122
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 181 YYSTAVDIWSLGCIFAEM 198
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 180 YYSTAVDIWSLGCIFAEM 197
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV EH+ L+K + ++ + I L I + +L+ L F
Sbjct: 68 VKLLDVIHTENKLYLVFEHVDQ-DLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 124
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 183 YYSTAVDIWSLGCIFAEM 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 180 YYSTAVDIWSLGCIFAEM 197
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 18/199 (9%)
Query: 432 LIGKGGFGTIYKSRIGDGMEV-AVKV---FHL--QCGRAFKSFDIECEIMKSIHYRNLVK 485
+IG+G FG + R +V A+K+ F + + AF F E +IM + +V+
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAFANSPWVVQ 133
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ + ++ + +V+E+MP G L L S+ + + + R +V L+ +H +
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH---SMG 188
Query: 546 VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE----YGRE 601
IH D+KP N+LLD + L+DFG + E T + T YI+PE G +
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGD 247
Query: 602 GRVFANGDVYSFGIMLMEI 620
G D +S G+ L E+
Sbjct: 248 GYYGRECDWWSVGVFLYEM 266
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 122
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 181 YYSTAVDIWSLGCIFAEM 198
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 122
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 181 YYSTAVDIWSLGCIFAEM 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 180 YYSTAVDIWSLGCIFAEM 197
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 120
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 179 YYSTAVDIWSLGCIFAEM 196
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 120
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 179 YYSTAVDIWSLGCIFAEM 196
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 18/199 (9%)
Query: 432 LIGKGGFGTIYKSRIGDGMEV-AVKV---FHL--QCGRAFKSFDIECEIMKSIHYRNLVK 485
+IG+G FG + R +V A+K+ F + + AF F E +IM + +V+
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAFANSPWVVQ 138
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ + ++ + +V+E+MP G L L S+ + + + R +V L+ +H +
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH---SMG 193
Query: 546 VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE----YGRE 601
IH D+KP N+LLD + L+DFG + E T + T YI+PE G +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGD 252
Query: 602 GRVFANGDVYSFGIMLMEI 620
G D +S G+ L E+
Sbjct: 253 GYYGRECDWWSVGVFLYEM 271
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 529 IDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTL 588
I +A+V H + +IH D+KPSN+LLD + L DFGI+ L+ S+ +T+
Sbjct: 130 ITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV---DSIAKTRDA 186
Query: 589 ATIGYIAPEY-----GREGRVFANGDVYSFGIMLMEIHSAK 624
Y+APE R+G DV+S GI L E+ + +
Sbjct: 187 GCRPYMAPERIDPSASRQG-YDVRSDVWSLGITLYELATGR 226
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 23/195 (11%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRNLVKIIS 488
IGKG F + +R I G EVA+K+ L K F E IMK +++ N+VK+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 78
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
E+ L++E+ G + L + + + R + S ++Y H ++H
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQK---RIVH 134
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATI----GYIAPEYGREGRV 604
DLK N+LLD M ++DFG + T L T Y APE +G+
Sbjct: 135 RDLKAENLLLDADMNIKIADFGFS-------NEFTVGGKLDTFCGSPPYAAPELF-QGKK 186
Query: 605 F--ANGDVYSFGIML 617
+ DV+S G++L
Sbjct: 187 YDGPEVDVWSLGVIL 201
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + +VAVK+ + E E+MK I ++N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL---------YSSNCILDIFQRLN------I 527
++ ++ +C+ + +++E+ G+L + L Y N + ++L+
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
VA +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 141 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ ++APE + DV+SFG++L EI
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 180 YYSTAVDIWSLGCIFAEM 197
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 412 WRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKSFDI 470
W+ V + T F + ++GKGGFG + ++ G A K + + K +
Sbjct: 173 WKWLERQPVTKNT--FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAM 230
Query: 471 ---ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYS-SNCILDIFQRLN 526
E +I++ ++ R +V + + ++ LVL M G L+ +Y + +
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ 586
++ LE LH +++ DLKP N+LLDD +SD G+ + + E Q++
Sbjct: 291 YAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTI--KG 344
Query: 587 TLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ T+GY+APE + R + D ++ G +L E+
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+ L S I E ++K +++ N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 180 YYSTAVDIWSLGCIFAEM 197
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+ L S I E ++K +++ N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L+K + ++ + I L I + +L+ L F
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFCHS 120
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T T + T+ Y APE +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 179 YYSTAVDIWSLGCIFAEM 196
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + +VAVK+ + E E+MK I ++N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL---------YSSNCILDIFQRLN------I 527
++ ++ +C+ + +++E+ G+L + L Y N + ++L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
VA +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ ++APE + DV+SFG++L EI
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEV-AVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F+ +GKG FG +Y +R + A+KV L+ E EI + + N
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
++++ + + + L+LE P G L K L + D + M ++A L Y H
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCHER- 134
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
VIH D+KP N+L+ ++DFG + S+ + T+ Y+ PE EG
Sbjct: 135 --KVIHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPPEMI-EG 187
Query: 603 RVFANG-DVYSFGIMLMEI 620
+ D++ G++ E
Sbjct: 188 KTHDEKVDLWCAGVLCYEF 206
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 106
Query: 485 -KIISSCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ L H+ L K L + + D +I + +L L +
Sbjct: 107 NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 161
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 162 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEV-AVKVF---HLQCGRAFKSFDIECEIMKSIHYRN 482
F+ +GKG FG +Y +R + A+KV L+ E EI + + N
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
++++ + + + L+LE P G L K L + D + M ++A L Y H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCHER- 133
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
VIH D+KP N+L+ ++DFG + S+ + T+ Y+ PE EG
Sbjct: 134 --KVIHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPPEMI-EG 186
Query: 603 RVFANG-DVYSFGIMLMEI 620
+ D++ G++ E
Sbjct: 187 KTHDEKVDLWCAGVLCYEF 205
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 34/222 (15%)
Query: 414 RFSYLEVCRATYGFNEN----NLIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF 468
R + L +T+GF EN ++G+G + + E AVK+ + G +F +
Sbjct: 2 RDAALPGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE 61
Query: 469 DI---------ECEIMKSIH-YRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI 518
++ E +I++ + + N++++ + F LV + M G L L +
Sbjct: 62 EVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVT 120
Query: 519 LDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE 578
L + IM + V+ LH + ++H DLKP N+LLDD M L+DFG + L
Sbjct: 121 LSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--- 174
Query: 579 DQSMTQTQTLATIGYIAPE------------YGREGRVFANG 608
D T Y+APE YG+E +++ G
Sbjct: 175 DPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG 216
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L K ++ + I L I + +L+ L F
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDL-KTFMDASALTGIPLPL-IKSYLFQLLQGLAFCHS 124
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 183 YYSTAVDIWSLGCIFAEM 200
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 412 WRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKSFDI 470
W+ V + T F + ++GKGGFG + ++ G A K + + K +
Sbjct: 173 WKWLERQPVTKNT--FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAM 230
Query: 471 ---ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYS-SNCILDIFQRLN 526
E +I++ ++ R +V + + ++ LVL M G L+ +Y + +
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ 586
++ LE LH +++ DLKP N+LLDD +SD G+ + + E Q++
Sbjct: 291 YAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTI--KG 344
Query: 587 TLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ T+GY+APE + R + D ++ G +L E+
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 22/201 (10%)
Query: 432 LIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKS--------FDIECEIMKSIHYRNL 483
+IG+G FG + R + + KV+ ++ F+ F E +IM + +
Sbjct: 82 VIGRGAFGEVQLVR----HKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV 137
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
V++ + ++++ +V+E+MP G L L S+ + + + + +V L+ +H
Sbjct: 138 VQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKF-YTAEVVLALDAIH---S 192
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE----YG 599
+ +IH D+KP N+LLD L+DFG T + + E + + T YI+PE G
Sbjct: 193 MGLIHRDVKPDNMLLDKHGHLKLADFG-TCMKMDETGMVHCDTAVGTPDYISPEVLKSQG 251
Query: 600 REGRVFANGDVYSFGIMLMEI 620
+G D +S G+ L E+
Sbjct: 252 GDGYYGRECDWWSVGVFLFEM 272
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + + + VAVK+ + E E+MK I ++N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL-----------YSSNCILD---IFQRL-NI 527
++ ++ +C+ + +++ + G+L + L Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
+A +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 588 LATIGYIAPEYGREGRVFAN-GDVYSFGIMLMEIHS 622
+ ++APE RV+ + DV+SFG+++ EI +
Sbjct: 220 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 432 LIGKGGFGTIYKSRIGDGMEV-AVKV---FHL--QCGRAFKSFDIECEIMKSIHYRNLVK 485
+IG+G FG + R +V A+K+ F + + AF F E +IM + +V+
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAFANSPWVVQ 138
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ + ++ + +V+E+MP G L L S+ + + + R +V L+ +H +
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH---SMG 193
Query: 546 VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE----YGRE 601
IH D+KP N+LLD + L+DFG T + + ++ + + T YI+PE G +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFG-TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 602 GRVFANGDVYSFGIMLMEI 620
G D +S G+ L E+
Sbjct: 253 GYYGRECDWWSVGVFLYEM 271
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 33/210 (15%)
Query: 434 GKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKS--IHYRNLVKIISS-- 489
+G FG ++K+++ + VAVK+F LQ ++++S E EI + + + NL++ I++
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQS---EREIFSTPGMKHENLLQFIAAEK 79
Query: 490 -CSNEEFK-ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP-- 545
SN E + L+ GSL Y I+ + ++ ++ L YLH + VP
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTD--YLKGNIITWNELCHVAETMSRGLSYLHED--VPWC 135
Query: 546 --------VIHCDLKPSNVLLDDTMVAHLSDFGIT-KLLIGEDQSMTQTQTLATIGYIAP 596
+ H D K NVLL + A L+DFG+ + G+ T Q + T Y+AP
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ-VGTRRYMAP 194
Query: 597 EYGREGRV------FANGDVYSFGIMLMEI 620
E EG + F D+Y+ G++L E+
Sbjct: 195 EV-LEGAINFQRDAFLRIDMYAMGLVLWEL 223
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKVF---HLQCGRAFKSFDIECEIMKSIHYRNLVKIIS 488
+GKG FG +Y +R + A+KV L+ E EI + + N++++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+ + L+LE P G L K L + D + M ++A L Y H VIH
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCHER---KVIH 137
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
D+KP N+L+ ++DFG + S+ + T+ Y+ PE EG+
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPPEMI-EGKTHDEK 192
Query: 609 -DVYSFGIMLMEI 620
D++ G++ E
Sbjct: 193 VDLWCAGVLCYEF 205
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 9/144 (6%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRNLVKIIS 488
IGKG F + +R I G EVA+K+ L K F E IMK +++ N+VK+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
E+ L++E+ G + L + + + R + S ++Y H ++H
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQK---RIVH 137
Query: 549 CDLKPSNVLLDDTMVAHLSDFGIT 572
DLK N+LLD M ++DFG +
Sbjct: 138 RDLKAENLLLDADMNIKIADFGFS 161
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F IG G FG + + G A+K+ Q K + E I++++++
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E+MP G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 425 YGFNENNL-----IGKGGFGTIYKSR-IGDGME-----VAVKVF----HLQCGRAFKSFD 469
+ F NNL +G G FG + ++ G G E VAVK+ H A S
Sbjct: 33 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS-- 90
Query: 470 IECEIMKSI-HYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCI---------L 519
E +IM + + N+V ++ +C++ ++ E+ +G L L L
Sbjct: 91 -ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 149
Query: 520 DIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579
++ L+ VA + +L IH D+ NVLL + VA + DFG+ + ++ +
Sbjct: 150 ELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 206
Query: 580 QSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ + + ++APE + DV+S+GI+L EI S
Sbjct: 207 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F IG G FG + + G A+K+ Q K + E I++++++
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E+MP G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 433 IGKGGFGTIY--------KSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRN 482
+G+G FG + K + + + VAVK+ + E E+MK I ++N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCL-----------YSSNCILD---IFQRL-NI 527
++ ++ +C+ + +++ + G+L + L Y N + + F+ L +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
+A +EYL IH DL NVL+ + V ++DFG+ + + D T
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 588 LATIGYIAPEYGREGRVFAN-GDVYSFGIMLMEIHS 622
+ ++APE RV+ + DV+SFG+++ EI +
Sbjct: 220 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 31/226 (13%)
Query: 425 YGFNENNL-----IGKGGFGTIYKSR-IGDGME-----VAVKVF----HLQCGRAFKSFD 469
+ F NNL +G G FG + ++ G G E VAVK+ H A S
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS-- 98
Query: 470 IECEIMKSI-HYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCL---------YSSNCIL 519
E +IM + + N+V ++ +C++ ++ E+ +G L L YS N
Sbjct: 99 -ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSH 157
Query: 520 DIFQRL---NIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576
+ ++L +++ + V + + F IH D+ NVLL + VA + DFG+ + ++
Sbjct: 158 NPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 217
Query: 577 GEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ + + + ++APE + DV+S+GI+L EI S
Sbjct: 218 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYRNLVKIIS 488
IGKG F + +R I G EVAVK+ L K F E I K +++ N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFE 80
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
E+ LV E+ G + L + + R + S ++Y H F+V H
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKFIV---H 136
Query: 549 CDLKPSNVLLDDTMVAHLSDFGIT 572
DLK N+LLD ++DFG +
Sbjct: 137 RDLKAENLLLDADXNIKIADFGFS 160
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 433 IGKGGFGTIYKS------RIGDGMEVAVKVFHLQCGRA-FKSFDIECEIMKSI-HYRNLV 484
+G+G FG + ++ + VAVK+ + ++ E +I+ I H+ N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 485 KIISSCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
++ +C+ +V+ E G+L L S ++ ++ D ++ + ++F
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 544 VP----------VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGY 593
V IH DL N+LL + V + DFG+ + + + + + + +
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKW 216
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+APE + DV+SFG++L EI S
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 24/211 (11%)
Query: 427 FNENNLIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDI-ECEIMKSIHYRNLV 484
F + +G G + T+YK G+ VA+K L S I E +MK + + N+V
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIV 66
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNC----------ILDIFQRLNIMIDVASV 534
++ E LV E M L+K + S ++ FQ +
Sbjct: 67 RLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQ--------WQL 117
Query: 535 LEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYI 594
L+ L F ++H DLKP N+L++ L DFG+ + T + + T+ Y
Sbjct: 118 LQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF--GIPVNTFSSEVVTLWYR 175
Query: 595 APEYGREGRVFANG-DVYSFGIMLMEIHSAK 624
AP+ R ++ D++S G +L E+ + K
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTL-ATIGYIAPEYGRE 601
+ +I+ DLKP N+L+D ++DFG K + G +T TL T Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAPEIILS 213
Query: 602 GRVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 KGYNKAVDWWALGVLIYEM 232
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 425 YGFNENNL-----IGKGGFGTIYKSR-IGDGME-----VAVKVF----HLQCGRAFKSFD 469
+ F NNL +G G FG + ++ G G E VAVK+ H A S
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS-- 98
Query: 470 IECEIMKSI-HYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLY-SSNCILDI-----F 522
E +IM + + N+V ++ +C++ ++ E+ +G L L + LD
Sbjct: 99 -ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 157
Query: 523 QRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSM 582
+ +++ + V + + F IH D+ NVLL + VA + DFG+ + ++ + +
Sbjct: 158 ELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 217
Query: 583 TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ + ++APE + DV+S+GI+L EI S
Sbjct: 218 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 144
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTL-ATIGYIAPEYGRE 601
+ +I+ DLKP N+L+D ++DFG K + G +T TL T Y+APE
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAPEIILS 198
Query: 602 GRVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 199 KGYNKAVDWWALGVLIYEM 217
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + + N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLAFRHENIIGI 88
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 143
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 141
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 12/194 (6%)
Query: 433 IGKGGFGT----IYKSRIGDGMEVAVKVF-HLQCGRAFKSFDIECEIMKSIHYRNLVKII 487
IG+G FG IY S M VA+K + + F E M+ + ++VK+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ E +++E G L L LD+ + +++ L YL V
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFV--- 133
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQ-TQTLATIGYIAPEYGREGRVFA 606
H D+ NVL+ T L DFG+++ + ED + + ++ I ++APE R +
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 607 NGDVYSFGIMLMEI 620
DV+ FG+ + EI
Sbjct: 192 ASDVWMFGVCMWEI 205
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 145
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + + N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLAFRHENIIGI 88
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 143
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 144 SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 94/226 (41%), Gaps = 31/226 (13%)
Query: 422 RATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHY 480
R F E ++G+G FG + K+R D A+K + E ++ S+++
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 481 -------------RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNI 527
RN VK +++ + + +E+ + +L ++S N + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITK-------LLIGEDQ 580
+ L Y+H +IH DLKP N+ +D++ + DFG+ K +L + Q
Sbjct: 122 FRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 581 SM-----TQTQTLATIGYIAPEY-GREGRVFANGDVYSFGIMLMEI 620
++ T + T Y+A E G D+YS GI+ E+
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 141
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 141
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 29/206 (14%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKI 486
F + + IGKG FG +YK EV A K D+E + + + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVV----------AIKIIDLEEAEDEIEDIQQEITV 70
Query: 487 ISSCSNEEFKE------------LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV 534
+S C + +++E++ GS L L+ I+ ++
Sbjct: 71 LSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP--LEETYIATILREILKG 128
Query: 535 LEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYI 594
L+YLH IH D+K +NVLL + L+DFG+ L D + + + T ++
Sbjct: 129 LDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNXFVGTPFWM 183
Query: 595 APEYGREGRVFANGDVYSFGIMLMEI 620
APE ++ D++S GI +E+
Sbjct: 184 APEVIKQSAYDFKADIWSLGITAIEL 209
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + H L K ++ + I L I + +L+ L F
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDL-KDFMDASALTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 180 YYSTAVDIWSLGCIFAEM 197
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 29/180 (16%)
Query: 451 EVAVKVFHLQCGRAFKSFDI---------ECEIMKSIH-YRNLVKIISSCSNEEFKELVL 500
E AVK+ + G +F + ++ E +I++ + + N++++ + F LV
Sbjct: 31 EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVF 90
Query: 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDD 560
+ M G L L + L + IM + V+ LH + ++H DLKP N+LLDD
Sbjct: 91 DLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDD 146
Query: 561 TMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE------------YGREGRVFANG 608
M L+DFG + L D + T Y+APE YG+E +++ G
Sbjct: 147 DMNIKLTDFGFSCQL---DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG 203
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISS 489
+GKG F + + ++ G E A + + + R + + E I + + + N+V++ S
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
S E L+ + + G L + + + + + +LE + + V+H
Sbjct: 79 ISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHR 134
Query: 550 DLKPSNVLLDDTM---VAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFA 606
+LKP N+LL + L+DFG+ + GE Q+ T GY++PE R+
Sbjct: 135 NLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKDPYGK 192
Query: 607 NGDVYSFGIML 617
D+++ G++L
Sbjct: 193 PVDLWACGVIL 203
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 8/189 (4%)
Query: 433 IGKGGFGTI-YKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
IG+G G + + G +VAVK L+ + + E IM+ H+ N+V + SS
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
+ +V+E + G+L + ++ ++ Q + + V L YLH VIH D+
Sbjct: 113 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDI 167
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVY 611
K ++LL LSDFG + E + + T ++APE D++
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVSKE--VPKRKXLVGTPYWMAPEVISRLPYGTEVDIW 225
Query: 612 SFGIMLMEI 620
S GIM++E+
Sbjct: 226 SLGIMVIEM 234
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 94
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 95 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 149
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 150 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 209
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 210 SKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 141
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 427 FNENNLIGKGGFGTIY--KSRIGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYR 481
+ ++GKG FG + K +I G E AVKV ++ +S E +++K + +
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 482 NLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFN 541
N++K+ ++ + LV E G L + S ++ I+ V S + Y+H N
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYMHKN 151
Query: 542 FLVPVIHCDLKPSNVLLDDTMVA---HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
++H DLKP N+LL+ + DFG++ + S + T YIAPE
Sbjct: 152 ---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPEV 205
Query: 599 GREGRVFANGDVYSFGIML 617
G DV+S G++L
Sbjct: 206 -LHGTYDEKCDVWSTGVIL 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 84
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 85 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 139
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 91
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 92 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 146
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 206
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 92
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 93 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 147
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 148 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 207
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 208 SKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 83
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 84 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 138
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 139 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 198
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 199 SKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 145
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 427 FNENNLIGKGGFGTIY--KSRIGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYR 481
+ ++GKG FG + K +I G E AVKV ++ +S E +++K + +
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 482 NLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFN 541
N++K+ ++ + LV E G L + S ++ I+ V S + Y+H N
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYMHKN 169
Query: 542 FLVPVIHCDLKPSNVLLDDTMVA---HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
++H DLKP N+LL+ + DFG++ + S + T YIAPE
Sbjct: 170 ---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPEV 223
Query: 599 GREGRVFANGDVYSFGIML 617
G DV+S G++L
Sbjct: 224 -LHGTYDEKCDVWSTGVIL 241
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 86
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 141
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 24/207 (11%)
Query: 434 GKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISS---- 489
+G FG ++K+++ + VAVK+F +Q +++++ + E + + + N+++ I +
Sbjct: 33 ARGRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRG 90
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF------L 543
S + L+ GSL L ++ ++ + +I +A L YLH +
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 544 VPVI-HCDLKPSNVLLDDTMVAHLSDFGIT-KLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
P I H D+K NVLL + + A ++DFG+ K G+ T Q + T Y+APE E
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ-VGTRRYMAPEV-LE 206
Query: 602 GRV------FANGDVYSFGIMLMEIHS 622
G + F D+Y+ G++L E+ S
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 88
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 143
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 12/194 (6%)
Query: 433 IGKGGFGT----IYKSRIGDGMEVAVKVF-HLQCGRAFKSFDIECEIMKSIHYRNLVKII 487
IG+G FG IY S M VA+K + + F E M+ + ++VK+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ E +++E G L L LD+ + +++ L YL V
Sbjct: 458 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFV--- 513
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQ-TQTLATIGYIAPEYGREGRVFA 606
H D+ NVL+ T L DFG+++ + ED + + ++ I ++APE R +
