Query 041689
Match_columns 652
No_of_seqs 791 out of 4536
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 16:27:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041689.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041689hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.8E-54 2E-58 432.6 17.3 224 425-652 32-282 (311)
2 4fih_A Serine/threonine-protei 100.0 1.5E-53 5E-58 436.2 17.7 221 425-652 74-321 (346)
3 4b9d_A Serine/threonine-protei 100.0 8.8E-54 3E-58 438.6 14.8 223 425-652 24-274 (350)
4 4asz_A BDNF/NT-3 growth factor 100.0 5.9E-54 2E-58 434.0 12.8 225 425-652 13-280 (299)
5 4aoj_A High affinity nerve gro 100.0 4.4E-53 1.5E-57 433.6 15.9 225 425-652 41-310 (329)
6 3omv_A RAF proto-oncogene seri 100.0 9.3E-53 3.2E-57 425.1 16.4 224 423-652 34-291 (307)
7 4gt4_A Tyrosine-protein kinase 100.0 6.9E-53 2.4E-57 428.0 15.0 224 426-652 27-297 (308)
8 4fie_A Serine/threonine-protei 100.0 2.2E-52 7.5E-57 438.0 18.5 221 425-652 151-398 (423)
9 3hyh_A Carbon catabolite-derep 100.0 3.9E-52 1.3E-56 413.8 17.0 220 425-652 13-260 (275)
10 3fpq_A Serine/threonine-protei 100.0 6.4E-52 2.2E-56 415.9 17.6 216 428-652 29-280 (290)
11 4g3f_A NF-kappa-beta-inducing 100.0 3.4E-52 1.2E-56 424.9 15.1 220 424-652 57-307 (336)
12 3ubd_A Ribosomal protein S6 ki 100.0 3.6E-52 1.2E-56 419.7 12.4 220 425-650 24-272 (304)
13 4ase_A Vascular endothelial gr 100.0 1.5E-50 5.1E-55 418.1 14.3 236 414-652 53-338 (353)
14 4g31_A Eukaryotic translation 100.0 5.8E-50 2E-54 405.5 15.8 222 425-652 5-277 (299)
15 3hmm_A TGF-beta receptor type- 100.0 7.8E-50 2.7E-54 406.6 14.8 224 425-652 3-288 (303)
16 4b99_A Mitogen-activated prote 100.0 6.4E-48 2.2E-52 405.4 17.2 223 425-652 54-342 (398)
17 4f9c_A Cell division cycle 7-r 100.0 1.8E-47 6.3E-52 397.7 16.3 199 420-627 16-247 (361)
18 3uto_A Twitchin; kinase, muscl 100.0 1.6E-46 5.6E-51 414.1 18.6 222 425-652 157-408 (573)
19 3v5w_A G-protein coupled recep 100.0 1.5E-46 5.3E-51 410.8 17.5 217 425-649 189-439 (689)
20 3rgz_A Protein brassinosteroid 100.0 4.2E-45 1.4E-49 420.5 26.5 352 4-362 318-753 (768)
21 3fxz_A Serine/threonine-protei 100.0 9.4E-44 3.2E-48 362.6 20.0 222 424-652 19-267 (297)
22 3fe3_A MAP/microtubule affinit 100.0 1.8E-43 6.3E-48 364.9 17.7 223 423-652 13-262 (328)
23 3uim_A Brassinosteroid insensi 100.0 1.2E-43 4.1E-48 367.1 15.8 242 410-652 15-302 (326)
24 2qkw_B Protein kinase; three-h 100.0 1.1E-43 3.8E-48 366.4 14.2 236 414-652 28-306 (321)
25 3zgw_A Maternal embryonic leuc 100.0 2.2E-43 7.4E-48 366.5 16.3 224 424-652 9-258 (347)
26 3s95_A LIMK-1, LIM domain kina 100.0 6.5E-43 2.2E-47 358.9 19.0 226 424-652 9-273 (310)
27 2c30_A Serine/threonine-protei 100.0 1E-42 3.5E-47 358.9 19.8 233 413-652 23-292 (321)
28 1tki_A Titin; serine kinase, m 100.0 1.1E-42 3.8E-47 358.4 18.4 222 424-652 4-255 (321)
29 2yab_A Death-associated protei 100.0 1.7E-42 5.9E-47 361.9 19.2 222 424-652 11-270 (361)
30 3niz_A Rhodanese family protei 100.0 1.2E-42 4E-47 356.9 17.6 223 424-652 20-298 (311)
31 1o6l_A RAC-beta serine/threoni 100.0 1.4E-42 4.8E-47 359.3 18.3 218 424-647 4-248 (337)
32 2psq_A Fibroblast growth facto 100.0 1.2E-42 4.1E-47 365.4 17.6 226 424-652 80-355 (370)
33 3txo_A PKC-L, NPKC-ETA, protei 100.0 8.4E-43 2.9E-47 363.4 16.0 221 423-649 21-269 (353)
34 3tki_A Serine/threonine-protei 100.0 8.4E-43 2.9E-47 359.8 15.8 225 424-652 6-259 (323)
35 1xjd_A Protein kinase C, theta 100.0 2.3E-42 7.9E-47 358.7 18.8 226 421-652 13-267 (345)
36 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.7E-42 5.6E-47 358.4 17.0 221 424-652 8-256 (336)
37 3rgz_A Protein brassinosteroid 100.0 9E-42 3.1E-46 392.8 24.7 343 4-350 269-721 (768)
38 4aw2_A Serine/threonine-protei 100.0 3.2E-43 1.1E-47 375.6 11.5 232 417-652 66-336 (437)
39 3p86_A Serine/threonine-protei 100.0 1.7E-42 5.9E-47 355.1 16.1 227 420-652 32-289 (309)
40 4dc2_A Protein kinase C IOTA t 100.0 3.6E-42 1.2E-46 362.8 18.6 220 424-649 51-307 (396)
41 2y0a_A Death-associated protei 100.0 4.8E-42 1.6E-46 354.7 18.6 221 425-652 11-269 (326)
42 3soc_A Activin receptor type-2 100.0 8.3E-43 2.9E-47 359.9 12.6 225 424-652 23-309 (322)
43 2bdw_A Hypothetical protein K1 100.0 4.5E-42 1.5E-46 359.7 18.1 222 424-652 28-282 (362)
44 1ob3_A PFPK5, cell division co 100.0 1.7E-42 5.9E-47 351.8 14.5 222 425-652 2-278 (288)
45 3kul_A Ephrin type-A receptor 100.0 2.8E-42 9.6E-47 356.3 16.1 226 424-652 48-304 (325)
46 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.5E-42 1.2E-46 345.6 16.3 224 424-652 7-255 (268)
47 4hcu_A Tyrosine-protein kinase 100.0 1.8E-42 6.1E-47 348.0 14.1 224 424-652 9-257 (269)
48 1kob_A Twitchin; kinase, intra 100.0 7.5E-42 2.6E-46 360.3 19.5 223 424-652 50-302 (387)
49 3soa_A Calcium/calmodulin-depe 100.0 4.2E-42 1.4E-46 368.4 17.7 224 423-652 9-265 (444)
50 4fr4_A YANK1, serine/threonine 100.0 6.4E-42 2.2E-46 359.7 18.7 217 425-648 15-264 (384)
51 3o0g_A Cell division protein k 100.0 6.1E-42 2.1E-46 348.5 17.9 222 425-652 2-280 (292)
52 3cbl_A C-FES, proto-oncogene t 100.0 9.6E-43 3.3E-47 367.4 12.1 227 423-652 112-365 (377)
53 4eqm_A Protein kinase; transfe 100.0 5.6E-42 1.9E-46 348.9 17.0 222 424-650 10-264 (294)
54 3a8x_A Protein kinase C IOTA t 100.0 1E-41 3.5E-46 354.4 19.1 219 425-649 9-264 (345)
55 3c0i_A Peripheral plasma membr 100.0 3.8E-42 1.3E-46 359.1 15.9 223 425-652 24-284 (351)
56 1fot_A TPK1 delta, CAMP-depend 100.0 9.4E-42 3.2E-46 350.5 18.1 215 424-647 5-246 (318)
57 2id5_A Lingo-1, leucine rich r 100.0 7.4E-41 2.5E-45 364.8 26.3 313 17-349 21-336 (477)
58 2pmi_A Negative RE, cyclin-dep 100.0 8.2E-42 2.8E-46 351.7 17.4 224 423-652 3-291 (317)
59 2zv2_A Calcium/calmodulin-depe 100.0 8.5E-42 2.9E-46 348.5 17.3 222 424-652 12-290 (298)
60 3v8s_A RHO-associated protein 100.0 3.4E-42 1.2E-46 365.0 14.9 229 418-652 62-327 (410)
61 3v47_A TOLL-like receptor 5B a 100.0 6E-41 2.1E-45 363.3 24.3 310 21-350 24-412 (455)
62 3ugc_A Tyrosine-protein kinase 100.0 3.1E-42 1.1E-46 351.2 12.9 226 424-652 9-282 (295)
63 3qd2_B Eukaryotic translation 100.0 1.1E-41 3.9E-46 352.9 17.2 226 424-652 5-323 (332)
64 2vd5_A DMPK protein; serine/th 100.0 7.1E-42 2.4E-46 362.8 16.0 232 416-652 52-325 (412)
65 2nru_A Interleukin-1 receptor- 100.0 3.6E-41 1.2E-45 345.3 20.6 237 411-652 11-297 (307)
66 3vhe_A Vascular endothelial gr 100.0 2.8E-42 9.5E-47 361.8 12.5 238 412-652 9-346 (359)
67 2i0e_A Protein kinase C-beta I 100.0 1.9E-41 6.6E-46 352.9 18.4 221 423-649 18-266 (353)
68 2id5_A Lingo-1, leucine rich r 100.0 6.3E-41 2.2E-45 365.4 22.9 329 2-351 30-361 (477)
69 3kn6_A Ribosomal protein S6 ki 100.0 2.4E-41 8.1E-46 349.2 18.3 214 430-652 16-268 (325)
70 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.5E-41 5.2E-46 353.7 17.0 215 425-648 41-282 (350)
71 3gen_A Tyrosine-protein kinase 100.0 7.2E-42 2.5E-46 346.3 14.1 225 423-652 22-271 (283)
72 2x4f_A Myosin light chain kina 100.0 1.3E-41 4.5E-46 357.5 16.6 220 427-652 91-340 (373)
73 3lb7_A RAF proto-oncogene seri 100.0 1.6E-41 5.4E-46 347.7 16.7 223 424-652 35-291 (307)
74 4euu_A Serine/threonine-protei 100.0 2.1E-41 7.1E-46 349.1 17.4 223 424-652 8-300 (319)
75 2qol_A Ephrin receptor; recept 100.0 8E-42 2.8E-46 359.3 14.4 225 425-652 45-300 (373)
76 3a62_A Ribosomal protein S6 ki 100.0 1.5E-41 5E-46 351.2 16.0 220 424-649 16-266 (327)
77 3l9p_A Anaplastic lymphoma kin 100.0 3.5E-42 1.2E-46 361.6 11.4 225 425-652 71-336 (367)
78 2izr_A Casein kinase I isoform 100.0 1.7E-41 5.7E-46 351.5 16.2 223 424-652 8-272 (330)
79 3tt0_A Basic fibroblast growth 100.0 2.1E-41 7.3E-46 357.8 17.0 226 424-652 68-343 (382)
80 3gni_B Strad alpha; kinase fol 100.0 3.1E-41 1.1E-45 357.8 18.1 203 423-628 23-238 (389)
81 3llt_A Serine/threonine kinase 100.0 1.6E-41 5.6E-46 356.1 15.8 209 410-628 20-260 (360)
82 3dls_A PAS domain-containing s 100.0 1.5E-41 5.2E-46 352.1 14.7 223 423-652 22-272 (335)
83 2y94_A 5'-AMP-activated protei 100.0 2.8E-41 9.5E-46 364.3 17.2 221 425-652 16-264 (476)
84 2r5t_A Serine/threonine-protei 100.0 2.1E-41 7.3E-46 355.1 15.8 221 424-650 37-285 (373)
85 3cok_A Serine/threonine-protei 100.0 4.1E-41 1.4E-45 339.8 17.3 224 424-652 10-260 (278)
86 2w4o_A Calcium/calmodulin-depe 100.0 2.3E-41 7.9E-46 352.8 16.0 220 424-652 52-303 (349)
87 1rjb_A FL cytokine receptor; k 100.0 1.7E-41 6E-46 353.6 15.0 227 423-652 43-325 (344)
88 1luf_A Muscle-specific tyrosin 100.0 1.2E-41 4.2E-46 354.5 13.9 230 420-652 42-326 (343)
89 3p1a_A MYT1 kinase, membrane-a 100.0 3.2E-41 1.1E-45 346.3 16.7 220 425-652 57-302 (311)
90 3poz_A Epidermal growth factor 100.0 1.3E-41 4.3E-46 351.8 13.7 225 424-652 14-269 (327)
91 3kk8_A Calcium/calmodulin depe 100.0 6.5E-41 2.2E-45 339.4 18.7 222 424-652 5-259 (284)
92 3dbq_A Dual specificity protei 100.0 1.5E-41 5.1E-46 353.8 14.3 223 424-652 8-271 (343)
93 2eue_A Carbon catabolite derep 100.0 3.9E-41 1.3E-45 339.4 16.6 220 425-652 13-260 (275)
94 3uc3_A Serine/threonine-protei 100.0 2.1E-41 7.2E-46 354.6 15.2 222 423-652 18-272 (361)
95 3oz6_A Mitogen-activated prote 100.0 4.5E-41 1.5E-45 356.3 17.7 224 423-652 7-326 (388)
96 3f3z_A Calcium/calmodulin-depe 100.0 6.4E-41 2.2E-45 338.2 17.9 221 424-652 8-259 (277)
97 2ivs_A Proto-oncogene tyrosine 100.0 2.4E-41 8.2E-46 347.7 15.1 226 424-652 22-302 (314)
98 1csn_A Casein kinase-1; phosph 100.0 6.5E-41 2.2E-45 341.8 17.8 223 424-652 9-274 (298)
99 3mtl_A Cell division protein k 100.0 1.5E-41 5E-46 350.9 12.8 222 425-652 2-279 (324)
100 3kex_A Receptor tyrosine-prote 100.0 1.4E-41 4.7E-46 351.3 12.4 224 425-652 13-267 (325)
101 3fdn_A Serine/threonine-protei 100.0 4.3E-41 1.5E-45 339.8 15.5 221 424-652 8-255 (279)
102 4fvq_A Tyrosine-protein kinase 100.0 1.6E-41 5.5E-46 344.7 12.4 220 424-652 7-266 (289)
103 2a2a_A Death-associated protei 100.0 7.8E-41 2.7E-45 345.1 17.7 221 425-652 12-270 (321)
104 3q4u_A Activin receptor type-1 100.0 4.8E-41 1.6E-45 343.3 15.9 220 424-652 7-293 (301)
105 3qup_A Tyrosine-protein kinase 100.0 2.2E-41 7.4E-46 349.6 13.4 228 422-652 20-289 (323)
106 1t46_A HOMO sapiens V-KIT hard 100.0 3.1E-41 1.1E-45 346.8 14.4 226 424-652 22-298 (313)
107 3v47_A TOLL-like receptor 5B a 100.0 3.8E-40 1.3E-44 357.0 23.6 308 2-329 28-414 (455)
108 1u5q_A Serine/threonine protei 100.0 4.6E-41 1.6E-45 350.1 15.6 218 425-652 54-303 (348)
109 4agu_A Cyclin-dependent kinase 100.0 6.3E-41 2.2E-45 344.2 16.5 222 425-652 3-282 (311)
110 3g33_A Cell division protein k 100.0 8.3E-41 2.8E-45 342.8 17.0 223 423-652 7-294 (308)
111 3t9t_A Tyrosine-protein kinase 100.0 3.2E-41 1.1E-45 338.3 13.7 224 424-652 7-255 (267)
112 3ork_A Serine/threonine protei 100.0 1.8E-41 6E-46 348.3 11.9 224 424-651 11-270 (311)
113 2ac3_A MAP kinase-interacting 100.0 6.5E-41 2.2E-45 344.9 16.1 224 425-652 12-293 (316)
114 2zmd_A Dual specificity protei 100.0 4.7E-41 1.6E-45 355.7 15.4 222 425-652 56-318 (390)
115 2qr7_A Ribosomal protein S6 ki 100.0 2.5E-41 8.5E-46 351.1 12.7 220 423-652 20-275 (342)
116 2rku_A Serine/threonine-protei 100.0 2.5E-40 8.6E-45 336.9 19.7 223 424-652 14-263 (294)
117 3dtc_A Mitogen-activated prote 100.0 6.2E-41 2.1E-45 337.1 14.9 222 424-652 6-264 (271)
118 4aaa_A Cyclin-dependent kinase 100.0 1.1E-40 3.8E-45 345.5 17.2 222 425-652 25-304 (331)
119 3ttj_A Mitogen-activated prote 100.0 5.7E-41 2E-45 362.5 15.6 219 424-652 61-353 (464)
120 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.3E-40 7.7E-45 361.2 20.4 221 425-650 185-439 (543)
121 2acx_A G protein-coupled recep 100.0 1.1E-40 3.6E-45 364.5 17.8 219 424-648 183-433 (576)
122 2yex_A Serine/threonine-protei 100.0 1.2E-40 4.1E-45 335.8 16.8 225 424-652 6-259 (276)
123 2pvf_A Fibroblast growth facto 100.0 9.2E-41 3.1E-45 346.6 16.3 226 424-652 34-309 (334)
124 4e5w_A Tyrosine-protein kinase 100.0 6.3E-41 2.2E-45 342.6 14.8 225 425-652 21-293 (302)
125 4f0f_A Serine/threonine-protei 100.0 1.7E-40 5.9E-45 336.8 17.7 219 424-652 18-280 (287)
126 3hko_A Calcium/calmodulin-depe 100.0 8.6E-41 3E-45 348.4 15.8 230 420-652 21-328 (345)
127 3lxl_A Tyrosine-protein kinase 100.0 5.4E-41 1.8E-45 347.3 14.0 225 425-652 23-294 (327)
128 2xir_A Vascular endothelial gr 100.0 4.1E-41 1.4E-45 346.4 12.9 236 414-652 16-301 (316)
129 1nxk_A MAP kinase-activated pr 100.0 1.6E-40 5.6E-45 352.6 17.9 217 425-652 61-319 (400)
130 4ejn_A RAC-alpha serine/threon 100.0 3.1E-41 1.1E-45 364.0 12.5 223 424-652 147-402 (446)
131 3rp9_A Mitogen-activated prote 100.0 1E-40 3.5E-45 361.5 16.5 195 424-623 52-280 (458)
132 3is5_A Calcium-dependent prote 100.0 8.8E-41 3E-45 338.6 14.7 221 425-652 22-276 (285)
133 1mp8_A Focal adhesion kinase 1 100.0 5.8E-41 2E-45 339.2 13.4 224 424-652 14-267 (281)
134 2owb_A Serine/threonine-protei 100.0 3.3E-40 1.1E-44 342.4 19.2 223 424-652 40-289 (335)
135 3pg1_A Mitogen-activated prote 100.0 1.6E-40 5.6E-45 348.7 16.9 232 414-652 11-314 (362)
136 3bhy_A Death-associated protei 100.0 2.7E-40 9.3E-45 334.6 17.6 221 425-652 5-263 (283)
137 1qcf_A Haematopoetic cell kina 100.0 4.7E-41 1.6E-45 363.2 12.7 225 422-652 185-435 (454)
138 2jam_A Calcium/calmodulin-depe 100.0 1.3E-40 4.4E-45 340.7 15.2 221 424-652 8-259 (304)
139 3lzb_A Epidermal growth factor 100.0 7E-41 2.4E-45 346.1 13.1 225 424-652 14-269 (327)
140 3og7_A AKAP9-BRAF fusion prote 100.0 1E-40 3.4E-45 338.9 14.0 224 423-652 22-279 (289)
141 3mi9_A Cell division protein k 100.0 2.4E-40 8.2E-45 345.9 17.0 225 424-652 16-309 (351)
142 3vq2_A TLR4, TOLL-like recepto 100.0 2.7E-39 9.4E-44 363.3 26.8 344 2-350 30-562 (606)
143 1k9a_A Carboxyl-terminal SRC k 100.0 2E-40 6.9E-45 357.6 16.8 219 423-652 191-436 (450)
144 3gbz_A Kinase, CMGC CDK; ssgci 100.0 6.3E-41 2.1E-45 346.9 12.3 225 421-652 30-316 (329)
145 3a7i_A MST3 kinase, serine/thr 100.0 5.2E-40 1.8E-44 336.1 18.9 222 424-652 21-268 (303)
146 3op5_A Serine/threonine-protei 100.0 8.7E-41 3E-45 350.9 13.5 226 423-652 33-320 (364)
147 1p4o_A Insulin-like growth fac 100.0 2.9E-41 9.9E-46 348.5 9.7 231 419-652 19-290 (322)
148 2vgo_A Serine/threonine-protei 100.0 3.2E-40 1.1E-44 334.3 17.1 220 425-652 14-260 (284)
149 1ua2_A CAK, cell division prot 100.0 1.4E-40 4.7E-45 346.9 14.8 226 421-652 6-289 (346)
150 3eqc_A Dual specificity mitoge 100.0 6.8E-41 2.3E-45 351.3 12.6 221 425-652 33-322 (360)
151 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.1E-40 7.1E-45 348.3 15.9 221 423-649 63-326 (365)
152 3nsz_A CK II alpha, casein kin 100.0 5.5E-40 1.9E-44 340.2 18.7 216 424-652 35-317 (330)
153 1opk_A P150, C-ABL, proto-onco 100.0 1.3E-40 4.3E-45 363.3 14.5 224 424-652 219-469 (495)
154 3kmu_A ILK, integrin-linked ki 100.0 2.2E-40 7.5E-45 332.9 15.0 217 425-652 10-261 (271)
155 3n9x_A Phosphotransferase; mal 100.0 3.6E-40 1.2E-44 353.9 17.4 195 424-623 25-248 (432)
156 3com_A Serine/threonine-protei 100.0 5E-40 1.7E-44 337.9 17.6 224 422-652 26-276 (314)
157 2y7j_A Phosphorylase B kinase 100.0 5.6E-40 1.9E-44 344.5 18.2 228 418-652 87-357 (365)
158 1qpc_A LCK kinase; alpha beta 100.0 1E-40 3.5E-45 337.0 12.1 224 423-652 11-260 (279)
159 1u59_A Tyrosine-protein kinase 100.0 3.6E-40 1.2E-44 334.5 16.1 224 425-652 9-263 (287)
160 2i1m_A Macrophage colony-stimu 100.0 1.2E-40 4.1E-45 345.6 12.7 228 422-652 43-317 (333)
161 2eva_A TAK1 kinase - TAB1 chim 100.0 3.1E-40 1E-44 338.3 15.4 218 425-652 8-254 (307)
162 3j0a_A TOLL-like receptor 5; m 100.0 6.7E-39 2.3E-43 372.7 28.6 229 122-350 268-564 (844)
163 1cm8_A Phosphorylated MAP kina 100.0 3.1E-40 1.1E-44 346.6 15.7 218 424-652 24-305 (367)
164 2v62_A Serine/threonine-protei 100.0 1.2E-40 4.1E-45 347.2 12.5 224 424-652 36-319 (345)
165 1x8b_A WEE1HU, WEE1-like prote 100.0 3.7E-40 1.3E-44 334.3 15.7 221 423-652 9-277 (289)
166 3i6u_A CDS1, serine/threonine- 100.0 3.3E-40 1.1E-44 352.6 16.0 222 423-652 133-397 (419)
167 2w1i_A JAK2; chromosomal rearr 100.0 2.8E-40 9.7E-45 341.7 14.9 226 424-652 40-313 (326)
168 4hgt_A Casein kinase I isoform 100.0 5.1E-40 1.7E-44 334.8 16.5 224 423-652 7-271 (296)
169 2h6d_A 5'-AMP-activated protei 100.0 4.5E-40 1.5E-44 331.7 15.9 222 424-652 10-259 (276)
170 3cc6_A Protein tyrosine kinase 100.0 2.3E-40 7.9E-45 334.8 13.7 225 423-652 10-264 (281)
171 3byv_A Rhoptry kinase; malaria 100.0 4.6E-41 1.6E-45 354.7 8.9 219 424-652 72-357 (377)
172 2xrw_A Mitogen-activated prote 100.0 5.3E-40 1.8E-44 345.7 16.7 219 424-652 24-316 (371)
173 1t4h_A Serine/threonine-protei 100.0 8.8E-40 3E-44 332.2 17.8 218 426-652 27-280 (290)
174 3mwu_A Calmodulin-domain prote 100.0 4.2E-40 1.4E-44 359.2 16.5 221 424-652 21-274 (486)
175 2clq_A Mitogen-activated prote 100.0 9.8E-40 3.4E-44 332.6 18.0 221 427-652 24-276 (295)
176 2j7t_A Serine/threonine-protei 100.0 1.5E-40 5E-45 339.9 11.9 225 423-652 17-273 (302)