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 607 NGDVYSFGIMLMEI 620
DV+ FG+ + EI
Sbjct: 572 ASDVWMFGVCMWEI 585
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 84
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 85 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 139
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 106
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 107 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 161
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 162 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 427 FNENNLIGKGGFGTIY--KSRIGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYR 481
+ ++GKG FG + K +I G E AVKV ++ +S E +++K + +
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 482 NLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFN 541
N++K+ ++ + LV E G L + S ++ I+ V S + Y+H N
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYMHKN 168
Query: 542 FLVPVIHCDLKPSNVLLDDTMVA---HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
++H DLKP N+LL+ + DFG++ + S + T YIAPE
Sbjct: 169 ---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPEV 222
Query: 599 GREGRVFANGDVYSFGIML 617
G DV+S G++L
Sbjct: 223 -LHGTYDEKCDVWSTGVIL 240
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEK---CLYSSNCILDIFQRLNIMIDVASVLEYLH 539
II + + E+ K++ +++ + L K C + SN + F + + L+Y+H
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYF-----LYQILRGLKYIH 145
Query: 540 FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEY 598
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 146 S---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 599 GREGRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 159
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 214
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 215 GYNKAVDWWALGVLIYEM 232
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 433 IGKGGFGT----IYKSRIGDGMEVAVKVF-HLQCGRAFKSFDIECEIMKSIHYRNLVKII 487
IG+G FG IY S M VA+K + + F E M+ + ++VK+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ E +++E G L L LD+ + +++ L YL V
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFV--- 133
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQ-TQTLATIGYIAPEYGREGRVFA 606
H D+ NVL+ L DFG+++ + ED + + ++ I ++APE R +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTXXKASKGKLPIKWMAPESINFRRFTS 191
Query: 607 NGDVYSFGIMLMEI 620
DV+ FG+ + EI
Sbjct: 192 ASDVWMFGVCMWEI 205
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 151
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 206
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 207 GYNKAVDWWALGVLIYEM 224
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + G A+K+ Q K + E I++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 25/207 (12%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYR--NLVKIISS- 489
+GKG +G +++ + G VAVK+F R +S+ E EI ++ R N++ I+S
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIF---SSRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 490 -CSNEEFKELVL--EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL--- 543
S +L L + HGSL L L+ L + + A L +LH
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQT--LEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 544 -VPVI-HCDLKPSNVLLDDTMVAHLSDFGITKLL-IGEDQ-SMTQTQTLATIGYIAPEYG 599
P I H D K NVL+ + ++D G+ + G D + + T Y+APE
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 600 REG------RVFANGDVYSFGIMLMEI 620
E + D+++FG++L EI
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 427 FNENNLIGKGGFGTIY--KSRIGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYR 481
+ ++GKG FG + K +I G E AVKV ++ +S E +++K + +
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 482 NLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFN 541
N++K+ ++ + LV E G L + S ++ I+ V S + Y+H N
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYMHKN 145
Query: 542 FLVPVIHCDLKPSNVLLDDTMVA---HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
++H DLKP N+LL+ + DFG++ + S + T YIAPE
Sbjct: 146 ---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPEV 199
Query: 599 GREGRVFANGDVYSFGIML 617
G DV+S G++L
Sbjct: 200 -LHGTYDEKCDVWSTGVIL 217
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F IG G FG + + G A+K+ Q K + E I++++++
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 30/163 (18%)
Query: 469 DIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSL------EKCLYSSNCILDIF 522
+ E EI+K +++ ++KI + E++ +VLE M G L K L + C L +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 523 QRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFGITKLLIGED 579
Q L ++YLH N +IH DLKP NVLL ++ + ++DFG +K+L GE
Sbjct: 122 QML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 170
Query: 580 QSMTQTQTL-ATIGYIAPE----YGREGRVFANGDVYSFGIML 617
M +TL T Y+APE G G A D +S G++L
Sbjct: 171 SLM---RTLCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVIL 209
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 30/164 (18%)
Query: 469 DIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSL------EKCLYSSNCILDIF 522
+ E EI+K +++ ++KI + E++ +VLE M G L K L + C L +
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 523 QRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFGITKLLIGED 579
Q L ++YLH N +IH DLKP NVLL ++ + ++DFG +K+L GE
Sbjct: 247 QML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 295
Query: 580 QSMTQTQTL-ATIGYIAPE----YGREGRVFANGDVYSFGIMLM 618
M +TL T Y+APE G G A D +S G++L
Sbjct: 296 SLM---RTLCGTPTYLAPEVLVSVGTAGYNRA-VDCWSLGVILF 335
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 30/163 (18%)
Query: 469 DIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSL------EKCLYSSNCILDIF 522
+ E EI+K +++ ++KI + E++ +VLE M G L K L + C L +
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 523 QRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFGITKLLIGED 579
Q L ++YLH N +IH DLKP NVLL ++ + ++DFG +K+L GE
Sbjct: 128 QML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 176
Query: 580 QSMTQTQTL-ATIGYIAPE----YGREGRVFANGDVYSFGIML 617
M +TL T Y+APE G G A D +S G++L
Sbjct: 177 SLM---RTLCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVIL 215
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 30/164 (18%)
Query: 469 DIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSL------EKCLYSSNCILDIF 522
+ E EI+K +++ ++KI + E++ +VLE M G L K L + C L +
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 523 QRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFGITKLLIGED 579
Q L ++YLH N +IH DLKP NVLL ++ + ++DFG +K+L GE
Sbjct: 261 QML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 309
Query: 580 QSMTQTQTL-ATIGYIAPE----YGREGRVFANGDVYSFGIMLM 618
M +TL T Y+APE G G A D +S G++L
Sbjct: 310 SLM---RTLCGTPTYLAPEVLVSVGTAGYNRA-VDCWSLGVILF 349
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 30/163 (18%)
Query: 469 DIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSL------EKCLYSSNCILDIF 522
+ E EI+K +++ ++KI + E++ +VLE M G L K L + C L +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 523 QRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFGITKLLIGED 579
Q L ++YLH N +IH DLKP NVLL ++ + ++DFG +K+L GE
Sbjct: 122 QML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 170
Query: 580 QSMTQTQTL-ATIGYIAPE----YGREGRVFANGDVYSFGIML 617
M +TL T Y+APE G G A D +S G++L
Sbjct: 171 SLM---RTLCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVIL 209
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 30/163 (18%)
Query: 469 DIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSL------EKCLYSSNCILDIF 522
+ E EI+K +++ ++KI + E++ +VLE M G L K L + C L +
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 523 QRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFGITKLLIGED 579
Q L ++YLH N +IH DLKP NVLL ++ + ++DFG +K+L GE
Sbjct: 121 QML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 169
Query: 580 QSMTQTQTL-ATIGYIAPE----YGREGRVFANGDVYSFGIML 617
M +TL T Y+APE G G A D +S G++L
Sbjct: 170 SLM---RTLCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVIL 208
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 30/163 (18%)
Query: 469 DIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSL------EKCLYSSNCILDIF 522
+ E EI+K +++ ++KI + E++ +VLE M G L K L + C L +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 523 QRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFGITKLLIGED 579
Q L ++YLH N +IH DLKP NVLL ++ + ++DFG +K+L GE
Sbjct: 122 QML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 170
Query: 580 QSMTQTQTL-ATIGYIAPE----YGREGRVFANGDVYSFGIML 617
M +TL T Y+APE G G A D +S G++L
Sbjct: 171 SLM---RTLCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVIL 209
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 431 NLIGKGGFGTIYKSRIGDG--------MEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRN 482
++GKGG+G +++ R G M+V K ++ + E I++ + +
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+V +I + L+LE++ G L L ++ + +++ L +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLHQK- 140
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE-YGRE 601
+I+ DLKP N++L+ L+DFG+ K I D ++T T TI Y+APE R
Sbjct: 141 --GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI-HDGTVTHT-FCGTIEYMAPEILMRS 196
Query: 602 GRVFANGDVYSFGIMLMEI 620
G A D +S G ++ ++
Sbjct: 197 GHNRAV-DWWSLGALMYDM 214
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 14/202 (6%)
Query: 422 RATYGFNENNLIGKGGFGTIYKSRIGDGMEV----AVKVFHLQCGRAFKSFDIECEIMKS 477
R + +GKGGF Y+ D EV V L + E I KS
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 478 IHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEY 537
+ ++V +++F +VLE SL + + + R + + V +Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV-QY 157
Query: 538 LHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGI-TKLLIGEDQSMTQTQTLATIGYIAP 596
LH N VIH DLK N+ L+D M + DFG+ TK+ ++ T T YIAP
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT---LCGTPNYIAP 211
Query: 597 EY-GREGRVFANGDVYSFGIML 617
E ++G F D++S G +L
Sbjct: 212 EVLCKKGHSF-EVDIWSLGCIL 232
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA++ F Q C R + E +I+ + N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 145
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 433 IGKGGFGT----IYKSRIGDGMEVAVKVF-HLQCGRAFKSFDIECEIMKSIHYRNLVKII 487
IG+G FG IY S M VA+K + + F E M+ + ++VK+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ E +++E G L L LD+ + +++ L YL V
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV--- 133
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQ-TQTLATIGYIAPEYGREGRVFA 606
H D+ NVL+ L DFG+++ + ED + + ++ I ++APE R +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 607 NGDVYSFGIMLMEI 620
DV+ FG+ + EI
Sbjct: 192 ASDVWMFGVCMWEI 205
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + S++ + L I + +L+ L F
Sbjct: 68 VKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 125 HRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 183 YYSTAVDIWSLGCIFAEM 200
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 214
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 215 GYNKAVDWWALGVLIYEM 232
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + G A+K+ Q K + E I++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 151
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 206
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 207 GYNKAVDWWALGVLIYEM 224
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 179
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEI---- 230
Query: 603 RVFANG-----DVYSFGIMLMEI 620
+ + G D ++ G+++ E+
Sbjct: 231 -ILSKGYNKAVDWWALGVLIYEM 252
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 432 LIGKGGFGTIYK--SRIGDGMEVAVKVFHLQCGRAFKSFDI--ECEIMKSIHYRNLVKII 487
++GKG FG + K RI E AVKV + + + I E E++K + + N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQ-QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD-IFQR--------LNIMIDVASVLEYL 538
+LE + LY+ + D I +R I+ V S + Y+
Sbjct: 88 E----------ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 539 HFNFLVPVIHCDLKPSNVLLDDTMVA---HLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
H + ++H DLKP N+LL+ + DFG++ Q+ + T YIA
Sbjct: 138 HKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIA 191
Query: 596 PEYGREGRVFANGDVYSFGIML 617
PE R G DV+S G++L
Sbjct: 192 PEVLR-GTYDEKCDVWSAGVIL 212
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 214
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 215 GYNKAVDWWALGVLIYEM 232
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + G A+K+ Q K + E I++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + G A+K+ Q K + E I++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 12/201 (5%)
Query: 422 RATYGFNENNLIGKGGFGTIYKSRIGDGMEV----AVKVFHLQCGRAFKSFDIECEIMKS 477
R + +GKGGF Y+ D EV V L + E I KS
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 478 IHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEY 537
+ ++V +++F +VLE SL + + + R + + V +Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV-QY 157
Query: 538 LHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE 597
LH N VIH DLK N+ L+D M + DFG+ + E + T YIAPE
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAPE 212
Query: 598 Y-GREGRVFANGDVYSFGIML 617
++G F D++S G +L
Sbjct: 213 VLCKKGHSF-EVDIWSLGCIL 232
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
VK++ E LV E + S++ + L I + +L+ L F
Sbjct: 66 VKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE +
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 604 VFANG-DVYSFGIMLMEI 620
++ D++S G + E+
Sbjct: 181 YYSTAVDIWSLGCIFAEM 198
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 11/199 (5%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLE-KCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK++ E LV E + S++ K ++ + I L I + +L+ L F
Sbjct: 68 VKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPL-IKSYLFQLLQGLAFCH 123
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 603 RVFANG-DVYSFGIMLMEI 620
+ ++ D++S G + E+
Sbjct: 182 KYYSTAVDIWSLGCIFAEM 200
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 214
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 215 GYNKAVDWWALGVLIYEM 232
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++P G + L + R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 214
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 215 GYNKAVDWWALGVLIYEM 232
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 12/201 (5%)
Query: 422 RATYGFNENNLIGKGGFGTIYKSRIGDGMEV----AVKVFHLQCGRAFKSFDIECEIMKS 477
R + +GKGGF Y+ D EV V L + E I KS
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 478 IHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEY 537
+ ++V +++F +VLE SL + + + R + + V +Y
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV-QY 141
Query: 538 LHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE 597
LH N VIH DLK N+ L+D M + DFG+ + E + T YIAPE
Sbjct: 142 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAPE 196
Query: 598 Y-GREGRVFANGDVYSFGIML 617
++G F D++S G +L
Sbjct: 197 VLCKKGHSF-EVDIWSLGCIL 216
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 8/189 (4%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
IG+G G + +R G +VAVK+ L+ + + E IM+ + N+V++ S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
E +++E + G+L + S L+ Q + V L YLH VIH D+
Sbjct: 113 VGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDI 167
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVY 611
K ++LL LSDFG I +D + + T ++APE D++
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCA-QISKDVP-KRKXLVGTPYWMAPEVISRSLYATEVDIW 225
Query: 612 SFGIMLMEI 620
S GIM++E+
Sbjct: 226 SLGIMVIEM 234
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 87/195 (44%), Gaps = 9/195 (4%)
Query: 425 YGFNENNLIGKGGFGTIYK-SRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNL 483
Y ++ ++G G FG ++K G+++A K+ + + + E +M + + NL
Sbjct: 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANL 148
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
+++ + ++ LV+E++ G L + + L + M + + ++H +
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY- 207
Query: 544 VPVIHCDLKPSNVLL--DDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
++H DLKP N+L D + DFG+ + ++ T ++APE
Sbjct: 208 --ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV---NFGTPEFLAPEVVNY 262
Query: 602 GRVFANGDVYSFGIM 616
V D++S G++
Sbjct: 263 DFVSFPTDMWSVGVI 277
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 11/199 (5%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDI-ECEIMKSIHYRNL 483
F + IG+G +G +YK+R G VA+K L S I E ++K +++ N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 484 VKIISSCSNEEFKELVLEHMPHGSLE-KCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
VK++ E LV E + S++ K ++ + I L I + +L+ L F
Sbjct: 67 VKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPL-IKSYLFQLLQGLAFCH 122
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
V+H DLKP N+L++ L+DFG+ + T + T+ Y APE
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 603 RVFANG-DVYSFGIMLMEI 620
+ ++ D++S G + E+
Sbjct: 181 KYYSTAVDIWSLGCIFAEM 199
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 29/225 (12%)
Query: 422 RATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGR-AFKSFDIECEIMKSIH 479
R F +G+GGFG +++++ D A+K L A + E + + +
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 480 YRNLVKIISSCSNEEFKELVLEHMPHGSLE-----------KCLYSSNCILDIFQR---L 525
+ +V+ ++ + E + P L K + C ++ +R L
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 526 NIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMT-- 583
+I + +A +E+LH L +H DLKPSN+ V + DFG+ + +++ T
Sbjct: 122 HIFLQIAEAVEFLHSKGL---MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 584 --------QTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
T + T Y++PE D++S G++L E+
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 129
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 189
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 190 DVWSCGIVL 198
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 41/212 (19%)
Query: 433 IGKGGFGTI---YKSRIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNL 483
+G G +G++ Y +R+ +VAVK + R F+S E ++K + + N+
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVK----KLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 484 VKIIS----SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+ ++ + S E+F E+ L G+ + S + D ++ V +L L
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSD----EHVQFLVYQLLRGLK 145
Query: 540 FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYG 599
+ +IH DLKPSNV +++ + DFG+ + D+ MT GY+A +
Sbjct: 146 YIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMT--------GYVATRWY 194
Query: 600 REGRVFANG-------DVYSFGIMLMEIHSAK 624
R + N D++S G ++ E+ K
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 39/207 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ S + G+++AVK + R F+S E ++K + + N++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 114
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 115 LLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 172
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 173 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 218
Query: 601 EGRVFANG-------DVYSFGIMLMEI 620
+ N D++S G ++ E+
Sbjct: 219 APEIMLNWMHYNMTVDIWSVGCIMAEL 245
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 128
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 189 DVWSCGIVL 197
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 12/201 (5%)
Query: 422 RATYGFNENNLIGKGGFGTIYKSRIGDGMEV----AVKVFHLQCGRAFKSFDIECEIMKS 477
R + +GKGGF Y+ D EV V L + E I KS
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 478 IHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEY 537
+ ++V +++F +VLE SL + + + R + + V +Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGV-QY 157
Query: 538 LHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE 597
LH N VIH DLK N+ L+D M + DFG+ + E + T YIAPE
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKXLCGTPNYIAPE 212
Query: 598 Y-GREGRVFANGDVYSFGIML 617
++G F D++S G +L
Sbjct: 213 VLCKKGHSF-EVDIWSLGCIL 232
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 427 FNENNLIGKGGFGTIY--KSRIGDGMEVAVKVF---HLQCGRAFKSFDIECEIMKSIHYR 481
+ ++GKG FG + K +I G E AVKV ++ +S E +++K + +
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 482 NLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFN 541
N+ K+ ++ + LV E G L + S ++ I+ V S + Y H N
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYXHKN 145
Query: 542 FLVPVIHCDLKPSNVLLDDTMVA---HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
++H DLKP N+LL+ + DFG++ + S + T YIAPE
Sbjct: 146 ---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXKDKIGTAYYIAPEV 199
Query: 599 GREGRVFANGDVYSFGIML 617
G DV+S G++L
Sbjct: 200 -LHGTYDEKCDVWSTGVIL 217
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 22/197 (11%)
Query: 430 NNLIGKGGFGTIY-----KSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLV 484
N IG+G +G + +RI + K F R F E EIMKS+ + N++
Sbjct: 31 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDR----FKQEIEIMKSLDHPNII 86
Query: 485 KIISSCSNEEFKELVLEHMPHGSL-EKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
++ + + LV+E G L E+ ++ + IM DV S + Y H
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCH---K 141
Query: 544 VPVIHCDLKPSNVL-LDDTMVAHLS--DFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+ V H DLKP N L L D+ + L DFG+ + M +T+ + T Y++P+
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTK-VGTPYYVSPQV-L 197
Query: 601 EGRVFANGDVYSFGIML 617
EG D +S G+M+
Sbjct: 198 EGLYGPECDEWSAGVMM 214
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 22/197 (11%)
Query: 430 NNLIGKGGFGTIY-----KSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLV 484
N IG+G +G + +RI + K F R F E EIMKS+ + N++
Sbjct: 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDR----FKQEIEIMKSLDHPNII 69
Query: 485 KIISSCSNEEFKELVLEHMPHGSL-EKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
++ + + LV+E G L E+ ++ + IM DV S + Y H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCH---K 124
Query: 544 VPVIHCDLKPSNVL-LDDTMVAHLS--DFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+ V H DLKP N L L D+ + L DFG+ + M +T+ + T Y++P+
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTK-VGTPYYVSPQV-L 180
Query: 601 EGRVFANGDVYSFGIML 617
EG D +S G+M+
Sbjct: 181 EGLYGPECDEWSAGVMM 197
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 128
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 189 DVWSCGIVL 197
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGDGME---VAVKV---FHLQ--CGRAFKSFDIECEIMKSI 478
+ + IG+G +G + S D + VA+K F Q C R + E +I+
Sbjct: 45 YTQLQYIGEGAYGMV--SSAYDHVRKTRVAIKKISPFEHQTYCQRTLR----EIQILLRF 98
Query: 479 HYRNLV---KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV 534
+ N++ I+ + + E +++ +++ + L K L S D +I + +
Sbjct: 99 RHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSND-----HICYFLYQI 153
Query: 535 LEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGY 593
L L + V+H DLKPSN+L++ T + DFG+ ++ E D + T+ +AT Y
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWY 213
Query: 594 IAPEYGREGRVFANG-DVYSFGIMLMEIHSAK 624
APE + + D++S G +L E+ S +
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 433 IGKGGFGT----IYKSRIGDGMEVAVKVF-HLQCGRAFKSFDIECEIMKSIHYRNLVKII 487
IG+G FG IY S M VA+K + + F E M+ + ++VK+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ E +++E G L L LD+ + +++ L YL V
Sbjct: 458 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFV--- 513
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQ-TQTLATIGYIAPEYGREGRVFA 606
H D+ NVL+ L DFG+++ + ED + + ++ I ++APE R +
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 607 NGDVYSFGIMLMEI 620
DV+ FG+ + EI
Sbjct: 572 ASDVWMFGVCMWEI 585
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + G A+K+ Q K + E I++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E+ P G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+++D ++DFG+ K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + S D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDSELKILDFGLCR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 90
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 145
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + + +AT Y APE
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 205
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKV---FHLQ--CGRAFKSFDIECEIMKSIHYRNLV-- 484
IG+G +G + + + + VA+K F Q C R + E +I+ + N++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFRHENIIGI 91
Query: 485 -KIISSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
II + + E+ K++ +++ + L K L + + D +I + +L L +
Sbjct: 92 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIH 146
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGRE 601
V+H DLKPSN+LL+ T + DFG+ ++ + D + + +AT Y APE
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 206
Query: 602 GRVFANG-DVYSFGIMLMEIHSAK 624
+ + D++S G +L E+ S +
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 433 IGKGGFGTIYKS------RIGDGMEVAVKVFHLQCGRA-FKSFDIECEIMKSI-HYRNLV 484
+G+G FG + ++ + VAVK+ + ++ E +I+ I H+ N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 485 KIISSCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
++ +C+ +V+ E G+L L S ++ ++ D ++ + ++F
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK--DLYKDFLTLEHLIXYSFQ 152
Query: 544 VP----------VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGY 593
V IH DL N+LL + V + DFG+ + + + + + + +
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKW 212
Query: 594 IAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+APE + DV+SFG++L EI S
Sbjct: 213 MAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 39/203 (19%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNL------VK 485
+G+G FG + + G +VA+K+ + + D++ I + I Y L +K
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIIN---KKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD-IFQR--------LNIMIDVASVLE 536
+ +++ +V+E Y+ N + D I QR + S +E
Sbjct: 78 LYDVIKSKDEIIMVIE-----------YAGNELFDYIVQRDKMSEQEARRFFQQIISAVE 126
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
Y H + ++H DLKP N+LLD+ + ++DFG++ ++ D + +T + + Y AP
Sbjct: 127 YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAP 180
Query: 597 EYGREGRVFANG--DVYSFGIML 617
E G+++A DV+S G++L
Sbjct: 181 EV-ISGKLYAGPEVDVWSCGVIL 202
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 39/203 (19%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNL------VK 485
+G+G FG + + G +VA+K+ + + D++ I + I Y L +K
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIIN---KKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD-IFQR--------LNIMIDVASVLE 536
+ +++ +V+E Y+ N + D I QR + S +E
Sbjct: 79 LYDVIKSKDEIIMVIE-----------YAGNELFDYIVQRDKMSEQEARRFFQQIISAVE 127
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
Y H + ++H DLKP N+LLD+ + ++DFG++ ++ D + +T + + Y AP
Sbjct: 128 YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAP 181
Query: 597 EYGREGRVFANG--DVYSFGIML 617
E G+++A DV+S G++L
Sbjct: 182 EV-ISGKLYAGPEVDVWSCGVIL 203
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + + G A+K+ Q K + E I +++++
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPF 103