177 3f66_A Hepatocyte growth facto 100.0 3.3E-40 1.1E-44 336.7 14.5 226 424-652 24-282 (298)
178 4eut_A Serine/threonine-protei 100.0 2E-40 6.8E-45 352.0 13.3 223 424-652 8-300 (396)
179 3lxp_A Non-receptor tyrosine-p 100.0 6.1E-40 2.1E-44 337.9 16.4 221 427-652 33-301 (318)
180 2a19_B Interferon-induced, dou 100.0 3.7E-40 1.3E-44 333.7 14.6 220 423-652 9-265 (284)
181 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.9E-40 6.3E-45 358.1 13.1 224 423-652 182-431 (452)
182 3lm5_A Serine/threonine-protei 100.0 8.1E-40 2.8E-44 338.3 17.1 226 421-652 24-285 (327)
183 1mqb_A Ephrin type-A receptor 100.0 4.4E-40 1.5E-44 341.1 15.1 225 425-652 44-300 (333)
184 2buj_A Serine/threonine-protei 100.0 4.4E-40 1.5E-44 338.8 15.0 227 423-652 27-297 (317)
185 3pfq_A PKC-B, PKC-beta, protei 100.0 7.2E-40 2.4E-44 369.0 17.9 221 423-649 339-587 (674)
186 3kfa_A Tyrosine-protein kinase 100.0 3E-40 1E-44 335.2 13.3 225 423-652 11-262 (288)
187 2h34_A Serine/threonine-protei 100.0 8.9E-40 3E-44 335.2 16.9 223 424-651 33-286 (309)
188 4eco_A Uncharacterized protein 100.0 8.9E-39 3E-43 359.7 26.6 335 4-350 206-604 (636)
189 3pls_A Macrophage-stimulating 100.0 5.1E-40 1.8E-44 335.2 15.0 224 426-652 22-278 (298)
190 3lij_A Calcium/calmodulin depe 100.0 6.1E-40 2.1E-44 358.5 16.4 220 425-652 37-289 (494)
191 1vzo_A Ribosomal protein S6 ki 100.0 2.4E-40 8.2E-45 346.1 12.5 223 424-651 53-318 (355)
192 3eb0_A Putative uncharacterize 100.0 7.7E-40 2.6E-44 346.1 16.4 221 421-652 3-319 (383)
193 3kvw_A DYRK2, dual specificity 100.0 9.7E-40 3.3E-44 349.9 17.3 195 424-628 96-300 (429)
194 3q5i_A Protein kinase; CDPK, m 100.0 1.2E-39 4.1E-44 357.1 18.5 221 424-652 35-299 (504)
195 3nyv_A Calmodulin-domain prote 100.0 3.5E-40 1.2E-44 359.9 14.1 220 425-652 26-279 (484)
196 2w5a_A Serine/threonine-protei 100.0 1.8E-40 6.2E-45 335.2 10.9 224 424-652 5-265 (279)
197 2wqm_A Serine/threonine-protei 100.0 9.5E-40 3.3E-44 335.2 16.4 224 424-652 31-288 (310)
198 2yfx_A Tyrosine-protein kinase 100.0 3.5E-40 1.2E-44 341.2 13.1 226 424-652 29-295 (327)
199 3uzp_A CKI-delta, CKID, casein 100.0 1.3E-39 4.3E-44 331.9 17.0 223 424-652 8-271 (296)
200 1phk_A Phosphorylase kinase; g 100.0 1.9E-39 6.6E-44 330.9 18.3 223 423-652 15-281 (298)
201 2x7f_A TRAF2 and NCK-interacti 100.0 3.2E-40 1.1E-44 341.3 12.6 234 413-652 12-284 (326)
202 3brb_A Proto-oncogene tyrosine 100.0 5.6E-40 1.9E-44 337.5 14.3 230 420-652 29-299 (313)
203 3c1x_A Hepatocyte growth facto 100.0 2.4E-40 8.1E-45 347.8 11.7 225 425-652 89-346 (373)
204 1fvr_A Tyrosine-protein kinase 100.0 5.6E-40 1.9E-44 339.6 14.3 222 425-652 25-291 (327)
205 3g2f_A Bone morphogenetic prot 100.0 5.1E-40 1.7E-44 341.3 13.6 223 424-652 12-309 (336)
206 2r3i_A Cell division protein k 100.0 9.1E-40 3.1E-44 333.5 15.0 222 425-652 3-281 (299)
207 3qyz_A Mitogen-activated prote 100.0 1.2E-39 4.3E-44 342.1 16.4 223 424-652 26-311 (364)
208 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.7E-38 1.3E-42 350.5 29.0 158 189-349 350-513 (562)
209 1xbb_A Tyrosine-protein kinase 100.0 3.9E-40 1.3E-44 335.0 11.9 226 422-652 13-270 (291)
210 2wtk_C Serine/threonine-protei 100.0 2.7E-39 9.1E-44 331.1 18.0 225 424-652 4-261 (305)
211 2fst_X Mitogen-activated prote 100.0 6.6E-40 2.3E-44 343.8 13.6 218 424-652 28-309 (367)
212 2i6l_A Mitogen-activated prote 100.0 1.6E-39 5.3E-44 335.0 16.1 223 424-652 10-303 (320)
213 3q60_A ROP5B; pseudokinase, tr 100.0 3.3E-40 1.1E-44 347.5 11.2 220 424-652 61-350 (371)
214 2z7x_B TOLL-like receptor 1, v 100.0 2.9E-38 1E-42 348.2 27.2 327 8-349 4-484 (520)
215 3ll6_A Cyclin G-associated kin 100.0 1.5E-39 5E-44 337.8 15.7 226 423-652 26-299 (337)
216 2pml_X PFPK7, Ser/Thr protein 100.0 1.3E-39 4.3E-44 340.1 15.1 221 424-652 30-320 (348)
217 3mdy_A Bone morphogenetic prot 100.0 3.8E-39 1.3E-43 334.8 18.6 226 421-652 33-322 (337)
218 2ycf_A Serine/threonine-protei 100.0 1.3E-39 4.4E-44 336.2 14.7 221 424-652 9-272 (322)
219 2vwi_A Serine/threonine-protei 100.0 3E-40 1E-44 337.6 9.8 229 421-652 11-285 (303)
220 3rgf_A Cyclin-dependent kinase 100.0 1.2E-39 4.1E-44 347.3 14.4 220 427-652 22-331 (405)
221 3gxj_A TGF-beta receptor type- 100.0 3.5E-41 1.2E-45 344.6 2.3 219 425-652 3-288 (303)
222 2jii_A Serine/threonine-protei 100.0 5.1E-40 1.7E-44 343.5 11.1 220 424-652 41-327 (352)
223 3t6q_A CD180 antigen; protein- 100.0 3E-38 1E-42 354.8 26.3 235 89-326 273-516 (606)
224 2ozo_A Tyrosine-protein kinase 100.0 1.1E-39 3.6E-44 364.3 14.3 223 426-652 336-589 (613)
225 1wak_A Serine/threonine-protei 100.0 2.2E-39 7.5E-44 344.5 16.1 196 424-628 36-294 (397)
226 1b6c_B TGF-B superfamily recep 100.0 5.6E-39 1.9E-43 334.3 18.5 228 416-652 33-327 (342)
227 4e7w_A Glycogen synthase kinas 100.0 2.2E-39 7.4E-44 343.6 15.1 218 425-652 40-319 (394)
228 1z57_A Dual specificity protei 100.0 4.2E-39 1.4E-43 334.5 16.8 219 424-652 13-326 (339)
229 2h8h_A Proto-oncogene tyrosine 100.0 7.3E-40 2.5E-44 360.5 11.5 224 423-652 265-514 (535)
230 3cek_A Dual specificity protei 100.0 2.2E-39 7.7E-44 333.0 14.4 231 416-652 19-290 (313)
231 1blx_A Cyclin-dependent kinase 100.0 4.3E-39 1.5E-43 332.8 16.4 224 422-652 8-294 (326)
232 4exu_A Mitogen-activated prote 100.0 3.5E-39 1.2E-43 339.5 15.8 217 424-652 41-321 (371)
233 4g8a_A TOLL-like receptor 4; l 100.0 1.5E-37 5.1E-42 350.9 30.2 135 215-349 444-583 (635)
234 2z63_A TOLL-like receptor 4, v 100.0 7.8E-38 2.7E-42 348.8 27.4 344 2-350 26-535 (570)
235 1j1b_A Glycogen synthase kinas 100.0 3.3E-39 1.1E-43 345.0 15.6 217 425-652 54-334 (420)
236 3e3p_A Protein kinase, putativ 100.0 5E-39 1.7E-43 337.2 16.4 227 418-652 16-312 (360)
237 1byg_A CSK, protein (C-termina 100.0 1.1E-39 3.7E-44 329.4 10.9 218 424-652 20-264 (278)
238 3t6q_A CD180 antigen; protein- 100.0 1E-37 3.5E-42 350.5 28.2 325 2-347 31-414 (606)
239 1zy4_A Serine/threonine-protei 100.0 4.4E-39 1.5E-43 328.8 15.4 225 424-652 5-281 (303)
240 3fme_A Dual specificity mitoge 100.0 3.7E-39 1.3E-43 327.4 14.7 223 424-652 6-264 (290)
241 1u46_A ACK-1, activated CDC42 100.0 1.5E-39 5E-44 330.6 11.7 225 424-652 17-275 (291)
242 2b9h_A MAP kinase FUS3, mitoge 100.0 5.7E-39 1.9E-43 335.8 16.5 223 424-652 10-303 (353)
243 3an0_A Dual specificity mitoge 100.0 4.5E-39 1.6E-43 334.7 14.7 224 423-652 49-308 (340)
244 3a99_A Proto-oncogene serine/t 100.0 2.8E-39 9.7E-44 333.2 13.0 224 421-652 39-291 (320)
245 2vx3_A Dual specificity tyrosi 100.0 1.1E-38 3.8E-43 337.1 17.0 198 423-628 52-259 (382)
246 3o6n_A APL1; leucine-rich repe 100.0 1.4E-37 4.7E-42 329.8 25.2 309 4-349 45-355 (390)
247 3sv0_A Casein kinase I-like; t 100.0 1.7E-38 5.9E-43 343.2 18.1 223 424-652 6-269 (483)
248 2wei_A Calmodulin-domain prote 100.0 9.2E-39 3.1E-43 324.1 14.7 222 423-652 20-274 (287)
249 4fl3_A Tyrosine-protein kinase 100.0 5.1E-39 1.8E-43 359.6 14.0 217 431-652 375-622 (635)
250 1ziw_A TOLL-like receptor 3; i 100.0 2.1E-37 7.3E-42 352.7 27.4 344 4-350 222-626 (680)
251 2iwi_A Serine/threonine-protei 100.0 3.9E-39 1.3E-43 331.0 11.7 226 419-652 25-281 (312)
252 2eu9_A Dual specificity protei 100.0 1.6E-38 5.4E-43 332.5 16.3 219 424-652 18-331 (355)
253 3fhr_A MAP kinase-activated pr 100.0 1.3E-38 4.3E-43 330.5 15.0 218 424-652 27-285 (336)
254 3coi_A Mitogen-activated prote 100.0 1.4E-38 4.9E-43 332.7 15.5 217 424-652 23-303 (353)
255 3p23_A Serine/threonine-protei 100.0 1E-38 3.5E-43 341.6 12.1 223 423-652 22-281 (432)
256 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.7E-39 1.6E-43 331.5 8.9 227 420-652 28-293 (319)
257 4eco_A Uncharacterized protein 100.0 2.3E-37 7.7E-42 348.2 23.0 293 45-344 198-547 (636)
258 2j0j_A Focal adhesion kinase 1 100.0 2.3E-38 7.7E-43 355.7 14.6 225 423-652 388-642 (656)
259 4ecn_A Leucine-rich repeat pro 100.0 7.9E-37 2.7E-41 349.9 27.6 334 4-348 448-842 (876)
260 1q8y_A SR protein kinase; tran 100.0 2.4E-38 8.3E-43 333.6 13.6 196 424-628 18-236 (373)
261 2rio_A Serine/threonine-protei 100.0 2.5E-38 8.6E-43 339.6 13.6 220 426-652 16-293 (434)
262 3qa8_A MGC80376 protein; kinas 100.0 3E-38 1E-42 348.3 14.6 222 425-652 14-295 (676)
263 3oja_B Anopheles plasmodium-re 100.0 6.5E-37 2.2E-41 342.5 25.3 308 5-349 52-361 (597)
264 2z81_A CD282 antigen, TOLL-lik 100.0 5E-37 1.7E-41 340.7 23.8 339 2-349 24-513 (549)
265 4g8a_A TOLL-like receptor 4; l 100.0 5.9E-37 2E-41 346.0 24.3 165 188-352 441-612 (635)
266 2dyl_A Dual specificity mitoge 100.0 4.1E-38 1.4E-42 324.2 13.6 222 424-652 24-281 (318)
267 3aln_A Dual specificity mitoge 100.0 8.5E-38 2.9E-42 323.3 15.5 223 424-652 21-283 (327)
268 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.5E-36 1.2E-40 334.6 29.1 310 7-347 34-487 (562)
269 3vq2_A TLR4, TOLL-like recepto 100.0 2E-36 7E-41 339.9 27.2 151 8-164 15-173 (606)
270 2z7x_B TOLL-like receptor 1, v 100.0 2.1E-36 7.1E-41 333.4 23.0 315 2-327 19-485 (520)
271 1ogq_A PGIP-2, polygalacturona 100.0 9.2E-37 3.2E-41 313.0 18.8 254 94-351 50-309 (313)
272 1ziw_A TOLL-like receptor 3; i 100.0 1.2E-35 4.2E-40 338.2 29.3 321 4-328 248-627 (680)
273 2z63_A TOLL-like receptor 4, v 100.0 3.2E-36 1.1E-40 335.8 23.3 342 4-351 52-561 (570)
274 4fmz_A Internalin; leucine ric 100.0 1.7E-35 5.8E-40 308.6 26.8 301 4-345 44-345 (347)
275 1xku_A Decorin; proteoglycan, 100.0 4.1E-35 1.4E-39 303.5 28.7 287 5-321 32-330 (330)
276 4ecn_A Leucine-rich repeat pro 100.0 6.5E-36 2.2E-40 342.3 24.1 330 5-344 324-787 (876)
277 2ft3_A Biglycan; proteoglycan, 100.0 2.1E-35 7E-40 306.0 25.3 286 5-321 34-331 (332)
278 3j0a_A TOLL-like receptor 5; m 100.0 1.5E-35 5.2E-40 344.5 26.7 321 2-346 22-394 (844)
279 2pzi_A Probable serine/threoni 100.0 5.1E-37 1.7E-41 348.1 13.8 213 425-651 80-317 (681)
280 3m2w_A MAP kinase-activated pr 100.0 4.6E-36 1.6E-40 306.1 16.4 196 425-652 17-254 (299)
281 2z81_A CD282 antigen, TOLL-lik 100.0 3.9E-35 1.3E-39 325.5 23.8 156 10-188 11-168 (549)
282 1o6v_A Internalin A; bacterial 100.0 1.3E-34 4.5E-39 314.2 26.4 322 5-349 47-391 (466)
283 3dzo_A Rhoptry kinase domain; 100.0 1.6E-36 5.6E-41 323.3 10.2 218 424-651 77-360 (413)
284 1ogq_A PGIP-2, polygalacturona 100.0 2.9E-35 1E-39 301.8 18.8 249 29-321 50-302 (313)
285 3uqc_A Probable conserved tran 100.0 6.9E-36 2.4E-40 302.3 13.5 192 425-652 31-256 (286)
286 2vuw_A Serine/threonine-protei 100.0 1.1E-36 3.6E-41 316.3 6.0 192 424-629 19-279 (336)
287 2ft3_A Biglycan; proteoglycan, 100.0 5.1E-34 1.7E-38 295.5 24.8 296 19-344 16-331 (332)
288 1o6v_A Internalin A; bacterial 100.0 6.9E-34 2.3E-38 308.6 26.8 297 27-347 44-345 (466)
289 3o6n_A APL1; leucine-rich repe 100.0 1.9E-34 6.4E-39 305.7 21.8 293 23-347 39-332 (390)
290 4fmz_A Internalin; leucine ric 100.0 7.5E-34 2.6E-38 296.2 24.8 281 4-323 66-346 (347)
291 1xku_A Decorin; proteoglycan, 100.0 1.7E-33 5.7E-38 291.4 26.3 287 29-344 31-330 (330)
292 3oja_B Anopheles plasmodium-re 100.0 7.1E-34 2.4E-38 317.9 22.2 294 23-348 45-339 (597)
293 3bz5_A Internalin-J, INLJ; leu 100.0 7.4E-33 2.5E-37 298.4 27.8 295 4-346 42-352 (457)
294 2z80_A TOLL-like receptor 2, v 100.0 5.1E-33 1.7E-37 290.6 16.1 279 28-328 30-319 (353)
295 3bz5_A Internalin-J, INLJ; leu 100.0 1.9E-31 6.6E-36 287.4 26.6 287 4-345 64-367 (457)
296 2z80_A TOLL-like receptor 2, v 100.0 1.6E-32 5.5E-37 286.7 17.1 272 9-303 36-318 (353)
297 3zyi_A Leucine-rich repeat-con 100.0 1.4E-31 4.7E-36 289.3 25.0 252 54-327 55-307 (452)
298 3zyj_A Leucine-rich repeat-con 100.0 1.9E-31 6.5E-36 287.2 25.2 231 95-327 65-296 (440)
299 2z66_A Variable lymphocyte rec 100.0 2.4E-32 8.3E-37 279.5 17.0 273 56-351 10-292 (306)
300 2z66_A Variable lymphocyte rec 100.0 7E-32 2.4E-36 276.1 20.0 278 7-328 10-292 (306)
301 1ozn_A Reticulon 4 receptor; N 100.0 8.1E-32 2.8E-36 272.7 17.3 251 96-351 13-266 (285)
302 1jl5_A Outer protein YOPM; leu 100.0 1.2E-30 4.2E-35 280.8 27.0 280 29-348 131-431 (454)
303 1jl5_A Outer protein YOPM; leu 100.0 2.3E-30 7.8E-35 278.7 28.1 296 5-347 72-371 (454)
304 3zyj_A Leucine-rich repeat-con 100.0 7.1E-31 2.4E-35 282.7 23.9 245 31-299 45-292 (440)
305 3zyi_A Leucine-rich repeat-con 100.0 8.5E-31 2.9E-35 283.1 24.0 207 90-300 95-304 (452)
306 1ozn_A Reticulon 4 receptor; N 100.0 1.1E-30 3.9E-35 264.2 20.2 184 90-275 52-238 (285)
307 3o53_A Protein LRIM1, AGAP0063 100.0 3.4E-32 1.2E-36 279.7 7.9 247 27-328 32-281 (317)
308 3o53_A Protein LRIM1, AGAP0063 100.0 3.2E-32 1.1E-36 279.9 5.7 259 31-343 12-272 (317)
309 4azs_A Methyltransferase WBDD; 100.0 1.5E-31 5.2E-36 294.8 9.6 209 432-650 241-471 (569)
310 4fcg_A Uncharacterized protein 100.0 4.8E-30 1.7E-34 264.6 20.3 226 93-324 80-315 (328)
311 3g06_A SSPH2 (leucine-rich rep 100.0 3.8E-29 1.3E-33 277.4 27.2 261 5-328 41-302 (622)
312 4fcg_A Uncharacterized protein 100.0 2.3E-29 7.9E-34 259.5 20.5 233 28-299 80-314 (328)
313 1z7x_W Ribonuclease inhibitor; 100.0 1.4E-32 4.8E-37 298.1 -5.6 341 2-345 1-410 (461)
314 1wwl_A Monocyte differentiatio 100.0 1.1E-30 3.8E-35 267.7 8.5 253 27-300 41-310 (312)
315 3oja_A Leucine-rich immune mol 100.0 9.7E-30 3.3E-34 276.5 13.5 245 28-327 33-286 (487)
316 3oja_A Leucine-rich immune mol 100.0 3E-30 1E-34 280.5 9.5 241 94-350 34-286 (487)
317 2z62_A TOLL-like receptor 4, v 100.0 1.6E-28 5.4E-33 247.2 19.4 227 97-329 10-243 (276)
318 1wwl_A Monocyte differentiatio 100.0 4.6E-30 1.6E-34 263.2 7.1 248 89-347 38-310 (312)
319 3g06_A SSPH2 (leucine-rich rep 100.0 3.1E-27 1.1E-31 262.0 27.2 258 29-347 40-298 (622)
320 2z62_A TOLL-like receptor 4, v 100.0 1.7E-27 5.7E-32 239.7 21.1 225 14-300 14-238 (276)
321 1z7x_W Ribonuclease inhibitor; 100.0 1.1E-30 3.8E-35 283.1 -4.2 233 92-325 140-413 (461)
322 2o6q_A Variable lymphocyte rec 99.9 7.2E-27 2.5E-31 234.2 22.1 206 95-327 17-222 (270)
323 2o6q_A Variable lymphocyte rec 99.9 1.4E-26 4.9E-31 232.0 21.3 197 7-226 19-215 (270)
324 1p9a_G Platelet glycoprotein I 99.9 1.3E-26 4.3E-31 234.6 20.8 201 116-324 7-209 (290)
325 1p9a_G Platelet glycoprotein I 99.9 1.3E-26 4.5E-31 234.4 20.4 202 90-300 6-209 (290)
326 3rfs_A Internalin B, repeat mo 99.9 8.9E-27 3E-31 233.7 14.2 209 27-287 39-247 (272)
327 3en9_A Glycoprotease, O-sialog 99.9 2.6E-27 9E-32 259.5 9.6 186 428-628 339-539 (540)
328 3rfs_A Internalin B, repeat mo 99.9 3E-26 1E-30 229.9 16.1 219 95-328 20-240 (272)
329 2xwt_C Thyrotropin receptor; s 99.9 1.1E-25 3.8E-30 221.3 16.4 185 19-227 23-216 (239)
330 4glp_A Monocyte differentiatio 99.9 2.4E-25 8.1E-30 227.9 14.2 225 94-324 64-308 (310)
331 4ay9_X Follicle-stimulating ho 99.9 6.7E-25 2.3E-29 228.5 17.2 242 32-319 12-255 (350)
332 2xwt_C Thyrotropin receptor; s 99.9 5.6E-25 1.9E-29 216.2 15.7 193 122-320 33-236 (239)
333 3goz_A Leucine-rich repeat-con 99.9 8.1E-27 2.8E-31 244.2 2.4 162 34-209 3-184 (362)
334 4ay9_X Follicle-stimulating ho 99.9 1.1E-24 3.7E-29 226.9 17.6 232 17-272 19-256 (350)
335 3m19_A Variable lymphocyte rec 99.9 2.3E-24 7.8E-29 213.5 18.8 177 6-205 16-192 (251)
336 1h6u_A Internalin H; cell adhe 99.9 4.1E-24 1.4E-28 218.2 19.8 215 94-326 19-233 (308)
337 2ca6_A RAN GTPase-activating p 99.9 1.1E-26 3.7E-31 245.7 -0.5 135 168-302 159-319 (386)
338 3goz_A Leucine-rich repeat-con 99.9 5.9E-26 2E-30 237.6 4.6 251 57-325 2-299 (362)
339 2ast_B S-phase kinase-associat 99.9 1.5E-25 5.1E-30 232.2 7.0 250 30-328 48-311 (336)
340 3m19_A Variable lymphocyte rec 99.9 8.4E-24 2.9E-28 209.4 19.3 178 95-299 15-192 (251)
341 4glp_A Monocyte differentiatio 99.9 1.1E-24 3.8E-29 222.9 13.3 222 122-347 66-308 (310)
342 1h6u_A Internalin H; cell adhe 99.9 6.2E-24 2.1E-28 216.9 16.9 195 90-300 37-231 (308)
343 2ca6_A RAN GTPase-activating p 99.9 4.9E-26 1.7E-30 240.6 0.5 238 88-326 26-319 (386)
344 2ast_B S-phase kinase-associat 99.9 2.3E-25 7.9E-30 230.7 4.0 255 3-307 46-314 (336)
345 1zar_A RIO2 kinase; serine kin 99.9 3.1E-24 1.1E-28 215.6 12.0 166 416-612 81-274 (282)
346 2o6s_A Variable lymphocyte rec 99.9 8.7E-23 3E-27 196.0 14.4 182 6-217 9-190 (208)
347 2o6s_A Variable lymphocyte rec 99.9 4.1E-22 1.4E-26 191.3 16.2 130 95-226 29-158 (208)
348 3ogk_B Coronatine-insensitive 99.9 3.3E-24 1.1E-28 239.8 1.1 233 89-325 265-528 (592)
349 3ogk_B Coronatine-insensitive 99.9 6.3E-25 2.1E-29 245.7 -6.5 39 285-323 462-501 (592)
350 2xot_A Amphoterin-induced prot 99.9 6.7E-22 2.3E-26 206.6 14.3 174 32-227 21-200 (361)
351 3cvr_A Invasion plasmid antige 99.9 1.1E-21 3.7E-26 215.0 16.5 187 95-310 60-254 (571)
352 3cvr_A Invasion plasmid antige 99.9 2.7E-21 9.1E-26 211.9 17.4 181 121-328 60-248 (571)
353 2v9t_B SLIT homolog 2 protein 99.9 7.2E-22 2.5E-26 191.1 11.1 156 147-327 14-169 (220)
354 1h6t_A Internalin B; cell adhe 99.9 5.6E-22 1.9E-26 200.6 10.7 192 93-324 23-214 (291)
355 2v70_A SLIT-2, SLIT homolog 2 99.9 6.5E-22 2.2E-26 191.4 10.3 156 147-327 14-170 (220)
356 1h6t_A Internalin B; cell adhe 99.9 3.6E-21 1.2E-25 194.7 15.7 191 122-349 26-216 (291)