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +VLE+ P G + L + R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEI---- 210
Query: 603 RVFANG-----DVYSFGIMLMEI 620
+ + G D ++ G+++ E+
Sbjct: 211 -ILSKGYNKAVDWWALGVLIYEM 232
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 30/205 (14%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVK-----VFHLQCGRAFKSFDIECEIMKSIHYRNLVKI 486
+G+G +G + K R + G +AVK V + R DI M+++ V
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS---MRTVDCPFTVTF 115
Query: 487 ISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRL------NIMIDVASVLEYLHF 540
+ E + +E M SL+K Y ++D Q + I + + LE+LH
Sbjct: 116 YGALFREGDVWICMELM-DTSLDK-FYKQ--VIDKGQTIPEDILGKIAVSIVKALEHLHS 171
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY-- 598
+ VIH D+KPSNVL++ + DFGI+ L+ S+ +T Y+APE
Sbjct: 172 K--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLV---DSVAKTIDAGCKPYMAPERIN 226
Query: 599 ---GREGRVFANGDVYSFGIMLMEI 620
++G D++S GI ++E+
Sbjct: 227 PELNQKG-YSVKSDIWSLGITMIEL 250
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + G A+K+ Q K + E I++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E+ P G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+++D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 39/203 (19%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNL------VK 485
+G+G FG + + G +VA+K+ + + D++ I + I Y L +K
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIIN---KKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD-IFQR--------LNIMIDVASVLE 536
+ +++ +V+E Y+ N + D I QR + S +E
Sbjct: 69 LYDVIKSKDEIIMVIE-----------YAGNELFDYIVQRDKMSEQEARRFFQQIISAVE 117
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
Y H + ++H DLKP N+LLD+ + ++DFG++ ++ D + +T + + Y AP
Sbjct: 118 YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAP 171
Query: 597 EYGREGRVFANG--DVYSFGIML 617
E G+++A DV+S G++L
Sbjct: 172 EV-ISGKLYAGPEVDVWSCGVIL 193
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 432 LIGKGGFGTIYK--SRIGDGMEVAVKVFHLQCGRAFKSFDI--ECEIMKSIHYRNLVKII 487
++GKG FG + K RI E AVKV + + + I E E++K + + N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQ-QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD-IFQR--------LNIMIDVASVLEYL 538
+LE + LY+ + D I +R I+ V S + Y+
Sbjct: 88 E----------ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 539 HFNFLVPVIHCDLKPSNVLLDDTMVA---HLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
H + ++H DLKP N+LL+ + DFG++ Q+ + T YIA
Sbjct: 138 HKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIA 191
Query: 596 PEYGREGRVFANGDVYSFGIML 617
PE R G DV+S G++L
Sbjct: 192 PEVLR-GTYDEKCDVWSAGVIL 212
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + G A+K+ Q K + E I++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E+ P G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+++D ++DFG+ K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 433 IGKGGFGT----IYKSRIGDGMEVAVKVF-HLQCGRAFKSFDIECEIMKSIHYRNLVKII 487
IG+G FG IY S + VA+K + + F E M+ + ++VK+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ E +++E G L L LD+ + +++ L YL V
Sbjct: 106 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV--- 161
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQ-TQTLATIGYIAPEYGREGRVFA 606
H D+ NVL+ L DFG+++ + ED + + ++ I ++APE R +
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 219
Query: 607 NGDVYSFGIMLMEI 620
DV+ FG+ + EI
Sbjct: 220 ASDVWMFGVCMWEI 233
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
IG G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 90
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 148
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 149 ---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMT--------GYVATRWYR 194
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + G A+K+ Q K + E I++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E+ P G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+++D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 39/203 (19%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNL------VK 485
+G+G FG + + G +VA+K+ + + D++ I + I Y L +K
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIIN---KKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD-IFQR--------LNIMIDVASVLE 536
+ +++ +V+E Y+ N + D I QR + S +E
Sbjct: 73 LYDVIKSKDEIIMVIE-----------YAGNELFDYIVQRDKMSEQEARRFFQQIISAVE 121
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
Y H + ++H DLKP N+LLD+ + ++DFG++ ++ D + +T + + Y AP
Sbjct: 122 YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAP 175
Query: 597 EYGREGRVFANG--DVYSFGIML 617
E G+++A DV+S G++L
Sbjct: 176 EV-ISGKLYAGPEVDVWSCGVIL 197
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 432 LIGKGGFGTIYK--SRIGDGMEVAVKVFHLQCGRAFKSFDI--ECEIMKSIHYRNLVKII 487
++GKG FG + K RI E AVKV + + + I E E++K + + N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQ-QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD-IFQR--------LNIMIDVASVLEYL 538
+LE + LY+ + D I +R I+ V S + Y+
Sbjct: 88 E----------ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 539 HFNFLVPVIHCDLKPSNVLLDDTMVA---HLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595
H + ++H DLKP N+LL+ + DFG++ Q+ + T YIA
Sbjct: 138 HKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIA 191
Query: 596 PEYGREGRVFANGDVYSFGIML 617
PE R G DV+S G++L
Sbjct: 192 PEVLR-GTYDEKCDVWSAGVIL 212
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 433 IGKGGFGT----IYKSRIGDGMEVAVKVF-HLQCGRAFKSFDIECEIMKSIHYRNLVKII 487
IG+G FG IY S + VA+K + + F E M+ + ++VK+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ E +++E G L L LD+ + +++ L YL V
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV--- 133
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQ-TQTLATIGYIAPEYGREGRVFA 606
H D+ NVL+ L DFG+++ + ED + + ++ I ++APE R +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 607 NGDVYSFGIMLMEI 620
DV+ FG+ + EI
Sbjct: 192 ASDVWMFGVCMWEI 205
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 433 IGKGGFGT----IYKSRIGDGMEVAVKVF-HLQCGRAFKSFDIECEIMKSIHYRNLVKII 487
IG+G FG IY S + VA+K + + F E M+ + ++VK+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ E +++E G L L LD+ + +++ L YL V
Sbjct: 83 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV--- 138
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQ-TQTLATIGYIAPEYGREGRVFA 606
H D+ NVL+ L DFG+++ + ED + + ++ I ++APE R +
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 196
Query: 607 NGDVYSFGIMLMEI 620
DV+ FG+ + EI
Sbjct: 197 ASDVWMFGVCMWEI 210
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 28/216 (12%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRN------LVKI 486
IGKG +G ++ + G +VAVKVF S+ E EI +++ R+ +
Sbjct: 45 IGKGRYGEVWMGK-WRGEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 487 ISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV-- 544
I + L+ ++ +GSL L S+ LD L + S L +LH
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158
Query: 545 --PVI-HCDLKPSNVLLDDTMVAHLSDFGITKLLIGE--DQSMTQTQTLATIGYIAPEYG 599
P I H DLK N+L+ ++D G+ I + + + + T Y+ PE
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL 218
Query: 600 REG------RVFANGDVYSFGIMLMEIHSAKQQCVS 629
E + + D+YSFG++L E+ ++CVS
Sbjct: 219 DESLNRNHFQSYIMADMYSFGLILWEV---ARRCVS 251
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 47/220 (21%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDI---------ECEIMKSIHYRN 482
IG G +G + +R G +VA+K + +FD+ E +I+K + N
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIK-------KIPNAFDVVTNAKRTLRELKILKHFKHDN 115
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR-LNIMIDVASVLEYLHFN 541
++ I K+++ +P+G K +Y +LD+ + L+ +I + L H
Sbjct: 116 IIAI---------KDILRPTVPYGEF-KSVY---VVLDLMESDLHQIIHSSQPLTLEHVR 162
Query: 542 FLV-------------PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE--DQSMTQTQ 586
+ + VIH DLKPSN+L+++ + DFG+ + L + T+
Sbjct: 163 YFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 222
Query: 587 TLATIGYIAPEYGREGRVFANG-DVYSFGIMLMEIHSAKQ 625
+AT Y APE + D++S G + E+ + +Q
Sbjct: 223 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDI-ECEIMKSIHYRNLV---KII 487
IG+G +G + + + + VA+K + + + E +I+ + N++ II
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 488 SSCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPV 546
+ + E+ K++ +++ + L K L + + D +I + +L L + V
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-----HICYFLYQILRGLKYIHSANV 149
Query: 547 IHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE-DQSMTQTQTLATIGYIAPEYGREGRVF 605
+H DLKPSN+LL+ T + DFG+ ++ + D + T+ +AT Y APE + +
Sbjct: 150 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 606 ANG-DVYSFGIMLMEIHSAK 624
D++S G +L E+ S +
Sbjct: 210 TKSIDIWSVGCILAEMLSNR 229
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 433 IGKGGFGT----IYKSRIGDGMEVAVKVF-HLQCGRAFKSFDIECEIMKSIHYRNLVKII 487
IG+G FG IY S + VA+K + + F E M+ + ++VK+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ E +++E G L L LD+ + +++ L YL V
Sbjct: 81 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV--- 136
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQ-TQTLATIGYIAPEYGREGRVFA 606
H D+ NVL+ L DFG+++ + ED + + ++ I ++APE R +
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 194
Query: 607 NGDVYSFGIMLMEI 620
DV+ FG+ + EI
Sbjct: 195 ASDVWMFGVCMWEI 208
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 25/204 (12%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA-TIGYIAPEYGRE 601
+ +I+ DLKP N+L+D ++DFG K + G +T LA T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLAGTPEYLAPEI--- 209
Query: 602 GRVFANG-----DVYSFGIMLMEI 620
+ + G D ++ G+++ E+
Sbjct: 210 --ILSKGYNKAVDWWALGVLIYEM 231
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 128
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 189 DVWSCGIVL 197
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 129
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 190 DVWSCGIVL 198
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 433 IGKGGFGT----IYKSRIGDGMEVAVKVF-HLQCGRAFKSFDIECEIMKSIHYRNLVKII 487
IG+G FG IY S + VA+K + + F E M+ + ++VK+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ E +++E G L L LD+ + +++ L YL V
Sbjct: 80 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV--- 135
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQ-TQTLATIGYIAPEYGREGRVFA 606
H D+ NVL+ L DFG+++ + ED + + ++ I ++APE R +
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 193
Query: 607 NGDVYSFGIMLMEI 620
DV+ FG+ + EI
Sbjct: 194 ASDVWMFGVCMWEI 207
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 433 IGKGGFGT----IYKSRIGDGMEVAVKVF-HLQCGRAFKSFDIECEIMKSIHYRNLVKII 487
IG+G FG IY S + VA+K + + F E M+ + ++VK+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ E +++E G L L LD+ + +++ L YL V
Sbjct: 75 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV--- 130
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQ-TQTLATIGYIAPEYGREGRVFA 606
H D+ NVL+ L DFG+++ + ED + + ++ I ++APE R +
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 188
Query: 607 NGDVYSFGIMLMEI 620
DV+ FG+ + EI
Sbjct: 189 ASDVWMFGVCMWEI 202
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + G A+K+ Q K + E I++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E+ P G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+++D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 431 NLIGKGGFGTIYKSRIGDG--------MEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRN 482
++GKGG+G +++ R G M+V K ++ + E I++ + +
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
+V +I + L+LE++ G L L ++ + +++ L +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLHQK- 140
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE-YGRE 601
+I+ DLKP N++L+ L+DFG+ K I D ++T TI Y+APE R
Sbjct: 141 --GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI-HDGTVTHX-FCGTIEYMAPEILMRS 196
Query: 602 GRVFANGDVYSFGIMLMEI 620
G A D +S G ++ ++
Sbjct: 197 GHNRAV-DWWSLGALMYDM 214
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 31/225 (13%)
Query: 422 RATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHY 480
R F E ++G+G FG + K+R D A+K + E ++ S+++
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNH 61
Query: 481 -------------RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNI 527
RN VK ++ + + E+ + +L ++S N + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITK-------LLIGEDQ 580
+ L Y+H +IH +LKP N+ +D++ + DFG+ K +L + Q
Sbjct: 122 FRQILEALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 581 SM-----TQTQTLATIGYIAPEY-GREGRVFANGDVYSFGIMLME 619
++ T + T Y+A E G D YS GI+ E
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 47/220 (21%)
Query: 433 IGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDI---------ECEIMKSIHYRN 482
IG G +G + +R G +VA+K + +FD+ E +I+K + N
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIK-------KIPNAFDVVTNAKRTLRELKILKHFKHDN 114
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR-LNIMIDVASVLEYLHFN 541
++ I K+++ +P+G K +Y +LD+ + L+ +I + L H
Sbjct: 115 IIAI---------KDILRPTVPYGEF-KSVY---VVLDLMESDLHQIIHSSQPLTLEHVR 161
Query: 542 FLV-------------PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE--DQSMTQTQ 586
+ + VIH DLKPSN+L+++ + DFG+ + L + T+
Sbjct: 162 YFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 221
Query: 587 TLATIGYIAPEYGREGRVFANG-DVYSFGIMLMEIHSAKQ 625
+AT Y APE + D++S G + E+ + +Q
Sbjct: 222 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 128
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 189 DVWSCGIVL 197
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 44/236 (18%)
Query: 425 YGFNENNL-----IGKGGFGTIYKS-RIGDGME-----VAVKVF----HLQCGRAFKSFD 469
+ F NNL +G G FG + ++ G G E VAVK+ H A S
Sbjct: 26 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS-- 83
Query: 470 IECEIMKSI-HYRNLVKIISSCSNEEFKELVLEHMPHGSL-------------------- 508
E +IM + + N+V ++ +C++ ++ E+ +G L
Sbjct: 84 -ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQ 142
Query: 509 --EKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHL 566
E L++ L+ VA + +L IH D+ NVLL + VA +
Sbjct: 143 DPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKI 199
Query: 567 SDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
DFG+ + ++ + + + + ++APE + DV+S+GI+L EI S
Sbjct: 200 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 90
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 148
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 149 ---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMT--------GYVATRWYR 194
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 23/203 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E+ P G + L + R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+++D ++DFG K + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEI---- 210
Query: 603 RVFANG-----DVYSFGIMLMEI 620
+ + G D ++ G+++ E+
Sbjct: 211 -ILSKGYNKAVDWWALGVLIYEM 232
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 129
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 190 DVWSCGIVL 198
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 24/221 (10%)
Query: 406 MPPKATWRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRA 464
MP R+ E R Y F +++G G F + + + VA+K +
Sbjct: 1 MPGAVEGPRWKQAEDIRDIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG 58
Query: 465 FK-SFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSL-----EKCLYSSNCI 518
+ S + E ++ I + N+V + + L+++ + G L EK Y+
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER-- 116
Query: 519 LDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVL---LDDTMVAHLSDFGITKLL 575
++ V ++YLH + ++H DLKP N+L LD+ +SDFG++K+
Sbjct: 117 ----DASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM- 168
Query: 576 IGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIM 616
ED + T GY+APE + D +S G++
Sbjct: 169 --EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 129
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 190 DVWSCGIVL 198
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 128
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 189 DVWSCGIVL 197
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 129
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 190 DVWSCGIVL 198
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 179
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEI---- 230
Query: 603 RVFANG-----DVYSFGIMLMEI 620
+ + G D ++ G+++ E+
Sbjct: 231 -ILSKGYNKAVDWWALGVLIYEM 252
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 145
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D+ ++DFG K + G + T Y+APE
Sbjct: 146 SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 200
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 201 GYNKAVDWWALGVLIYEM 218
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 128
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 189 DVWSCGIVL 197
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 96
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 97 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 154
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 155 ---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMT--------GYVATRWYR 200
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 128
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 189 DVWSCGIVL 197
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 25/204 (12%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 179
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTL-ATIGYIAPEYGRE 601
+ +I+ DLKP N+L+D ++DFG K + G T TL T Y+APE
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------ATWTLCGTPEYLAPEI--- 230
Query: 602 GRVFANG-----DVYSFGIMLMEI 620
+ + G D ++ G+++ E+
Sbjct: 231 --ILSKGYNKAVDWWALGVLIYEM 252
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 128
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 189 DVWSCGIVL 197
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 129
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 190 DVWSCGIVL 198
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEI---- 209
Query: 603 RVFANG-----DVYSFGIMLMEI 620
+ + G D ++ G+++ E+
Sbjct: 210 -ILSKGYNKAVDWWALGVLIYEM 231
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEI---- 209
Query: 603 RVFANG-----DVYSFGIMLMEI 620
+ + G D ++ G+++ E+
Sbjct: 210 -ILSKGYNKAVDWWALGVLIYEM 231
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 13 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 127
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 128 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 187
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 188 DVWSCGIVL 196
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 128
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 189 DVWSCGIVL 197
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 128
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 189 DVWSCGIVL 197
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 139
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 140 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 185
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 83
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 84 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 141
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 142 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 187
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 14 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 128
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 189 DVWSCGIVL 197
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 153
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 154 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 208
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 209 GYNKAVDWWALGVLIYEM 226
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G +G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 15 LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 129
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 190 DVWSCGIVL 198
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 82
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 83 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 140
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 141 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 186
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX-----GTPEYLAPEI---- 209
Query: 603 RVFANG-----DVYSFGIMLMEI 620
+ + G D ++ G+++ E+
Sbjct: 210 -ILSKGYNKAVDWWALGVLIYEM 231
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 433 IGKGGFGTIYKS------RIGDGMEVAVKVFHLQCGRA-FKSFDIECEIMKSI-HYRNLV 484
+G+G FG + ++ + VAVK+ + ++ E +I+ I H+ N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 485 KIISSCSNEEFKELVL-EHMPHGSLEKCLYSSNC-------ILDIFQRLNIMI----DVA 532
++ +C+ +V+ E G+L L S + F L +I VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 533 SVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIG 592
+E+L IH DL N+LL + V + DFG+ + + + + + +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 593 YIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
++APE + DV+SFG++L EI S
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 433 IGKGGFGTIY--KSRIGDGMEVAVKVFHLQCGRAFKSFD---IECEIMKSIHYRNLVKII 487
+G G FG ++ +SR +G A+KV + K + E ++ + + ++++
Sbjct: 14 LGTGSFGRVHLIRSR-HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW 72
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ + + ++++++ G L L S + + +V LEYLH +I
Sbjct: 73 GTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLHSK---DII 128
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFAN 607
+ DLKP N+LLD ++DFG K + + T YIAPE +
Sbjct: 129 YRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC-----GTPDYIAPEVVSTKPYNKS 183
Query: 608 GDVYSFGIMLMEI 620
D +SFGI++ E+
Sbjct: 184 IDWWSFGILIYEM 196
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 90
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 148
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 149 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 194
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 92
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 150
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 151 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 196
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 82
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 83 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 140
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 141 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 186
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 91
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 149
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 150 ---ADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMT--------GYVATRWYR 195
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 23/199 (11%)
Query: 427 FNENNLIGKGGFGTIYK-SRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK 485
F + +G+G +Y+ + G A+KV + K E ++ + + N++K
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIK 112
Query: 486 IISSCSNEEFKELVLEHMPHGSL-----EKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
+ LVLE + G L EK YS D ++ + + YLH
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ------ILEAVAYLHE 166
Query: 541 NFLVPVIHCDLKPSNVLLDD---TMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE 597
N ++H DLKP N+L ++DFG++K++ E Q + +T T GY APE
Sbjct: 167 N---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKT-VCGTPGYCAPE 220
Query: 598 YGREGRVFANGDVYSFGIM 616
R D++S GI+
Sbjct: 221 ILRGCAYGPEVDMWSVGII 239
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 87
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 145
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 146 ---ADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMT--------GYVATRWYR 191
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 90
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 91 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 148
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 149 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 194
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 84
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 85 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 142
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 143 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 188
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 189 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 87
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 145
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 146 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 191
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 87
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 145
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 146 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 191
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 87
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 88 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 145
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 146 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 191
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 431 NLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISS 489
++GKG FG + +R+ + G AVKV L+ + D+EC + + +I+S
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEK-------RILSL 79
Query: 490 CSNEEFKE-------------LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLE 536
N F V+E + G L + S + R ++ S L
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISALM 138
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAP 596
+LH +I+ DLK NVLLD L+DFG+ K I +T T YIAP
Sbjct: 139 FLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC--NGVTTATFCGTPDYIAP 193
Query: 597 EYGREGRVFANGDVYSFGIMLMEI 620
E +E D ++ G++L E+
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEM 217
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 104
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 105 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 162
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 163 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 208
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 41/212 (19%)
Query: 433 IGKGGFGTI---YKSRIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNL 483
+G G +G++ Y +R+ +VAVK + R F+S E ++K + + N+
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVK----KLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 484 VKIIS----SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+ ++ + S E+F E+ L G+ + + D ++ V +L L
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSD----EHVQFLVYQLLRGLK 145
Query: 540 FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYG 599
+ +IH DLKPSNV +++ + DFG+ + D+ MT GY+A +
Sbjct: 146 YIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMT--------GYVATRWY 194
Query: 600 REGRVFANG-------DVYSFGIMLMEIHSAK 624
R + N D++S G ++ E+ K
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 108