357 2v9t_B SLIT homolog 2 protein 99.9 5.8E-21 2E-25 184.7 16.1 114 90-205 52-165 (220)
358 2xot_A Amphoterin-induced prot 99.9 2.1E-21 7.2E-26 202.9 13.6 177 96-299 20-202 (361)
359 1m9s_A Internalin B; cell inva 99.8 1.2E-21 4.2E-26 216.9 11.2 192 28-252 20-211 (605)
360 2v70_A SLIT-2, SLIT homolog 2 99.8 1.1E-20 3.9E-25 182.6 16.1 131 96-227 34-164 (220)
361 1m9s_A Internalin B; cell inva 99.8 6.9E-21 2.4E-25 210.9 13.6 194 92-301 19-212 (605)
362 3e6j_A Variable lymphocyte rec 99.8 3.8E-20 1.3E-24 180.2 16.7 151 7-181 22-172 (229)
363 3e6j_A Variable lymphocyte rec 99.8 7.3E-20 2.5E-24 178.2 16.1 156 146-327 21-176 (229)
364 2p1m_B Transport inhibitor res 99.8 1.3E-22 4.3E-27 227.0 -4.9 250 92-345 182-493 (594)
365 2p1m_B Transport inhibitor res 99.8 4.6E-22 1.6E-26 222.4 -1.6 334 5-345 106-518 (594)
366 1dce_A Protein (RAB geranylger 99.8 1.5E-22 5E-27 223.0 -6.0 203 91-317 346-567 (567)
367 1xeu_A Internalin C; cellular 99.8 1.8E-20 6.2E-25 186.5 9.6 167 122-325 21-187 (263)
368 1xeu_A Internalin C; cellular 99.8 1.4E-20 4.6E-25 187.4 7.9 169 92-275 17-185 (263)
369 1dce_A Protein (RAB geranylger 99.8 1.6E-22 5.5E-27 222.7 -8.0 189 118-329 348-552 (567)
370 1zth_A RIO1 serine protein kin 99.8 3.6E-20 1.2E-24 183.8 8.3 143 420-575 42-219 (258)
371 4b8c_D Glucose-repressible alc 99.8 1.3E-20 4.6E-25 213.8 4.8 177 94-304 173-359 (727)
372 4ezg_A Putative uncharacterize 99.8 4.3E-19 1.5E-23 168.5 14.3 155 115-299 40-194 (197)
373 4ezg_A Putative uncharacterize 99.8 2E-19 6.8E-24 170.8 11.8 151 28-205 43-194 (197)
374 1w8a_A SLIT protein; signaling 99.8 2.3E-19 7.9E-24 169.5 8.8 127 171-300 11-140 (192)
375 3sb4_A Hypothetical leucine ri 99.8 1.8E-19 6.1E-24 185.8 8.3 281 28-317 24-328 (329)
376 4fdw_A Leucine rich hypothetic 99.8 1.6E-17 5.5E-22 175.0 21.2 263 29-323 113-383 (401)
377 4b8c_D Glucose-repressible alc 99.8 1.7E-19 5.9E-24 204.8 5.4 163 28-210 172-334 (727)
378 1w8a_A SLIT protein; signaling 99.8 2.2E-18 7.4E-23 162.8 11.6 128 147-277 11-141 (192)
379 3sb4_A Hypothetical leucine ri 99.7 3.9E-18 1.3E-22 175.7 12.5 265 5-293 26-328 (329)
380 4fdw_A Leucine rich hypothetic 99.7 8.7E-17 3E-21 169.3 22.6 242 29-299 135-383 (401)
381 2wfh_A SLIT homolog 2 protein 99.7 2.1E-18 7.2E-23 162.9 9.1 111 217-327 32-143 (193)
382 2ell_A Acidic leucine-rich nuc 99.7 7E-18 2.4E-22 155.7 11.5 137 28-186 23-164 (168)
383 2wfh_A SLIT homolog 2 protein 99.7 5.6E-17 1.9E-21 153.1 13.8 126 96-227 12-137 (193)
384 4gyi_A RIO2 kinase; protein ki 99.7 5.6E-18 1.9E-22 174.2 7.5 144 418-575 88-265 (397)
385 2ell_A Acidic leucine-rich nuc 99.7 3.6E-17 1.2E-21 150.9 11.3 131 93-227 23-158 (168)
386 2je0_A Acidic leucine-rich nuc 99.7 2.7E-17 9.3E-22 148.4 9.9 129 28-177 16-149 (149)
387 2o6r_A Variable lymphocyte rec 99.7 1.1E-16 3.6E-21 149.1 13.6 93 90-184 48-140 (177)
388 2o6r_A Variable lymphocyte rec 99.7 2.7E-16 9.3E-21 146.3 13.5 128 95-227 8-135 (177)
389 2je0_A Acidic leucine-rich nuc 99.7 4.2E-17 1.5E-21 147.2 7.6 129 92-224 15-148 (149)
390 1a9n_A U2A', U2A'; complex (nu 99.7 1.1E-16 3.8E-21 148.8 10.7 136 22-181 12-153 (176)
391 1a9n_A U2A', U2A'; complex (nu 99.7 1.4E-16 4.9E-21 148.1 8.7 133 89-227 14-151 (176)
392 1ds9_A Outer arm dynein; leuci 99.6 1.4E-17 4.8E-22 158.1 -4.2 152 28-205 17-185 (198)
393 1ds9_A Outer arm dynein; leuci 99.6 1.5E-17 5E-22 158.0 -6.7 81 122-205 20-106 (198)
394 3g39_A Variable lymphocyte rec 99.6 8E-15 2.7E-19 135.2 11.1 91 238-328 30-120 (170)
395 3g39_A Variable lymphocyte rec 99.6 9.5E-15 3.2E-19 134.7 11.4 108 95-207 10-117 (170)
396 2r9u_A Variable lymphocyte rec 99.5 1.8E-14 6E-19 133.4 11.4 107 220-328 16-123 (174)
397 2r9u_A Variable lymphocyte rec 99.5 2.4E-14 8.2E-19 132.5 11.4 106 96-206 14-119 (174)
398 4fs7_A Uncharacterized protein 99.5 3.5E-13 1.2E-17 142.2 21.5 287 21-320 61-376 (394)
399 4fs7_A Uncharacterized protein 99.5 8.1E-13 2.8E-17 139.4 20.1 268 40-320 58-353 (394)
400 4gt6_A Cell surface protein; l 99.4 1.2E-11 4E-16 130.4 22.5 283 29-323 64-370 (394)
401 2ifg_A High affinity nerve gro 99.4 2E-13 7E-18 141.4 8.3 95 230-326 24-119 (347)
402 3un9_A NLR family member X1; l 99.4 4E-15 1.4E-19 155.1 -4.7 162 28-206 71-253 (372)
403 3un9_A NLR family member X1; l 99.4 5.5E-15 1.9E-19 154.1 -5.1 168 121-306 73-259 (372)
404 3tm0_A Aminoglycoside 3'-phosp 99.4 1.8E-12 6.3E-17 128.5 12.9 147 421-574 10-213 (263)
405 4gt6_A Cell surface protein; l 99.4 3E-11 1E-15 127.3 21.1 283 27-323 85-391 (394)
406 2ifg_A High affinity nerve gro 99.3 3.4E-12 1.2E-16 132.2 10.5 99 125-226 13-113 (347)
407 1nd4_A Aminoglycoside 3'-phosp 99.3 1.4E-11 4.7E-16 122.0 11.5 137 426-574 21-214 (264)
408 4h09_A Hypothetical leucine ri 99.2 2.9E-09 9.9E-14 111.4 22.9 282 27-320 44-343 (379)
409 4h09_A Hypothetical leucine ri 99.1 3.9E-09 1.3E-13 110.4 22.1 266 47-343 40-343 (379)
410 3dxp_A Putative acyl-COA dehyd 99.1 3.9E-10 1.3E-14 117.2 12.7 142 429-574 42-248 (359)
411 3sg8_A APH(2'')-ID; antibiotic 99.1 4.2E-10 1.4E-14 114.0 10.2 194 430-635 25-295 (304)
412 2ra8_A Uncharacterized protein 99.0 1.8E-10 6.2E-15 118.8 4.8 153 164-321 168-341 (362)
413 2ra8_A Uncharacterized protein 98.9 2.3E-10 7.7E-15 118.2 2.0 209 27-249 105-341 (362)
414 3r70_A Aminoglycoside phosphot 98.8 5.9E-08 2E-12 98.8 13.9 136 426-574 38-237 (320)
415 3d1u_A Putative fructosamine-3 98.6 1.6E-07 5.4E-12 93.8 12.3 77 428-508 18-97 (288)
416 3tdw_A Gentamicin resistance p 98.6 4.4E-07 1.5E-11 91.6 13.9 136 430-574 24-224 (306)
417 3rw6_A Nuclear RNA export fact 98.6 8.6E-09 3E-13 100.8 1.1 96 125-222 148-257 (267)
418 3rw6_A Nuclear RNA export fact 98.6 8.9E-09 3.1E-13 100.7 0.7 108 88-198 135-257 (267)
419 1io0_A Tropomodulin; LRR prote 98.5 1.8E-08 6.2E-13 93.7 2.1 116 89-205 31-164 (185)
420 4gkh_A Aminoglycoside 3'-phosp 98.5 9E-07 3.1E-11 87.6 14.0 136 431-574 30-223 (272)
421 1io0_A Tropomodulin; LRR prote 98.5 3.5E-08 1.2E-12 91.7 2.4 105 122-226 38-161 (185)
422 3ats_A Putative uncharacterize 98.5 4E-07 1.4E-11 94.1 9.8 81 430-510 25-122 (357)
423 3ovc_A Hygromycin-B 4-O-kinase 98.4 8.9E-07 3E-11 91.5 12.1 77 427-509 43-122 (362)
424 2olc_A MTR kinase, methylthior 98.1 9E-06 3.1E-10 85.3 11.3 75 430-506 35-120 (397)
425 2q83_A YTAA protein; 2635576, 98.0 2E-05 6.7E-10 80.7 11.5 139 431-574 38-252 (346)
426 3jr1_A Putative fructosamine-3 98.0 4.7E-05 1.6E-09 76.5 13.3 137 429-570 40-232 (312)
427 3f7w_A Putative fructosamine-3 97.7 0.00014 4.7E-09 72.4 11.4 78 426-507 16-96 (288)
428 2ppq_A HSK, HK, homoserine kin 97.7 0.00014 4.9E-09 73.6 11.7 158 414-574 6-217 (322)
429 2pyw_A Uncharacterized protein 97.7 0.00013 4.3E-09 77.1 11.1 74 429-505 38-122 (420)
430 3e4g_A ATP synthase subunit S, 97.7 1.8E-05 6E-10 71.7 3.3 84 238-321 61-150 (176)
431 3e4g_A ATP synthase subunit S, 97.7 1.8E-05 6.2E-10 71.7 2.9 81 122-202 63-149 (176)
432 3csv_A Aminoglycoside phosphot 97.6 0.00027 9.2E-09 71.9 11.5 139 431-574 24-217 (333)
433 3rfe_A Platelet glycoprotein I 97.6 8.3E-05 2.8E-09 64.2 6.2 52 14-66 15-68 (130)
434 3dxq_A Choline/ethanolamine ki 97.5 0.00025 8.4E-09 71.1 9.2 72 429-508 22-95 (301)
435 3feg_A Choline/ethanolamine ki 97.5 0.00027 9.1E-09 73.0 9.6 139 431-574 56-254 (379)
436 3rfe_A Platelet glycoprotein I 97.5 0.00013 4.4E-09 62.9 6.0 56 97-157 11-68 (130)
437 1pgv_A TMD-1, tropomodulin TMD 97.4 4.8E-05 1.6E-09 70.2 2.8 17 91-107 38-55 (197)
438 1zyl_A Hypothetical protein YI 97.4 0.0007 2.4E-08 68.6 11.8 158 413-574 9-223 (328)
439 1nw1_A Choline kinase (49.2 KD 97.4 0.00037 1.2E-08 73.5 9.1 73 430-508 78-159 (429)
440 1pgv_A TMD-1, tropomodulin TMD 97.4 5.4E-05 1.8E-09 69.9 2.4 107 121-227 42-168 (197)
441 2qg7_A Ethanolamine kinase PV0 97.4 0.0008 2.7E-08 71.3 11.3 74 430-508 113-188 (458)
442 3c5i_A Choline kinase; choline 97.2 0.00078 2.7E-08 69.6 8.8 73 431-508 39-121 (369)
443 3i1a_A Spectinomycin phosphotr 97.2 0.00096 3.3E-08 68.0 9.1 64 438-508 36-108 (339)
444 3f2s_A CK, chetk-alpha, cholin 97.0 0.0031 1.1E-07 65.3 10.5 140 431-574 58-280 (401)
445 2yle_A Protein spire homolog 1 96.8 0.0019 6.5E-08 59.9 6.8 117 507-641 34-156 (229)
446 3mes_A Choline kinase; malaria 96.5 0.0065 2.2E-07 63.5 9.2 74 430-508 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 95.1 0.068 2.3E-06 55.5 9.6 30 545-574 245-280 (401)
448 4ann_A ESSB; membrane protein, 88.1 1.3 4.3E-05 41.0 7.5 116 479-630 43-160 (215)
449 4ano_A ESSB; membrane protein, 84.1 2.7 9.3E-05 38.9 7.6 115 479-630 48-165 (219)
450 2ks1_B Epidermal growth factor 81.4 1.8 6E-05 28.6 3.7 17 369-385 12-28 (44)
451 3cxl_A N-chimerin; SH2, RHO-GA 76.5 0.3 1E-05 51.6 -1.9 59 429-490 146-213 (463)
452 2l2t_A Receptor tyrosine-prote 70.4 4.4 0.00015 26.7 3.3 12 371-382 13-24 (44)
453 2lz0_A Uncharacterized protein 65.1 12 0.0004 29.8 5.7 48 130-178 6-53 (100)
454 2jwa_A Receptor tyrosine-prote 61.3 6.8 0.00023 25.7 2.8 10 369-378 12-21 (44)
455 2lz0_A Uncharacterized protein 60.4 20 0.00069 28.4 6.3 45 250-295 8-52 (100)
456 2k9y_A Ephrin type-A receptor 57.0 6.3 0.00022 25.4 2.2 10 371-380 16-25 (41)
457 2x6h_A GH13170P, VPS34, phosph 50.5 2.8E+02 0.0097 30.3 15.4 44 523-573 530-575 (696)
458 1cja_A Protein (actin-fragmin 47.5 73 0.0025 31.3 9.0 136 430-574 74-237 (342)
459 2k1k_A Ephrin type-A receptor 46.9 16 0.00055 23.1 2.8 11 368-378 10-20 (38)
460 2ks1_B Epidermal growth factor 38.7 22 0.00076 23.3 2.6 28 368-395 14-41 (44)
461 3ls8_A Phosphatidylinositol 3- 37.1 4.2E+02 0.014 28.4 15.6 45 522-573 455-501 (614)
462 2jp3_A FXYD domain-containing 20.7 53 0.0018 23.5 2.1 19 372-390 20-38 (67)
463 3eps_A Isocitrate dehydrogenas 20.2 5.8E+02 0.02 26.8 10.5 135 432-575 313-482 (578)
No 1
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=5.8e-54 Score=432.64 Aligned_cols=224 Identities=23% Similarity=0.338 Sum_probs=202.3
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc---cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ---CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
++|++.+.||+|+||+||+|+.. +|+.||||++... .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46999999999999999999865 6999999999754 2334567899999999999999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
|||+||+|.+++...+ .+++.++..|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999998755 699999999999999999999999 999999999999999999999999999997754444
Q ss_pred ccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch-----------------------hhhhhhcc
Q 041689 581 SMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS-----------------------FVFNLAME 637 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~-----------------------~l~~l~~~ 637 (652)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||.. .+++++.+
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~ 267 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEK 267 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHHH
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccCHHHHHHHHH
Confidence 4445567899999999999999999999999999999999999999654 27899999
Q ss_pred cchhhhccccCccCC
Q 041689 638 CTIESLELRINAKEI 652 (652)
Q Consensus 638 ~l~~~p~~Rpt~~ei 652 (652)
||..||++|||++|+
T Consensus 268 lL~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 268 LLVLDATKRLGCEEM 282 (311)
T ss_dssp HSCSSGGGSTTSGGG
T ss_pred HccCCHhHCcChHHH
Confidence 999999999999873
No 2
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.5e-53 Score=436.22 Aligned_cols=221 Identities=23% Similarity=0.264 Sum_probs=200.6
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEcc
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHM 503 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 503 (652)
..|+..+.||+|+||+||+|++. +|+.||||+++.......+.+.+|++++++++|||||+++++|.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46889999999999999999875 69999999998766666678899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCccc
Q 041689 504 PHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMT 583 (652)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 583 (652)
+||+|.+++... .+++.++..|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+.. ....
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~--~~~~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPR 226 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS--SSCC
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCC--CCCc
Confidence 999999998764 599999999999999999999999 999999999999999999999999999987632 2223
Q ss_pred cccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch--------------------------hhhhhhcc
Q 041689 584 QTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS--------------------------FVFNLAME 637 (652)
Q Consensus 584 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~--------------------------~l~~l~~~ 637 (652)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||.. .+.+++.+
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 306 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 306 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHH
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHH
Confidence 4557899999999999999999999999999999999999999643 37889999
Q ss_pred cchhhhccccCccCC
Q 041689 638 CTIESLELRINAKEI 652 (652)
Q Consensus 638 ~l~~~p~~Rpt~~ei 652 (652)
||..||++|||++|+
T Consensus 307 ~L~~dP~~R~ta~e~ 321 (346)
T 4fih_A 307 LLVRDPAQRATAAEL 321 (346)
T ss_dssp HSCSSTTTSCCHHHH
T ss_pred HcCCChhHCcCHHHH
Confidence 999999999999874
No 3
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=8.8e-54 Score=438.55 Aligned_cols=223 Identities=19% Similarity=0.291 Sum_probs=193.1
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 501 (652)
++|++.+.||+|+||+||+|++. +|+.||||+++.. .....+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 68999999999999999999865 6999999999754 23456788999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 502 HMPHGSLEKCLYSSN-CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
||+||+|.+++...+ ..+++.++..|+.||+.||+|||++ ||+||||||+|||+++++.+||+|||+|+.... .
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~--~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS--T 178 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH--H
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC--C
Confidence 999999999997554 3578999999999999999999999 999999999999999999999999999986521 1
Q ss_pred ccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch------------------------hhhhhhc
Q 041689 581 SMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS------------------------FVFNLAM 636 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~------------------------~l~~l~~ 636 (652)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||.. .+.+++.
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~ 258 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVS 258 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHH
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHHH
Confidence 1223456799999999999999999999999999999999999999643 3789999
Q ss_pred ccchhhhccccCccCC
Q 041689 637 ECTIESLELRINAKEI 652 (652)
Q Consensus 637 ~~l~~~p~~Rpt~~ei 652 (652)
+||+.||++|||++|+
T Consensus 259 ~~L~~dP~~R~s~~e~ 274 (350)
T 4b9d_A 259 QLFKRNPRDRPSVNSI 274 (350)
T ss_dssp HHTCSSGGGSCCHHHH
T ss_pred HHccCChhHCcCHHHH
Confidence 9999999999999874
No 4
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5.9e-54 Score=433.99 Aligned_cols=225 Identities=27% Similarity=0.419 Sum_probs=197.8
Q ss_pred cCCCccceeccccceEEEEEEeC------CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG------DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKEL 498 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 498 (652)
++|.+.+.||+|+||+||+|++. ++..||||+++.......++|.+|++++++++|||||+++|+|.+++..|+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46788899999999999999853 478899999987666677889999999999999999999999999999999
Q ss_pred EEEccCCCChhhhhhcCC------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 041689 499 VLEHMPHGSLEKCLYSSN------------CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHL 566 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~~~------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl 566 (652)
|||||++|+|.+++...+ ..+++.++..|+.|++.||+|||++ +|+||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence 999999999999997542 3689999999999999999999999 9999999999999999999999
Q ss_pred ecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch----------------
Q 041689 567 SDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS---------------- 629 (652)
Q Consensus 567 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~---------------- 629 (652)
+|||+|+.....+.........||+.|||||++.++.|+.++|||||||++|||+| |+.||..