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 109 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 166
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 167 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 212
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 97
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 155
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 156 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 201
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 97
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 155
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 156 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 201
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 105
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 163
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 164 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 209
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + G A+K+ Q K + E I++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
L K+ S + +V+E+ P G + L + R + EYLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 159
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+++D ++DFG K + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 214
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 215 GYNKAVDWWALGVLIYEM 232
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 546 VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVF 605
V+H DLKP+NV LD L DFG+ ++L D S +T + T Y++PE
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAKT-FVGTPYYMSPEQMNRMSYN 194
Query: 606 ANGDVYSFGIMLMEI 620
D++S G +L E+
Sbjct: 195 EKSDIWSLGCLLYEL 209
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 117 NLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLK 176
N+ + D+ +S + LT L +YL NKL +EL+ L+ + +
Sbjct: 34 NIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93
Query: 177 DNKLEGTIPYDIF-RLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEI 234
DNKL+ +P +F +LV L +L L N+L F +L L LSL YN+ LP +
Sbjct: 94 DNKLQA-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGV 152
Query: 235 -GNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGD 284
L L + N V L +L+ L L N LK +P+ D
Sbjct: 153 FDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPEGAFD 202
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 137 PEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIF-RLVKLY 195
P +LT LT + LG N+L +L L+ + L +N+L+ +P F +L +L
Sbjct: 126 PRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELK 184
Query: 196 KLDLGGNKLSGSILTCFSNLASLRTLSLSYN 226
L L N+L F +L L+ L L N
Sbjct: 185 TLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 96
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 97 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 154
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 155 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 200
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFH------LQCGRAFKSFDIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R ++ E ++K + + N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR----ELRLLKHMKHENVIG 97
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 98 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 155
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 156 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 201
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEI---- 209
Query: 603 RVFANG-----DVYSFGIMLMEI 620
+ + G D ++ G+++ E+
Sbjct: 210 -ILSKGYNKAVDWWALGVLIYEM 231
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 91
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 149
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 150 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 195
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 41/212 (19%)
Query: 433 IGKGGFGTI---YKSRIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNL 483
+G G +G++ Y +R+ +VAVK + R F+S E ++K + + N+
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVK----KLSRPFQSLIHARRTYRELRLLKHLKHENV 81
Query: 484 VKIIS----SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+ ++ + S E+F E+ L G+ + + D ++ V +L L
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSD----EHVQFLVYQLLRGLK 137
Query: 540 FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYG 599
+ +IH DLKPSNV +++ + DFG+ + D+ MT GY+A +
Sbjct: 138 YIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEMT--------GYVATRWY 186
Query: 600 REGRVFANG-------DVYSFGIMLMEIHSAK 624
R + N D++S G ++ E+ K
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 414 RFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFK-SFDIE 471
R+ E R Y F +++G G F + + + VA+K + + S + E
Sbjct: 9 RWKQAEDIRDIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSL-----EKCLYSSNCILDIFQRLN 526
++ I + N+V + + L+++ + G L EK Y+
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASR 120
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVL---LDDTMVAHLSDFGITKLLIGEDQSMT 583
++ V ++YLH + ++H DLKP N+L LD+ +SDFG++K+ ED
Sbjct: 121 LIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 584 QTQTLATIGYIAPEYGREGRVFANGDVYSFGIM 616
+ T GY+APE + D +S G++
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 431 NLIGKGGFGTIYKSRIGDG--------MEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRN 482
++G G +G ++ R G M+V K +Q + + E ++++ I
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 483 LVKIISSCSNEEFK-ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASV---LEYL 538
+ + E K L+L+++ G L ++ + F + I V + LE+L
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGEL----FTHLSQRERFTEHEVQIYVGEIVLALEHL 175
Query: 539 HFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
H + +I+ D+K N+LLD L+DFG++K + D++ TI Y+AP+
Sbjct: 176 H---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA-DETERAYDFCGTIEYMAPDI 231
Query: 599 GREGRVFANG--DVYSFGIMLMEI 620
R G + D +S G+++ E+
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYEL 255
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEI---- 209
Query: 603 RVFANG-----DVYSFGIMLMEI 620
+ + G D ++ G+++ E+
Sbjct: 210 -ILSKGYNKAVDWWALGVLIYEM 231
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 433 IGKGGFGTIYKS------RIGDGMEVAVKVFHLQCGRA-FKSFDIECEIMKSI-HYRNLV 484
+G+G FG + ++ + VAVK+ + ++ E +I+ I H+ N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 485 KIISSCSNEEFKELVL------------------EHMPHGSLEKCLYSSNCILDIFQRLN 526
++ +C+ +V+ E +P+ + LY L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKD--FLTLEHLIC 154
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ 586
VA +E+L IH DL N+LL + V + DFG+ + + + + +
Sbjct: 155 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 587 TLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++APE + DV+SFG++L EI S
Sbjct: 212 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 214
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 215 GYNKAVDWWALGVLIYEM 232
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Query: 433 IGKGGFGTIYKS------RIGDGMEVAVKVFHLQCGRA-FKSFDIECEIMKSI-HYRNLV 484
+G+G FG + ++ + VAVK+ + ++ E +I+ I H+ N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 485 KIISSCSNEEFKELVL-EHMPHGSLEKCLYSS-NCILDIFQRLNIMIDVASVLEYLHFNF 542
++ +C+ +V+ E G+L L S N + ++ D ++ + ++F
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 543 LVP----------VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIG 592
V IH DL N+LL + V + DFG+ + + + + + +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 593 YIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
++APE + DV+SFG++L EI S
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 546 VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY-----GR 600
VIH D+KPSN+LLD+ L DFGI+ L+ +D++ ++ A Y+APE
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLV-DDKAKDRSAGCAA--YMAPERIDPPDPT 202
Query: 601 EGRVFANGDVYSFGIMLMEIHSAK 624
+ DV+S GI L+E+ + +
Sbjct: 203 KPDYDIRADVWSLGISLVELATGQ 226
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 433 IGKGGFGTIYKS------RIGDGMEVAVKVFHLQCGRA-FKSFDIECEIMKSI-HYRNLV 484
+G+G FG + ++ + VAVK+ + ++ E +I+ I H+ N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 485 KIISSCSNEEFKELVL------------------EHMPHGSLEKCLYSSNCILDIFQRLN 526
++ +C+ +V+ E +P+ + LY L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD--FLTLEHLIC 152
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ 586
VA +E+L IH DL N+LL + V + DFG+ + + + + +
Sbjct: 153 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 587 TLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++APE + DV+SFG++L EI S
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 96/195 (49%), Gaps = 23/195 (11%)
Query: 433 IGKGGFGTI-----YKSRIGDGMEVAVKVFHLQC-GRAFKSFDIECEI--MKSIHYRNLV 484
+G+G FG + YK++ +VA+K Q ++ +E EI +K + + +++
Sbjct: 17 LGEGSFGKVKLATHYKTQ----QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
K+ + +V+E+ + + D +R I A +EY H +
Sbjct: 73 KLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICA--IEYCHRH--- 127
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
++H DLKP N+LLDD + ++DFG++ ++ D + +T + + Y APE G++
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEVI-NGKL 183
Query: 605 FANG--DVYSFGIML 617
+A DV+S GI+L
Sbjct: 184 YAGPEVDVWSCGIVL 198
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 433 IGKGGFGTIYKS------RIGDGMEVAVKVFHLQCGRA-FKSFDIECEIMKSI-HYRNLV 484
+G+G FG + ++ + VAVK+ + ++ E +I+ I H+ N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 485 KIISSCSNEEFKELVL------------------EHMPHGSLEKCLYSSNCILDIFQRLN 526
++ +C+ +V+ E +P+ + LY L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD--FLTLEHLIC 152
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ 586
VA +E+L IH DL N+LL + V + DFG+ + + + + +
Sbjct: 153 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 587 TLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++APE + DV+SFG++L EI S
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 414 RFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFK-SFDIE 471
R+ E R Y F +++G G F + + + VA+K + + S + E
Sbjct: 9 RWKQAEDIRDIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSL-----EKCLYSSNCILDIFQRLN 526
++ I + N+V + + L+++ + G L EK Y+
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASR 120
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVL---LDDTMVAHLSDFGITKLLIGEDQSMT 583
++ V ++YLH + ++H DLKP N+L LD+ +SDFG++K+ ED
Sbjct: 121 LIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 584 QTQTLATIGYIAPEYGREGRVFANGDVYSFGIM 616
+ T GY+APE + D +S G++
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 39/207 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 91
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 149
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 150 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 195
Query: 601 EGRVFANG-------DVYSFGIMLMEI 620
+ N D++S G ++ E+
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAEL 222
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMID 530
E ++KS+ + N++K+ ++++ LV E G L + + + + D NIM
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQ 154
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDT---MVAHLSDFGITKLLIGEDQSMTQTQT 587
+ S + YLH + ++H D+KP N+LL++ + + DFG++ +
Sbjct: 155 ILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF---SKDYKLRDR 208
Query: 588 LATIGYIAPEYGREGRVFANGDVYSFGIML 617
L T YIAPE ++ + DV+S G+++
Sbjct: 209 LGTAYYIAPEVLKK-KYNEKCDVWSCGVIM 237
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 414 RFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGME-VAVKVFHLQCGRAFK-SFDIE 471
R+ E R Y F +++G G F + + + VA+K + + S + E
Sbjct: 9 RWKQAEDIRDIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 472 CEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSL-----EKCLYSSNCILDIFQRLN 526
++ I + N+V + + L+++ + G L EK Y+
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASR 120
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVL---LDDTMVAHLSDFGITKLLIGEDQSMT 583
++ V ++YLH + ++H DLKP N+L LD+ +SDFG++K+ ED
Sbjct: 121 LIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 584 QTQTLATIGYIAPEYGREGRVFANGDVYSFGIM 616
+ T GY+APE + D +S G++
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + G A+K+ Q K + E I++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
L K+ S + +V+E+ P G + L + R + EYLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+++D ++DFG K + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 214
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 215 GYNKAVDWWALGVLIYEM 232
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + G A+K+ Q K + E I++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
L K+ S + +V+E+ P G + L + R + EYLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+++D ++DFG K + G + T Y+APE
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 214
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 215 GYNKAVDWWALGVLIYEM 232
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 433 IGKGGFGTIYKS------RIGDGMEVAVKVFHLQCGRA-FKSFDIECEIMKSI-HYRNLV 484
+G+G FG + ++ + VAVK+ + ++ E +I+ I H+ N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 485 KIISSCSNEEFKELVL------------------EHMPHGSLEKCLYSSNCILDIFQRLN 526
++ +C+ +V+ E +P+ + LY L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD--FLTLEHLIC 143
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ 586
VA +E+L IH DL N+LL + V + DFG+ + + + + +
Sbjct: 144 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 587 TLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++APE + DV+SFG++L EI S
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 25/234 (10%)
Query: 49 IFDVSTLKDLALQDNYLSGSLSSIAD----------NYLTSSTPELSFLSSLSNCKSLVV 98
I D+ LK+L N L S ++I+D L+ S+ +++ L L+N +L
Sbjct: 119 ITDIDPLKNLT-NLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKPLANLTTLER 177
Query: 99 FLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNG 158
+S+N ++ I + NL E + +S P +G LTNL + L GN+L
Sbjct: 178 LDISSNKVSDISVLAKLTNL----ESLIATNNQISDITP--LGILTNLDELSLNGNQLKD 231
Query: 159 SIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASL 218
TL L L + L +N++ P + L KL +L LG N++S ++ + L +L
Sbjct: 232 --IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN--ISPLAGLTAL 285
Query: 219 RTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYN 272
L L+ N I NLK L + NN S + P + SL LQ LF N
Sbjct: 286 TNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNN 337
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 80 STPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEE 139
S +L+ ++ L N LV L++NN + I P ++ NL+ L +F+ ++ +
Sbjct: 71 SNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLT-GLTLFNNQITDI-----DP 124
Query: 140 IGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDL 199
+ NLTNL + L N + S L L LQ + N++ P + L L +LD+
Sbjct: 125 LKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDI 180
Query: 200 GGNKLSG-SILTCFSNLASL 218
NK+S S+L +NL SL
Sbjct: 181 SSNKVSDISVLAKLTNLESL 200
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 433 IGKGGFGTIYKS------RIGDGMEVAVKVFHLQCGRA-FKSFDIECEIMKSI-HYRNLV 484
+G+G FG + ++ + VAVK+ + ++ E +I+ I H+ N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 485 KIISSCSNEEFKELVL------------------EHMPHGSLEKCLYSSNCILDIFQRLN 526
++ +C+ +V+ E +P+ + LY L + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD--FLTLEHLIC 143
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ 586
VA +E+L IH DL N+LL + V + DFG+ + + + + +
Sbjct: 144 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 587 TLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++APE + DV+SFG++L EI S
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 405 NMPPKATWRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQC--G 462
N ++W++ + E + + F E +G G F + + + K+F ++C
Sbjct: 6 NGESSSSWKKQA--EDIKKIFEFKET--LGTGAFSEVVLAE----EKATGKLFAVKCIPK 57
Query: 463 RAFK----SFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSL-----EKCLY 513
+A K S + E +++ I + N+V + + LV++ + G L EK Y
Sbjct: 58 KALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFY 117
Query: 514 SSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFG 570
+ + ++ VL+ +++ + ++H DLKP N+L D+ +SDFG
Sbjct: 118 TEKDASTLIRQ---------VLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFG 168
Query: 571 ITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIM 616
++K+ E + + T GY+APE + D +S G++
Sbjct: 169 LSKM---EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 7/148 (4%)
Query: 140 IGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIF-RLVKLYKLD 198
I L N+ + LGGNKL+ L+EL L Y+ L N+L+ ++P +F +L L +L
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELV 115
Query: 199 LGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEI-GNLKVLIGIDFSMNNFSSVIPT 256
L N+L F L +L L+L++N LP + L L +D S N S+
Sbjct: 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEG 175
Query: 257 TIGSLKDLQYLFLGYNILKGSIPDSVGD 284
L L+ L L N LK S+PD V D
Sbjct: 176 VFDKLTQLKDLRLYQNQLK-SVPDGVFD 202
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 4/140 (2%)
Query: 143 LTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIF-RLVKLYKLDLGG 201
LTNLT + L GN+L +L L+ + L +N+L+ ++P +F +L L L+L
Sbjct: 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAH 142
Query: 202 NKLSGSILTCFSNLASLRTLSLSYND-GPLPLEI-GNLKVLIGIDFSMNNFSSVIPTTIG 259
N+L F L +L L LSYN LP + L L + N SV
Sbjct: 143 NQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFD 202
Query: 260 SLKDLQYLFLGYNILKGSIP 279
L LQY++L N + P
Sbjct: 203 RLTSLQYIWLHDNPWDCTCP 222
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 46 PAAIFD-VSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNN 104
P +FD ++ LK+L L +N L S+ D T L++L+ L++N
Sbjct: 101 PNGVFDKLTNLKELVLVEN----QLQSLPDGVFDKLT-NLTYLN------------LAHN 143
Query: 105 PLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEI-GNLTNLTAIYLGGNKLNGSIPFT 163
L LP+ L++ E+ D+S N +PE + LT L + L N+L
Sbjct: 144 QLQS-LPKGVFDKLTNLTEL-DLS-YNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGV 200
Query: 164 LRELQKLQYVGLKDNKLEGTIP 185
L LQY+ L DN + T P
Sbjct: 201 FDRLTSLQYIWLHDNPWDCTCP 222
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 12/146 (8%)
Query: 433 IGKGGFGTIYK--SRIGDGMEVAVKVFHLQCGRAFKSFDI-ECEIMKSIHYRNLVKIISS 489
+G+G + T+YK S++ D + VA+K L+ I E ++K + + N+V +
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 490 CSNEEFKELVLEHMPHGSLEKCL--YSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
E+ LV E+ L+K L Y +C +I N+ + + +L L + V+
Sbjct: 69 IHTEKSLTLVFEY-----LDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQKVL 122
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITK 573
H DLKP N+L+++ L+DFG+ +
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLAR 148
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G VAVK + R F+S E ++K + + N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + + D Q L + + L+Y+H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL--IYQILRGLKYIHS 139
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 140 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 185
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 433 IGKGGFGTIYKS------RIGDGMEVAVKVFHLQCGRA-FKSFDIECEIMKSI-HYRNLV 484
+G+G FG + ++ + VAVK+ + ++ E +I+ I H+ N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 485 KIISSCSNEEFKELVL------------------EHMPHGSLEKCLYSSNCILDIFQRLN 526
++ +C+ +V+ E +P+ + LY L + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD--FLTLEHLIC 189
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ 586
VA +E+L IH DL N+LL + V + DFG+ + + + + +
Sbjct: 190 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 587 TLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++APE + DV+SFG++L EI S
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T PEY
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT----------PEYLAPA 208
Query: 603 RVFANG-----DVYSFGIMLMEI 620
+ + G D ++ G+++ E+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEM 231
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 433 IGKGGFGTIYKS------RIGDGMEVAVKVFHLQCGRA-FKSFDIECEIMKSI-HYRNLV 484
+G+G FG + ++ + VAVK+ + ++ E +I+ I H+ N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 485 KIISSCSNEEFKELVL------------------EHMPHGSLEKCLYSSNCILDIFQRLN 526
++ +C+ +V+ E +P+ + LY L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD--FLTLEHLIC 152
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ 586
VA +E+L IH DL N+LL + V + DFG+ + + + + +
Sbjct: 153 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 587 TLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++APE + DV+SFG++L EI S
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 427 FNENNLIGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F +G G FG + + G A+K+ Q K + E I++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK 213
Query: 603 RVFANGDVYSFGIMLMEI 620
D ++ G+++ E+
Sbjct: 214 GYNKAVDWWALGVLIYEM 231
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 39/190 (20%)
Query: 83 ELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGN 142
++S L+ L+N +SL+ +NN ++ I P +G
Sbjct: 190 DISVLAKLTNLESLIA---TNNQISDITP----------------------------LGI 218
Query: 143 LTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGN 202
LTNL + L GN+L TL L L + L +N++ P + L KL +L LG N
Sbjct: 219 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGAN 274
Query: 203 KLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLK 262
++S ++ + L +L L L+ N I NLK L + NN S + P + SL
Sbjct: 275 QISN--ISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLT 330
Query: 263 DLQYLFLGYN 272
LQ LF N
Sbjct: 331 KLQRLFFANN 340
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 80 STPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEE 139
S +L+ ++ L N LV L++NN + I P ++ NL+ L +F+ ++ +
Sbjct: 75 SNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLT-GLTLFNNQITDI-----DP 128
Query: 140 IGNLTNLTAIYLGGNKLNGSIPFT-LRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLD 198
+ NLTNL + L N ++ + L LQ+L + N++ P + L L +LD
Sbjct: 129 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSF----GNQVTDLKP--LANLTTLERLD 182
Query: 199 LGGNKLSG-SILTCFSNLASL 218
+ NK+S S+L +NL SL
Sbjct: 183 ISSNKVSDISVLAKLTNLESL 203
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + D+G+ + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 19/202 (9%)
Query: 433 IGKGGFG-TIYKSRIGDGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISS 489
IG+G FG I DG + +K ++ + + E ++ ++ + N+V+ S
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQR---LNIMIDVASVLEYLHFNFLVPV 546
+V+++ G L K + + +L FQ L+ + + L+++H +
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVL--FQEDQILDWFVQICLALKHVHDR---KI 146
Query: 547 IHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIG---YIAPEYGREGR 603
+H D+K N+ L L DFGI ++L + T A IG Y++PE
Sbjct: 147 LHRDIKSQNIFLTKDGTVQLGDFGIARVL-----NSTVELARACIGTPYYLSPEICENKP 201
Query: 604 VFANGDVYSFGIMLMEIHSAKQ 625
D+++ G +L E+ + K
Sbjct: 202 YNNKSDIWALGCVLYELCTLKH 223
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 433 IGKGGFGTIYKS------RIGDGMEVAVKVFHLQCGRA-FKSFDIECEIMKSI-HYRNLV 484
+G+G FG + ++ + VAVK+ + ++ E +I+ I H+ N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 485 KIISSCSNEEFKELVL------------------EHMPHGSLEKCLYSSNCILDIFQRLN 526
++ +C+ +V+ E +P+ + LY L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD--FLTLEHLIC 143
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ 586
VA +E+L IH DL N+LL + V + DFG+ + + + + +
Sbjct: 144 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 587 TLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++APE + DV+SFG++L EI S
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 92
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 150
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + E MT GY+A + R
Sbjct: 151 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MT--------GYVATRWYR 196
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G VAVK + R F+S E ++K + + N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 139
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 140 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 185
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 433 IGKGGFGTIYKS------RIGDGMEVAVKVFHLQCGRA-FKSFDIECEIMKSI-HYRNLV 484
+G+G FG + ++ + VAVK+ + ++ E +I+ I H+ N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 485 KIISSCSNEEFKELVL------------------EHMPHGSLEKCLYSSNCILDIFQRLN 526
++ +C+ +V+ E +P+ + LY L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD--FLTLEHLIC 143
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ 586
VA +E+L IH DL N+LL + V + DFG+ + + + + +
Sbjct: 144 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 587 TLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++APE + DV+SFG++L EI S
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 39/190 (20%)
Query: 83 ELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGN 142
++S L+ L+N +SL+ +NN ++ I P +G
Sbjct: 186 DISVLAKLTNLESLIA---TNNQISDITP----------------------------LGI 214
Query: 143 LTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGN 202
LTNL + L GN+L TL L L + L +N++ P + L KL +L LG N
Sbjct: 215 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGAN 270
Query: 203 KLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLK 262
++S ++ + L +L L L+ N I NLK L + NN S + P + SL
Sbjct: 271 QISN--ISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLT 326
Query: 263 DLQYLFLGYN 272
LQ LF N
Sbjct: 327 KLQRLFFSNN 336
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 80 STPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEE 139
S +L+ ++ L N LV L++NN + I P ++ NL+ L +F+ ++ +
Sbjct: 71 SNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLT-GLTLFNNQITDI-----DP 124
Query: 140 IGNLTNLTAIYLGGNKLNGSIPFT-LRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLD 198
+ NLTNL + L N ++ + L LQ+L + N++ P + L L +LD
Sbjct: 125 LKNLTNLNRLELSSNTISDISALSGLTSLQQLNF----GNQVTDLKP--LANLTTLERLD 178
Query: 199 LGGNKLSG-SILTCFSNLASL 218
+ NK+S S+L +NL SL
Sbjct: 179 ISSNKVSDISVLAKLTNLESL 199
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 92
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 150
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + E MT GY+A + R
Sbjct: 151 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MT--------GYVATRWYR 196
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 92
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 93 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 150
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + E MT GY+A + R
Sbjct: 151 ---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MT--------GYVATRWYR 196
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEI---- 209
Query: 603 RVFANG-----DVYSFGIMLMEI 620
+ + G D ++ G+++ ++
Sbjct: 210 -ILSKGYNKAVDWWALGVLIYQM 231
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G VAVK + R F+S E ++K + + N++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 95
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 96 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 153
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 154 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 199