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~ 249 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVL 249 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCC
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC
Confidence 99999987643332233334568999999999999999999999999999999999 8998543
Q ss_pred --------hhhhhhcccchhhhccccCccCC
Q 041689 630 --------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 --------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 250 ~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i 280 (299)
T 4asz_A 250 QRPRTCPQEVYELMLGCWQREPHMRKNIKGI 280 (299)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence 38899999999999999999874
No 5
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.4e-53 Score=433.55 Aligned_cols=225 Identities=26% Similarity=0.398 Sum_probs=191.4
Q ss_pred cCCCccceeccccceEEEEEEeC------CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG------DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKEL 498 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 498 (652)
++|...+.||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++|+|.+++..|+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45677889999999999999853 478899999987666677889999999999999999999999999999999
Q ss_pred EEEccCCCChhhhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcE
Q 041689 499 VLEHMPHGSLEKCLYSSN--------------CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVA 564 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~~~--------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~ 564 (652)
|||||++|+|.+++.... ..+++.++..|+.|++.||+|||++ +||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcE
Confidence 999999999999987542 2589999999999999999999999 99999999999999999999
Q ss_pred EEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch--------------
Q 041689 565 HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS-------------- 629 (652)
Q Consensus 565 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~-------------- 629 (652)
||+|||+++.....+.........||+.|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~ 277 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR 277 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTC
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999987644333333455679999999999999999999999999999999999 8998543
Q ss_pred ----------hhhhhhcccchhhhccccCccCC
Q 041689 630 ----------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ----------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 278 ~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei 310 (329)
T 4aoj_A 278 ELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 310 (329)
T ss_dssp CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHH
T ss_pred CCCCcccccHHHHHHHHHHcCcChhHCcCHHHH
Confidence 37899999999999999999875
No 6
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=9.3e-53 Score=425.07 Aligned_cols=224 Identities=25% Similarity=0.391 Sum_probs=190.0
Q ss_pred HhcCCCccceeccccceEEEEEEeCCCcEEEEEEeecc--cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
..++|...+.||+|+||+||+|++. ..||||+++.. .....+.|.+|++++++++|||||++++++.. +..++||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 3457788899999999999999875 36999998744 23456789999999999999999999998865 5689999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
|||++|+|.+++......+++.++..|+.|++.||+|||++ +||||||||+|||+++++.+||+|||+|+.......
T Consensus 111 Ey~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred EcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 99999999999987766899999999999999999999999 999999999999999999999999999987643333
Q ss_pred ccccccccCCccccCcccccc---CccCcccchhhHHHHHHHHHhCCCCcch----------------------------
Q 041689 581 SMTQTQTLATIGYIAPEYGRE---GRVFANGDVYSFGIMLMEIHSAKQQCVS---------------------------- 629 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~vl~elltg~~p~~~---------------------------- 629 (652)
.......+||+.|||||++.+ ++|+.++|||||||++|||+||+.||..
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 267 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCP 267 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSC
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccch
Confidence 333455689999999999863 4689999999999999999999999643
Q ss_pred -hhhhhhcccchhhhccccCccCC
Q 041689 630 -FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 268 ~~l~~li~~cl~~dP~~RPs~~ei 291 (307)
T 3omv_A 268 KAMKRLVADCVKKVKEERPLFPQI 291 (307)
T ss_dssp HHHHHHHHHHTCSSSTTSCCHHHH
T ss_pred HHHHHHHHHHcCCCHhHCcCHHHH
Confidence 26789999999999999999874
No 7
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=6.9e-53 Score=428.01 Aligned_cols=224 Identities=25% Similarity=0.394 Sum_probs=195.5
Q ss_pred CCCccceeccccceEEEEEEeC------CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEE
Q 041689 426 GFNENNLIGKGGFGTIYKSRIG------DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKEL 498 (652)
Q Consensus 426 ~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 498 (652)
+++..+.||+|+||+||+|++. +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 4566789999999999999852 46789999997543 3345789999999999999999999999999999999
Q ss_pred EEEccCCCChhhhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCc
Q 041689 499 VLEHMPHGSLEKCLYSSN---------------CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMV 563 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~ 563 (652)
|||||++|+|.+++.... ..+++.++..|+.|||+||+|||++ +||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 999999999999996432 2589999999999999999999999 9999999999999999999
Q ss_pred EEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch-------------
Q 041689 564 AHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS------------- 629 (652)
Q Consensus 564 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~------------- 629 (652)
+||+|||+++.....+.........||+.|||||++.++.|+.++|||||||++|||+| |+.||..
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~ 263 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR 263 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTT
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 99999999987644333333455679999999999999999999999999999999998 8888543
Q ss_pred -----------hhhhhhcccchhhhccccCccCC
Q 041689 630 -----------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -----------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++||||+||
T Consensus 264 ~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei 297 (308)
T 4gt4_A 264 QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297 (308)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence 37899999999999999999875
No 8
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.2e-52 Score=437.99 Aligned_cols=221 Identities=23% Similarity=0.267 Sum_probs=201.0
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEcc
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHM 503 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 503 (652)
..|+..+.||+|+||.||+|++. +|+.||||++........+.+.+|+++|++++|||||+++++|.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56999999999999999999865 69999999998766666678999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCccc
Q 041689 504 PHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMT 583 (652)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 583 (652)
+||+|.+++... .+++.++..|+.||+.||+|||++ |||||||||+|||++.+|.+||+|||+|+.+... ...
T Consensus 231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~--~~~ 303 (423)
T 4fie_A 231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPR 303 (423)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSS--CCC
T ss_pred CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCC--Ccc
Confidence 999999998765 499999999999999999999999 9999999999999999999999999999876322 223
Q ss_pred cccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch--------------------------hhhhhhcc
Q 041689 584 QTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS--------------------------FVFNLAME 637 (652)
Q Consensus 584 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~--------------------------~l~~l~~~ 637 (652)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||.. .+.+++.+
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 383 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 383 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHH
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHH
Confidence 4556899999999999999999999999999999999999999643 37899999
Q ss_pred cchhhhccccCccCC
Q 041689 638 CTIESLELRINAKEI 652 (652)
Q Consensus 638 ~l~~~p~~Rpt~~ei 652 (652)
||..||++|||++|+
T Consensus 384 ~L~~dP~~R~ta~el 398 (423)
T 4fie_A 384 LLVRDPAQRATAAEL 398 (423)
T ss_dssp HSCSSTTTSCCHHHH
T ss_pred HcCCChhHCcCHHHH
Confidence 999999999999874
No 9
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.9e-52 Score=413.78 Aligned_cols=220 Identities=20% Similarity=0.297 Sum_probs=183.5
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
++|++.+.||+|+||+||+|+.. +|+.||||+++... ......+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 58999999999999999999864 69999999997542 234567899999999999999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
||+ +|+|.+++...+ .+++.++..++.|++.||+|||++ ||+||||||+|||+++++.+||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~--- 164 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--- 164 (275)
T ss_dssp ECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC---
Confidence 999 679999988765 799999999999999999999999 999999999999999999999999999986532
Q ss_pred ccccccccCCccccCccccccCcc-CcccchhhHHHHHHHHHhCCCCcch-----------------------hhhhhhc
Q 041689 581 SMTQTQTLATIGYIAPEYGREGRV-FANGDVYSFGIMLMEIHSAKQQCVS-----------------------FVFNLAM 636 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~p~~~-----------------------~l~~l~~ 636 (652)
.......+||+.|||||++.+..| +.++||||+||++|||+||+.||.. .+.+++.
T Consensus 165 ~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~ 244 (275)
T 3hyh_A 165 GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIK 244 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHH
T ss_pred CCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 222345679999999999998876 5789999999999999999999654 3788999
Q ss_pred ccchhhhccccCccCC
Q 041689 637 ECTIESLELRINAKEI 652 (652)
Q Consensus 637 ~~l~~~p~~Rpt~~ei 652 (652)
+||+.||++|||++|+
T Consensus 245 ~~L~~dP~~R~s~~ei 260 (275)
T 3hyh_A 245 RMLIVNPLNRISIHEI 260 (275)
T ss_dssp HHSCSSGGGSCCHHHH
T ss_pred HHccCChhHCcCHHHH
Confidence 9999999999999874
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=6.4e-52 Score=415.90 Aligned_cols=216 Identities=25% Similarity=0.359 Sum_probs=188.2
Q ss_pred CccceeccccceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHHhcCCCeeeeEEeeeec----CCceEEEE
Q 041689 428 NENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISSCSN----EEFKELVL 500 (652)
Q Consensus 428 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~ 500 (652)
...+.||+|+||+||+|++. +++.||+|++... .....+.+.+|++++++++|||||+++++|.+ ++..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 55678999999999999865 6899999999754 23345679999999999999999999999864 35679999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCC--eEecCCCCCCeeeC-CCCcEEEecccCCccccC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP--VIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~dlkp~NIll~-~~~~~kl~Dfg~~~~~~~ 577 (652)
|||+||+|.+++.... .+++..+..|+.||+.||+|||++ + |+||||||+|||++ .++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~- 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR- 183 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC-
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC-
Confidence 9999999999998654 799999999999999999999998 6 99999999999998 47899999999998542
Q ss_pred CCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch--------------------------hh
Q 041689 578 EDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS--------------------------FV 631 (652)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~--------------------------~l 631 (652)
.......+||+.|||||++.+ +|+.++|||||||++|||+||+.||.. .+
T Consensus 184 ---~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 259 (290)
T 3fpq_A 184 ---ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV 259 (290)
T ss_dssp ---TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHH
T ss_pred ---CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHH
Confidence 223345689999999998864 699999999999999999999999743 26
Q ss_pred hhhhcccchhhhccccCccCC
Q 041689 632 FNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 632 ~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+++.+||+.||++|||++||
T Consensus 260 ~~li~~~L~~dP~~R~s~~e~ 280 (290)
T 3fpq_A 260 KEIIEGCIRQNKDERYSIKDL 280 (290)
T ss_dssp HHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHHHHHccCChhHCcCHHHH
Confidence 789999999999999999874
No 11
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=3.4e-52 Score=424.91 Aligned_cols=220 Identities=22% Similarity=0.229 Sum_probs=191.7
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 502 (652)
.+.|...++||+|+||+||+|++. +|+.||||+++.+.. ..+|++++++++|||||++++++.+++..|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 356788899999999999999965 699999999975422 24699999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCC-cEEEecccCCccccCCCCc
Q 041689 503 MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM-VAHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~-~~kl~Dfg~~~~~~~~~~~ 581 (652)
|+||+|.+++...+ .+++.++..|+.|++.||+|||++ +||||||||+|||++.+| ++||+|||+|+.+......
T Consensus 132 ~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 99999999998765 699999999999999999999999 999999999999999887 6999999999876432211
Q ss_pred c---ccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch--------------------------hhh
Q 041689 582 M---TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS--------------------------FVF 632 (652)
Q Consensus 582 ~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~--------------------------~l~ 632 (652)
. .....+||+.|||||++.+..|+.++||||+||++|||+||+.||.. .+.
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~ 287 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTA 287 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHH
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHH
Confidence 1 12345799999999999999999999999999999999999999643 268
Q ss_pred hhhcccchhhhccccCccCC
Q 041689 633 NLAMECTIESLELRINAKEI 652 (652)
Q Consensus 633 ~l~~~~l~~~p~~Rpt~~ei 652 (652)
+++.+||+.||++|||++||
T Consensus 288 ~li~~~L~~dP~~R~sa~el 307 (336)
T 4g3f_A 288 QAIQEGLRKEPVHRASAMEL 307 (336)
T ss_dssp HHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHccCCHhHCcCHHHH
Confidence 89999999999999999874
No 12
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.6e-52 Score=419.70 Aligned_cols=220 Identities=23% Similarity=0.279 Sum_probs=189.2
Q ss_pred cCCCccceeccccceEEEEEEeC----CCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG----DGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKEL 498 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 498 (652)
++|++.+.||+|+||+||+|+.. +++.||||+++... ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 56999999999999999999852 47889999997542 2334568899999999999999999999999999999
Q ss_pred EEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCC
Q 041689 499 VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE 578 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 578 (652)
|||||+||+|.+++...+ .+++.++..++.|++.||+|||++ ||+||||||+|||+++++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999998765 699999999999999999999999 9999999999999999999999999999865322
Q ss_pred CCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch-----------------------hhhhhh
Q 041689 579 DQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS-----------------------FVFNLA 635 (652)
Q Consensus 579 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~-----------------------~l~~l~ 635 (652)
.......+||+.|||||++.+..|+.++||||+||++|||+||+.||.. .+.+++
T Consensus 180 --~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li 257 (304)
T 3ubd_A 180 --EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLL 257 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred --CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCcCCHHHHHHH
Confidence 2233456799999999999999999999999999999999999999644 378999
Q ss_pred cccchhhhccccCcc
Q 041689 636 MECTIESLELRINAK 650 (652)
Q Consensus 636 ~~~l~~~p~~Rpt~~ 650 (652)
.+||+.||++|||+.
T Consensus 258 ~~~L~~dP~~R~ta~ 272 (304)
T 3ubd_A 258 RMLFKRNPANRLGAG 272 (304)
T ss_dssp HHHTCSSGGGSTTCS
T ss_pred HHHcccCHHHCCCCC
Confidence 999999999999974
No 13
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.5e-50 Score=418.07 Aligned_cols=236 Identities=21% Similarity=0.320 Sum_probs=202.5
Q ss_pred cccHHHHHHHhcCCCccceeccccceEEEEEEeC------CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCC-Ceeee
Q 041689 414 RFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIG------DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHY-RNLVK 485 (652)
Q Consensus 414 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h-~niv~ 485 (652)
.++..+++...++|++.+.||+|+||+||+|++. +++.||||+++... ....+.+.+|+++++++.| ||||+
T Consensus 53 p~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~ 132 (353)
T 4ase_A 53 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 132 (353)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence 3455566667789999999999999999999853 24679999997653 3345679999999999965 89999
Q ss_pred EEeeeecC-CceEEEEEccCCCChhhhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEec
Q 041689 486 IISSCSNE-EFKELVLEHMPHGSLEKCLYSSN---------------CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549 (652)
Q Consensus 486 ~~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~ 549 (652)
++|+|... +..++|||||++|+|.++++... ..+++.++..|+.|||+||+|||++ +||||
T Consensus 133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHR 209 (353)
T 4ase_A 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 209 (353)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecC
Confidence 99998664 57899999999999999997532 2588999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc
Q 041689 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV 628 (652)
Q Consensus 550 dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~ 628 (652)
||||+|||+++++.+||+|||+|+.+.............||+.|||||++.++.|+.++|||||||++|||+| |+.||.
T Consensus 210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~ 289 (353)
T 4ase_A 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 289 (353)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred ccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999987644433334455679999999999999999999999999999999998 899854
Q ss_pred h-------------------------hhhhhhcccchhhhccccCccCC
Q 041689 629 S-------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ~-------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
. .+.+++.+||+.||++||||+||
T Consensus 290 ~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~ei 338 (353)
T 4ase_A 290 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 338 (353)
T ss_dssp TCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHH
Confidence 3 37899999999999999999875
No 14
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5.8e-50 Score=405.48 Aligned_cols=222 Identities=20% Similarity=0.337 Sum_probs=180.4
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCC--------
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEE-------- 494 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 494 (652)
.+|++.+.||+|+||+||+|++. +|+.||||+++... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46899999999999999999865 69999999997543 334567899999999999999999999986543
Q ss_pred ----ceEEEEEccCCCChhhhhhcCCC--CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEec
Q 041689 495 ----FKELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSD 568 (652)
Q Consensus 495 ----~~~lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~D 568 (652)
+.|+|||||++|+|.+++..... ..++..+..|+.|++.||+|||++ ||+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence 36899999999999999986543 345667889999999999999999 999999999999999999999999
Q ss_pred ccCCccccCCCCc----------cccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch---------
Q 041689 569 FGITKLLIGEDQS----------MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS--------- 629 (652)
Q Consensus 569 fg~~~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~--------- 629 (652)
||+|+.+...... ...+..+||+.|||||++.+..|+.++||||+||++|||++ ||..
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~ 238 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT 238 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHH
Confidence 9999876432211 11234579999999999999999999999999999999997 4322
Q ss_pred ----------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ----------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ----------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
...+++.+||+.||++|||++||
T Consensus 239 ~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei 277 (299)
T 4g31_A 239 DVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINI 277 (299)
T ss_dssp HHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 25679999999999999999874
No 15
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7.8e-50 Score=406.64 Aligned_cols=224 Identities=23% Similarity=0.314 Sum_probs=183.0
Q ss_pred cCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCC----ceEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEE----FKELVL 500 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 500 (652)
.+|...+.||+|+||+||+|++ +|+.||||+++.... .....+.|+..+.+++|||||++++++.+++ ..|+||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 3577889999999999999998 689999999975432 2223445666667889999999999997654 579999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcC-----CCCCeEecCCCCCCeeeCCCCcEEEecccCCccc
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFN-----FLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL 575 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 575 (652)
|||++|+|.+++... .+++.++.+++.|++.||+|||++ +.++|+||||||+|||+++++++||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999999875 489999999999999999999976 2458999999999999999999999999999876
Q ss_pred cCCCCcc--ccccccCCccccCccccccC------ccCcccchhhHHHHHHHHHhCCCCcc-------------------
Q 041689 576 IGEDQSM--TQTQTLATIGYIAPEYGREG------RVFANGDVYSFGIMLMEIHSAKQQCV------------------- 628 (652)
Q Consensus 576 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~vl~elltg~~p~~------------------- 628 (652)
....... .....+||+.|||||++.+. .++.++|||||||++|||+||++|+.
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 4333221 22345799999999998654 47889999999999999999965421
Q ss_pred --------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 --------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 --------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++||||+||
T Consensus 239 ~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei 288 (303)
T 3hmm_A 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 288 (303)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHH
T ss_pred HHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHH
Confidence 125689999999999999999875
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.4e-48 Score=405.38 Aligned_cols=223 Identities=25% Similarity=0.270 Sum_probs=191.1
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeec------CCc
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSN------EEF 495 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~ 495 (652)
++|++.+.||+|+||+||+|++. +|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999865 69999999996542 2345678899999999999999999998753 367
Q ss_pred eEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccc
Q 041689 496 KELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL 575 (652)
Q Consensus 496 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 575 (652)
.|+|||||+ |+|.+++...+ .+++.++..|+.||+.||+|||++ ||+||||||+|||++.++.+||+|||+|+.+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999996 68999987655 799999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCC--CccccccccCCccccCccccccC-ccCcccchhhHHHHHHHHHhCCCCcc------------------------
Q 041689 576 IGED--QSMTQTQTLATIGYIAPEYGREG-RVFANGDVYSFGIMLMEIHSAKQQCV------------------------ 628 (652)
Q Consensus 576 ~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~------------------------ 628 (652)
.... ........+||+.|||||++.+. .++.++||||+||++|||++|++||.
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~ 288 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence 3321 12233456899999999998775 56899999999999999999999974
Q ss_pred ------------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ------------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ------------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||..||++|||++|+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~ 342 (398)
T 4b99_A 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAA 342 (398)
T ss_dssp -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHH
Confidence 235689999999999999999864
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.8e-47 Score=397.74 Aligned_cols=199 Identities=19% Similarity=0.258 Sum_probs=170.1
Q ss_pred HHHHhcCCCccceeccccceEEEEEEeC----CCcEEEEEEeecccchhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCC
Q 041689 420 VCRATYGFNENNLIGKGGFGTIYKSRIG----DGMEVAVKVFHLQCGRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEE 494 (652)
Q Consensus 420 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 494 (652)
+..-.++|++.+.||+|+||+||+|+.+ +++.||+|++.... ...++.+|+++++.+ +|||||++++++.+.+
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~ 93 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND 93 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence 3445678999999999999999999752 47789999986543 345678899999998 6999999999999999
Q ss_pred ceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCC-CcEEEecccCCc
Q 041689 495 FKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDT-MVAHLSDFGITK 573 (652)
Q Consensus 495 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~-~~~kl~Dfg~~~ 573 (652)
+.|+||||+++|+|.+++. .+++.++..++.|++.||+|||++ ||+||||||+|||++.+ +.+||+|||+|+
T Consensus 94 ~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 94 HVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166 (361)
T ss_dssp EEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence 9999999999999999884 489999999999999999999999 99999999999999876 799999999998
Q ss_pred cccCCCCc--------------------------cccccccCCccccCccccccC-ccCcccchhhHHHHHHHHHhCCCC
Q 041689 574 LLIGEDQS--------------------------MTQTQTLATIGYIAPEYGREG-RVFANGDVYSFGIMLMEIHSAKQQ 626 (652)
Q Consensus 574 ~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p 626 (652)
........ ......+||+.|||||++.+. .|+.++||||+||++|||++|+.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P 246 (361)
T 4f9c_A 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246 (361)
T ss_dssp ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence 65322110 112345799999999998775 488999999999999999999999
Q ss_pred c
Q 041689 627 C 627 (652)
Q Consensus 627 ~ 627 (652)
|
T Consensus 247 f 247 (361)
T 4f9c_A 247 F 247 (361)
T ss_dssp S
T ss_pred C
Confidence 8
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.6e-46 Score=414.07 Aligned_cols=222 Identities=19% Similarity=0.231 Sum_probs=200.8
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEcc
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHM 503 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 503 (652)
++|++.+.||+|+||.||+|+.+ +|+.||+|++........+.+.+|+++|++++|||||+++++|.+++..|+|||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 57999999999999999999865 69999999998765566678899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCC--CcEEEecccCCccccCCCCc
Q 041689 504 PHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDT--MVAHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~--~~~kl~Dfg~~~~~~~~~~~ 581 (652)
+||+|.+++......+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+.. .
T Consensus 237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~---~ 310 (573)
T 3uto_A 237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP---K 310 (573)
T ss_dssp CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT---T
T ss_pred CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccC---C
Confidence 99999999987666899999999999999999999999 99999999999999854 8999999999997632 2
Q ss_pred cccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch---------------------------hhhhh
Q 041689 582 MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS---------------------------FVFNL 634 (652)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~---------------------------~l~~l 634 (652)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||.. .+.+|
T Consensus 311 ~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dl 390 (573)
T 3uto_A 311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF 390 (573)
T ss_dssp SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHH
T ss_pred CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHH
Confidence 333456799999999999999999999999999999999999999643 26889
Q ss_pred hcccchhhhccccCccCC
Q 041689 635 AMECTIESLELRINAKEI 652 (652)
Q Consensus 635 ~~~~l~~~p~~Rpt~~ei 652 (652)
+.+||..||++|||++|+
T Consensus 391 i~~~L~~dp~~R~t~~e~ 408 (573)
T 3uto_A 391 IRKLLLADPNTRMTIHQA 408 (573)
T ss_dssp HHTTSCSSGGGSCCHHHH
T ss_pred HHHHccCChhHCcCHHHH
Confidence 999999999999998764
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.5e-46 Score=410.80 Aligned_cols=217 Identities=21% Similarity=0.278 Sum_probs=189.2
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHH---HHHHHHhcCCCeeeeEEeeeecCCceE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDI---ECEIMKSIHYRNLVKIISSCSNEEFKE 497 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~niv~~~~~~~~~~~~~ 497 (652)
++|++.+.||+|+||+||+|+.. +|+.||||++++.. ........+ ++.+++.++|||||+++++|.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 57999999999999999999865 69999999997542 112223333 456667789999999999999999999
Q ss_pred EEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccC
Q 041689 498 LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 577 (652)
+|||||+||+|.+++...+ .+++..+..|+.||+.||+|||++ |||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 269 lVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 9999999999999998765 799999999999999999999999 999999999999999999999999999987632
Q ss_pred CCCccccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCCcch--------------------------h
Q 041689 578 EDQSMTQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQCVS--------------------------F 630 (652)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~--------------------------~ 630 (652)
. .....+||+.|||||++.. ..|+.++||||+||++|||++|+.||.. .
T Consensus 345 ~----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~ 420 (689)
T 3v5w_A 345 K----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPE 420 (689)
T ss_dssp C----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHH
T ss_pred C----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCCHH
Confidence 2 2345689999999999865 5799999999999999999999999743 2
Q ss_pred hhhhhcccchhhhccccCc
Q 041689 631 VFNLAMECTIESLELRINA 649 (652)
Q Consensus 631 l~~l~~~~l~~~p~~Rpt~ 649 (652)
+++++.+||..||++|++.