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 200 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 27/205 (13%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D M T +AT Y APE
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGXVATRWYRAPEIML 195
Query: 601 EGRVFANG-DVYSFGIMLMEIHSAK 624
+ D++S G ++ E+ + +
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G VAVK + R F+S E ++K + + N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 104
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 105 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 162
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 163 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 208
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 38/218 (17%)
Query: 427 FNENNLIGKGGFGTI-YKSRIGDGMEVAVK--------VFHLQCGRAFKSFDIECEIMKS 477
F +L+G+G +G + + G VA+K +F L+ R E +I+K
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKILKH 65
Query: 478 IHYRNLVKIIS---SCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVAS 533
+ N++ I + S E F E+ +++ + L + + + D Q +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF--IYQTLR 123
Query: 534 VLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL----------IGEDQSMT 583
++ LH + VIH DLKPSN+L++ + DFG+ +++ G+ M
Sbjct: 124 AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM- 179
Query: 584 QTQTLATIGYIAPEYGREGRVFANG-DVYSFGIMLMEI 620
T+ +AT Y APE ++ DV+S G +L E+
Sbjct: 180 -TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+++D ++DFG K + G + T Y+APE
Sbjct: 159 SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEI---- 209
Query: 603 RVFANG-----DVYSFGIMLMEI 620
+ + G D ++ G+++ E+
Sbjct: 210 -IISKGYNKAVDWWALGVLIYEM 231
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G VAVK + R F+S E ++K + + N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 105
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 163
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 164 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 209
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 546 VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVF 605
V+H DLKP+NV LD L DFG+ ++L D+ + + + T Y++PE
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDEDFAK-EFVGTPYYMSPEQMNRMSYN 194
Query: 606 ANGDVYSFGIMLMEI 620
D++S G +L E+
Sbjct: 195 EKSDIWSLGCLLYEL 209
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAF---KSFDIECEIMKSIHYRNLVKIISS 489
+G+G G + + + E AV V + RA ++ E I K +++ N+VK
Sbjct: 14 LGEGAAGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549
+ L LE+ G L + + + + +A V+ YLH + + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---IGITHR 128
Query: 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG- 608
D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE + A
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 609 DVYSFGIML 617
DV+S GI+L
Sbjct: 189 DVWSCGIVL 197
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 108/234 (46%), Gaps = 26/234 (11%)
Query: 49 IFDVSTLKDLALQDNYLSGSLSSIAD----------NYLTSSTPELSFLSSLSNCKSLVV 98
I D+ LK+L N L S ++I+D L+ S+ +++ L L+N +L
Sbjct: 119 ITDIDPLKNLT-NLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKPLANLTTLER 177
Query: 99 FLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNG 158
+S+N ++ I + NL E + +S P +G LTNL + L GN+L
Sbjct: 178 LDISSNKVSDISVLAKLTNL----ESLIATNNQISDITP--LGILTNLDELSLNGNQLKD 231
Query: 159 SIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASL 218
TL L L + L +N++ P + L KL +L LG N++S ++ + L +L
Sbjct: 232 --IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN--ISPLAGLTAL 285
Query: 219 RTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYN 272
L L+ N I NLK L + NN S + P + SL LQ LF YN
Sbjct: 286 TNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF-YN 336
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 80 STPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEE 139
S +L+ ++ L N LV L++NN + I P ++ NL+ L +F+ ++ +
Sbjct: 71 SNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLT-GLTLFNNQITDI-----DP 124
Query: 140 IGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDL 199
+ NLTNL + L N + S L L LQ + N++ P + L L +LD+
Sbjct: 125 LKNLTNLNRLELSSNTI--SDISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDI 180
Query: 200 GGNKLSG-SILTCFSNLASL 218
NK+S S+L +NL SL
Sbjct: 181 SSNKVSDISVLAKLTNLESL 200
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 19/194 (9%)
Query: 433 IGKGGFGTIYKS--RIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSI------HYRNLV 484
+G+G +G + + R+ + VAVK+ ++ ++ D I K I ++ N+V
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINAMLNHENVV 68
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
K + L LE+ G L + + + + +A V+ YLH +
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-YLHG---I 124
Query: 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV 604
+ H D+KP N+LLD+ +SDFG+ + ++ + T+ Y+APE +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 605 FANG-DVYSFGIML 617
A DV+S GI+L
Sbjct: 185 HAEPVDVWSCGIVL 198
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 427 FNENNLIGKGGFGTIYKS-RIGDGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYR-- 481
+ L+GKGGFGT++ R+ D ++VA+KV G + S + C + ++ ++
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 482 ------NLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASV 534
+++++ +E LVLE +P L + + + R V +
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRC-FFGQVVAA 151
Query: 535 LEYLHFNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGY 593
+++ H V+H D+K N+L+D A L DFG LL D+ T T Y
Sbjct: 152 IQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALL--HDEPYTDFD--GTRVY 204
Query: 594 IAPEYGREGRVFA-NGDVYSFGIMLMEI 620
PE+ + A V+S GI+L ++
Sbjct: 205 SPPEWISRHQYHALPATVWSLGILLYDM 232
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 39/207 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G VAVK + R F+S E ++K + + N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 91
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 92 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 149
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D MT GY+A + R
Sbjct: 150 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT--------GYVATRWYR 195
Query: 601 EGRVFANG-------DVYSFGIMLMEI 620
+ N D++S G ++ E+
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAEL 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 108
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 109 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 166
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D M GY+A + R
Sbjct: 167 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMX--------GYVATRWYR 212
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 15/193 (7%)
Query: 80 STPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEE 139
S+ +++ L L+N +L +S+N ++ I + NL E + +S P
Sbjct: 159 SSNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNL----ESLIATNNQISDITP-- 212
Query: 140 IGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDL 199
+G LTNL + L GN+L TL L L + L +N++ P + L KL +L L
Sbjct: 213 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 268
Query: 200 GGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIG 259
G N++S ++ + L +L L L+ N I NLK L + NN S + P +
Sbjct: 269 GANQISN--ISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VS 324
Query: 260 SLKDLQYLFLGYN 272
SL LQ LF YN
Sbjct: 325 SLTKLQRLFF-YN 336
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 80 STPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEE 139
S +L+ ++ L N LV L++NN + I P ++ NL+ L +F+ ++ +
Sbjct: 71 SNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLT-GLTLFNNQITDI-----DP 124
Query: 140 IGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDL 199
+ NLTNL + L N + S L L LQ + N++ P + L L +LD+
Sbjct: 125 LKNLTNLNRLELSSNTI--SDISALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDI 180
Query: 200 GGNKLSG-SILTCFSNLASL 218
NK+S S+L +NL SL
Sbjct: 181 SSNKVSDISVLAKLTNLESL 200
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 546 VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVF 605
V+H DLKP+NV LD L DFG+ ++L D S + + T Y++PE
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAKA-FVGTPYYMSPEQMNRMSYN 194
Query: 606 ANGDVYSFGIMLMEI 620
D++S G +L E+
Sbjct: 195 EKSDIWSLGCLLYEL 209
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 9/187 (4%)
Query: 433 IGKGGFGTIYK-SRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G FG +++ + G A K ++ E + M + + LV + +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
++ ++ E M G L + + + + + + M V L ++H N V H DL
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV---HLDL 281
Query: 552 KPSNVLLDDTMVAHLS--DFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
KP N++ L DFG+T L D + T T + APE V D
Sbjct: 282 KPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTD 338
Query: 610 VYSFGIM 616
++S G++
Sbjct: 339 MWSVGVL 345
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 38/218 (17%)
Query: 427 FNENNLIGKGGFGTI-YKSRIGDGMEVAVK--------VFHLQCGRAFKSFDIECEIMKS 477
F +L+G+G +G + + G VA+K +F L+ R E +I+K
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKILKH 65
Query: 478 IHYRNLVKIIS---SCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVAS 533
+ N++ I + S E F E+ +++ + L + + + D Q +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF--IYQTLR 123
Query: 534 VLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL----------IGEDQSMT 583
++ LH + VIH DLKPSN+L++ + DFG+ +++ G+ M
Sbjct: 124 AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM- 179
Query: 584 QTQTLATIGYIAPEYGREGRVFANG-DVYSFGIMLMEI 620
T+ +AT Y APE ++ DV+S G +L E+
Sbjct: 180 -TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 101 LSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSI 160
LS NPL IL S N S L+ D+S+C + + L +L+ + L GN +
Sbjct: 34 LSFNPL-KILKSYSFSNFS-ELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFS 91
Query: 161 PFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTC-FSNLASLR 219
P + L L+ + + KL + I +L+ L KL++ N + L FSNL +L
Sbjct: 92 PGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLV 151
Query: 220 TLSLSYN 226
+ LSYN
Sbjct: 152 HVDLSYN 158
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
Query: 162 FTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLA--SLR 219
F +L L+ + L NK G+I + L L LDL N LS S +S+L SLR
Sbjct: 317 FPTLDLPFLKSLTLTMNK--GSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLR 374
Query: 220 TLSLSYNDG-PLPLEIGNLKVLIGIDFSMNNFSSVIP-TTIGSLKDLQYLFLGY 271
L LS+N + L+ L +DF + V + SL+ L YL + Y
Sbjct: 375 HLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISY 428
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
VA +E+L IH DL N+LL + V + DFG+ + + + + T
Sbjct: 208 VARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++APE + DV+S+G++L EI S
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 432 LIGKGGFGTIYKSRIGDGMEV-AVKVFH---LQCGRAFKSFDIECEIMKSIHYRNLVKII 487
+GKGGF ++ D EV A K+ L + +E I +S+ ++++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ +F +VLE SL + + + R + V +YLH N VI
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC-QYLHRNR---VI 139
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGI-TKLLIGEDQSMTQTQTLATIGYIAPEY-GREGRVF 605
H DLK N+ L++ + + DFG+ TK+ ++ T T YIAPE ++G F
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSKKGHSF 196
Query: 606 ANGDVYSFGIML 617
DV+S G ++
Sbjct: 197 -EVDVWSIGCIM 207
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 547 IHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFA 606
IH DL N+LL + V + DFG+ + + + + + + ++APE +
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 607 NGDVYSFGIMLMEIHS 622
DV+SFG++L EI S
Sbjct: 275 QSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
VA +E+L IH DL N+LL + V + DFG+ + + + + +
Sbjct: 200 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++APE + DV+SFG++L EI S
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 432 LIGKGGFGTIYKSRIGDGMEV-AVKVFH---LQCGRAFKSFDIECEIMKSIHYRNLVKII 487
+GKGGF ++ D EV A K+ L + +E I +S+ ++++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ +F +VLE SL + + + R + V +YLH N VI
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC-QYLHRNR---VI 139
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGI-TKLLIGEDQSMTQTQTLATIGYIAPEY-GREGRVF 605
H DLK N+ L++ + + DFG+ TK+ ++ T T YIAPE ++G F
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSKKGHSF 196
Query: 606 ANGDVYSFGIML 617
DV+S G ++
Sbjct: 197 -EVDVWSIGCIM 207
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 432 LIGKGGFGTIYKSRIGDGMEV-AVKVFH---LQCGRAFKSFDIECEIMKSIHYRNLVKII 487
+GKGGF ++ D EV A K+ L + +E I +S+ ++++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ +F +VLE SL + + + R + V +YLH N VI
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC-QYLHRNR---VI 143
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGI-TKLLIGEDQSMTQTQTLATIGYIAPEY-GREGRVF 605
H DLK N+ L++ + + DFG+ TK+ ++ T T YIAPE ++G F
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSKKGHSF 200
Query: 606 ANGDVYSFGIML 617
DV+S G ++
Sbjct: 201 -EVDVWSIGCIM 211
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 418 LEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEV-AVKVFHLQCGRAFKSFDIECEIMK 476
L++ F + ++GKG FG ++ + + A+K L+ D+EC +++
Sbjct: 11 LQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVE 68
Query: 477 ----SIHYRN--LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMID 530
S+ + + L + + +E V+E++ G L + S + D+ + +
Sbjct: 69 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAE 127
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL-LIGEDQSMTQTQTLA 589
+ L++LH +++ DLK N+LLD ++DFG+ K ++G+ ++ +
Sbjct: 128 IILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT---NEFCG 181
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
T YIAPE + + D +SFG++L E+
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEM 212
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 84/190 (44%), Gaps = 40/190 (21%)
Query: 83 ELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGN 142
++S L+ L+N +SL+ +NN ++ I P +G
Sbjct: 191 DISVLAKLTNLESLIA---TNNQISDITP----------------------------LGI 219
Query: 143 LTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGN 202
LTNL + L GN+L TL L L + L +N++ P + L KL +L LG N
Sbjct: 220 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGAN 275
Query: 203 KLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLK 262
++S ++ + L +L L L+ N I NLK L + NN S + P + SL
Sbjct: 276 QISN--ISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLT 331
Query: 263 DLQYLFLGYN 272
LQ LF YN
Sbjct: 332 KLQRLFF-YN 340
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 80 STPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEE 139
S +L+ ++ L N LV L++NN + I P ++ NL+ L +F+ ++ +
Sbjct: 76 SNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLT-GLTLFNNQITDI-----DP 129
Query: 140 IGNLTNLTAIYLGGNKLNGSIPFT-LRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLD 198
+ NLTNL + L N ++ + L LQ+L + N++ P + L L +LD
Sbjct: 130 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSF----GNQVTDLKP--LANLTTLERLD 183
Query: 199 LGGNKLSG-SILTCFSNLASL 218
+ NK+S S+L +NL SL
Sbjct: 184 ISSNKVSDISVLAKLTNLESL 204
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 9/187 (4%)
Query: 433 IGKGGFGTIYK-SRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G G FG +++ + G A K ++ E + M + + LV + +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
++ ++ E M G L + + + + + + M V L ++H N V H DL
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV---HLDL 175
Query: 552 KPSNVLLDDTMVAHLS--DFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGD 609
KP N++ L DFG+T L D + T T + APE V D
Sbjct: 176 KPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTD 232
Query: 610 VYSFGIM 616
++S G++
Sbjct: 233 MWSVGVL 239
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 101 LSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSI 160
LS NPL IL S N S L+ D+S+C + + L +L+ + L GN +
Sbjct: 39 LSFNPL-KILKSYSFSNFSE-LQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFS 96
Query: 161 PFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTC-FSNLASLR 219
P + L L+ + + KL + I +L+ L KL++ N + L FSNL +L
Sbjct: 97 PGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLV 156
Query: 220 TLSLSYN 226
+ LSYN
Sbjct: 157 HVDLSYN 163
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
Query: 162 FTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLA--SLR 219
F +L L+ + L NK G+I + L L LDL N LS S +S+L SLR
Sbjct: 322 FPTLDLPFLKSLTLTMNK--GSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLR 379
Query: 220 TLSLSYNDG-PLPLEIGNLKVLIGIDFSMNNFSSVIP-TTIGSLKDLQYLFLGY 271
L LS+N + L+ L +DF + V + SL+ L YL + Y
Sbjct: 380 HLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISY 433
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 84/190 (44%), Gaps = 40/190 (21%)
Query: 83 ELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGN 142
++S L+ L+N +SL+ +NN ++ I P +G
Sbjct: 186 DISVLAKLTNLESLIA---TNNQISDITP----------------------------LGI 214
Query: 143 LTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGN 202
LTNL + L GN+L TL L L + L +N++ P + L KL +L LG N
Sbjct: 215 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGAN 270
Query: 203 KLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLK 262
++S ++ + L +L L L+ N I NLK L + NN S + P + SL
Sbjct: 271 QISN--ISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLT 326
Query: 263 DLQYLFLGYN 272
LQ LF YN
Sbjct: 327 KLQRLFF-YN 335
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 80 STPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEE 139
S +L+ ++ L N LV L++NN + I P ++ NL+ L +F+ ++ +
Sbjct: 71 SNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLT-GLTLFNNQITDI-----DP 124
Query: 140 IGNLTNLTAIYLGGNKLNGSIPFT-LRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLD 198
+ NLTNL + L N ++ + L LQ+L + N++ P + L L +LD
Sbjct: 125 LKNLTNLNRLELSSNTISDISALSGLTSLQQLNF----GNQVTDLKP--LANLTTLERLD 178
Query: 199 LGGNKLSG-SILTCFSNLASL 218
+ NK+S S+L +NL SL
Sbjct: 179 ISSNKVSDISVLAKLTNLESL 199
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 525 LNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSM-- 582
L+I I +A +E+LH L +H DLKPSN+ V + DFG+ + +++
Sbjct: 167 LHIFIQIAEAVEFLHSKGL---MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 583 --------TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
T + T Y++PE D++S G++L E+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 547 IHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFA 606
IH DL N+LL + V + DFG+ + + + + + + ++APE +
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 279
Query: 607 NGDVYSFGIMLMEIHS 622
DV+SFG++L EI S
Sbjct: 280 QSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 531 VASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLAT 590
VA +E+L IH DL N+LL + V + DFG+ + + + + +
Sbjct: 209 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEIHS 622
+ ++APE + DV+SFG++L EI S
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 15/99 (15%)
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ 586
I ID L Y +H D+KP N+L+D L+DFG + L + ED ++ +
Sbjct: 186 IAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSV 235
Query: 587 TLATIGYIAPEY-----GREGRVFANGDVYSFGIMLMEI 620
+ T YI+PE G +GR D +S G+ + E+
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEM 274
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 30/205 (14%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVK-----VFHLQCGRAFKSFDIECEIMKSIHYRNLVKI 486
+G+G +G + K R + G +AVK V + R DI M+++ V
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS---MRTVDCPFTVTF 71
Query: 487 ISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRL------NIMIDVASVLEYLHF 540
+ E + +E M SL+K Y ++D Q + I + + LE+LH
Sbjct: 72 YGALFREGDVWICMELM-DTSLDK-FYKQ--VIDKGQTIPEDILGKIAVSIVKALEHLHS 127
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY-- 598
+ VIH D+KPSNVL++ + DFGI+ L+ + + + Y+APE
Sbjct: 128 K--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKDIDAGCKPYMAPERIN 182
Query: 599 ---GREGRVFANGDVYSFGIMLMEI 620
++G D++S GI ++E+
Sbjct: 183 PELNQKG-YSVKSDIWSLGITMIEL 206
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
IG+G G + + + G VAVK L+ + + E IM+ + N+V++ +S
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
+ +V+E + G+L + ++ ++ Q + + V L LH VIH D+
Sbjct: 142 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 196
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE------YGREGRVF 605
K ++LL LSDFG + E + + T ++APE YG E
Sbjct: 197 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPE---- 250
Query: 606 ANGDVYSFGIMLMEI 620
D++S GIM++E+
Sbjct: 251 --VDIWSLGIMVIEM 263
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
IG+G G + + + G VAVK L+ + + E IM+ + N+V++ +S
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
+ +V+E + G+L + ++ ++ Q + + V L LH VIH D+
Sbjct: 99 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 153
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE------YGREGRVF 605
K ++LL LSDFG + E + + T ++APE YG E
Sbjct: 154 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPE---- 207
Query: 606 ANGDVYSFGIMLMEI 620
D++S GIM++E+
Sbjct: 208 --VDIWSLGIMVIEM 220
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 12/191 (6%)
Query: 432 LIGKGGFGTIYKSRIGDGMEV-AVKVFH---LQCGRAFKSFDIECEIMKSIHYRNLVKII 487
+GKGGF ++ D EV A K+ L + +E I +S+ ++++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ +F +VLE SL + + + R + V +YLH N VI
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC-QYLHRNR---VI 163
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY-GREGRVFA 606
H DLK N+ L++ + + DFG+ + E + T YIAPE ++G F
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAPEVLSKKGHSF- 220
Query: 607 NGDVYSFGIML 617
DV+S G ++
Sbjct: 221 EVDVWSIGCIM 231
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
IG+G G + + + G VAVK L+ + + E IM+ + N+V++ +S
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
+ +V+E + G+L + ++ ++ Q + + V L LH VIH D+
Sbjct: 219 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 273
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE------YGREGRVF 605
K ++LL LSDFG + E + + T ++APE YG E
Sbjct: 274 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPE---- 327
Query: 606 ANGDVYSFGIMLMEI 620
D++S GIM++E+
Sbjct: 328 --VDIWSLGIMVIEM 340
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
IG+G G + + + G VAVK L+ + + E IM+ + N+V++ +S
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
+ +V+E + G+L + ++ ++ Q + + V L LH VIH D+
Sbjct: 88 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 142
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE------YGREGRVF 605
K ++LL LSDFG + E + + T ++APE YG E
Sbjct: 143 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPE---- 196
Query: 606 ANGDVYSFGIMLMEI 620
D++S GIM++E+
Sbjct: 197 --VDIWSLGIMVIEM 209
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 12/191 (6%)
Query: 432 LIGKGGFGTIYKSRIGDGMEV-AVKVFH---LQCGRAFKSFDIECEIMKSIHYRNLVKII 487
+GKGGF ++ D EV A K+ L + +E I +S+ ++++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ +F +VLE SL + + + R + V +YLH N VI
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC-QYLHRNR---VI 161
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY-GREGRVFA 606
H DLK N+ L++ + + DFG+ + E + T YIAPE ++G F
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAPEVLSKKGHSF- 218
Query: 607 NGDVYSFGIML 617
DV+S G ++
Sbjct: 219 EVDVWSIGCIM 229
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
IG+G G + + + G VAVK L+ + + E IM+ + N+V++ +S
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
+ +V+E + G+L + ++ ++ Q + + V L LH VIH D+
Sbjct: 97 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 151
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE------YGREGRVF 605
K ++LL LSDFG + E + + T ++APE YG E
Sbjct: 152 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPE---- 205
Query: 606 ANGDVYSFGIMLMEI 620
D++S GIM++E+
Sbjct: 206 --VDIWSLGIMVIEM 218
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 20/125 (16%)
Query: 121 SLEIFDMSKCNVSGGIPEEI------------------GNLTNLTAIYLGGNKLNGSIPF 162
++E + + +V GIP + LT+LT +YLGGNKL
Sbjct: 11 TVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG 70
Query: 163 TLRELQKLQYVGLKDNKLEGTIPYDIF-RLVKLYKLDLGGNKLSGSILTCFSNLASLRTL 221
+L L Y+ L N+L+ ++P +F +L +L +L L N+L F L L+ L
Sbjct: 71 VFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDL 129
Query: 222 SLSYN 226
L N
Sbjct: 130 RLYQN 134
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 172 YVGLKDNKLEGTIPYDIF-RLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GP 229
Y+ L+ N L+ ++P +F L L +L LGGNKL F+ L SL L+LS N
Sbjct: 32 YLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQS 90
Query: 230 LPLEI-GNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGD 284
LP + L L + + N S+ L L+ L L N LK S+PD V D
Sbjct: 91 LPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFD 145
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 143 LTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIF-RLVKLYKLDLGG 201
LT+LT + L N+L +L +L+ + L N+L+ ++P +F +L +L L L
Sbjct: 75 LTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQ 133
Query: 202 NKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSL 261
N+L F L SL+ + L +D P ++ L +N S V+ + GS+
Sbjct: 134 NQLKSVPDGVFDRLTSLQYIWL--HDNPWDCTCPGIRYLSEW---INKHSGVVRNSAGSV 188
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 37/211 (17%)
Query: 431 NLIGKGGFG-----------TIYKSRIGDGMEVAVKVFHLQCGRAFKSFDI--ECEIMKS 477
+IG+G FG IY +I + E+ +K C R + + +C+ + +
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEM-LKRAETACFREERDVLVNGDCQWITA 138
Query: 478 IHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYS-SNCILDIFQRLNI--MIDVASV 534
+HY + +E LV+++ G L L + + + R I M+
Sbjct: 139 LHY--------AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDS 190
Query: 535 LEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYI 594
+ LH+ +H D+KP NVLLD L+DFG + L + +D ++ + + T YI
Sbjct: 191 IHQLHY------VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYI 243
Query: 595 APEYGRE-----GRVFANGDVYSFGIMLMEI 620
+PE + G+ D +S G+ + E+
Sbjct: 244 SPEILQAMEDGMGKYGPECDWWSLGVCMYEM 274
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
IG+G G + + + G VAVK L+ + + E IM+ + N+V++ +S
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
+ +V+E + G+L + ++ ++ Q + + V L LH VIH D+
Sbjct: 92 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 146
Query: 552 KPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE------YGREGRVF 605
K ++LL LSDFG + E + + T ++APE YG E
Sbjct: 147 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPE---- 200
Query: 606 ANGDVYSFGIMLMEI 620
D++S GIM++E+
Sbjct: 201 --VDIWSLGIMVIEM 213
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + FG+ + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 37/211 (17%)
Query: 431 NLIGKGGFG-----------TIYKSRIGDGMEVAVKVFHLQCGRAFKSFDI--ECEIMKS 477
+IG+G FG IY +I + E+ +K C R + + +C+ + +
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEM-LKRAETACFREERDVLVNGDCQWITA 154
Query: 478 IHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYS-SNCILDIFQRLNI--MIDVASV 534
+HY + +E LV+++ G L L + + + R I M+
Sbjct: 155 LHY--------AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDS 206
Query: 535 LEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYI 594
+ LH+ +H D+KP NVLLD L+DFG + L + +D ++ + + T YI
Sbjct: 207 IHQLHY------VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYI 259
Query: 595 APEYGRE-----GRVFANGDVYSFGIMLMEI 620
+PE + G+ D +S G+ + E+
Sbjct: 260 SPEILQAMEDGMGKYGPECDWWSLGVCMYEM 290
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + D G+ + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 432 LIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSI-HYRNLVKIISS 489
L+G G +G +YK R + G A+KV + G + E ++K H+RN+ +
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDV-TGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 490 CSN------EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL 543
++ LV+E GS+ + N + + I +L L
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWIAYICREILRGLSHLHQ 147
Query: 544 VPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT-LATIGYIAPEY---- 598
VIH D+K NVLL + L DFG++ L D+++ + T + T ++APE
Sbjct: 148 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRNTFIGTPYWMAPEVIACD 204
Query: 599 -GREGRVFANGDVYSFGIMLMEI 620
+ D++S GI +E+
Sbjct: 205 ENPDATYDFKSDLWSLGITAIEM 227
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 36/225 (16%)
Query: 421 CRATYGFNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFDI----ECEIM 475
C + + IG+G FG ++K+R G +VA+K ++ + + F I E +I+
Sbjct: 14 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKIL 71
Query: 476 KSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLY--SSNCILDIFQRL-NIMI--- 529
+ + + N+V +I C + P+ + +Y C D+ L N+++
Sbjct: 72 QLLKHENVVNLIEICRTKA--------SPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFT 123
Query: 530 --DVASVLE-------YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL--LIGE 578
++ V++ Y+H N ++H D+K +NVL+ V L+DFG+ + L
Sbjct: 124 LSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 579 DQSMTQTQTLATIGYIAPEYGREGRVFANG-DVYSFGIMLMEIHS 622
Q + T+ Y PE R + D++ G ++ E+ +
Sbjct: 181 SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 421 CRATYGFNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFDI----ECEIM 475
C + + IG+G FG ++K+R G +VA+K ++ + + F I E +I+
Sbjct: 14 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKIL 71
Query: 476 KSIHYRNLVKIISSCSNEEFKE--------LVLEHMPHGSLEKCLYSSNCILDIFQRLNI 527
+ + + N+V +I C + LV + H L L + + + +
Sbjct: 72 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV 130
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL--LIGEDQSMTQT 585
M + + L Y+H N ++H D+K +NVL+ V L+DFG+ + L Q
Sbjct: 131 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 586 QTLATIGYIAPEYGREGRVFANG-DVYSFGIMLMEIHS 622
+ T+ Y PE R + D++ G ++ E+ +
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 421 CRATYGFNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFDI----ECEIM 475
C + + IG+G FG ++K+R G +VA+K ++ + + F I E +I+
Sbjct: 14 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKIL 71
Query: 476 KSIHYRNLVKIISSCSNEEFKE--------LVLEHMPHGSLEKCLYSSNCILDIFQRLNI 527
+ + + N+V +I C + LV + H L L + + + +
Sbjct: 72 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV 130
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL--LIGEDQSMTQT 585
M + + L Y+H N ++H D+K +NVL+ V L+DFG+ + L Q
Sbjct: 131 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 586 QTLATIGYIAPEYGREGRVFANG-DVYSFGIMLMEIHS 622
+ T+ Y PE R + D++ G ++ E+ +
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + D G+ + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 421 CRATYGFNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFDI----ECEIM 475
C + + IG+G FG ++K+R G +VA+K ++ + + F I E +I+
Sbjct: 13 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKIL 70
Query: 476 KSIHYRNLVKIISSCSNEEFKE--------LVLEHMPHGSLEKCLYSSNCILDIFQRLNI 527
+ + + N+V +I C + LV + H L L + + + +
Sbjct: 71 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV 129
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL--LIGEDQSMTQT 585
M + + L Y+H N ++H D+K +NVL+ V L+DFG+ + L Q
Sbjct: 130 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 586 QTLATIGYIAPEYGREGRVFANG-DVYSFGIMLMEIHS 622
+ T+ Y PE R + D++ G ++ E+ +
Sbjct: 187 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQ-TQTLATIGYIAPEYGREGRVFA 606
H D+KP N+L+ A+L DFGI D+ +TQ T+ T+ Y APE E
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATT--DEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 607 NGDVYSFGIMLME 619
D+Y+ +L E
Sbjct: 215 RADIYALTCVLYE 227
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 87/203 (42%), Gaps = 23/203 (11%)
Query: 427 FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDI---ECEIMKSIHYRN 482
F+ +G G FG + + + G A+K+ Q K + E I++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
LVK+ S + +V+E++ G + L + R + EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
+ +I+ DLKP N+L+D ++DFG K + G + T +APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA-----LAPEI---- 209
Query: 603 RVFANG-----DVYSFGIMLMEI 620
+ + G D ++ G+++ E+
Sbjct: 210 -ILSKGYNKAVDWWALGVLIYEM 231
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 433 IGKGGFGTIYKSRIGDGME-VAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIIS 488
IG+G +GT++K++ + E VA+K L G + C ++K + ++N+V++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELKHKNIVRLHD 68
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+++ LV E L+K S N LD + + + L + H V+H
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLH 124
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
DLKP N+L++ L+DFG+ + + + + T+ Y P+ ++++
Sbjct: 125 RDLKPQNLLINRNGELKLADFGLARAFGIPVRCY--SAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 609 -DVYSFGIMLMEIHSAKQ 625
D++S G + E+ +A +
Sbjct: 183 IDMWSAGCIFAELANAAR 200
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 34/216 (15%)
Query: 427 FNENNLIGKGGFGTI-YKSRIGDGMEVAVK--------VFHLQCGRAFKSFDIECEIMKS 477
F +L+G+G +G + + G VA+K +F L+ R E +I+K
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKILKH 65
Query: 478 IHYRNLVKIIS---SCSNEEFKEL-VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVAS 533
+ N++ I + S E F E+ +++ + L + + + D Q +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF--IYQTLR 123
Query: 534 VLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL---IGEDQSMTQTQT--- 587
++ LH + VIH DLKPSN+L++ + DFG+ +++ ++ T Q+
Sbjct: 124 AVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 588 --LATIGYIAPEYGREGRVFANG-DVYSFGIMLMEI 620
+AT Y APE ++ DV+S G +L E+
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Query: 430 NNLIGKGGFGTIYKSRIGDGMEV-AVKVFHLQCGRAFKSFDIECEIMK----SIHYRN-- 482
+ ++GKG FG ++ + + A+K L+ D+EC +++ S+ + +
Sbjct: 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLAWEHPF 79
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
L + + +E V+E++ G L + S + D+ + ++ L++LH
Sbjct: 80 LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSK- 137
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL-LIGEDQSMTQTQTLATIGYIAPEYGRE 601
+++ DLK N+LLD ++DFG+ K ++G+ ++ T YIAPE
Sbjct: 138 --GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT---NXFCGTPDYIAPEILLG 192
Query: 602 GRVFANGDVYSFGIMLMEI 620
+ + D +SFG++L E+
Sbjct: 193 QKYNHSVDWWSFGVLLYEM 211
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 31/208 (14%)
Query: 407 PPKATWRRFSYLEVCRATYG--FNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQ--- 460
PPKA L C Y ++ + +G G FG ++ + + EV VK +
Sbjct: 6 PPKAV--ELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVL 63
Query: 461 --CG---RAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSS 515
C +E I+ + + N++K++ N+ F +LV+E HGS
Sbjct: 64 EDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEK--HGSGLDLF--- 118
Query: 516 NCILDIFQRLN------IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDF 569
+D RL+ I + S + YL L +IH D+K N+++ + L DF
Sbjct: 119 -AFIDRHPRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDF 174
Query: 570 GITKLLIGEDQSMTQTQTLATIGYIAPE 597
G L ++ TI Y APE
Sbjct: 175 GSAAYL---ERGKLFYTFCGTIEYCAPE 199
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 29/159 (18%)
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLN---- 526
E ++K + + N++K+ ++ LV+E C +I R+
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVME---------CYKGGELFDEIIHRMKFNEV 136
Query: 527 ----IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLD----DTMVAHLSDFGITKLLIGE 578
I+ V S + YLH + ++H DLKP N+LL+ D ++ + DFG++ + E
Sbjct: 137 DAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIK-IVDFGLSAVF--E 190
Query: 579 DQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIML 617
+Q + + L T YIAPE R+ + DV+S G++L
Sbjct: 191 NQKKMK-ERLGTAYYIAPEVLRK-KYDEKCDVWSIGVIL 227
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G+ VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + D G+ + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 12/191 (6%)
Query: 432 LIGKGGFGTIYKSRIGDGMEV-AVKVFH---LQCGRAFKSFDIECEIMKSIHYRNLVKII 487
+GKGGF ++ D EV A K+ L + +E I +S+ ++++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
+ +F +VLE SL + + + R + V +YLH N VI
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC-QYLHRNR---VI 137
Query: 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY-GREGRVFA 606
H DLK N+ L++ + + DFG+ + E + T YIAPE ++G F
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAPEVLSKKGHSF- 194
Query: 607 NGDVYSFGIML 617
DV+S G ++
Sbjct: 195 EVDVWSIGCIM 205
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 16/200 (8%)
Query: 424 TYGFNENNLIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRN 482
T G+ IG G + + ME AVK+ + +I +++ + N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI---LLRYGQHPN 77
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSL-EKCLYSSNCILDIFQRLNIMIDVASVLEYLHFN 541
++ + + ++ +V E M G L +K L + ++ + +EYLH
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQ 135
Query: 542 FLVPVIHCDLKPSNVLLDDTM----VAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE 597
V+H DLKPSN+L D + DFG K L E+ + T ++APE
Sbjct: 136 ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL--MTPCYTANFVAPE 190
Query: 598 YGREGRVFANGDVYSFGIML 617
A D++S G++L
Sbjct: 191 VLERQGYDAACDIWSLGVLL 210
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 22/219 (10%)
Query: 406 MPPKATWRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRA 464
M PK T F YL L+GKG FG + R G A+K+ + A
Sbjct: 3 MDPKVTMNDFDYL------------KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA 50
Query: 465 FKSFD---IECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDI 521
E ++++ + L + + + V+E+ G L L +
Sbjct: 51 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 110
Query: 522 FQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS 581
R ++ S LEYLH V++ D+K N++LD ++DFG+ K I + +
Sbjct: 111 RARF-YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 166
Query: 582 MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
M T Y+APE + D + G+++ E+
Sbjct: 167 M--KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 203
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 35/208 (16%)
Query: 431 NLIGKGGFGTIYKS-RIGDGMEVAVKV-----FHLQCGRAFKSFDIECEIMKSIHYRNLV 484
+IGKG F + + G + AVK+ F G + + E I + + ++V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 485 KIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNI------------MIDVA 532
+++ + S++ +V E M L +I +R + M +
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADL---------CFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 533 SVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFGITKLLIGEDQSMTQTQTLA 589
L Y H N +IH D+KP NVLL +++ L DFG+ + +GE + +
Sbjct: 141 EALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGE-SGLVAGGRVG 195
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIML 617
T ++APE + DV+ G++L
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVIL 223
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 533 SVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIG 592
++LE +H ++H DLKP+N L+ D M+ L DFGI + + S+ + + T+
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVN 221
Query: 593 YIAPE 597
Y+ PE
Sbjct: 222 YMPPE 226
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 533 SVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIG 592
++LE +H ++H DLKP+N L+ D M+ L DFGI + + S+ + + T+
Sbjct: 116 NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVN 174
Query: 593 YIAPE 597
Y+ PE
Sbjct: 175 YMPPE 179
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G VAVK + R F+S E ++K + + N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 139
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D M G++A + R
Sbjct: 140 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMA--------GFVATRWYR 185
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DF + + D MT GY+A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEMT--------GYVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D M G++A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMA--------GFVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 39/211 (18%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G VAVK + R F+S E ++K + + N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 85
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 86 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 143
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D M G++A + R
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMA--------GFVATRWYR 189
Query: 601 EGRVFANG-------DVYSFGIMLMEIHSAK 624
+ N D++S G ++ E+ + +
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 533 SVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIG 592
++LE +H ++H DLKP+N L+ D M+ L DFGI + + S+ + + T+
Sbjct: 119 NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVN 177
Query: 593 YIAPEYGRE-GRVFANG----------DVYSFGIML 617
Y+ PE ++ NG DV+S G +L
Sbjct: 178 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 213
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 533 SVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIG 592
++LE +H ++H DLKP+N L+ D M+ L DFGI + + S+ + + T+
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVN 221
Query: 593 YIAPEYGRE-GRVFANG----------DVYSFGIML 617
Y+ PE ++ NG DV+S G +L
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 533 SVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIG 592
++LE +H ++H DLKP+N L+ D M+ L DFGI + + S+ + + T+
Sbjct: 115 NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVN 173
Query: 593 YIAPE 597
Y+ PE
Sbjct: 174 YMPPE 178
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM----VAHLSDFGITKLLIGEDQSM 582
++ + +EYLH V+H DLKPSN+L D + DFG K L E+ +
Sbjct: 121 VLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL 177
Query: 583 TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIML 617
T ++APE A D++S G++L
Sbjct: 178 --XTPCYTANFVAPEVLERQGYDAACDIWSLGVLL 210
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 526 NIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQT 585
I + + LE+LH + VIH D+KPSNVL++ DFGI+ L+ +
Sbjct: 140 KIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 586 --QTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ I PE ++G D++S GI +E+
Sbjct: 198 GCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIEL 233
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 533 SVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIG 592
++LE +H ++H DLKP+N L+ D M+ L DFGI + + S+ + + T+
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVN 193
Query: 593 YIAPE 597
Y+ PE
Sbjct: 194 YMPPE 198
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 17/201 (8%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKS----FDIECEIMKSIHYRNLVKII- 487
IG+G F T+YK + V V LQ + KS F E E +K + + N+V+
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 488 ---SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLV 544
S+ ++ LV E G+L+ L + I + + L++LH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFK-VXKIKVLRSWCRQILKGLQFLHTR-TP 150
Query: 545 PVIHCDLKPSNVLLDD-TMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR 603
P+IH DLK N+ + T + D G+ L ++ + T + APE E +
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPEXYEE-K 205
Query: 604 VFANGDVYSFGIMLMEIHSAK 624
+ DVY+FG +E +++
Sbjct: 206 YDESVDVYAFGXCXLEXATSE 226
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 13/189 (6%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEI--MKSIHYRNLVKIISSC 490
+G G FG +++ V V F + + ++ EI M +H+ L+ + +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKF-INTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 491 SNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCD 550
++ L+LE + G L + + + + + +N M L+++H + ++H D
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLD 174
Query: 551 LKPSNVLLDDTMVAHLS--DFGI-TKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFAN 607
+KP N++ + + + DFG+ TKL E + T AT + APE V
Sbjct: 175 IKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV----TTATAEFAAPEIVDREPVGFY 230
Query: 608 GDVYSFGIM 616
D+++ G++
Sbjct: 231 TDMWAIGVL 239
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 27/205 (13%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSF------DIECEIMKSIHYRNLVK 485
+G G +G++ + G VAVK + R F+S E ++K + + N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 105
Query: 486 IIS----SCSNEEFKELVL-EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF 540
++ + S EEF ++ L H+ L + D Q L + + L+Y+H
Sbjct: 106 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS 163
Query: 541 NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+IH DLKPSN+ +++ + DFG+ + D M +AT Y APE
Sbjct: 164 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--XGXVATRWYRAPEIML 215
Query: 601 EGRVFANG-DVYSFGIMLMEIHSAK 624
+ D++S G ++ E+ + +
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLN---I 527
E ++K + + N++K+ ++ LV+E G L + + F ++ I
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVI 126
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLD----DTMVAHLSDFGITKLLIGEDQSMT 583
M V S YLH + ++H DLKP N+LL+ D ++ + DFG++ +
Sbjct: 127 MKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIK-IVDFGLSAHF---EVGGK 179
Query: 584 QTQTLATIGYIAPEYGREGRVFANGDVYSFGIML 617
+ L T YIAPE R+ + DV+S G++L
Sbjct: 180 MKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVIL 212
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 12/196 (6%)
Query: 433 IGKGGFGTIYKSRIGDGME-VAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIIS 488
IG+G +GT++K++ + E VA+K L G + C ++K + ++N+V++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELKHKNIVRLHD 68
Query: 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIH 548
+++ LV E L+K S N LD + + + L + H V+H
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLH 124
Query: 549 CDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANG 608
DLKP N+L++ L++FG+ + + + + T+ Y P+ ++++
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLARAFGIPVRCY--SAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 609 -DVYSFGIMLMEIHSA 623
D++S G + E+ +A
Sbjct: 183 IDMWSAGCIFAELANA 198
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 19/204 (9%)
Query: 429 ENNLIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH-YRNLVKI 486
+ +++G+G + + E AVK+ Q G E E++ +RN++++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 487 ISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPV 546
I E+ LV E M GS+ ++ ++ + ++ DVAS L++LH +
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASALDFLHNKGIA-- 133
Query: 547 IHCDLKPSNVLLD---DTMVAHLSDFGITK--LLIGEDQSMTQTQTLATIG---YIAPE- 597
H DLKP N+L + + DFG+ L G+ ++ + L G Y+APE
Sbjct: 134 -HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 598 ---YGREGRVF-ANGDVYSFGIML 617
+ E ++ D++S G++L
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQC------GRAFKSFDIECEIMKSIHYRNLVK 485
+G G F + K R G G E A K + G + + + E I++ I + N++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N+ L+LE + G L L + + + + + + YLH
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHYLHSK---R 135
Query: 546 VIHCDLKPSNVLLDDTMVAH----LSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D V + L DFGI + ++ T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEIVNY 192
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQC------GRAFKSFDIECEIMKSIHYRNLVK 485
+G G F + K R G G E A K + G + + + E I++ I + N++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N+ L+LE + G L L + + + + + + YLH
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHYLHSK---R 149
Query: 546 VIHCDLKPSNVLLDDTMVAH----LSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D V + L DFGI + ++ T ++APE
Sbjct: 150 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEIVNY 206
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 207 EPLGLEADMWSIGVI 221
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 72
Query: 481 RNLVKIISSCSNEEFKELVLEHM-PHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE M P L + + + R VLE +
Sbjct: 73 SGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 128
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 184
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDM 207
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM----VAHLSDFGITKLLIGEDQSM 582
++ + +EYLH V+H DLKPSN+L D + DFG K L E+ +
Sbjct: 126 VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 583 TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIML 617
T ++APE + D++S GI+L
Sbjct: 183 --MTPCYTANFVAPEVLKRQGYDEGCDIWSLGILL 215
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFGITKLLIGEDQSMT 583
IM + S + ++H V V+H DLKP N+L +D + + DFG +L ++Q +
Sbjct: 111 IMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL- 166
Query: 584 QTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAK 624
T+ Y APE + + D++S G++L + S +
Sbjct: 167 -KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 19/160 (11%)
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILD--------IF 522
E ++++ + ++N+++++ NEE +++ + +E C+ +LD +
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYM------VMEYCVCGMQEMLDSVPEKRFPVC 109
Query: 523 QRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSM 582
Q + LEYLH +V H D+KP N+LL +S G+ + L
Sbjct: 110 QAHGYFCQLIDGLEYLHSQGIV---HKDIKPGNLLLTTGGTLKISALGVAEALHPFAADD 166
Query: 583 TQTQTLATIGYIAPEYGREGRVFA--NGDVYSFGIMLMEI 620
T + + + PE F+ D++S G+ L I
Sbjct: 167 TCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNI 206
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 419 EVCRATYGFNENNLIGKGGFGTIYKSRIGD---GMEVAVKVFHLQCGRAFKSFDIECEIM 475
EV AT+ +G+G FG ++ R+ D G + AVK L+ RA + + C +
Sbjct: 72 EVHWATHQLR----LGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAEEL--MACAGL 123
Query: 476 KSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVL 535
S +V + + + + +E + GSL + + C+ + + L + L
Sbjct: 124 TSP---RIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPED-RALYYLGQALEGL 179
Query: 536 EYLHFNFLVPVIHCDLKPSNVLL-DDTMVAHLSDFGITKLL----IGEDQSMTQTQTLAT 590
EYLH ++H D+K NVLL D A L DFG L +G+D +T T
Sbjct: 180 EYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDL-LTGDYIPGT 235
Query: 591 IGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
++APE A DV+S M++ +
Sbjct: 236 ETHMAPEVVLGRSCDAKVDVWSSCCMMLHM 265
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSRI-GDGMEVAVKVFHLQC------GRAFKSFDIECEIMKSIHYRNLVK 485
+G G F + K R G G E A K + G + + + E I++ I + N++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N+ L+LE + G L L + + + + + + YLH
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHYLHSK---R 128
Query: 546 VIHCDLKPSNVLLDDTMVAH----LSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D V + L DFGI + ++ T ++APE
Sbjct: 129 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEIVNY 185
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 186 EPLGLEADMWSIGVI 200
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 527 IMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM----VAHLSDFGITKLLIGEDQSM 582
++ + +EYLH V+H DLKPSN+L D + DFG K L E+ +
Sbjct: 126 VLHTIGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 583 TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIML 617
T ++APE + D++S GI+L
Sbjct: 183 --MTPCYTANFVAPEVLKRQGYDEGCDIWSLGILL 215
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 30/198 (15%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIM--KSIHYRNLVKIISSC 490
IG G FG R E+ V V +++ G + +++ EI+ +S+ + N+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNEL-VAVKYIERGEKIAA-NVKREIINHRSLRHPNIVRFKEVI 84
Query: 491 SNEEFKELVLEHMPHGSLEKCL-----YSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+V+E+ G L + + +S + FQ+L S + Y H +
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCH---AMQ 135
Query: 546 VIHCDLKPSNVLLDDTMVAHLS--DFGITKLLIGEDQSMTQTQTLATIGYIAPEY----G 599
V H DLK N LLD + L DFG +K + Q + T+ T YIAPE
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TVGTPAYIAPEVLLKKE 192
Query: 600 REGRVFANGDVYSFGIML 617
+G+V DV+S G+ L
Sbjct: 193 YDGKV---ADVWSCGVTL 207
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 471 ECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLN---I 527
E ++K + + N++K+ ++ LV+E G L + + F ++ I
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVI 109
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLD----DTMVAHLSDFGITKLLIGEDQSMT 583
M V S YLH + ++H DLKP N+LL+ D ++ + DFG++ +
Sbjct: 110 MKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIK-IVDFGLSAHF---EVGGK 162
Query: 584 QTQTLATIGYIAPEYGREGRVFANGDVYSFGIML 617
+ L T YIAPE R+ + DV+S G++L
Sbjct: 163 MKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVIL 195
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 30/198 (15%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIM--KSIHYRNLVKIISSC 490
IG G FG R E+ V V +++ G +++ EI+ +S+ + N+V+
Sbjct: 27 IGAGNFGVARLMRDKQANEL-VAVKYIERGEKIDE-NVKREIINHRSLRHPNIVRFKEVI 84
Query: 491 SNEEFKELVLEHMPHGSLEKCL-----YSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+V+E+ G L + + +S + FQ+L S + Y H +
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYAH---AMQ 135
Query: 546 VIHCDLKPSNVLLDDTMVAHL--SDFGITKLLIGEDQSMTQTQTLATIGYIAPEY----G 599
V H DLK N LLD + L +DFG +K + Q + + T YIAPE
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS---AVGTPAYIAPEVLLKKE 192
Query: 600 REGRVFANGDVYSFGIML 617
+G+V DV+S G+ L
Sbjct: 193 YDGKV---ADVWSCGVTL 207
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 547 IHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFA 606
IH DL N+LL + + DFG+ + + + + + + ++APE
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 607 NGDVYSFGIMLMEIHS 622
DV+S+GI L E+ S
Sbjct: 250 ESDVWSYGIFLWELFS 265
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 533 SVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIG 592
++LE +H ++H DLKP+N L+ D M+ L DFGI + + S+ + + +
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGAVN 221
Query: 593 YIAPE 597
Y+ PE
Sbjct: 222 YMPPE 226
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 20/193 (10%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIM--KSIHYRNLVKIISSC 490
IG G FG R E+ V V +++ G A +++ EI+ +S+ + N+V+
Sbjct: 28 IGSGNFGVARLMRDKLTKEL-VAVKYIERGAAIDE-NVQREIINHRSLRHPNIVRFKEVI 85