T Consensus 421 a~dLI~~lL~~dP~~Rl~~ 439 (689)
T 3v5w_A 421 LRSLLEGLLQRDVNRRLGC 439 (689)
T ss_dssp HHHHHHHHTCSCGGGCTTC
T ss_pred HHHHHHHHccCCHhHCCCC
Confidence 7899999999999999984
No 20
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.2e-45 Score=420.53 Aligned_cols=352 Identities=36% Similarity=0.532 Sum_probs=309.5
Q ss_pred eeeceeEeccCCCcCCccCCCC-C-CCCCCCEEECCCCcCcccCCccccCCC-CCCEEEcCCCcCeeccCC---------
Q 041689 4 ISIGKLELNVDDIESPCEIPSE-I-NPHNLEELLLGQNNLVGVVPAAIFDVS-TLKDLALQDNYLSGSLSS--------- 71 (652)
Q Consensus 4 ~~l~~l~l~~~~~~~~~~ip~~-~-~~~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~--------- 71 (652)
++|+.|+|+.|.+. +++|.. + ++++|++|+|++|++++..|..+..++ +|++|+|++|++++..+.
T Consensus 318 ~~L~~L~L~~n~l~--~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 395 (768)
T 3rgz_A 318 SLLESLALSSNNFS--GELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNT 395 (768)
T ss_dssp TTCCEEECCSSEEE--EECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCC
T ss_pred CCccEEECCCCccc--CcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCC
Confidence 46888888888876 367765 4 788999999999999888898888887 899999999998865443
Q ss_pred CccccccCCCCCcccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEe
Q 041689 72 IADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYL 151 (652)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 151 (652)
+....+..+......+..+.++++|++|+|++|++++..|. .++.+++ |+.|++++|++++.+|..|..+++|++|+|
T Consensus 396 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~-L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 473 (768)
T 3rgz_A 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPS-SLGSLSK-LRDLKLWLNMLEGEIPQELMYVKTLETLIL 473 (768)
T ss_dssp CCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCG-GGGGCTT-CCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred ccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccH-HHhcCCC-CCEEECCCCcccCcCCHHHcCCCCceEEEe
Confidence 22222333222223445688999999999999999988887 7888886 999999999999999999999999999999
Q ss_pred cCccccccCCccccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC--CC
Q 041689 152 GGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND--GP 229 (652)
Q Consensus 152 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~--~~ 229 (652)
++|++++..|..|.++++|++|+|++|++++.+|..+..+++|++|+|++|++++.+|..+..+++|+.|++++|. +.
T Consensus 474 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 553 (768)
T 3rgz_A 474 DFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGT 553 (768)
T ss_dssp CSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESB
T ss_pred cCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999995 45
Q ss_pred CCcc----------------------------------------------------------------------cCCCCc
Q 041689 230 LPLE----------------------------------------------------------------------IGNLKV 239 (652)
Q Consensus 230 ~~~~----------------------------------------------------------------------~~~l~~ 239 (652)
+|.. ++.+++
T Consensus 554 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~ 633 (768)
T 3rgz_A 554 IPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGS 633 (768)
T ss_dssp CCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBC
T ss_pred CChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhcccc
Confidence 5543 445678
Q ss_pred cceEecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeec
Q 041689 240 LIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSF 319 (652)
Q Consensus 240 L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 319 (652)
|+.|||++|++++.+|..|+++++|+.|+|++|+++|.+|..|+.+++|+.|||++|+++|.+|..+..++.|++||+++
T Consensus 634 L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~ 713 (768)
T 3rgz_A 634 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 713 (768)
T ss_dssp CCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCS
T ss_pred ccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCcccCCCCCCCCCcccccccCCccCCCCCCCCCCCCCCccc
Q 041689 320 NKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPCKTSIH 362 (652)
Q Consensus 320 N~l~~~~p~~~~~~~l~~~~~~~N~~~c~~~~~~~~~~~~~~~ 362 (652)
|+++|.+|..+.+..+....+.||+..||.|. .+|....+
T Consensus 714 N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l---~~C~~~~~ 753 (768)
T 3rgz_A 714 NNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL---PRCDPSNA 753 (768)
T ss_dssp SEEEEECCSSSSGGGSCGGGGCSCTEEESTTS---CCCCSCC-
T ss_pred CcccccCCCchhhccCCHHHhcCCchhcCCCC---cCCCCCcc
Confidence 99999999999999999999999999999874 37865543
No 21
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=9.4e-44 Score=362.56 Aligned_cols=222 Identities=26% Similarity=0.341 Sum_probs=199.5
Q ss_pred hcCCCccceeccccceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 502 (652)
..+|++.+.||+|+||.||+|+. .+++.||+|++........+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46799999999999999999986 46899999999876555667889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCcc
Q 041689 503 MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSM 582 (652)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 582 (652)
+++|+|.+++... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++...... ..
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 171 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QS 171 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCST--TC
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCc--cc
Confidence 9999999999765 489999999999999999999999 9999999999999999999999999999865322 22
Q ss_pred ccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch--------------------------hhhhhhc
Q 041689 583 TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS--------------------------FVFNLAM 636 (652)
Q Consensus 583 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~--------------------------~l~~l~~ 636 (652)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.. .+.+++.
T Consensus 172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 251 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 251 (297)
T ss_dssp CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHH
T ss_pred ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHH
Confidence 23455799999999999999999999999999999999999999633 2688999
Q ss_pred ccchhhhccccCccCC
Q 041689 637 ECTIESLELRINAKEI 652 (652)
Q Consensus 637 ~~l~~~p~~Rpt~~ei 652 (652)
+||+.||++|||++|+
T Consensus 252 ~~l~~dp~~Rps~~el 267 (297)
T 3fxz_A 252 RCLEMDVEKRGSAKEL 267 (297)
T ss_dssp HHSCSSTTTSCCHHHH
T ss_pred HHccCChhHCcCHHHH
Confidence 9999999999999864
No 22
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.8e-43 Score=364.91 Aligned_cols=223 Identities=23% Similarity=0.281 Sum_probs=198.2
Q ss_pred HhcCCCccceeccccceEEEEEEe-CCCcEEEEEEeecc--cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
...+|++.+.||+|+||.||+|++ .+|+.||||++... .....+.+.+|++++++++||||+++++++...+..|+|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 346799999999999999999987 47999999999754 233456788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|||+++|+|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 93 ~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~-- 166 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-- 166 (328)
T ss_dssp ECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS--
T ss_pred EECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC--
Confidence 99999999999987654 689999999999999999999999 999999999999999999999999999986532
Q ss_pred CccccccccCCccccCccccccCccC-cccchhhHHHHHHHHHhCCCCcc-----------------------hhhhhhh
Q 041689 580 QSMTQTQTLATIGYIAPEYGREGRVF-ANGDVYSFGIMLMEIHSAKQQCV-----------------------SFVFNLA 635 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslG~vl~elltg~~p~~-----------------------~~l~~l~ 635 (652)
.......+||+.|+|||++.+..++ .++||||+||++|||++|+.||+ ..+.+++
T Consensus 167 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li 245 (328)
T 3fe3_A 167 -GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 245 (328)
T ss_dssp -SCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred -CCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 2234456799999999999888775 78999999999999999999974 3478999
Q ss_pred cccchhhhccccCccCC
Q 041689 636 MECTIESLELRINAKEI 652 (652)
Q Consensus 636 ~~~l~~~p~~Rpt~~ei 652 (652)
.+||..||++|||++||
T Consensus 246 ~~~L~~dP~~R~t~~ei 262 (328)
T 3fe3_A 246 KRFLVLNPIKRGTLEQI 262 (328)
T ss_dssp HHHCCSSTTTSCCHHHH
T ss_pred HHHCCCChhHCcCHHHH
Confidence 99999999999999874
No 23
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.2e-43 Score=367.07 Aligned_cols=242 Identities=33% Similarity=0.507 Sum_probs=212.5
Q ss_pred CccccccHHHHHHHhcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccc-hhhhhHHHHHHHHHhcCCCeeeeEEe
Q 041689 410 ATWRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVKIIS 488 (652)
Q Consensus 410 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~ 488 (652)
....+++..++....++|++.+.||+|+||.||+|+..+|+.||||++..... .....+.+|++++++++||||+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 34567899999999999999999999999999999988899999999975532 23347899999999999999999999
Q ss_pred eeecCCceEEEEEccCCCChhhhhhcCCC---CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEE
Q 041689 489 SCSNEEFKELVLEHMPHGSLEKCLYSSNC---ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAH 565 (652)
Q Consensus 489 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~k 565 (652)
++...+..++||||+++|+|.+++..... .+++..+..++.|++.||+|||+++.+||+||||||+||++++++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 99999999999999999999999976542 489999999999999999999998777999999999999999999999
Q ss_pred EecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc-----------------
Q 041689 566 LSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV----------------- 628 (652)
Q Consensus 566 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~----------------- 628 (652)
|+|||+++..... .........||+.|+|||++.+..++.++||||+||++|||++|+.||+
T Consensus 175 l~Dfg~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 175 VGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp ECCCSSCEECCSS-SSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred eccCccccccCcc-cccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 9999999865322 2223344569999999999988999999999999999999999999985
Q ss_pred -------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 -------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 -------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++||
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el 302 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHH
T ss_pred HHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHH
Confidence 347789999999999999999874
No 24
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.1e-43 Score=366.40 Aligned_cols=236 Identities=35% Similarity=0.541 Sum_probs=205.8
Q ss_pred cccHHHHHHHhcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecC
Q 041689 414 RFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNE 493 (652)
Q Consensus 414 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 493 (652)
+++..++...+++|+..+.||+|+||.||+|++.+++.||||++........+.+.+|++++++++||||+++++++...
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 34445566678899999999999999999999888999999998876666678899999999999999999999999999
Q ss_pred CceEEEEEccCCCChhhhhhcCC---CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEeccc
Q 041689 494 EFKELVLEHMPHGSLEKCLYSSN---CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFG 570 (652)
Q Consensus 494 ~~~~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg 570 (652)
+..++||||+++|+|.+++.... ..+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecc
Confidence 99999999999999999987553 2589999999999999999999999 99999999999999999999999999
Q ss_pred CCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch---------------------
Q 041689 571 ITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS--------------------- 629 (652)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~--------------------- 629 (652)
+++...............||+.|+|||++.++.++.++|||||||++|||++|+.||..
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence 99865332222233445689999999999989999999999999999999999988632
Q ss_pred -------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 -------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 306 (321)
T 2qkw_B 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306 (321)
T ss_dssp CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHH
Confidence 15578889999999999999874
No 25
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-43 Score=366.48 Aligned_cols=224 Identities=23% Similarity=0.308 Sum_probs=189.3
Q ss_pred hcCCCccceeccccceEEEEEEe-CCCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 501 (652)
.++|++.+.||+|+||.||+|++ .+|+.||||++.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 46799999999999999999986 479999999997553 2345678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCc
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 581 (652)
|+++|+|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||++++++.+||+|||++...... ..
T Consensus 89 ~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~-~~ 163 (347)
T 3zgw_A 89 YCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN-KD 163 (347)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCC-CC
Confidence 999999999987655 699999999999999999999999 9999999999999999999999999998765322 12
Q ss_pred cccccccCCccccCccccccCcc-CcccchhhHHHHHHHHHhCCCCcch-----------------------hhhhhhcc
Q 041689 582 MTQTQTLATIGYIAPEYGREGRV-FANGDVYSFGIMLMEIHSAKQQCVS-----------------------FVFNLAME 637 (652)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~p~~~-----------------------~l~~l~~~ 637 (652)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.. .+.+++.+
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~ 243 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQ 243 (347)
T ss_dssp --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHHH
T ss_pred ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 22344579999999999988775 8899999999999999999999654 36789999
Q ss_pred cchhhhccccCccCC
Q 041689 638 CTIESLELRINAKEI 652 (652)
Q Consensus 638 ~l~~~p~~Rpt~~ei 652 (652)
||+.||++|||++||
T Consensus 244 ~L~~dP~~Rps~~ei 258 (347)
T 3zgw_A 244 MLQVDPKKRISMKNL 258 (347)
T ss_dssp HTCSSGGGSCCHHHH
T ss_pred HcccCHhHCcCHHHH
Confidence 999999999999874
No 26
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.5e-43 Score=358.87 Aligned_cols=226 Identities=23% Similarity=0.332 Sum_probs=199.3
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 502 (652)
.++|.+.+.||+|+||.||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 357889999999999999999875 6899999998766666778899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCcc
Q 041689 503 MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSM 582 (652)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 582 (652)
+++|+|.+++......+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 999999999988666899999999999999999999999 99999999999999999999999999998753322111
Q ss_pred ------------ccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc----------------------
Q 041689 583 ------------TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV---------------------- 628 (652)
Q Consensus 583 ------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~---------------------- 628 (652)
......||+.|+|||++.+..++.++|||||||++|||++|..|+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCP 245 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCC
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCC
Confidence 1114569999999999999999999999999999999999988753
Q ss_pred ----hhhhhhhcccchhhhccccCccCC
Q 041689 629 ----SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ----~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++||
T Consensus 246 ~~~~~~l~~li~~~l~~dP~~Rps~~~l 273 (310)
T 3s95_A 246 PNCPPSFFPITVRCCDLDPEKRPSFVKL 273 (310)
T ss_dssp TTCCTTHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 347889999999999999999864
No 27
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1e-42 Score=358.89 Aligned_cols=233 Identities=23% Similarity=0.267 Sum_probs=205.4
Q ss_pred ccccHHHHHHHhcC----------CCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCC
Q 041689 413 RRFSYLEVCRATYG----------FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYR 481 (652)
Q Consensus 413 ~~~~~~~~~~~~~~----------y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 481 (652)
..++.+++..+++. |...+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45788888877764 677789999999999999976 6999999999876656667889999999999999
Q ss_pred eeeeEEeeeecCCceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCC
Q 041689 482 NLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDT 561 (652)
Q Consensus 482 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~ 561 (652)
||+++++++...+..++||||+++++|.+++... .+++..+..++.|++.||+|||+. ||+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCC
Confidence 9999999999999999999999999999988754 589999999999999999999999 99999999999999999
Q ss_pred CcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc-------------
Q 041689 562 MVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV------------- 628 (652)
Q Consensus 562 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~------------- 628 (652)
+.+||+|||++...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 178 ~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 255 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKD--VPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD 255 (321)
T ss_dssp CCEEECCCTTCEECCSS--SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred CcEEEeeeeeeeecccC--ccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 99999999999865322 122344579999999999999999999999999999999999999863
Q ss_pred -------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 -------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 -------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++||
T Consensus 256 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 292 (321)
T 2c30_A 256 SPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQEL 292 (321)
T ss_dssp SSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred CCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 236889999999999999999864
No 28
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-42 Score=358.41 Aligned_cols=222 Identities=17% Similarity=0.251 Sum_probs=198.0
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 502 (652)
.++|++.+.||+|+||.||+|+.. +++.||+|+++.. ......+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 467999999999999999999875 5889999998754 33456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCC--CCcEEEecccCCccccCCCC
Q 041689 503 MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDD--TMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~--~~~~kl~Dfg~~~~~~~~~~ 580 (652)
+++|+|.+++......+++.++..++.|++.||+|||++ ||+||||||+||+++. ++.+||+|||+++....
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~--- 156 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP--- 156 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT---
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC---
Confidence 999999999987666799999999999999999999999 9999999999999987 78999999999987632
Q ss_pred ccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc---------------------------hhhhh
Q 041689 581 SMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV---------------------------SFVFN 633 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~---------------------------~~l~~ 633 (652)
........||+.|+|||++.+..++.++||||+||++|||++|+.||. ..+.+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 236 (321)
T 1tki_A 157 GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236 (321)
T ss_dssp TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHH
T ss_pred CCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHH
Confidence 222344568999999999998889999999999999999999999963 23678
Q ss_pred hhcccchhhhccccCccCC
Q 041689 634 LAMECTIESLELRINAKEI 652 (652)
Q Consensus 634 l~~~~l~~~p~~Rpt~~ei 652 (652)
++.+||..||++|||++|+
T Consensus 237 li~~~L~~dp~~Rpt~~e~ 255 (321)
T 1tki_A 237 FVDRLLVKERKSRMTASEA 255 (321)
T ss_dssp HHHTTSCSSGGGSCCHHHH
T ss_pred HHHHHcCCChhHCcCHHHH
Confidence 9999999999999999864
No 29
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.7e-42 Score=361.95 Aligned_cols=222 Identities=21% Similarity=0.314 Sum_probs=196.8
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccch------hhhhHHHHHHHHHhcCCCeeeeEEeeeecCCce
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGR------AFKSFDIECEIMKSIHYRNLVKIISSCSNEEFK 496 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 496 (652)
.++|.+.+.||+|+||.||+|+.. +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 457999999999999999999875 6899999999765321 346789999999999999999999999999999
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCC----cEEEecccCC
Q 041689 497 ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM----VAHLSDFGIT 572 (652)
Q Consensus 497 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~----~~kl~Dfg~~ 572 (652)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||++++++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 99999999999999997654 799999999999999999999999 999999999999998776 7999999999
Q ss_pred ccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch-----------------------
Q 041689 573 KLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS----------------------- 629 (652)
Q Consensus 573 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~----------------------- 629 (652)
+..... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..
T Consensus 167 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 243 (361)
T 2yab_A 167 HEIEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243 (361)
T ss_dssp EECCTT---CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHT
T ss_pred eEcCCC---CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhcc
Confidence 876322 223445799999999999999999999999999999999999999632
Q ss_pred ----hhhhhhcccchhhhccccCccCC
Q 041689 630 ----FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ----~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||..||++|||++|+
T Consensus 244 ~~s~~~~~li~~~L~~dP~~R~t~~e~ 270 (361)
T 2yab_A 244 QTSELAKDFIRKLLVKETRKRLTIQEA 270 (361)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred CCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 26789999999999999999864
No 30
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.2e-42 Score=356.87 Aligned_cols=223 Identities=23% Similarity=0.309 Sum_probs=193.1
Q ss_pred hcCCCccceeccccceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 501 (652)
.++|++.+.||+|+||.||+|++.+|+.||+|+++... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 36799999999999999999999889999999997542 2234678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCc
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 581 (652)
|+++ ++.+++......+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++..... .
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~--~ 173 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP--V 173 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC--C
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC--c
Confidence 9985 88888877766799999999999999999999999 9999999999999999999999999999865321 2
Q ss_pred cccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCCcch-------------------------------
Q 041689 582 MTQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQCVS------------------------------- 629 (652)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~------------------------------- 629 (652)
.......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence 22344568999999999876 5689999999999999999999999742
Q ss_pred ----------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ----------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ----------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 298 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDA 298 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 35689999999999999999874
No 31
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.4e-42 Score=359.31 Aligned_cols=218 Identities=21% Similarity=0.249 Sum_probs=193.7
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc---cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ---CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
.++|++.+.||+|+||.||+|+.. +|+.||+|+++.. .......+.+|++++++++||||+++++++.+.+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 357899999999999999999875 6899999999754 223456788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~-- 157 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS-- 157 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc--
Confidence 99999999999887654 689999999999999999999999 999999999999999999999999999985422
Q ss_pred CccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc-----------------------hhhhhhhc
Q 041689 580 QSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV-----------------------SFVFNLAM 636 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~-----------------------~~l~~l~~ 636 (652)
........+||+.|+|||++.+..++.++||||+||++|||++|+.||. ..+.+++.
T Consensus 158 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~ 237 (337)
T 1o6l_A 158 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLA 237 (337)
T ss_dssp TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 2223345679999999999999999999999999999999999999963 33688999
Q ss_pred ccchhhhcccc
Q 041689 637 ECTIESLELRI 647 (652)
Q Consensus 637 ~~l~~~p~~Rp 647 (652)
+||+.||++||
T Consensus 238 ~lL~~dP~~R~ 248 (337)
T 1o6l_A 238 GLLKKDPKQRL 248 (337)
T ss_dssp HHTCSSTTTST
T ss_pred HHhhcCHHHhc
Confidence 99999999999
No 32
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.2e-42 Score=365.40 Aligned_cols=226 Identities=22% Similarity=0.358 Sum_probs=196.4
Q ss_pred hcCCCccceeccccceEEEEEEe--------CCCcEEEEEEeeccc-chhhhhHHHHHHHHHhc-CCCeeeeEEeeeecC
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI--------GDGMEVAVKVFHLQC-GRAFKSFDIECEIMKSI-HYRNLVKIISSCSNE 493 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 493 (652)
.++|.+.+.||+|+||.||+|++ .++..||||+++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 36788999999999999999975 235679999997653 34456789999999999 899999999999999
Q ss_pred CceEEEEEccCCCChhhhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee
Q 041689 494 EFKELVLEHMPHGSLEKCLYSSN---------------CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL 558 (652)
Q Consensus 494 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll 558 (652)
+..|+||||+++|+|.+++.... ..+++.++..++.|++.||+|||++ ||+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 99999999999999999997653 2478899999999999999999999 99999999999999
Q ss_pred CCCCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch--------
Q 041689 559 DDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS-------- 629 (652)
Q Consensus 559 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~-------- 629 (652)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~ 316 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 9999999999999987643333233344557889999999999999999999999999999999 8888543
Q ss_pred ----------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ----------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ----------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||..||++|||++||
T Consensus 317 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~el 355 (370)
T 2psq_A 317 LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 355 (370)
T ss_dssp HHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 47889999999999999999874
No 33
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=8.4e-43 Score=363.39 Aligned_cols=221 Identities=24% Similarity=0.270 Sum_probs=191.0
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc---cchhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCceE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ---CGRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEFKE 497 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 497 (652)
..++|++.+.||+|+||.||+|+.. +|+.||+|+++.. .....+.+.+|.++++.+ +||||+++++++.+.+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3468999999999999999999865 5899999999754 223445678899999988 7999999999999999999
Q ss_pred EEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccC
Q 041689 498 LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 577 (652)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 101 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~- 175 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI- 175 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC-
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecc-
Confidence 9999999999999987654 699999999999999999999999 99999999999999999999999999998532
Q ss_pred CCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch-----------------------hhhhh
Q 041689 578 EDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS-----------------------FVFNL 634 (652)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~-----------------------~l~~l 634 (652)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||.. .+.++
T Consensus 176 -~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~l 254 (353)
T 3txo_A 176 -CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGI 254 (353)
T ss_dssp -C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred -cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 122334456799999999999999999999999999999999999999643 37889
Q ss_pred hcccchhhhccccCc
Q 041689 635 AMECTIESLELRINA 649 (652)
Q Consensus 635 ~~~~l~~~p~~Rpt~ 649 (652)
+.+||+.||++||++
T Consensus 255 i~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 255 LKSFMTKNPTMRLGS 269 (353)
T ss_dssp HHHHTCSSGGGSTTS
T ss_pred HHHHhhhCHHHccCC
Confidence 999999999999998
No 34
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=8.4e-43 Score=359.77 Aligned_cols=225 Identities=22% Similarity=0.276 Sum_probs=195.3
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 501 (652)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999876 68999999997543 2334678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCc
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 581 (652)
|+++|+|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.+......
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999999987654 689999999999999999999999 9999999999999999999999999999865433333
Q ss_pred cccccccCCccccCccccccCcc-CcccchhhHHHHHHHHHhCCCCcch--------------------------hhhhh
Q 041689 582 MTQTQTLATIGYIAPEYGREGRV-FANGDVYSFGIMLMEIHSAKQQCVS--------------------------FVFNL 634 (652)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~p~~~--------------------------~l~~l 634 (652)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.. .+.++
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHH
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHH
Confidence 33345679999999999987776 7789999999999999999999643 25689
Q ss_pred hcccchhhhccccCccCC
Q 041689 635 AMECTIESLELRINAKEI 652 (652)
Q Consensus 635 ~~~~l~~~p~~Rpt~~ei 652 (652)
+.+||+.||++|||++||
T Consensus 242 i~~~L~~dP~~R~t~~ei 259 (323)
T 3tki_A 242 LHKILVENPSARITIPDI 259 (323)
T ss_dssp HHHHSCSSTTTSCCHHHH
T ss_pred HHHHccCChhhCcCHHHH
Confidence 999999999999999864
No 35
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.3e-42 Score=358.68 Aligned_cols=226 Identities=21% Similarity=0.278 Sum_probs=197.2
Q ss_pred HHHhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCc
Q 041689 421 CRATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEF 495 (652)
Q Consensus 421 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 495 (652)
....++|.+.+.||+|+||.||+|+.. +|+.||+|+++... ......+..|.++++.+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345678999999999999999999975 68999999997642 23445678899999887 89999999999999999
Q ss_pred eEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccc
Q 041689 496 KELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL 575 (652)
Q Consensus 496 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 575 (652)
.|+||||+++|+|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 999999999999999987654 689999999999999999999999 9999999999999999999999999999854
Q ss_pred cCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc-----------------------hhhh
Q 041689 576 IGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV-----------------------SFVF 632 (652)
Q Consensus 576 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~-----------------------~~l~ 632 (652)
.. ........+||+.|+|||++.+..++.++||||+||++|||++|+.||. ..+.
T Consensus 169 ~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~ 246 (345)
T 1xjd_A 169 ML--GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAK 246 (345)
T ss_dssp CC--TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred cc--CCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccCHHHH
Confidence 22 1222345679999999999999999999999999999999999999964 3378
Q ss_pred hhhcccchhhhccccCcc-CC
Q 041689 633 NLAMECTIESLELRINAK-EI 652 (652)
Q Consensus 633 ~l~~~~l~~~p~~Rpt~~-ei 652 (652)
+++.+||..||++||++. ||
T Consensus 247 ~li~~lL~~dp~~R~~~~~~i 267 (345)
T 1xjd_A 247 DLLVKLFVREPEKRLGVRGDI 267 (345)
T ss_dssp HHHHHHSCSSGGGSBTTBSCG
T ss_pred HHHHHHhcCCHhHcCCChHHH
Confidence 999999999999999987 54
No 36
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-42 Score=358.42 Aligned_cols=221 Identities=21% Similarity=0.284 Sum_probs=194.7
Q ss_pred hcCCCccceeccccceEEEEEEe-CCCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
.++|.+.+.||+|+||.||+|++ .+++.||+|++.... ......+.+|+++++.++||||+++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35799999999999999999996 478999999997542 22345788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|||+ +|++.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||++++++.+||+|||++.....
T Consensus 88 ~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~-- 160 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD-- 160 (336)
T ss_dssp ECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT--
T ss_pred EECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC--
Confidence 9999 679999887654 699999999999999999999999 999999999999999999999999999986532
Q ss_pred CccccccccCCccccCccccccCcc-CcccchhhHHHHHHHHHhCCCCcch-----------------------hhhhhh
Q 041689 580 QSMTQTQTLATIGYIAPEYGREGRV-FANGDVYSFGIMLMEIHSAKQQCVS-----------------------FVFNLA 635 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~p~~~-----------------------~l~~l~ 635 (652)
.......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||+. .+.+++
T Consensus 161 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li 239 (336)
T 3h4j_B 161 -GNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLI 239 (336)
T ss_dssp -SBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHHHH
T ss_pred -CcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence 222345579999999999988776 6899999999999999999999654 378999
Q ss_pred cccchhhhccccCccCC
Q 041689 636 MECTIESLELRINAKEI 652 (652)
Q Consensus 636 ~~~l~~~p~~Rpt~~ei 652 (652)
.+||+.||++|||++||
T Consensus 240 ~~~L~~dP~~Rpt~~ei 256 (336)
T 3h4j_B 240 RRMIVADPMQRITIQEI 256 (336)
T ss_dssp HTTSCSSGGGSCCHHHH
T ss_pred HHHcCCChhHCcCHHHH
Confidence 99999999999999874
No 37
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=9e-42 Score=392.79 Aligned_cols=343 Identities=32% Similarity=0.479 Sum_probs=270.0
Q ss_pred eeeceeEeccCCCcCCccCCCCC-C-CCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCC--------Cc
Q 041689 4 ISIGKLELNVDDIESPCEIPSEI-N-PHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSS--------IA 73 (652)
Q Consensus 4 ~~l~~l~l~~~~~~~~~~ip~~~-~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~--------~~ 73 (652)
++|+.|+|+.|.+. +.+|..+ + +++|++|+|++|++++..|..|.++++|++|+|++|++++..+. +.
T Consensus 269 ~~L~~L~L~~n~l~--~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~ 346 (768)
T 3rgz_A 269 KSLQYLSLAENKFT--GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLK 346 (768)
T ss_dssp TTCCEEECCSSEEE--ESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCC
T ss_pred CCCCEEECcCCccC--CccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCC
Confidence 35667777777665 2566665 3 36777777777777766777777777777777777766643331 11
Q ss_pred c-----ccccCCCCC--------------------cccccccCC--CCCCcEEEcccCCCcccCCccchhcccccCcEEE
Q 041689 74 D-----NYLTSSTPE--------------------LSFLSSLSN--CKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFD 126 (652)
Q Consensus 74 ~-----~~l~~~~~~--------------------~~~~~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~ 126 (652)
. +.+.+..+. ...+..+.. +++|++|+|++|++++..|. .+..+++ |++|+
T Consensus 347 ~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~-~l~~l~~-L~~L~ 424 (768)
T 3rgz_A 347 VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPP-TLSNCSE-LVSLH 424 (768)
T ss_dssp EEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCG-GGGGCTT-CCEEE
T ss_pred EEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCH-HHhcCCC-CCEEE
Confidence 1 111111110 011122223 66788888888888877776 6777776 99999
Q ss_pred ccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccc
Q 041689 127 MSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSG 206 (652)
Q Consensus 127 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 206 (652)
|++|++++.+|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++.+|..+..+++|++|+|++|++++
T Consensus 425 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 504 (768)
T 3rgz_A 425 LSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTG 504 (768)
T ss_dssp CCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCS
T ss_pred CcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCC
Confidence 99999998889999999999999999999998889899999999999999999998899999999999999999999998
Q ss_pred cccccCCCCCCCCEEEccCCC--CCCCcccCCCCccceEecccccCCccCcccc--------------------------
Q 041689 207 SILTCFSNLASLRTLSLSYND--GPLPLEIGNLKVLIGIDFSMNNFSSVIPTTI-------------------------- 258 (652)
Q Consensus 207 ~~~~~~~~l~~L~~L~Ls~N~--~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~-------------------------- 258 (652)
.+|.+|+.+++|++|+|++|. +.+|..++++++|+.|++++|++++.+|..+
T Consensus 505 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (768)
T 3rgz_A 505 EIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMK 584 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCC
T ss_pred cCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccc
Confidence 999999999999999999996 5788889999999999999998887666543
Q ss_pred --------------------------------------------cCCCCCcEEEccCCcCCCcccccccccccCcceecc
Q 041689 259 --------------------------------------------GSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFS 294 (652)
Q Consensus 259 --------------------------------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 294 (652)
..+++|+.|||++|+++|.+|..++.+++|+.|+|+
T Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls 664 (768)
T 3rgz_A 585 KECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLG 664 (768)
T ss_dssp TTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECC
T ss_pred ccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCc
Confidence 335678899999999999999999999999999999
Q ss_pred ccccCCCCchhhcCCCCCceEEeecCcCcccCCCC-CCCCCcccccccCCccCCCCC
Q 041689 295 NNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKG-GSFGNFSAESFEGNKLLCGSP 350 (652)
Q Consensus 295 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~~~l~~~~~~~N~~~c~~~ 350 (652)
+|+++|.+|..+.++++|+.|||++|+++|.+|.. ..+..++.+++++|++...-|
T Consensus 665 ~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 665 HNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp SSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECC
T ss_pred CCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCC
Confidence 99999999999999999999999999999988864 677888999999998754433
No 38
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.2e-43 Score=375.64 Aligned_cols=232 Identities=18% Similarity=0.222 Sum_probs=200.4
Q ss_pred HHHHHHHhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeec
Q 041689 417 YLEVCRATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSN 492 (652)
Q Consensus 417 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 492 (652)
..++....++|++.+.||+|+||.||+|+.. +++.||+|+++... ......+.+|+.+++.++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4455556789999999999999999999976 48889999997532 2233458899999999999999999999999
Q ss_pred CCceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCC
Q 041689 493 EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGIT 572 (652)
Q Consensus 493 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~ 572 (652)
++..|+||||+++|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 9999999999999999999987656799999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCccccccccCCccccCccccc-----cCccCcccchhhHHHHHHHHHhCCCCcc-------------------
Q 041689 573 KLLIGEDQSMTQTQTLATIGYIAPEYGR-----EGRVFANGDVYSFGIMLMEIHSAKQQCV------------------- 628 (652)
Q Consensus 573 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~------------------- 628 (652)
+..... ........+||+.|+|||++. .+.++.++|||||||++|||++|+.||.
T Consensus 223 ~~~~~~-~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~ 301 (437)
T 4aw2_A 223 LKLMED-GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ 301 (437)
T ss_dssp EECCTT-SCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC
T ss_pred hhcccC-CCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccccc
Confidence 865322 222234467999999999987 5678999999999999999999999953
Q ss_pred ---------hhhhhhhcccchhhhcc--ccCccCC
Q 041689 629 ---------SFVFNLAMECTIESLEL--RINAKEI 652 (652)
Q Consensus 629 ---------~~l~~l~~~~l~~~p~~--Rpt~~ei 652 (652)
..+.+++.+||..+|++ ||+++||
T Consensus 302 ~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~ei 336 (437)
T 4aw2_A 302 FPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDF 336 (437)
T ss_dssp CCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHH
T ss_pred CCcccccCCHHHHHHHHHHhcccccccCCCCHHHH
Confidence 23678999999988888 9998764
No 39
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.7e-42 Score=355.12 Aligned_cols=227 Identities=29% Similarity=0.407 Sum_probs=190.0
Q ss_pred HHHHhcCCCccceeccccceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceE
Q 041689 420 VCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKE 497 (652)
Q Consensus 420 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 497 (652)
+.....+|++.+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..+
T Consensus 32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 3p86_A 32 MDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110 (309)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCE
T ss_pred ccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceE
Confidence 334456789999999999999999987 68899999987543 334567889999999999999999999999999999
Q ss_pred EEEEccCCCChhhhhhcCCC--CCCHHHHHHHHHHHHHHHHHHHcCCCCC--eEecCCCCCCeeeCCCCcEEEecccCCc
Q 041689 498 LVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEYLHFNFLVP--VIHCDLKPSNVLLDDTMVAHLSDFGITK 573 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~dlkp~NIll~~~~~~kl~Dfg~~~ 573 (652)
+||||+++|+|.+++..... .+++..+..++.|++.||+|||++ + |+||||||+||+++.++.+||+|||+++
T Consensus 111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp EEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred EEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 99999999999999986542 389999999999999999999999 8 9999999999999999999999999997
Q ss_pred cccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch------------------------
Q 041689 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS------------------------ 629 (652)
Q Consensus 574 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~------------------------ 629 (652)
.... .........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 188 ~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (309)
T 3p86_A 188 LKAS--TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLN 265 (309)
T ss_dssp ----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSC
T ss_pred cccc--cccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCC
Confidence 5422 12223445689999999999999999999999999999999999999643
Q ss_pred -hhhhhhcccchhhhccccCccCC
Q 041689 630 -FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 266 ~~l~~li~~~l~~dP~~Rps~~~l 289 (309)
T 3p86_A 266 PQVAAIIEGCWTNEPWKRPSFATI 289 (309)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHHHHccCChhhCcCHHHH
Confidence 37889999999999999999864
No 40
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.6e-42 Score=362.80 Aligned_cols=220 Identities=21% Similarity=0.234 Sum_probs=193.9
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCceEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEFKEL 498 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 498 (652)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... ......+..|..+++++ +||||+++++++.+.+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 457999999999999999999875 58889999997652 23345678899999887 89999999999999999999
Q ss_pred EEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCC
Q 041689 499 VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE 578 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 578 (652)
||||+++|+|..++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 131 V~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~-- 204 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-- 204 (396)
T ss_dssp EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC--
T ss_pred EEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecc--
Confidence 999999999999887654 699999999999999999999999 99999999999999999999999999998532
Q ss_pred CCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc------------------------------
Q 041689 579 DQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV------------------------------ 628 (652)
Q Consensus 579 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~------------------------------ 628 (652)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 284 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc
Confidence 12233455679999999999999999999999999999999999999983
Q ss_pred --hhhhhhhcccchhhhccccCc
Q 041689 629 --SFVFNLAMECTIESLELRINA 649 (652)
Q Consensus 629 --~~l~~l~~~~l~~~p~~Rpt~ 649 (652)
..+.+++.+||+.||++||++
T Consensus 285 ~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 285 LSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred CCHHHHHHHHHHhcCCHhHcCCC
Confidence 126789999999999999997
No 41
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.8e-42 Score=354.67 Aligned_cols=221 Identities=20% Similarity=0.288 Sum_probs=195.5
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccch------hhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGR------AFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKE 497 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 497 (652)
++|.+.+.||+|+||.||+|+.. +|+.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45889999999999999999875 6899999999754321 3567899999999999999999999999999999
Q ss_pred EEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCC----cEEEecccCCc
Q 041689 498 LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM----VAHLSDFGITK 573 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~----~~kl~Dfg~~~ 573 (652)
+||||+++++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++
T Consensus 91 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 9999999999999987654 689999999999999999999999 999999999999999877 89999999998
Q ss_pred cccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch------------------------
Q 041689 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS------------------------ 629 (652)
Q Consensus 574 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~------------------------ 629 (652)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 167 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (326)
T 2y0a_A 167 KIDFG---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243 (326)
T ss_dssp ECCTT---SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTT
T ss_pred ECCCC---CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCcccccc
Confidence 75322 223345699999999999989999999999999999999999999632
Q ss_pred ---hhhhhhcccchhhhccccCccCC
Q 041689 630 ---FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ---~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||..||++|||++|+
T Consensus 244 ~~~~~~~li~~~L~~dP~~Rpt~~e~ 269 (326)
T 2y0a_A 244 TSALAKDFIRRLLVKDPKKRMTIQDS 269 (326)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHH
Confidence 26789999999999999999864
No 42
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8.3e-43 Score=359.91 Aligned_cols=225 Identities=23% Similarity=0.314 Sum_probs=192.0
Q ss_pred hcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCC----ceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEE----FKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv 499 (652)
..+|++.+.||+|+||.||+|++. ++.||||+++... ......+.|+.++++++||||+++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467899999999999999999875 7899999997553 33445667999999999999999999998754 36999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcC-------CCCCeEecCCCCCCeeeCCCCcEEEecccCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFN-------FLVPVIHCDLKPSNVLLDDTMVAHLSDFGIT 572 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-------~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~ 572 (652)
|||+++|+|.+++.... +++..+..++.|++.||+|||+. +.++|+||||||+||+++.++.+||+|||++
T Consensus 101 ~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp EECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 99999999999997754 89999999999999999999975 2348999999999999999999999999999
Q ss_pred ccccCCCCccccccccCCccccCcccccc-----CccCcccchhhHHHHHHHHHhCCCCcch------------------
Q 041689 573 KLLIGEDQSMTQTQTLATIGYIAPEYGRE-----GRVFANGDVYSFGIMLMEIHSAKQQCVS------------------ 629 (652)
Q Consensus 573 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~vl~elltg~~p~~~------------------ 629 (652)
+...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 87644333333344679999999999876 4567889999999999999999888642
Q ss_pred ----------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ----------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ----------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el 309 (322)
T 3soc_A 259 LEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCV 309 (322)
T ss_dssp HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred hhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHH
Confidence 17789999999999999999874
No 43
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=4.5e-42 Score=359.74 Aligned_cols=222 Identities=21% Similarity=0.342 Sum_probs=195.6
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999865 68999999997542 334567889999999999999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCC---CcEEEecccCCccccC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDT---MVAHLSDFGITKLLIG 577 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~---~~~kl~Dfg~~~~~~~ 577 (652)
||+++|+|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.+ +.+||+|||++.....
T Consensus 108 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 108 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 9999999999887654 689999999999999999999999 99999999999999864 4599999999986532
Q ss_pred CCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc---------------------------hh
Q 041689 578 EDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV---------------------------SF 630 (652)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~---------------------------~~ 630 (652)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||. ..
T Consensus 184 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 260 (362)
T 2bdw_A 184 S---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 260 (362)
T ss_dssp C---CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHH
T ss_pred C---cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHH
Confidence 2 22334579999999999999899999999999999999999999963 23
Q ss_pred hhhhhcccchhhhccccCccCC
Q 041689 631 VFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 631 l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+.+++.+||+.||++|||++|+
T Consensus 261 ~~~li~~~L~~dP~~R~t~~e~ 282 (362)
T 2bdw_A 261 AKSLIDSMLTVNPKKRITADQA 282 (362)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHH
Confidence 7889999999999999998763
No 44
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.7e-42 Score=351.76 Aligned_cols=222 Identities=23% Similarity=0.307 Sum_probs=190.6
Q ss_pred cCCCccceeccccceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEc
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 502 (652)
++|++.+.||+|+||.||+|+..+|+.||+|+++... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5789999999999999999999889999999996542 22346788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCcc
Q 041689 503 MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSM 582 (652)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 582 (652)
+++ +|.+++......+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++..... ..
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIP--VR 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcc--cc
Confidence 986 99998887666799999999999999999999999 9999999999999999999999999999865321 12
Q ss_pred ccccccCCccccCccccccC-ccCcccchhhHHHHHHHHHhCCCCcch--------------------------------
Q 041689 583 TQTQTLATIGYIAPEYGREG-RVFANGDVYSFGIMLMEIHSAKQQCVS-------------------------------- 629 (652)
Q Consensus 583 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~-------------------------------- 629 (652)
......+|+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccc
Confidence 23345689999999998764 589999999999999999999998742
Q ss_pred --------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 --------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 --------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 278 (288)
T 1ob3_A 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278 (288)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHH
Confidence 23489999999999999999874
No 45
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.8e-42 Score=356.28 Aligned_cols=226 Identities=24% Similarity=0.387 Sum_probs=194.7
Q ss_pred hcCCCccceeccccceEEEEEEeC----CCcEEEEEEeecc-cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG----DGMEVAVKVFHLQ-CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKEL 498 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 498 (652)
..+|.+.+.||+|+||.||+|++. .+..||||+++.. .....+.+.+|++++++++||||+++++++.+++..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 356888899999999999999874 3456999999765 33445678999999999999999999999999999999
Q ss_pred EEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCC
Q 041689 499 VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE 578 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 578 (652)
||||+++|+|.+++......+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 9999999999999987766899999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCc-cccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCc------------------------chhhh
Q 041689 579 DQS-MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQC------------------------VSFVF 632 (652)
Q Consensus 579 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~------------------------~~~l~ 632 (652)
... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.|| +..+.
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 284 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALH 284 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHHHH
Confidence 221 12223346788999999998999999999999999999999 99885 33478
Q ss_pred hhhcccchhhhccccCccCC
Q 041689 633 NLAMECTIESLELRINAKEI 652 (652)
Q Consensus 633 ~l~~~~l~~~p~~Rpt~~ei 652 (652)
+++.+||..||++|||++||
T Consensus 285 ~li~~~l~~dp~~Rps~~ei 304 (325)
T 3kul_A 285 QLMLDCWHKDRAQRPRFSQI 304 (325)
T ss_dssp HHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHccCChhhCcCHHHH
Confidence 89999999999999999874
No 46
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.5e-42 Score=345.64 Aligned_cols=224 Identities=26% Similarity=0.351 Sum_probs=198.4
Q ss_pred hcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEcc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHM 503 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 503 (652)
.++|++.+.||+|+||.||+|+..++..||+|+++.... ..+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 467899999999999999999998888999999976532 3467899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCccc
Q 041689 504 PHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMT 583 (652)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 583 (652)
++++|.+++......+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+...... ....
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~-~~~~ 161 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD-QYVS 161 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT-CEEE
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh-hhhc
Confidence 99999999987665799999999999999999999999 9999999999999999999999999999865322 1222
Q ss_pred cccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------hhhhhhhccc
Q 041689 584 QTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------SFVFNLAMEC 638 (652)
Q Consensus 584 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~~l~~l~~~~ 638 (652)
.....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||. +.+.+++.+|
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 241 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSC 241 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHT
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHHHHH
Confidence 234456788999999998899999999999999999999 998853 3478999999
Q ss_pred chhhhccccCccCC
Q 041689 639 TIESLELRINAKEI 652 (652)
Q Consensus 639 l~~~p~~Rpt~~ei 652 (652)
|+.||++|||++||
T Consensus 242 l~~~p~~Rps~~~l 255 (268)
T 3sxs_A 242 WHELPEKRPTFQQL 255 (268)
T ss_dssp TCSSGGGSCCHHHH
T ss_pred cCCChhhCcCHHHH
Confidence 99999999999864
No 47
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.8e-42 Score=347.97 Aligned_cols=224 Identities=27% Similarity=0.374 Sum_probs=197.7
Q ss_pred hcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEcc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHM 503 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 503 (652)
.++|++.+.||+|+||.||+|++.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 357889999999999999999998899999999975532 3467899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCccc
Q 041689 504 PHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMT 583 (652)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 583 (652)
++++|.+++......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~ 163 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTS 163 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH-HHHS
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc-cccc
Confidence 99999999987776799999999999999999999999 9999999999999999999999999999865221 1112
Q ss_pred cccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------hhhhhhhccc
Q 041689 584 QTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------SFVFNLAMEC 638 (652)
Q Consensus 584 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~~l~~l~~~~ 638 (652)
.....+++.|+|||++.+..++.++||||+|+++|||++ |+.||. ..+.+++.+|
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 243 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC 243 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHH
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHHHHH
Confidence 233456788999999998999999999999999999999 888853 3377899999
Q ss_pred chhhhccccCccCC
Q 041689 639 TIESLELRINAKEI 652 (652)
Q Consensus 639 l~~~p~~Rpt~~ei 652 (652)
|+.||++|||++|+
T Consensus 244 l~~~p~~Rps~~~l 257 (269)
T 4hcu_A 244 WRERPEDRPAFSRL 257 (269)
T ss_dssp TCSSGGGSCCHHHH
T ss_pred ccCCcccCcCHHHH
Confidence 99999999999864
No 48
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7.5e-42 Score=360.32 Aligned_cols=223 Identities=18% Similarity=0.241 Sum_probs=198.6
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 502 (652)
.++|++.+.||+|+||.||+|... +|+.||+|++..........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 357999999999999999999875 6899999999866555566889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeC--CCCcEEEecccCCccccCCCC
Q 041689 503 MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLD--DTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~--~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
+++|+|.+++......+++.++..++.|++.||+|||++ ||+||||||+||+++ ..+.+||+|||+++.....