Query: 491 SNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCD 550
+++E+ G L Y C F +L + + + + H D
Sbjct: 86 LTPTHLAIIMEYASGGEL----YERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRD 141
Query: 551 LKPSNVLLDDTMVAHLS--DFGITKLLIGEDQSMTQTQTLATIGYIAPE----YGREGRV 604
LK N LLD + L DFG +K + Q + T+ T YIAPE +G++
Sbjct: 142 LKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TVGTPAYIAPEVLLRQEYDGKI 198
Query: 605 FANGDVYSFGIML 617
DV+S G+ L
Sbjct: 199 ---ADVWSCGVTL 208
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 427 FNENNLIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSI------H 479
FN ++GKG FG + S R G AVK+ L+ + D+EC +++
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPGK 79
Query: 480 YRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
L ++ S + V+E++ G L +Y + F+ + + A + L
Sbjct: 80 PPFLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQV-GRFKEPHAVFYAAEIAIGLF 135
Query: 540 FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYG 599
F +I+ DLK NV+LD ++DFG+ K I + +T T YIAPE
Sbjct: 136 FLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAPEII 193
Query: 600 REGRVFANGDVYSFGIMLMEI 620
+ D ++FG++L E+
Sbjct: 194 AYQPYGKSVDWWAFGVLLYEM 214
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 547 IHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFA 606
IH DL N+LL + + DFG+ + + + + + + ++APE
Sbjct: 183 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 242
Query: 607 NGDVYSFGIMLMEIHS 622
DV+S+GI L E+ S
Sbjct: 243 ESDVWSYGIFLWELFS 258
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 27/207 (13%)
Query: 427 FNENNLIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSI------H 479
FN ++GKG FG + S R G AVK+ L+ + D+EC +++
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPGK 400
Query: 480 YRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
L ++ S + V+E++ G L +Y + F+ + + A + L
Sbjct: 401 PPFLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQV-GRFKEPHAVFYAAEIAIGLF 456
Query: 540 FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE-- 597
F +I+ DLK NV+LD ++DFG+ K I + +T T YIAPE
Sbjct: 457 FLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAPEII 514
Query: 598 ----YGREGRVFANGDVYSFGIMLMEI 620
YG+ + D ++FG++L E+
Sbjct: 515 AYQPYGK------SVDWWAFGVLLYEM 535
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 547 IHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFA 606
IH DL N+LL + + DFG+ + + + + + + ++APE
Sbjct: 167 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 226
Query: 607 NGDVYSFGIMLMEIHS 622
DV+S+GI L E+ S
Sbjct: 227 ESDVWSYGIFLWELFS 242
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 547 IHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFA 606
IH DL N+LL + + DFG+ + + + + + + ++APE
Sbjct: 185 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 244
Query: 607 NGDVYSFGIMLMEIHS 622
DV+S+GI L E+ S
Sbjct: 245 ESDVWSYGIFLWELFS 260
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 547 IHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFA 606
IH DL N+LL + + DFG+ + + + + + + ++APE
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 607 NGDVYSFGIMLMEIHS 622
DV+S+GI L E+ S
Sbjct: 250 ESDVWSYGIFLWELFS 265
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 533 SVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIG 592
++LE +H ++H DLKP+N L+ D M+ L DFGI + + + + + T+
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQVGTVN 193
Query: 593 YIAPE 597
Y+ PE
Sbjct: 194 YMPPE 198
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 430 NNLIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH-YRNLVKII 487
+ L+G+G + + + + +G E AVK+ Q G + E E + +N++++I
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVI 547
++ LV E + GS+ + + + ++ DVA+ L++LH +
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQK-HFNEREASRVVRDVAAALDFLHTK---GIA 133
Query: 548 HCDLKPSNVLLD 559
H DLKP N+L +
Sbjct: 134 HRDLKPENILCE 145
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 30/198 (15%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIM--KSIHYRNLVKIISSC 490
IG G FG R E+ V V +++ G +++ EI+ +S+ + N+V+
Sbjct: 26 IGSGNFGVARLMRDKQSNEL-VAVKYIERGEKIDE-NVKREIINHRSLRHPNIVRFKEVI 83
Query: 491 SNEEFKELVLEHMPHGSLEKCL-----YSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+V+E+ G L + + +S + FQ+L S + Y H +
Sbjct: 84 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCH---AMQ 134
Query: 546 VIHCDLKPSNVLLDDTMVAHLS--DFGITKLLIGEDQSMTQTQTLATIGYIAPEY----G 599
V H DLK N LLD + L DFG +K + Q + T+ T YIAPE
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TVGTPAYIAPEVLLKKE 191
Query: 600 REGRVFANGDVYSFGIML 617
+G+V DV+S G+ L
Sbjct: 192 YDGKV---ADVWSCGVTL 206
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 10/198 (5%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFD---IECEIMKSIHYRN 482
F+ L+GKG FG + R G A+K+ + A E ++++ +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
L + + + V+E+ G L L + R ++ S LEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLHSR- 124
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
V++ D+K N++LD ++DFG+ K I + +M T Y+APE +
Sbjct: 125 --DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KTFCGTPEYLAPEVLEDN 180
Query: 603 RVFANGDVYSFGIMLMEI 620
D + G+++ E+
Sbjct: 181 DYGRAVDWWGLGVVMYEM 198
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 20/196 (10%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQ----CGRAFKSFDIECE--IMKSIHYRNLVK 485
+G G F + K R G++ A K + R DIE E I+K I + N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N+ L+LE + G L L + + + + + + + YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGIT-KLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+ H DLKP N++L D V + DFG+ K+ G + T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPAFVAPEIVN 190
Query: 601 EGRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 191 YEPLGLEADMWSIGVI 206
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 10/198 (5%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFD---IECEIMKSIHYRN 482
F+ L+GKG FG + R G A+K+ + A E ++++ +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
L + + + V+E+ G L L + R ++ S LEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLHSR- 124
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
V++ D+K N++LD ++DFG+ K I + +M T Y+APE +
Sbjct: 125 --DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KXFCGTPEYLAPEVLEDN 180
Query: 603 RVFANGDVYSFGIMLMEI 620
D + G+++ E+
Sbjct: 181 DYGRAVDWWGLGVVMYEM 198
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 10/198 (5%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFD---IECEIMKSIHYRN 482
F+ L+GKG FG + R G A+K+ + A E ++++ +
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
L + + + V+E+ G L L + R ++ S LEYLH
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLHSR- 127
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
V++ D+K N++LD ++DFG+ K I + +M T Y+APE +
Sbjct: 128 --DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KTFCGTPEYLAPEVLEDN 183
Query: 603 RVFANGDVYSFGIMLMEI 620
D + G+++ E+
Sbjct: 184 DYGRAVDWWGLGVVMYEM 201
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 546 VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVF 605
+ H D+KPSN+L+D LSDFG ++ ++ D+ + ++ T ++ PE+ +
Sbjct: 173 ICHRDVKPSNILMDKNGRVKLSDFGESEYMV--DKKIKGSR--GTYEFMPPEFFSNESSY 228
Query: 606 --ANGDVYSFGIML 617
A D++S GI L
Sbjct: 229 NGAKVDIWSLGICL 242
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 10/198 (5%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFD---IECEIMKSIHYRN 482
F+ L+GKG FG + R G A+K+ + A E ++++ +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
L + + + V+E+ G L L + R ++ S LEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLHSR- 124
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
V++ D+K N++LD ++DFG+ K I + +M T Y+APE +
Sbjct: 125 --DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KTFCGTPEYLAPEVLEDN 180
Query: 603 RVFANGDVYSFGIMLMEI 620
D + G+++ E+
Sbjct: 181 DYGRAVDWWGLGVVMYEM 198
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFK------SFDIECEIMKSIHYRNLVK 485
+G G F + K R G+E A K + RA + + E I++ + + N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N L+LE + G L L + + + + + + + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---K 135
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D + L DFG+ + + + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNY 192
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 10/198 (5%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFD---IECEIMKSIHYRN 482
F+ L+GKG FG + R G A+K+ + A E ++++ +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
L + + + V+E+ G L L + R ++ S LEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLHSR- 124
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
V++ D+K N++LD ++DFG+ K I + +M T Y+APE +
Sbjct: 125 --DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KXFCGTPEYLAPEVLEDN 180
Query: 603 RVFANGDVYSFGIMLMEI 620
D + G+++ E+
Sbjct: 181 DYGRAVDWWGLGVVMYEM 198
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFK------SFDIECEIMKSIHYRNLVK 485
+G G F + K R G+E A K + RA + + E I++ + + N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N L+LE + G L L + + + + + + + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---K 135
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D + L DFG+ + + + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNY 192
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFK------SFDIECEIMKSIHYRNLVK 485
+G G F + K R G+E A K + RA + + E I++ + + N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N L+LE + G L L + + + + + + + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---K 135
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D + L DFG+ + + + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNY 192
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 78/201 (38%), Gaps = 18/201 (8%)
Query: 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK 485
F + +G G +G ++K R DG AVK + F+ + + V
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVK----RSMSPFRGPKDRARKLAEVGSHEKVG 114
Query: 486 IISSC-----SNEEFKELVLEHMPHG-SLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
C + EE L L+ G SL++ + L Q + D L +LH
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH 174
Query: 540 FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYG 599
LV H D+KP+N+ L L DFG+ L Q Y+APE
Sbjct: 175 SQGLV---HLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDPRYMAPEL- 227
Query: 600 REGRVFANGDVYSFGIMLMEI 620
+G DV+S G+ ++E+
Sbjct: 228 LQGSYGTAADVFSLGLTILEV 248
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFK------SFDIECEIMKSIHYRNLVK 485
+G G F + K R G+E A K + RA + + E I++ + + N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N L+LE + G L L + + + + + + + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---K 135
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D + L DFG+ + + + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNY 192
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFK------SFDIECEIMKSIHYRNLVK 485
+G G F + K R G+E A K + RA + + E I++ + + N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N L+LE + G L L + + + + + + + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---K 135
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D + L DFG+ + + + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNY 192
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQ----CGRAFKSFDIECE--IMKSIHYRNLVK 485
+G G F + K R G++ A K + R DIE E I+K I + N++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N+ L+LE + G L L + + + + + + + YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D V + DFG+ + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQ----CGRAFKSFDIECE--IMKSIHYRNLVK 485
+G G F + K R G++ A K + R DIE E I+K I + N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N+ L+LE + G L L + + + + + + + YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D V + DFG+ + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 10/198 (5%)
Query: 427 FNENNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFD---IECEIMKSIHYRN 482
F+ L+GKG FG + R G A+K+ + A E ++++ +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 483 LVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF 542
L + + + V+E+ G L L + R ++ S LEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLHSR- 124
Query: 543 LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG 602
V++ D+K N++LD ++DFG+ K I + +M T Y+APE +
Sbjct: 125 --DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KXFCGTPEYLAPEVLEDN 180
Query: 603 RVFANGDVYSFGIMLMEI 620
D + G+++ E+
Sbjct: 181 DYGRAVDWWGLGVVMYEM 198
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQ----CGRAFKSFDIECE--IMKSIHYRNLVK 485
+G G F + K R G++ A K + R DIE E I+K I + N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N+ L+LE + G L L + + + + + + + YLH +
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 133
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D V + DFG+ + D T ++APE
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 190
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 191 EPLGLEADMWSIGVI 205
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQ----CGRAFKSFDIECE--IMKSIHYRNLVK 485
+G G F + K R G++ A K + R DIE E I+K I + N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N+ L+LE + G L L + + + + + + + YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D V + DFG+ + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQ----CGRAFKSFDIECE--IMKSIHYRNLVK 485
+G G F + K R G++ A K + R DIE E I+K I + N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N+ L+LE + G L L + + + + + + + YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D V + DFG+ + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 460 QCGRAFKSFDIECEIMKSIHYRNLVKIIS----SCSNEEFKE--LVLEHMPHGSLEKCLY 513
RA++ E +MK ++++N++ +++ S EEF++ +V+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI- 119
Query: 514 SSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITK 573
LD + ++ + +++LH +IH DLKPSN+++ + DFG+ +
Sbjct: 120 --QMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
S T + T Y APE N D++S G+++ E+
Sbjct: 175 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEM 218
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQ----CGRAFKSFDIECE--IMKSIHYRNLVK 485
+G G F + K R G++ A K + R DIE E I+K I + N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N+ L+LE + G L L + + + + + + + YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D V + DFG+ + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQ----CGRAFKSFDIECE--IMKSIHYRNLVK 485
+G G F + K R G++ A K + R DIE E I+K I + N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N+ L+LE + G L L + + + + + + + YLH +
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 133
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D V + DFG+ + D T ++APE
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 190
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 191 EPLGLEADMWSIGVI 205
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 422 RATYGFNENNLIGKGGFGTIYK--SRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSI- 478
R T F+E IG G FG+++K R+ DG A+K + + E+
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 66
Query: 479 --HYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRL---NIMIDVAS 533
+ ++V+ S+ + ++ + E+ GSL + + I+ F+ ++++ V
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 534 VLEYLHFNFLVPVIHCDLKPSNVLLDDTMV 563
L Y+H LV H D+KPSN+ + T +
Sbjct: 127 GLRYIHSMSLV---HMDIKPSNIFISRTSI 153
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQ----CGRAFKSFDIECE--IMKSIHYRNLVK 485
+G G F + K R G++ A K + R DIE E I+K I + N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N+ L+LE + G L L + + + + + + + YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D V + DFG+ + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 422 RATYGFNENNLIGKGGFGTIYK--SRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSI- 478
R T F+E IG G FG+++K R+ DG A+K + + E+
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 62
Query: 479 --HYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRL---NIMIDVAS 533
+ ++V+ S+ + ++ + E+ GSL + + I+ F+ ++++ V
Sbjct: 63 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 122
Query: 534 VLEYLHFNFLVPVIHCDLKPSNVLLDDTMV 563
L Y+H LV H D+KPSN+ + T +
Sbjct: 123 GLRYIHSMSLV---HMDIKPSNIFISRTSI 149
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 419 EVCRATYGFNENNLIGKGGFGTIYKSRIGD---GMEVAVKVFHLQCGRAFKSFDIECEIM 475
EV AT+ +G+G FG ++ R+ D G + AVK L+ RA + + C +
Sbjct: 91 EVHWATHQLR----LGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAEEL--MACAGL 142
Query: 476 KSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVL 535
S +V + + + + +E + GSL + + C+ + + L + L
Sbjct: 143 TSP---RIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPED-RALYYLGQALEGL 198
Query: 536 EYLHFNFLVPVIHCDLKPSNVLL-DDTMVAHLSDFGITKLLI--GEDQS-MTQTQTLATI 591
EYLH ++H D+K NVLL D A L DFG L G +S +T T
Sbjct: 199 EYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTE 255
Query: 592 GYIAPEYGREGRVFANGDVYSFGIMLMEI 620
++APE A DV+S M++ +
Sbjct: 256 THMAPEVVLGRSCDAKVDVWSSCCMMLHM 284
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQ----CGRAFKSFDIECE--IMKSIHYRNLVK 485
+G G F + K R G++ A K + R DIE E I+K I + N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N+ L+LE + G L L + + + + + + + YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D V + DFG+ + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 422 RATYGFNENNLIGKGGFGTIYK--SRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSI- 478
R T F+E IG G FG+++K R+ DG A+K + + E+
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 64
Query: 479 --HYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRL---NIMIDVAS 533
+ ++V+ S+ + ++ + E+ GSL + + I+ F+ ++++ V
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 534 VLEYLHFNFLVPVIHCDLKPSNVLLDDTMV 563
L Y+H LV H D+KPSN+ + T +
Sbjct: 125 GLRYIHSMSLV---HMDIKPSNIFISRTSI 151
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 460 QCGRAFKSFDIECEIMKSIHYRNLVKIIS----SCSNEEFKE--LVLEHMPHGSLEKCLY 513
RA++ E +MK ++++N++ +++ S EEF++ +V+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI- 119
Query: 514 SSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITK 573
LD + ++ + +++LH +IH DLKPSN+++ + DFG+ +
Sbjct: 120 --QMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
S T + T Y APE N D++S G+++ E+
Sbjct: 175 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEM 218
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 21/219 (9%)
Query: 406 MPPKATWRRFSYLEVCRATYGFNENNLIGKGGFG-TIYKSRIGDGMEVAVKVFHLQCGRA 464
M P+ T F YL+ L+GKG FG I G A+K+ + A
Sbjct: 3 MDPRVTMNEFEYLK------------LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA 50
Query: 465 FKSFD---IECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDI 521
E ++++ + L + S + V+E+ G L L +
Sbjct: 51 KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED 110
Query: 522 FQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS 581
R ++ S L+YLH V++ DLK N++LD ++DFG+ K I + +
Sbjct: 111 RARF-YGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT 167
Query: 582 MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
M T Y+APE + D + G+++ E+
Sbjct: 168 M--KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 204
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 142 NLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIF-RLVKLYKLDLG 200
+LT L +YLGGN+L L KL+ + L N+L+ +IP F +L L L L
Sbjct: 105 HLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLS 163
Query: 201 GNKLSGSILTCFSNLASLRTLSL 223
N+L F L L+T++L
Sbjct: 164 TNQLQSVPHGAFDRLGKLQTITL 186
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Query: 143 LTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIF-RLVKLYKLDLGG 201
LT LT + L N+L +L +L +GL +N+L ++P +F L +L KL LGG
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGG 116
Query: 202 NKLSGSILTCFSNLASLRTLSLSYND-GPLPL-EIGNLKVLIGIDFSMNNFSSVIPTTIG 259
N+L F L L+ L L+ N +P L L + S N SV
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFD 176
Query: 260 SLKDLQYLFL 269
L LQ + L
Sbjct: 177 RLGKLQTITL 186
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 142 NLTNLTAIYLGGNKLNGSIPF-TLRELQKLQYVGLKDNKLEGTIPYDIF-RLVKLYKLDL 199
+LT L + L N+L S+P L +L + L N+L+ ++P +F RL KL +L L
Sbjct: 81 DLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRL 138
Query: 200 GGNKLSGSILTCFSNLASLRTLSLSYN 226
N+L F L +L+TLSLS N
Sbjct: 139 NTNQLQSIPAGAFDKLTNLQTLSLSTN 165
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 142 NLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIF-RLVKLYKLDLG 200
+LT L +YLGGN+L L KL+ + L N+L+ +IP F +L L L L
Sbjct: 105 HLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLS 163
Query: 201 GNKLSGSILTCFSNLASLRTLSL 223
N+L F L L+T++L
Sbjct: 164 TNQLQSVPHGAFDRLGKLQTITL 186
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Query: 143 LTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIF-RLVKLYKLDLGG 201
LT LT + L N+L +L +L +GL +N+L ++P +F L +L KL LGG
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGG 116
Query: 202 NKLSGSILTCFSNLASLRTLSLSYND-GPLPL-EIGNLKVLIGIDFSMNNFSSVIPTTIG 259
N+L F L L+ L L+ N +P L L + S N SV
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFD 176
Query: 260 SLKDLQYLFL 269
L LQ + L
Sbjct: 177 RLGKLQTITL 186
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 142 NLTNLTAIYLGGNKLNGSIPF-TLRELQKLQYVGLKDNKLEGTIPYDIF-RLVKLYKLDL 199
+LT L + L N+L S+P L +L + L N+L+ ++P +F RL KL +L L
Sbjct: 81 DLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRL 138
Query: 200 GGNKLSGSILTCFSNLASLRTLSLSYN 226
N+L F L +L+TLSLS N
Sbjct: 139 NTNQLQSIPAGAFDKLTNLQTLSLSTN 165
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 104/224 (46%), Gaps = 31/224 (13%)
Query: 414 RFSYLEVCRATYG----FNENNLIGKGGFGTIYKS-RIGDGMEVAVKVF------HLQCG 462
+F +EV +T+ + + IG G G + + G+ VAVK
Sbjct: 9 QFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAK 68
Query: 463 RAFKSFDIECEIMKSIHYRNLVKIISSCSN----EEFKE--LVLEHMPHGSLEKCLYSSN 516
RA++ E ++K ++++N++ +++ + EEF++ LV+E M +L + ++
Sbjct: 69 RAYR----ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME- 122
Query: 517 CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576
LD + ++ + +++LH +IH DLKPSN+++ + DFG+ +
Sbjct: 123 --LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 177
Query: 577 GEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
+ T + T Y APE AN D++S G ++ E+
Sbjct: 178 T---NFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGEL 218
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 20/196 (10%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQ----CGRAFKSFDIECE--IMKSIHYRNLVK 485
+G G F + K R G++ A K + R DIE E I+K I + N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N+ L+LE + G L L + + + + + + + YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGIT-KLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+ H DLKP N++L D V + DFG+ K+ G + T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPEFVAPEIVN 190
Query: 601 EGRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 191 YEPLGLEADMWSIGVI 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA 589
+++ L YLH +I+ DLK NVLLD L+D+G+ K G T +
Sbjct: 129 EISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCG 183
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAK 624
T YIAPE R + D ++ G+++ E+ + +
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 430 NNLIGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH-YRNLVKII 487
++ +GGF +Y+++ +G G E A+K ++ E MK + + N+V+
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFC 92
Query: 488 SSCS---------NEEFKELVLEHMPHGSLEKCL--YSSNCILDIFQRLNIMIDVASVLE 536
S+ S EF L+L + G L + L S L L I ++
Sbjct: 93 SAASIGKEESDTGQAEF--LLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 537 YLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFG 570
++H P+IH DLK N+LL + L DFG
Sbjct: 151 HMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFG 183
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQ----CGRAFKSFDIECE--IMKSIHYRNLVK 485
+G G F + K R G++ A K + R DIE E I+K I + N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N+ L+LE + G L L + + + + + + + YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D V + DFG+ + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 422 RATYGFNENNLIGKGGFGTIYK--SRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSI- 478
R T F+E IG G FG+++K R+ DG A+K + + E+
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 64
Query: 479 --HYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRL---NIMIDVAS 533
+ ++V+ S+ + ++ + E+ GSL + + I+ F+ ++++ V
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 534 VLEYLHFNFLVPVIHCDLKPSNVLLDDTMV 563
L Y+H LV H D+KPSN+ + T +
Sbjct: 125 GLRYIHSMSLV---HMDIKPSNIFISRTSI 151
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 19/204 (9%)
Query: 429 ENNLIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH-YRNLVKI 486
+ +++G+G + + E AVK+ Q G E E++ +RN++++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 487 ISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPV 546
I E+ LV E M GS+ ++ ++ + ++ DVAS L++LH +
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASALDFLHNKGIA-- 133
Query: 547 IHCDLKPSNVLLDD-TMVAHLS----DFGITKLLIGEDQSMTQTQTLATIG---YIAPE- 597
H DLKP N+L + V+ + D G L G+ ++ + L G Y+APE
Sbjct: 134 -HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 598 ---YGREGRVF-ANGDVYSFGIML 617
+ E ++ D++S G++L
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA 589
+++ L YLH +I+ DLK NVLLD L+D+G+ K G T +
Sbjct: 114 EISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCG 168
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAK 624
T YIAPE R + D ++ G+++ E+ + +
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA 589
+++ L YLH +I+ DLK NVLLD L+D+G+ K G T +
Sbjct: 161 EISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSTFCG 215
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAK 624
T YIAPE R + D ++ G+++ E+ + +
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA 589
+++ L YLH +I+ DLK NVLLD L+D+G+ K G T +
Sbjct: 118 EISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCG 172
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAK 624
T YIAPE R + D ++ G+++ E+ + +
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 115
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 116 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 171
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 227
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDM 250
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQ----CGRAFKSFDIECE--IMKSIHYRNLVK 485
+G G F + K R G++ A K + R DIE E I+K I + N++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N+ L+LE + G L L + + + + + + + YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D V + DFG+ + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 58/217 (26%)
Query: 433 IGKGGFGTIYKSRIGDGMEV-AVKVFHLQCGRAFKSFDIE-----CEIMKSIHYRNLVKI 486
IG+G +G + + + A+K+ + R D+E +MK +H+ N+ ++
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 487 ISSCSNEEFKELVLEHMPHG-------------SLEKC---------------------- 511
+E++ LV+E + HG S KC
Sbjct: 94 YEVYEDEQYICLVME-LCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAING 152
Query: 512 -LYSSNCILDIFQRL----NIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL--DDTMVA 564
++ LD QR NIM + S L YLH + H D+KP N L + +
Sbjct: 153 SIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEI 209
Query: 565 HLSDFGIT----KLLIGEDQSMTQTQTLATIGYIAPE 597
L DFG++ KL GE MT T ++APE
Sbjct: 210 KLVDFGLSKEFYKLNNGEYYGMTTKA--GTPYFVAPE 244
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 88
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 89 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 144
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 200
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDM 223
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 88
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 89 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 144
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 200
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDM 223
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 87
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 88 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 143
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 199
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDM 222
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 101
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 102 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 157
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 213
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDM 236
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 115
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 116 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 171
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 227
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDM 250
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 100
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 101 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 156
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 212
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDM 235
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 427 FNENNLIGKGGFGTIY-KSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKS-----IHY 480
FN ++GKG FG + R G A+K+ L+ + D+EC +++ +
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKI--LKKDVVIQDDDVECTMVEKRVLALLDK 78
Query: 481 RNLVKIISSC-SNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+ + SC + V+E++ G L +Y + F+ + A + L
Sbjct: 79 PPFLTQLHSCFQTVDRLYFVMEYVNGGDL---MYHIQQV-GKFKEPQAVFYAAEISIGLF 134
Query: 540 FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYG 599
F +I+ DLK NV+LD ++DFG+ K + + +T + T YIAPE
Sbjct: 135 FLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD--GVTTREFCGTPDYIAPEII 192
Query: 600 REGRVFANGDVYSFGIMLMEI 620
+ D +++G++L E+
Sbjct: 193 AYQPYGKSVDWWAYGVLLYEM 213
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 73
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 74 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 129
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 185
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDM 208
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 100
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 101 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 156
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 212
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDM 235
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 88
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 89 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 144
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 200
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDM 223
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 101
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 102 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 157
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 213
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDM 236
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 100
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 101 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 156
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 212
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDM 235
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 101
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 102 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 157
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 213
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDM 236
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 101
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 102 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 157
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 213
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDM 236
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 120
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 121 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 176
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 177 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 232
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 233 IRYHRYHGRSAAVWSLGILLYDM 255
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 100
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 101 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 156
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 212
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDM 235
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 87
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 88 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 143
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 199
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDM 222
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 18/195 (9%)
Query: 433 IGKGGFGTIYKSR-IGDGMEVAVKVFHLQCGRAFK------SFDIECEIMKSIHYRNLVK 485
+G G F + K R G+E A K + RA + + E I++ + + N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ N L+LE + G L L + + + + + + + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---K 135
Query: 546 VIHCDLKPSNVLLDDTMVA----HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE 601
+ H DLKP N++L D + L DFG+ + + + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNY 192
Query: 602 GRVFANGDVYSFGIM 616
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 72
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 73 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 128
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 184
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDM 207
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 107
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 108 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 163
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 164 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 219
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 220 IRYHRYHGRSAAVWSLGILLYDM 242
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 73
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 74 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 129
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 185
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDM 208
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 73
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 74 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 129
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 185
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDM 208
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 68
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 69 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 124
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 125 HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 180
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDM 203
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 460 QCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN----EEFKE--LVLEHMPHGSLEKCLY 513
RA++ E +MK ++++N++ +++ + EEF++ LV+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI- 119
Query: 514 SSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITK 573
LD + ++ + +++LH +IH DLKPSN+++ + DFG+ +
Sbjct: 120 --QMELDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
S T + T Y APE N D++S G ++ E+
Sbjct: 175 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDI--------ECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R ++ E ++K + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 68
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 69 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 124
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 180
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDM 203
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFK--------SFDIECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R +E ++K + +
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 95
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 96 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 151
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 152 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 207
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 208 IRYHRYHGRSAAVWSLGILLYDM 230
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDI--------ECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R ++ E ++K + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 68
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 69 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 124
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 180
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDM 203
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 433 IGKGGFGTIYKS-RIGDGMEVAVKVFHLQ------CGRAFKSFDIECEIMKSIHYRNLVK 485
+G+G +G +YK+ VA+K L+ G A + E ++K + +RN+++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR----EVSLLKELQHRNIIE 97
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ S + L+ E+ L+K + + D+ R+ I + ++ ++F
Sbjct: 98 LKSVIHHNHRLHLIFEYA-ENDLKKYMDKNP---DVSMRV-IKSFLYQLINGVNFCHSRR 152
Query: 546 VIHCDLKPSNVLL-----DDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600
+H DLKP N+LL +T V + DFG+ + + T + T+ Y PE
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF--THEIITLWYRPPEILL 210
Query: 601 EGRVFANG-DVYSFGIMLMEI 620
R ++ D++S + E+
Sbjct: 211 GSRHYSTSVDIWSIACIWAEM 231
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 31/218 (14%)
Query: 421 CRATYGFNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFH------LQCGRAFKSFDIECE 473
RA Y + +G G +G + + G G +VA+K + L RA++ E
Sbjct: 23 VRAVY--RDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR----ELR 76
Query: 474 IMKSIHYRNLVKIISSCSNEE----FKELVLEHMPH--GSLEKCLYSSNCILDIFQRLNI 527
++K + + N++ ++ + +E F + L MP L K + D Q L
Sbjct: 77 LLKHMRHENVIGLLDVFTPDETLDDFTDFYLV-MPFMGTDLGKLMKHEKLGEDRIQFL-- 133
Query: 528 MIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQT 587
V +L+ L + +IH DLKP N+ +++ + DFG+ + E
Sbjct: 134 ---VYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MXGX 185
Query: 588 LATIGYIAPEYGREG-RVFANGDVYSFGIMLMEIHSAK 624
+ T Y APE R D++S G ++ E+ + K
Sbjct: 186 VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 432 LIGKGGFGTIYKS-RIGDGMEVAVKVFHLQCGRAFKSFDI--------ECEIMKSIH--Y 480
L+G GGFG++Y R+ D + VA+K H++ R ++ E ++K + +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 71
Query: 481 RNLVKIISSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH 539
+++++ + L+LE P L + + + R VLE +
Sbjct: 72 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVR 127
Query: 540 FNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEY 598
V+H D+K N+L+D + L DFG LL + T T Y PE+
Sbjct: 128 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 183
Query: 599 GREGRVFA-NGDVYSFGIMLMEI 620
R R + V+S GI+L ++
Sbjct: 184 IRYHRYHGRSAAVWSLGILLYDM 206
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 460 QCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN----EEFKE--LVLEHMPHGSLEKCLY 513
RA++ E +MK ++++N++ +++ + EEF++ LV+E M +L + +
Sbjct: 59 HAKRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQ 113
Query: 514 SSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITK 573
LD + ++ + +++LH +IH DLKPSN+++ + DFG+ +
Sbjct: 114 ME---LDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
Query: 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
S T + T Y APE N D++S G ++ E+
Sbjct: 168 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 211
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 460 QCGRAFKSFDIECEIMKSIHYRNLVKIIS----SCSNEEFKE--LVLEHMPHGSLEKCLY 513
RA++ E +MK ++++N++ +++ + EEF++ LV+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQ 120
Query: 514 SSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITK 573
LD + ++ + +++LH +IH DLKPSN+++ + DFG+ +
Sbjct: 121 ME---LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
S T + T Y APE N D++S G ++ E+
Sbjct: 175 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG +++ + G + AVK L+ R + + C + S +V + +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL--VACAGLSSP---RIVPLYGAVR 120
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
+ + +E + GSL + + C+ + + L + LEYLH ++H D+
Sbjct: 121 EGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLGQALEGLEYLHTRR---ILHGDV 176
Query: 552 KPSNVLL-DDTMVAHLSDFGITKLLI--GEDQS-MTQTQTLATIGYIAPEYGREGRVFAN 607
K NVLL D A L DFG L G +S +T T ++APE A
Sbjct: 177 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 236
Query: 608 GDVYSFGIMLMEI 620
D++S M++ +
Sbjct: 237 VDIWSSCCMMLHM 249
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 131 NVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIF- 189
+V GIP T+ ++L N++ P L LQ + NKL IP +F
Sbjct: 26 SVPAGIP------TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFD 78
Query: 190 RLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND 227
+L +L +LDL N L F NL SL + L YN+
Sbjct: 79 KLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL-YNN 115
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 526 NIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDT---MVAHLSDFGITKLLIGEDQSM 582
IM + ++YLH + + H D+KP N+L + L+DFG K +
Sbjct: 119 EIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 172
Query: 583 TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIML 617
+ T+ T Y+APE + + D++S G+++
Sbjct: 173 SLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA 589
++ S L+YLH V++ DLK N++LD ++DFG+ K I + +M
Sbjct: 256 EIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KTFCG 311
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
T Y+APE + D + G+++ E+
Sbjct: 312 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 342
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA 589
++ S L+YLH V++ DLK N++LD ++DFG+ K I + +M
Sbjct: 259 EIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KTFCG 314
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
T Y+APE + D + G+++ E+
Sbjct: 315 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 345
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG +++ + G + AVK L+ R + + C + S +V + +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL--VACAGLSSP---RIVPLYGAVR 136
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
+ + +E + GSL + + C+ + + L + LEYLH ++H D+
Sbjct: 137 EGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLGQALEGLEYLHTRR---ILHGDV 192
Query: 552 KPSNVLL-DDTMVAHLSDFGITKLLI--GEDQS-MTQTQTLATIGYIAPEYGREGRVFAN 607
K NVLL D A L DFG L G +S +T T ++APE A
Sbjct: 193 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 252
Query: 608 GDVYSFGIMLMEI 620
D++S M++ +
Sbjct: 253 VDIWSSCCMMLHM 265
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 460 QCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN----EEFKE--LVLEHMPHGSLEKCLY 513
RA++ E +MK ++++N++ +++ + EEF++ LV+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQ 120
Query: 514 SSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITK 573
LD + ++ + +++LH +IH DLKPSN+++ + DFG+ +
Sbjct: 121 ME---LDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
S T + T Y APE N D++S G ++ E+
Sbjct: 175 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 73/195 (37%), Gaps = 40/195 (20%)
Query: 88 SSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLT 147
+ S + L +S N L I P + + L I D V G+ L N+
Sbjct: 96 KAFSPLRKLQKLYISKNHLVEIPPNLPSSLVE--LRIHDNRIRKVPKGV---FSGLRNMN 150
Query: 148 AIYLGGNKLNGS----------------------------IPFTLRELQKLQYVGLKDNK 179
I +GGN L S +P TL EL L NK
Sbjct: 151 CIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELH------LDHNK 204
Query: 180 LEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEIGNLK 238
++ D+ R KLY+L LG N++ S L +LR L L N +P + +LK
Sbjct: 205 IQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLK 264
Query: 239 VLIGIDFSMNNFSSV 253
+L + NN + V
Sbjct: 265 LLQVVYLHTNNITKV 279
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 14/193 (7%)
Query: 433 IGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS 491
+G+G FG +++ + G + AVK L+ R + + C + S +V + +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL--VACAGLSSP---RIVPLYGAVR 134
Query: 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDL 551
+ + +E + GSL + + C+ + + L + LEYLH ++H D+
Sbjct: 135 EGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLGQALEGLEYLHTRR---ILHGDV 190
Query: 552 KPSNVLL-DDTMVAHLSDFGITKLLI--GEDQS-MTQTQTLATIGYIAPEYGREGRVFAN 607
K NVLL D A L DFG L G +S +T T ++APE A
Sbjct: 191 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 250
Query: 608 GDVYSFGIMLMEI 620
D++S M++ +
Sbjct: 251 VDIWSSCCMMLHM 263
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 123 EIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEG 182
+ D+ K + +E + +L + L N ++ P L L+ +GL+ N+L+
Sbjct: 35 RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK- 93
Query: 183 TIPYDIFR-LVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND 227
IP +F L L KLD+ NK+ + F +L +L++L + ND
Sbjct: 94 LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDND 139
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 86/206 (41%), Gaps = 31/206 (15%)
Query: 51 DVSTLKDLALQDN---YLSGSLSSIADNYLTSSTPELSFLSS-----LSNCKSLVVFLLS 102
D+ LK L + DN Y+S S N L T E L+S LS+ L+V L
Sbjct: 126 DLYNLKSLEVGDNDLVYISHRAFS-GLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLR 184
Query: 103 NNPLNGI-------LPRMSIGNLSH---------------SLEIFDMSKCNVSGGIPEEI 140
+ +N I L R+ + +SH +L ++ CN++ +
Sbjct: 185 HLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAV 244
Query: 141 GNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLG 200
+L L + L N ++ L EL +LQ + L +L PY L L L++
Sbjct: 245 RHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVS 304
Query: 201 GNKLSGSILTCFSNLASLRTLSLSYN 226
GN+L+ + F ++ +L TL L N
Sbjct: 305 GNQLTTLEESVFHSVGNLETLILDSN 330
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 4/153 (2%)
Query: 122 LEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPF-TLRELQKLQYVGLKDNKL 180
LE ++++ VS P NL NL + L N+L IP L L + + +NK+
Sbjct: 58 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKI 116
Query: 181 EGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSY-NDGPLPLE-IGNLK 238
+ Y L L L++G N L FS L SL L+L N +P E + +L
Sbjct: 117 VILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLH 176
Query: 239 VLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGY 271
LI + N +++ + L L+ L + +
Sbjct: 177 GLIVLRLRHLNINAIRDYSFKRLYRLKVLEISH 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA 589
++ S L+YLH V++ DLK N++LD ++DFG+ K I + +M
Sbjct: 116 EIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KXFCG 171
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
T Y+APE + D + G+++ E+
Sbjct: 172 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 202
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 30/198 (15%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIM--KSIHYRNLVKIISSC 490
IG G FG R E+ V V +++ G +++ EI+ +S+ + N+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNEL-VAVKYIERGEKIDE-NVKREIINHRSLRHPNIVRFKEVI 84
Query: 491 SNEEFKELVLEHMPHGSLEKCL-----YSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+V+E+ G L + + +S + FQ+L S + Y H +
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCH---AMQ 135
Query: 546 VIHCDLKPSNVLLDDTMVAHLS--DFGITKLLIGEDQSMTQTQTLATIGYIAPEY----G 599
V H DLK N LLD + L FG +K + Q + T+ T YIAPE
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKS---TVGTPAYIAPEVLLKKE 192
Query: 600 REGRVFANGDVYSFGIML 617
+G+V DV+S G+ L
Sbjct: 193 YDGKV---ADVWSCGVTL 207
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 530 DVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLA 589
++ S L+YLH V++ DLK N++LD ++DFG+ K I + +M
Sbjct: 117 EIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KXFCG 172
Query: 590 TIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
T Y+APE + D + G+++ E+
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 203
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 460 QCGRAFKSFDIECEIMKSIHYRNLVKIIS----SCSNEEFKE--LVLEHMPHGSLEKCLY 513
RA++ E +MK ++++N++ +++ S EEF++ +V+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQ 120
Query: 514 SSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITK 573
LD + ++ + +++LH +IH DLKPSN+++ + DFG+ +
Sbjct: 121 ME---LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
S T + T Y APE N D++S G ++ E+
Sbjct: 175 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 460 QCGRAFKSFDIECEIMKSIHYRNLVKIIS----SCSNEEFKE--LVLEHMPHGSLEKCLY 513
RA++ E +MK ++++N++ +++ S EEF++ +V+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI- 119
Query: 514 SSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITK 573
LD + ++ + +++LH +IH DLKPSN+++ + DFG+ +
Sbjct: 120 --QMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
S T + T Y APE N D++S G ++ E+
Sbjct: 175 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 460 QCGRAFKSFDIECEIMKSIHYRNLVKIIS----SCSNEEFKE--LVLEHMPHGSLEKCLY 513
RA++ E +MK ++++N++ +++ S EEF++ +V+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI- 119
Query: 514 SSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITK 573
LD + ++ + +++LH +IH DLKPSN+++ + DFG+ +
Sbjct: 120 --QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEI 620
S T + T Y APE N D++S G ++ E+
Sbjct: 175 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 526 NIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM---VAHLSDFGITKLLIGEDQSM 582
IM + ++YLH + + H D+KP N+L + L+DFG K +
Sbjct: 165 EIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 218
Query: 583 TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIML 617
+ T T Y+APE + + D++S G+++
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 30/198 (15%)
Query: 433 IGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIM--KSIHYRNLVKIISSC 490
IG G FG R E+ V V +++ G +++ EI+ +S+ + N+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNEL-VAVKYIERGEKIDE-NVKREIINHRSLRHPNIVRFKEVI 84
Query: 491 SNEEFKELVLEHMPHGSLEKCL-----YSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+V+E+ G L + + +S + FQ+L S + Y H +
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCH---AMQ 135
Query: 546 VIHCDLKPSNVLLDDTMVAHLS--DFGITKLLIGEDQSMTQTQTLATIGYIAPEY----G 599
V H DLK N LLD + L FG +K + Q T+ T YIAPE
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP---KDTVGTPAYIAPEVLLKKE 192
Query: 600 REGRVFANGDVYSFGIML 617
+G+V DV+S G+ L
Sbjct: 193 YDGKV---ADVWSCGVTL 207
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 143 LTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIF-RLVKLYKLDLGG 201
LTNL + L N+L +L L Y+ L N+L+ ++P +F +L L +LDL
Sbjct: 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQ-SLPKGVFDKLTNLTRLDLDN 166
Query: 202 NKLSGSILTCFSNLASLRTLSLSYN 226
N+L F L L+ LSL+ N
Sbjct: 167 NQLQSLPEGVFDKLTQLKQLSLNDN 191
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Query: 76 YLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGG 135
YL +L +S+L +L +L+ N L LP L++ E+ + N
Sbjct: 67 YLALGGNKLHDISALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVE--NQLQS 123
Query: 136 IPEEI-GNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIF-RLVK 193
+P+ + LTNLT +YL N+L +L L + L +N+L+ ++P +F +L +
Sbjct: 124 LPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQ-SLPEGVFDKLTQ 182
Query: 194 LYKLDLGGNKLSGSILTCFSNLASLRTLSLSYN 226
L +L L N+L F L SL + L N
Sbjct: 183 LKQLSLNDNQLKSVPDGVFDRLTSLTHIWLLNN 215
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 78/172 (45%), Gaps = 10/172 (5%)
Query: 431 NLIGKGGFGTIYKSRIGD-GMEVAVKVFH----LQCGRAFKSFDIECEIMKSIHYRNLVK 485
+IG+G F + ++ G A+K+ + L+ G F E +++ + R + +
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEV-SCFREERDVLVNGDRRWITQ 125
Query: 486 IISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP 545
+ + +E + LV+E+ G L L + + ++ ++ +H +
Sbjct: 126 LHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLG 182
Query: 546 VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPE 597
+H D+KP N+LLD L+DFG + L + D ++ + T Y++PE
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADFG-SCLKLRADGTVRSLVAVGTPDYLSPE 233
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 526 NIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM---VAHLSDFGITKLLIGEDQSM 582
IM + ++YLH + + H D+KP N+L + L+DFG K +
Sbjct: 121 EIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 174
Query: 583 TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIML 617
+ T T Y+APE + + D++S G+++
Sbjct: 175 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 526 NIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDT---MVAHLSDFGITKLLIGEDQSM 582
IM + ++YLH + + H D+KP N+L + L+DFG K +
Sbjct: 125 EIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 178
Query: 583 TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIML 617
+ T T Y+APE + + D++S G+++
Sbjct: 179 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 213
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 526 NIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM---VAHLSDFGITKLLIGEDQSM 582
IM + ++YLH + + H D+KP N+L + L+DFG K +
Sbjct: 171 EIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 224
Query: 583 TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIML 617
+ T T Y+APE + + D++S G+++
Sbjct: 225 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 259
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,755,211
Number of Sequences: 62578
Number of extensions: 713873
Number of successful extensions: 3807
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 465
Number of HSP's that attempted gapping in prelim test: 1869
Number of HSP's gapped (non-prelim): 1369
length of query: 652
length of database: 14,973,337
effective HSP length: 105
effective length of query: 547
effective length of database: 8,402,647
effective search space: 4596247909
effective search space used: 4596247909
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)