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~-- 204 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD-- 204 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT--
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCC--
Confidence 999999999987666799999999999999999999999 999999999999997 4578999999999876322
Q ss_pred ccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch---------------------------hhhh
Q 041689 581 SMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS---------------------------FVFN 633 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~---------------------------~l~~ 633 (652)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.. .+.+
T Consensus 205 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 283 (387)
T 1kob_A 205 -EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 283 (387)
T ss_dssp -SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHH
T ss_pred -cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHH
Confidence 223345799999999999999999999999999999999999999632 3688
Q ss_pred hhcccchhhhccccCccCC
Q 041689 634 LAMECTIESLELRINAKEI 652 (652)
Q Consensus 634 l~~~~l~~~p~~Rpt~~ei 652 (652)
++.+||..||++|||++|+
T Consensus 284 li~~~L~~dP~~Rpt~~el 302 (387)
T 1kob_A 284 FIKNLLQKEPRKRLTVHDA 302 (387)
T ss_dssp HHHTTSCSSGGGSCCHHHH
T ss_pred HHHHHcCCChhHCcCHHHH
Confidence 9999999999999999864
No 49
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4.2e-42 Score=368.39 Aligned_cols=224 Identities=21% Similarity=0.271 Sum_probs=195.9
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
..++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..|+|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3567999999999999999999864 68999999997553 23456788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeC---CCCcEEEecccCCcccc
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLI 576 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~---~~~~~kl~Dfg~~~~~~ 576 (652)
|||+++|+|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++ +++.+||+|||+++...
T Consensus 89 ~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999999888765 699999999999999999999999 999999999999998 56889999999998653
Q ss_pred CCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCc---------------------------ch
Q 041689 577 GEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQC---------------------------VS 629 (652)
Q Consensus 577 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~---------------------------~~ 629 (652)
.. ........||+.|+|||++.+..++.++||||+||++|+|++|+.|| ++
T Consensus 165 ~~--~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 242 (444)
T 3soa_A 165 GE--QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTP 242 (444)
T ss_dssp TT--CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCH
T ss_pred CC--CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCH
Confidence 22 22234467999999999999999999999999999999999999995 23
Q ss_pred hhhhhhcccchhhhccccCccCC
Q 041689 630 FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 243 ~~~~li~~~L~~dP~~Rpta~e~ 265 (444)
T 3soa_A 243 EAKDLINKMLTINPSKRITAAEA 265 (444)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHH
T ss_pred HHHHHHHHHcCCChhHCCCHHHH
Confidence 47899999999999999999864
No 50
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=6.4e-42 Score=359.66 Aligned_cols=217 Identities=24% Similarity=0.281 Sum_probs=192.7
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
++|.+.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..|+||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56889999999999999999865 58899999997542 234567889999999999999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 95 e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~--- 167 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--- 167 (384)
T ss_dssp CCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT---
T ss_pred ecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC---
Confidence 9999999999988654 699999999999999999999999 999999999999999999999999999986532
Q ss_pred ccccccccCCccccCcccccc---CccCcccchhhHHHHHHHHHhCCCCcc--------------------------hhh
Q 041689 581 SMTQTQTLATIGYIAPEYGRE---GRVFANGDVYSFGIMLMEIHSAKQQCV--------------------------SFV 631 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~vl~elltg~~p~~--------------------------~~l 631 (652)
.......+||+.|+|||++.. ..++.++||||+||++|||++|+.||. ..+
T Consensus 168 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~ 247 (384)
T 4fr4_A 168 ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEM 247 (384)
T ss_dssp TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCCHHH
Confidence 223345679999999999864 458999999999999999999999974 236
Q ss_pred hhhhcccchhhhccccC
Q 041689 632 FNLAMECTIESLELRIN 648 (652)
Q Consensus 632 ~~l~~~~l~~~p~~Rpt 648 (652)
.+++.+||+.||++||+
T Consensus 248 ~~li~~lL~~dP~~R~s 264 (384)
T 4fr4_A 248 VSLLKKLLEPNPDQRFS 264 (384)
T ss_dssp HHHHHHHSCSSGGGSCC
T ss_pred HHHHHHHhcCCHhHhcc
Confidence 78999999999999998
No 51
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=6.1e-42 Score=348.47 Aligned_cols=222 Identities=23% Similarity=0.263 Sum_probs=192.5
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 501 (652)
++|++.+.||+|+||.||+|+.. +++.||+|+++... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57899999999999999999875 68999999997543 2334678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCc
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 581 (652)
|+++ ++.+++......+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.... ..
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~--~~ 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI--PV 155 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCS--CC
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCC--cc
Confidence 9986 66666666555799999999999999999999999 999999999999999999999999999986532 22
Q ss_pred cccccccCCccccCccccccCc-cCcccchhhHHHHHHHHHhCCCCc---------------------------------
Q 041689 582 MTQTQTLATIGYIAPEYGREGR-VFANGDVYSFGIMLMEIHSAKQQC--------------------------------- 627 (652)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~vl~elltg~~p~--------------------------------- 627 (652)
.......+|+.|+|||++.+.. ++.++||||+||++|||++|..|+
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 2334457899999999987765 799999999999999999988874
Q ss_pred --------------------chhhhhhhcccchhhhccccCccCC
Q 041689 628 --------------------VSFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 628 --------------------~~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+..+.+++.+||+.||++|||++|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 280 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHH
Confidence 2335689999999999999999874
No 52
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=9.6e-43 Score=367.37 Aligned_cols=227 Identities=27% Similarity=0.364 Sum_probs=196.1
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
..++|.+.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 3457889999999999999999976 68999999987543 234467889999999999999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
||+++|+|.+++......+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.......
T Consensus 192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 99999999999987665789999999999999999999999 999999999999999999999999999986422111
Q ss_pred ccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------hhhhhhh
Q 041689 581 SMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------SFVFNLA 635 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~~l~~l~ 635 (652)
........+++.|+|||++.++.++.++|||||||++|||++ |+.||. ..+.+++
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 348 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLM 348 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 111112235678999999998999999999999999999998 888853 3478999
Q ss_pred cccchhhhccccCccCC
Q 041689 636 MECTIESLELRINAKEI 652 (652)
Q Consensus 636 ~~~l~~~p~~Rpt~~ei 652 (652)
.+||+.||++|||++||
T Consensus 349 ~~cl~~dP~~Rps~~~i 365 (377)
T 3cbl_A 349 EQCWAYEPGQRPSFSTI 365 (377)
T ss_dssp HHHTCSSGGGSCCHHHH
T ss_pred HHHcCCCchhCcCHHHH
Confidence 99999999999999874
No 53
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.6e-42 Score=348.93 Aligned_cols=222 Identities=23% Similarity=0.346 Sum_probs=190.3
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc---cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ---CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
.++|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 357999999999999999999865 6899999998643 233456789999999999999999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|||+++++|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 164 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET- 164 (294)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccc-
Confidence 99999999999987655 689999999999999999999999 9999999999999999999999999999865322
Q ss_pred CccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch----------------------------hh
Q 041689 580 QSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS----------------------------FV 631 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~----------------------------~l 631 (652)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||.. .+
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 244 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSL 244 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHH
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHH
Confidence 11223345689999999999999999999999999999999999999642 37
Q ss_pred hhhhcccchhhhcccc-Ccc
Q 041689 632 FNLAMECTIESLELRI-NAK 650 (652)
Q Consensus 632 ~~l~~~~l~~~p~~Rp-t~~ 650 (652)
.+++.+||+.||++|| +++
T Consensus 245 ~~li~~~l~~dp~~R~~~~~ 264 (294)
T 4eqm_A 245 SNVILRATEKDKANRYKTIQ 264 (294)
T ss_dssp HHHHHHHSCSSGGGSCSSHH
T ss_pred HHHHHHHhcCCHhHccccHH
Confidence 8899999999999999 443
No 54
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1e-41 Score=354.39 Aligned_cols=219 Identities=21% Similarity=0.236 Sum_probs=194.1
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCceEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 499 (652)
++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|..+++++ +||||+++++++.+.+..|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56889999999999999999975 58899999997652 23445678899999988 899999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~-- 162 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-- 162 (345)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC--
T ss_pred EeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccC--
Confidence 99999999999987654 689999999999999999999999 999999999999999999999999999985321
Q ss_pred CccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch------------------------------
Q 041689 580 QSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS------------------------------ 629 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~------------------------------ 629 (652)
........+||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 163 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~ 242 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSL 242 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTS
T ss_pred CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCC
Confidence 22233456799999999999999999999999999999999999999842
Q ss_pred --hhhhhhcccchhhhccccCc
Q 041689 630 --FVFNLAMECTIESLELRINA 649 (652)
Q Consensus 630 --~l~~l~~~~l~~~p~~Rpt~ 649 (652)
.+.+++.+||+.||++||++
T Consensus 243 s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 243 SVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CHHHHHHHHHHTCSSTTTSTTC
T ss_pred CHHHHHHHHHHhcCCHhHCCCC
Confidence 25789999999999999997
No 55
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.8e-42 Score=359.11 Aligned_cols=223 Identities=22% Similarity=0.274 Sum_probs=193.4
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc-----chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-----GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKEL 498 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 498 (652)
++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+..|+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 46999999999999999999865 68999999996432 1235678999999999999999999999999999999
Q ss_pred EEEccCCCChhhhhhcC---CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCc---EEEecccCC
Q 041689 499 VLEHMPHGSLEKCLYSS---NCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMV---AHLSDFGIT 572 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~---~kl~Dfg~~ 572 (652)
||||+++++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999998877543 23589999999999999999999999 9999999999999986554 999999999
Q ss_pred ccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc------------------------
Q 041689 573 KLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV------------------------ 628 (652)
Q Consensus 573 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~------------------------ 628 (652)
+..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 181 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~~~~~~~~ 258 (351)
T 3c0i_A 181 IQLGES--GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSH 258 (351)
T ss_dssp EECCTT--SCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCCCHHHHTT
T ss_pred eEecCC--CeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCCCcccccc
Confidence 876322 222344579999999999999999999999999999999999999863
Q ss_pred --hhhhhhhcccchhhhccccCccCC
Q 041689 629 --SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 --~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||..||++|||++|+
T Consensus 259 ~s~~~~~li~~~L~~dP~~R~s~~e~ 284 (351)
T 3c0i_A 259 ISESAKDLVRRMLMLDPAERITVYEA 284 (351)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 237889999999999999999764
No 56
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=9.4e-42 Score=350.54 Aligned_cols=215 Identities=23% Similarity=0.287 Sum_probs=192.8
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
.++|++.+.||+|+||.||+|+.. +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 357899999999999999999875 69999999997542 23456678899999999999999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp ECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred EeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 99999999999998754 689999999999999999999999 999999999999999999999999999986521
Q ss_pred CccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc-----------------------hhhhhhhc
Q 041689 580 QSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV-----------------------SFVFNLAM 636 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~-----------------------~~l~~l~~ 636 (652)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||. ..+.+++.
T Consensus 159 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~ 235 (318)
T 1fot_A 159 ---VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLS 235 (318)
T ss_dssp ---CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred ---ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 2234579999999999999999999999999999999999999963 34789999
Q ss_pred ccchhhhcccc
Q 041689 637 ECTIESLELRI 647 (652)
Q Consensus 637 ~~l~~~p~~Rp 647 (652)
+||..||++||
T Consensus 236 ~lL~~dp~~R~ 246 (318)
T 1fot_A 236 RLITRDLSQRL 246 (318)
T ss_dssp HHTCSCTTTCT
T ss_pred HHhccCHHHcC
Confidence 99999999999
No 57
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.4e-41 Score=364.81 Aligned_cols=313 Identities=22% Similarity=0.240 Sum_probs=285.1
Q ss_pred cCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCC
Q 041689 17 ESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSL 96 (652)
Q Consensus 17 ~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L 96 (652)
..+.++|..+ +.++++|+|++|+|+++.|..|.++++|++|+|++|+|+++.+. .|.++++|
T Consensus 21 ~~l~~ip~~~-~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~-----------------~~~~l~~L 82 (477)
T 2id5_A 21 KRFVAVPEGI-PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPG-----------------AFNNLFNL 82 (477)
T ss_dssp CCCSSCCSCC-CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTT-----------------TTTTCTTC
T ss_pred CCcCcCCCCC-CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChh-----------------hhhCCccC
Confidence 3445899988 78999999999999999999999999999999999999877653 58899999
Q ss_pred cEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecc
Q 041689 97 VVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLK 176 (652)
Q Consensus 97 ~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 176 (652)
++|+|++|+++++++. .|..+++ |++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 83 ~~L~L~~n~l~~~~~~-~~~~l~~-L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 160 (477)
T 2id5_A 83 RTLGLRSNRLKLIPLG-VFTGLSN-LTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLE 160 (477)
T ss_dssp CEEECCSSCCCSCCTT-SSTTCTT-CCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEE
T ss_pred CEEECCCCcCCccCcc-cccCCCC-CCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECC
Confidence 9999999999988776 6788886 9999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC--CCCCcccCCCCccceEecccccCCccC
Q 041689 177 DNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND--GPLPLEIGNLKVLIGIDFSMNNFSSVI 254 (652)
Q Consensus 177 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~--~~~~~~~~~l~~L~~L~ls~N~l~~~~ 254 (652)
+|++++..+..|..+++|+.|+|++|.+.+..+..|..+++|++|++++|. ..+|.......+|+.|++++|+++++.
T Consensus 161 ~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 240 (477)
T 2id5_A 161 KCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVP 240 (477)
T ss_dssp SCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCC
T ss_pred CCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccC
Confidence 999997777789999999999999999999999999999999999999985 566777777779999999999999877
Q ss_pred cccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCCC-CCCC
Q 041689 255 PTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKG-GSFG 333 (652)
Q Consensus 255 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~~ 333 (652)
+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|.+++.++.. ..+.
T Consensus 241 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 320 (477)
T 2id5_A 241 YLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVG 320 (477)
T ss_dssp HHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGG
T ss_pred HHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCc
Confidence 788999999999999999999888889999999999999999999998999999999999999999999876653 6778
Q ss_pred CcccccccCCccCCCC
Q 041689 334 NFSAESFEGNKLLCGS 349 (652)
Q Consensus 334 ~l~~~~~~~N~~~c~~ 349 (652)
+++.+++.+|+|.|..
T Consensus 321 ~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 321 NLETLILDSNPLACDC 336 (477)
T ss_dssp GCCEEECCSSCEECSG
T ss_pred ccCEEEccCCCccCcc
Confidence 8999999999999864
No 58
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=8.2e-42 Score=351.67 Aligned_cols=224 Identities=24% Similarity=0.311 Sum_probs=179.0
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
...+|++.+.||+|+||.||+|... +|+.||+|+++... ......+.+|++++++++||||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 3468999999999999999999865 68999999997553 233467889999999999999999999999999999999
Q ss_pred EccCCCChhhhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccc
Q 041689 501 EHMPHGSLEKCLYSSN-----CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL 575 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 575 (652)
||+++ +|.+++.... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 99984 9998876432 2588999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCccccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCCcch-------------------------
Q 041689 576 IGEDQSMTQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQCVS------------------------- 629 (652)
Q Consensus 576 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~------------------------- 629 (652)
... ........+|+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 159 ~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 159 GIP--VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp TSC--CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGG
T ss_pred CCC--cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhh
Confidence 322 122334568999999999876 4689999999999999999999998732
Q ss_pred --------------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 --------------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 --------------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~ 291 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQA 291 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHH
Confidence 35689999999999999999874
No 59
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.5e-42 Score=348.45 Aligned_cols=222 Identities=25% Similarity=0.322 Sum_probs=188.0
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccc--------------------------hhhhhHHHHHHHHH
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCG--------------------------RAFKSFDIECEIMK 476 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 476 (652)
.++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 467999999999999999999865 688999999965421 12356889999999
Q ss_pred hcCCCeeeeEEeeeec--CCceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCC
Q 041689 477 SIHYRNLVKIISSCSN--EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPS 554 (652)
Q Consensus 477 ~l~h~niv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~ 554 (652)
+++||||+++++++.+ .+..++||||+++++|.+++... .+++.++..++.|++.||+|||++ +|+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK--PLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHH
Confidence 9999999999999986 56889999999999998865443 589999999999999999999999 9999999999
Q ss_pred CeeeCCCCcEEEecccCCccccCCCCccccccccCCccccCccccccCc---cCcccchhhHHHHHHHHHhCCCCcc---
Q 041689 555 NVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR---VFANGDVYSFGIMLMEIHSAKQQCV--- 628 (652)
Q Consensus 555 NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~vl~elltg~~p~~--- 628 (652)
||+++.++.+||+|||+++..... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||.
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGS--DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSS--SCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEECCCCCEEEecCCCccccccc--cccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 999999999999999999875322 22234457999999999987665 4788999999999999999999863
Q ss_pred ----------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ----------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ----------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~ 290 (298)
T 2zv2_A 245 IMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEI 290 (298)
T ss_dssp HHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred HHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHH
Confidence 237889999999999999999874
No 60
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.4e-42 Score=364.96 Aligned_cols=229 Identities=22% Similarity=0.240 Sum_probs=198.3
Q ss_pred HHHHHHhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecC
Q 041689 418 LEVCRATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNE 493 (652)
Q Consensus 418 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 493 (652)
.++....++|++.+.||+|+||.||+|+.. +++.||+|+++... ......+.+|+.+++.++||||+++++++.++
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 445556788999999999999999999876 58899999997532 22345688999999999999999999999999
Q ss_pred CceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCc
Q 041689 494 EFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITK 573 (652)
Q Consensus 494 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~ 573 (652)
+..|+||||++||+|.+++... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 9999999999999999998765 489999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCccccccccCCccccCccccccCc----cCcccchhhHHHHHHHHHhCCCCcch--------------------
Q 041689 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGR----VFANGDVYSFGIMLMEIHSAKQQCVS-------------------- 629 (652)
Q Consensus 574 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslG~vl~elltg~~p~~~-------------------- 629 (652)
..... ........+||+.|+|||++.+.. ++.++|||||||++|||++|+.||..
T Consensus 217 ~~~~~-~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p 295 (410)
T 3v8s_A 217 KMNKE-GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFP 295 (410)
T ss_dssp ECCTT-SEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC
T ss_pred eeccC-CcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCC
Confidence 65322 122234567999999999987655 88999999999999999999999632
Q ss_pred -------hhhhhhcccchhhhcc--ccCccCC
Q 041689 630 -------FVFNLAMECTIESLEL--RINAKEI 652 (652)
Q Consensus 630 -------~l~~l~~~~l~~~p~~--Rpt~~ei 652 (652)
.+.+++.+||..+|++ ||+++||
T Consensus 296 ~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei 327 (410)
T 3v8s_A 296 DDNDISKEAKNLICAFLTDREVRLGRNGVEEI 327 (410)
T ss_dssp TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHH
T ss_pred CcccccHHHHHHHHHHccChhhhCCCCCHHHH
Confidence 3788999999999988 9998764
No 61
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6e-41 Score=363.33 Aligned_cols=310 Identities=19% Similarity=0.284 Sum_probs=206.6
Q ss_pred cCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEE
Q 041689 21 EIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFL 100 (652)
Q Consensus 21 ~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~ 100 (652)
++|. + +++|++|+|++|+|+++.|..|.++++|++|+|++|.+.+..+. ..|.++++|++|+
T Consensus 24 ~lp~-l-~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~----------------~~~~~l~~L~~L~ 85 (455)
T 3v47_A 24 QVPE-L-PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRN----------------NTFRGLSSLIILK 85 (455)
T ss_dssp SCCC-C-CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECT----------------TTTTTCTTCCEEE
T ss_pred cCCC-C-CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECc----------------ccccccccCCEEe
Confidence 4444 2 34555555555555555555555555555555555555322111 1244444444444
Q ss_pred cccCCCcccCCccchhcccccCcEEEccCCcccccCCcc--ccCCCCCCEEEecCccccccCCcc-ccCCCCCcEEeccc
Q 041689 101 LSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEE--IGNLTNLTAIYLGGNKLNGSIPFT-LRELQKLQYVGLKD 177 (652)
Q Consensus 101 Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~ 177 (652)
|++|+++++.|. .+..+++ |++|+|++|++++..+.. |..+++|++|+|++|++++..|.. |.++++|++|+|++
T Consensus 86 Ls~n~l~~~~~~-~~~~l~~-L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~ 163 (455)
T 3v47_A 86 LDYNQFLQLETG-AFNGLAN-LEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTF 163 (455)
T ss_dssp CTTCTTCEECTT-TTTTCTT-CCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTT
T ss_pred CCCCccCccChh-hccCccc-CCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCC
Confidence 444444444443 3444443 444444444444322222 444444444444444444443333 44444444444444
Q ss_pred CccccccCcccc----------------------------------CCCCCcEEEccCCcccccccccCCC---------
Q 041689 178 NKLEGTIPYDIF----------------------------------RLVKLYKLDLGGNKLSGSILTCFSN--------- 214 (652)
Q Consensus 178 N~l~~~~~~~~~----------------------------------~l~~L~~L~L~~N~l~~~~~~~~~~--------- 214 (652)
|++++..|..+. .+++|++|++++|++++..+..+..
T Consensus 164 n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~ 243 (455)
T 3v47_A 164 NKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQS 243 (455)
T ss_dssp CCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEE
T ss_pred CcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceee
Confidence 444444333332 3467888888888877655443321
Q ss_pred ------------------------------CCCCCEEEccCCC--CCCCcccCCCCccceEecccccCCccCcccccCCC
Q 041689 215 ------------------------------LASLRTLSLSYND--GPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLK 262 (652)
Q Consensus 215 ------------------------------l~~L~~L~Ls~N~--~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~ 262 (652)
.++|++|++++|. ...|..++.+++|+.|++++|++++..|..|.+++
T Consensus 244 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 323 (455)
T 3v47_A 244 LILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLT 323 (455)
T ss_dssp EECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred EeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcc
Confidence 2578899999886 44677799999999999999999998899999999
Q ss_pred CCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCCC-CCCCCccccccc
Q 041689 263 DLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKG-GSFGNFSAESFE 341 (652)
Q Consensus 263 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~~~l~~~~~~ 341 (652)
+|++|+|++|++++..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++.++.. ..+..++.++++
T Consensus 324 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 403 (455)
T 3v47_A 324 HLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLH 403 (455)
T ss_dssp TCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred cCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEcc
Confidence 9999999999999888899999999999999999999888999999999999999999999877654 678899999999
Q ss_pred CCccCCCCC
Q 041689 342 GNKLLCGSP 350 (652)
Q Consensus 342 ~N~~~c~~~ 350 (652)
+|++.|..|
T Consensus 404 ~N~l~~~~~ 412 (455)
T 3v47_A 404 TNPWDCSCP 412 (455)
T ss_dssp SSCBCCCTT
T ss_pred CCCcccCCC
Confidence 999999765
No 62
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.1e-42 Score=351.16 Aligned_cols=226 Identities=27% Similarity=0.422 Sum_probs=192.6
Q ss_pred hcCCCccceeccccceEEEEEEe-----CCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecC--Cce
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNE--EFK 496 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 496 (652)
..+|++.+.||+|+||.||+|++ .+++.||||+++.......+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 35788999999999999999983 35889999999876666677899999999999999999999998543 568
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcccc
Q 041689 497 ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576 (652)
Q Consensus 497 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 576 (652)
++||||+++|+|.+++......+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 999999999999999987766799999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCc-cccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCc----------------------------
Q 041689 577 GEDQS-MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQC---------------------------- 627 (652)
Q Consensus 577 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~---------------------------- 627 (652)
..... .......++..|+|||++.+..++.++|||||||++|||++|..|+
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHH
Confidence 32221 1223345778899999999999999999999999999999987663
Q ss_pred ------------chhhhhhhcccchhhhccccCccCC
Q 041689 628 ------------VSFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 628 ------------~~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+..+.+++.+||+.||++|||++||
T Consensus 246 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 282 (295)
T 3ugc_A 246 KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282 (295)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred hccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 2447889999999999999999874
No 63
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.1e-41 Score=352.92 Aligned_cols=226 Identities=21% Similarity=0.322 Sum_probs=191.0
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCC-------
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEE------- 494 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 494 (652)
..+|++.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457899999999999999999976 79999999997543 335578899999999999999999999885443
Q ss_pred --------------------------------------------------ceEEEEEccCCCChhhhhhcCCC--CCCHH
Q 041689 495 --------------------------------------------------FKELVLEHMPHGSLEKCLYSSNC--ILDIF 522 (652)
Q Consensus 495 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~--~l~~~ 522 (652)
..++||||+++++|.+++..... ..++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 37999999999999999986543 45666
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCc----------cccccccCCcc
Q 041689 523 QRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS----------MTQTQTLATIG 592 (652)
Q Consensus 523 ~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~----------~~~~~~~gt~~ 592 (652)
.+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++........ .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 7899999999999999999 9999999999999999999999999999876433211 12234569999
Q ss_pred ccCccccccCccCcccchhhHHHHHHHHHhCCCCcc----------------------hhhhhhhcccchhhhccccCcc
Q 041689 593 YIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV----------------------SFVFNLAMECTIESLELRINAK 650 (652)
Q Consensus 593 y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~----------------------~~l~~l~~~~l~~~p~~Rpt~~ 650 (652)
|+|||++.+..++.++||||+||++|||++|..|+. +.+.+++.+||+.||++|||++
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 321 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEAT 321 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHH
Confidence 999999999999999999999999999999988742 2367899999999999999998
Q ss_pred CC
Q 041689 651 EI 652 (652)
Q Consensus 651 ei 652 (652)
|+
T Consensus 322 ~~ 323 (332)
T 3qd2_B 322 DI 323 (332)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 64
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.1e-42 Score=362.77 Aligned_cols=232 Identities=19% Similarity=0.244 Sum_probs=199.3
Q ss_pred cHHHHHHHhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeee
Q 041689 416 SYLEVCRATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCS 491 (652)
Q Consensus 416 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 491 (652)
.+.+.....++|++.+.||+|+||.||+|+.. +|+.||+|+++... ....+.+.+|..++.+++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 44555566789999999999999999999975 69999999997532 223456889999999999999999999999
Q ss_pred cCCceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccC
Q 041689 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGI 571 (652)
Q Consensus 492 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~ 571 (652)
+.+..|+||||+++|+|.+++...+..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechh
Confidence 99999999999999999999987555799999999999999999999999 999999999999999999999999999
Q ss_pred CccccCCCCccccccccCCccccCccccc-------cCccCcccchhhHHHHHHHHHhCCCCcch---------------
Q 041689 572 TKLLIGEDQSMTQTQTLATIGYIAPEYGR-------EGRVFANGDVYSFGIMLMEIHSAKQQCVS--------------- 629 (652)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwslG~vl~elltg~~p~~~--------------- 629 (652)
++...... .......+||+.|+|||++. .+.++.++|||||||++|||++|+.||..
T Consensus 209 a~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~ 287 (412)
T 2vd5_A 209 CLKLRADG-TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKE 287 (412)
T ss_dssp CEECCTTS-CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH
T ss_pred heeccCCC-ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhccc
Confidence 98753221 12223457999999999987 45789999999999999999999999532
Q ss_pred -------------hhhhhhcccchhhhccc---cCccCC
Q 041689 630 -------------FVFNLAMECTIESLELR---INAKEI 652 (652)
Q Consensus 630 -------------~l~~l~~~~l~~~p~~R---pt~~ei 652 (652)
.+.+++.+||. +|++| |+++||
T Consensus 288 ~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei 325 (412)
T 2vd5_A 288 HLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDF 325 (412)
T ss_dssp HCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHH
T ss_pred CcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHH
Confidence 36789999999 99998 466653
No 65
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.6e-41 Score=345.29 Aligned_cols=237 Identities=31% Similarity=0.490 Sum_probs=206.0
Q ss_pred ccccccHHHHHHHhcCCCcc------ceeccccceEEEEEEeCCCcEEEEEEeecc----cchhhhhHHHHHHHHHhcCC
Q 041689 411 TWRRFSYLEVCRATYGFNEN------NLIGKGGFGTIYKSRIGDGMEVAVKVFHLQ----CGRAFKSFDIECEIMKSIHY 480 (652)
Q Consensus 411 ~~~~~~~~~~~~~~~~y~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h 480 (652)
....|+..++..++++|... +.||+|+||.||+|.. +++.||+|++... .....+.+.+|++++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 45678999999999999887 8999999999999987 6889999998643 22345678999999999999
Q ss_pred CeeeeEEeeeecCCceEEEEEccCCCChhhhhhcC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee
Q 041689 481 RNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSS--NCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL 558 (652)
Q Consensus 481 ~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll 558 (652)
|||+++++++...+..++||||+++++|.+++... ...+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence 99999999999999999999999999999988643 23689999999999999999999999 99999999999999
Q ss_pred CCCCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch---------
Q 041689 559 DDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS--------- 629 (652)
Q Consensus 559 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~--------- 629 (652)
++++.+||+|||+++...............||+.|+|||.+.+ .++.++|||||||++|||++|+.||..
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 245 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 245 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTH
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHH
Confidence 9999999999999986543333333344568999999998764 588999999999999999999999753
Q ss_pred -----------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 -----------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -----------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l 297 (307)
T 2nru_A 246 IKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297 (307)
T ss_dssp HHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHH
Confidence 25679999999999999999864
No 66
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.8e-42 Score=361.80 Aligned_cols=238 Identities=21% Similarity=0.332 Sum_probs=203.0
Q ss_pred cccccHHHHHHHhcCCCccceeccccceEEEEEEe------CCCcEEEEEEeeccc-chhhhhHHHHHHHHHhc-CCCee
Q 041689 412 WRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRI------GDGMEVAVKVFHLQC-GRAFKSFDIECEIMKSI-HYRNL 483 (652)
Q Consensus 412 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~ni 483 (652)
...+...+.....++|.+.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|+++++++ +||||
T Consensus 9 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpni 88 (359)
T 3vhe_A 9 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 88 (359)
T ss_dssp GSCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred hCCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcce
Confidence 34456666777788999999999999999999973 246889999997653 33456789999999999 79999
Q ss_pred eeEEeeeecCC-ceEEEEEccCCCChhhhhhcCCC---------------------------------------------
Q 041689 484 VKIISSCSNEE-FKELVLEHMPHGSLEKCLYSSNC--------------------------------------------- 517 (652)
Q Consensus 484 v~~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~--------------------------------------------- 517 (652)
+++++++.+.+ ..++||||+++|+|.+++.....
T Consensus 89 v~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (359)
T 3vhe_A 89 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV 168 (359)
T ss_dssp CCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------
T ss_pred eeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccc
Confidence 99999988754 48999999999999999876532
Q ss_pred --------------------CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccC
Q 041689 518 --------------------ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 518 --------------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 577 (652)
.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 245 (359)
T 3vhe_A 169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYK 245 (359)
T ss_dssp ---------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTS
T ss_pred cccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecc
Confidence 188999999999999999999999 999999999999999999999999999986644
Q ss_pred CCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch-------------------------hh
Q 041689 578 EDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS-------------------------FV 631 (652)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~-------------------------~l 631 (652)
...........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.. .+
T Consensus 246 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 325 (359)
T 3vhe_A 246 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM 325 (359)
T ss_dssp CTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHH
T ss_pred cccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHH
Confidence 333333445668899999999999999999999999999999998 9998643 37
Q ss_pred hhhhcccchhhhccccCccCC
Q 041689 632 FNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 632 ~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+++.+||+.||++|||++||
T Consensus 326 ~~li~~~l~~dP~~Rps~~el 346 (359)
T 3vhe_A 326 YQTMLDCWHGEPSQRPTFSEL 346 (359)
T ss_dssp HHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHccCChhhCCCHHHH
Confidence 889999999999999999874
No 67
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.9e-41 Score=352.90 Aligned_cols=221 Identities=21% Similarity=0.216 Sum_probs=194.6
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCceE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEFKE 497 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 497 (652)
...+|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+..|.++++.+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3468999999999999999999976 48899999997542 23456678899999988 7999999999999999999
Q ss_pred EEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccC
Q 041689 498 LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 577 (652)
+||||++||+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999987654 689999999999999999999999 999999999999999999999999999985321
Q ss_pred CCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch-----------------------hhhhh
Q 041689 578 EDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS-----------------------FVFNL 634 (652)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~-----------------------~l~~l 634 (652)
........+||+.|+|||++.+..++.++||||+||++|||++|+.||.. .+.++
T Consensus 174 --~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l 251 (353)
T 2i0e_A 174 --DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAI 251 (353)
T ss_dssp --TTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred --CCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 12233456799999999999999999999999999999999999999643 36899
Q ss_pred hcccchhhhccccCc
Q 041689 635 AMECTIESLELRINA 649 (652)
Q Consensus 635 ~~~~l~~~p~~Rpt~ 649 (652)
+.+||..||++||++
T Consensus 252 i~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 252 CKGLMTKHPGKRLGC 266 (353)
T ss_dssp HHHHTCSCTTSCTTC
T ss_pred HHHHhhcCHHHcCCC
Confidence 999999999999975
No 68
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.3e-41 Score=365.37 Aligned_cols=329 Identities=21% Similarity=0.216 Sum_probs=295.2
Q ss_pred ceeeeceeEeccCCCcCCccCCCCC-CCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCC
Q 041689 2 FSISIGKLELNVDDIESPCEIPSEI-NPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSS 80 (652)
Q Consensus 2 ~~~~l~~l~l~~~~~~~~~~ip~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~ 80 (652)
+|.+++.|+|+.|.++. ..|..+ ++++|++|+|++|+|+++.|..|.++++|++|+|++|+|+++++.
T Consensus 30 ~~~~l~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--------- 98 (477)
T 2id5_A 30 IPTETRLLDLGKNRIKT--LNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLG--------- 98 (477)
T ss_dssp CCTTCSEEECCSSCCCE--ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTT---------
T ss_pred CCCCCcEEECCCCccce--ECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcc---------
Confidence 56789999999999984 235556 889999999999999999999999999999999999999866553
Q ss_pred CCCcccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccC
Q 041689 81 TPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSI 160 (652)
Q Consensus 81 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 160 (652)
.|.++++|++|+|++|+++++.+. .+..+++ |++|+|++|+++++.+..|.++++|++|+|++|++++..
T Consensus 99 --------~~~~l~~L~~L~Ls~n~i~~~~~~-~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 168 (477)
T 2id5_A 99 --------VFTGLSNLTKLDISENKIVILLDY-MFQDLYN-LKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP 168 (477)
T ss_dssp --------SSTTCTTCCEEECTTSCCCEECTT-TTTTCTT-CCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCC
T ss_pred --------cccCCCCCCEEECCCCccccCChh-Hcccccc-CCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccC
Confidence 478899999999999999998887 7888886 999999999999999999999999999999999999888
Q ss_pred CccccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCC-cccCCCC
Q 041689 161 PFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLP-LEIGNLK 238 (652)
Q Consensus 161 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~-~~~~~l~ 238 (652)
+..|.++++|+.|+|++|.+++..+..|..+++|+.|++++|.+.+..+..+....+|++|+|++|. ..+| ..+.+++
T Consensus 169 ~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 248 (477)
T 2id5_A 169 TEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLV 248 (477)
T ss_dssp HHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCT
T ss_pred hhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCcc
Confidence 8889999999999999999998888899999999999999999887777777777799999999997 5555 3589999
Q ss_pred ccceEecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEee
Q 041689 239 VLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLS 318 (652)
Q Consensus 239 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 318 (652)
+|+.|+|++|.++++.+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|+
T Consensus 249 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 328 (477)
T 2id5_A 249 YLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILD 328 (477)
T ss_dssp TCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECC
T ss_pred ccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEcc
Confidence 99999999999999988999999999999999999999999999999999999999999998888889999999999999
Q ss_pred cCcCcccCCCCCCCCCcccccccCCccCCCCCC
Q 041689 319 FNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPN 351 (652)
Q Consensus 319 ~N~l~~~~p~~~~~~~l~~~~~~~N~~~c~~~~ 351 (652)
+|+|.|.++..+.+.......+.++...|..|.
T Consensus 329 ~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 329 SNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp SSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred CCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 999998776443333444566788888997764
No 69
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.4e-41 Score=349.24 Aligned_cols=214 Identities=21% Similarity=0.256 Sum_probs=172.7
Q ss_pred cceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcC-CCeeeeEEeeeecCCceEEEEEccCCCC
Q 041689 430 NNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH-YRNLVKIISSCSNEEFKELVLEHMPHGS 507 (652)
Q Consensus 430 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g~ 507 (652)
.+.||+|+||.||+|+.. +++.||||++... ....+.+|+++++.+. ||||+++++++.+++..|+||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999875 6899999999743 3466788999999997 9999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCC---cEEEecccCCccccCCCCcccc
Q 041689 508 LEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM---VAHLSDFGITKLLIGEDQSMTQ 584 (652)
Q Consensus 508 L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~---~~kl~Dfg~~~~~~~~~~~~~~ 584 (652)
|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++.... .....
T Consensus 93 L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~--~~~~~ 166 (325)
T 3kn6_A 93 LFERIKKKK-HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP--DNQPL 166 (325)
T ss_dssp HHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCC--CCCcc
Confidence 999998764 799999999999999999999999 999999999999997665 899999999986532 22223
Q ss_pred ccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc----------------------------------hh
Q 041689 585 TQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV----------------------------------SF 630 (652)
Q Consensus 585 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~----------------------------------~~ 630 (652)
....||+.|+|||++.+..++.++||||+||++|||++|+.||. ..
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 246 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQE 246 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHH
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHH
Confidence 44568999999999999999999999999999999999999974 23
Q ss_pred hhhhhcccchhhhccccCccCC
Q 041689 631 VFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 631 l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+.+++.+||..||++|||++|+
T Consensus 247 ~~~li~~~L~~dP~~Rpt~~el 268 (325)
T 3kn6_A 247 AKDLIQGLLTVDPNKRLKMSGL 268 (325)
T ss_dssp HHHHHHHHHCCCTTTCCCTTTS
T ss_pred HHHHHHHHCCCChhHCCCHHHH
Confidence 6789999999999999999986
No 70
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.5e-41 Score=353.68 Aligned_cols=215 Identities=22% Similarity=0.258 Sum_probs=193.4
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
++|++.+.||+|+||.||+|+.. +|+.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57889999999999999999875 68999999997542 234567888999999999999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~--- 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--- 193 (350)
T ss_dssp ECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS---
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC---
Confidence 9999999999998654 689999999999999999999999 999999999999999999999999999986532
Q ss_pred ccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc-----------------------hhhhhhhcc
Q 041689 581 SMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV-----------------------SFVFNLAME 637 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~-----------------------~~l~~l~~~ 637 (652)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||. ..+.+++.+
T Consensus 194 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~ 271 (350)
T 1rdq_E 194 --RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271 (350)
T ss_dssp --CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHH
T ss_pred --CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 1234579999999999999999999999999999999999999963 347899999
Q ss_pred cchhhhccccC
Q 041689 638 CTIESLELRIN 648 (652)
Q Consensus 638 ~l~~~p~~Rpt 648 (652)
||+.||++||+
T Consensus 272 lL~~dp~~R~~ 282 (350)
T 1rdq_E 272 LLQVDLTKRFG 282 (350)
T ss_dssp HSCSCTTTCTT
T ss_pred HhhcCHHhccC
Confidence 99999999998
No 71
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=7.2e-42 Score=346.25 Aligned_cols=225 Identities=22% Similarity=0.359 Sum_probs=195.0
Q ss_pred HhcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEc
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 502 (652)
..++|++.+.||+|+||.||+|++.++..||+|+++.... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 3457889999999999999999998888999999976532 346789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCcc
Q 041689 503 MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSM 582 (652)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 582 (652)
+++++|.+++......+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~ 176 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYT 176 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH-HHH
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccc-ccc
Confidence 999999999987555799999999999999999999999 9999999999999999999999999999865221 111
Q ss_pred ccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------hhhhhhhcc
Q 041689 583 TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------SFVFNLAME 637 (652)
Q Consensus 583 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~~l~~l~~~ 637 (652)
......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||. ..+.+++.+
T Consensus 177 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 256 (283)
T 3gen_A 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYS 256 (283)
T ss_dssp STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHHHH
Confidence 2233446788999999998899999999999999999998 998854 337899999
Q ss_pred cchhhhccccCccCC
Q 041689 638 CTIESLELRINAKEI 652 (652)
Q Consensus 638 ~l~~~p~~Rpt~~ei 652 (652)
||+.||++|||++||
T Consensus 257 ~l~~~p~~Rps~~~l 271 (283)
T 3gen_A 257 CWHEKADERPTFKIL 271 (283)
T ss_dssp TTCSSGGGSCCHHHH
T ss_pred HccCChhHCcCHHHH
Confidence 999999999999864
No 72
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=357.48 Aligned_cols=220 Identities=20% Similarity=0.303 Sum_probs=190.2
Q ss_pred CCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEccCC
Q 041689 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPH 505 (652)
Q Consensus 427 y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 505 (652)
|...+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 344678999999999999864 6899999999876555667899999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee--CCCCcEEEecccCCccccCCCCccc
Q 041689 506 GSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL--DDTMVAHLSDFGITKLLIGEDQSMT 583 (652)
Q Consensus 506 g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll--~~~~~~kl~Dfg~~~~~~~~~~~~~ 583 (652)
++|.+++......+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++..... ..
T Consensus 171 ~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~---~~ 244 (373)
T 2x4f_A 171 GELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR---EK 244 (373)
T ss_dssp CEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT---CB
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc---cc
Confidence 999998877666799999999999999999999999 99999999999999 67789999999999876322 22
Q ss_pred cccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc---------------------------hhhhhhhc
Q 041689 584 QTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV---------------------------SFVFNLAM 636 (652)
Q Consensus 584 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~---------------------------~~l~~l~~ 636 (652)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||. ..+.+++.
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 324 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFIS 324 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHH
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHH
Confidence 334569999999999998999999999999999999999999953 23688999
Q ss_pred ccchhhhccccCccCC
Q 041689 637 ECTIESLELRINAKEI 652 (652)
Q Consensus 637 ~~l~~~p~~Rpt~~ei 652 (652)
+||+.||++|||++|+
T Consensus 325 ~~L~~dp~~Rps~~e~ 340 (373)
T 2x4f_A 325 KLLIKEKSWRISASEA 340 (373)
T ss_dssp TTSCSSGGGSCCHHHH
T ss_pred HHcCCChhhCCCHHHH
Confidence 9999999999999874
No 73
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.6e-41 Score=347.72 Aligned_cols=223 Identities=25% Similarity=0.398 Sum_probs=188.5
Q ss_pred hcCCCccceeccccceEEEEEEeCCCcEEEEEEeecc--cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 501 (652)
..+|.+.+.||+|+||.||+|++. ..+|+|+++.. .....+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 467899999999999999999864 36899988753 2344567899999999999999999999875 455789999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCc
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 581 (652)
|+++++|.+++......+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++........
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 9999999999987766899999999999999999999999 9999999999999999999999999999865332233
Q ss_pred cccccccCCccccCccccc---cCccCcccchhhHHHHHHHHHhCCCCcch-----------------------------
Q 041689 582 MTQTQTLATIGYIAPEYGR---EGRVFANGDVYSFGIMLMEIHSAKQQCVS----------------------------- 629 (652)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~----------------------------- 629 (652)
.......||+.|+|||++. +..++.++|||||||++|||++|+.||..
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPK 268 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSSCH
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcCCcH
Confidence 3334557999999999886 56788999999999999999999999642
Q ss_pred hhhhhhcccchhhhccccCccCC
Q 041689 630 FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||+.||
T Consensus 269 ~l~~li~~~l~~~p~~RPs~~~i 291 (307)
T 3lb7_A 269 AMKRLVADCVKKVKEERPLFPQI 291 (307)
T ss_dssp HHHHHHHHHSCSSSTTSCCHHHH
T ss_pred HHHHHHHHHhhCChhhCcCHHHH
Confidence 36889999999999999999874
No 74
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-41 Score=349.11 Aligned_cols=223 Identities=22% Similarity=0.295 Sum_probs=193.1
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCC--ceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEE--FKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv 499 (652)
.++|.+.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 357899999999999999999876 58999999997543 234567789999999999999999999987654 77999
Q ss_pred EEccCCCChhhhhhcCCC--CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee----CCCCcEEEecccCCc
Q 041689 500 LEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL----DDTMVAHLSDFGITK 573 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll----~~~~~~kl~Dfg~~~ 573 (652)
|||+++++|.+++..... .+++.++..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 999999999999976543 389999999999999999999999 99999999999999 788899999999998
Q ss_pred cccCCCCccccccccCCccccCccccc--------cCccCcccchhhHHHHHHHHHhCCCCcch----------------
Q 041689 574 LLIGEDQSMTQTQTLATIGYIAPEYGR--------EGRVFANGDVYSFGIMLMEIHSAKQQCVS---------------- 629 (652)
Q Consensus 574 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDvwslG~vl~elltg~~p~~~---------------- 629 (652)
..... .......||+.|+|||++. +..++.++|||||||++|||++|+.||..
T Consensus 165 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 165 ELEDD---EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp ECCTT---CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred ecCCC---CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 76322 2233456999999999876 57889999999999999999999999751
Q ss_pred ------------------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ------------------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ------------------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~el 300 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQF 300 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHH
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHh
Confidence 36778999999999999999874
No 75
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=8e-42 Score=359.31 Aligned_cols=225 Identities=23% Similarity=0.412 Sum_probs=185.3
Q ss_pred cCCCccceeccccceEEEEEEeC----CCcEEEEEEeecc-cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG----DGMEVAVKVFHLQ-CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
.+|++.+.||+|+||.||+|+.. ++..||||+++.. .....+.+.+|++++++++||||+++++++...+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57899999999999999999864 5778999999765 334456799999999999999999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|||+++|+|.+++......+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 999999999999987766799999999999999999999999 99999999999999999999999999998763322
Q ss_pred Cc-cccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------hhhhh
Q 041689 580 QS-MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------SFVFN 633 (652)
Q Consensus 580 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~~l~~ 633 (652)
.. .......+++.|+|||++.+..++.++|||||||++|||++ |+.||. ..+.+
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 281 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQ 281 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHHHHH
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHH
Confidence 11 11122335778999999999999999999999999999998 999863 34789
Q ss_pred hhcccchhhhccccCccCC
Q 041689 634 LAMECTIESLELRINAKEI 652 (652)
Q Consensus 634 l~~~~l~~~p~~Rpt~~ei 652 (652)
++.+||+.||++||+++||
T Consensus 282 li~~cl~~dp~~RPs~~~i 300 (373)
T 2qol_A 282 LMLDCWQKDRNNRPKFEQI 300 (373)
T ss_dssp HHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHhCcChhhCcCHHHH
Confidence 9999999999999999864
No 76
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.5e-41 Score=351.23 Aligned_cols=220 Identities=23% Similarity=0.296 Sum_probs=184.6
Q ss_pred hcCCCccceeccccceEEEEEEe----CCCcEEEEEEeeccc----chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI----GDGMEVAVKVFHLQC----GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEF 495 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 495 (652)
.++|++.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|++++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35789999999999999999986 468999999997542 2334567889999999999999999999999999
Q ss_pred eEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccc
Q 041689 496 KELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL 575 (652)
Q Consensus 496 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 575 (652)
.|+||||+++++|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 999999999999999987654 688999999999999999999999 9999999999999999999999999999754
Q ss_pred cCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch-----------------------hhh
Q 041689 576 IGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS-----------------------FVF 632 (652)
Q Consensus 576 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~-----------------------~l~ 632 (652)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.. .+.
T Consensus 172 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 249 (327)
T 3a62_A 172 IHD--GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEAR 249 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTSCHHHH
T ss_pred ccC--CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 221 1223345799999999999999999999999999999999999999643 378
Q ss_pred hhhcccchhhhccccCc
Q 041689 633 NLAMECTIESLELRINA 649 (652)
Q Consensus 633 ~l~~~~l~~~p~~Rpt~ 649 (652)
+++.+||+.||++||++
T Consensus 250 ~li~~~L~~dp~~R~~~ 266 (327)
T 3a62_A 250 DLLKKLLKRNAASRLGA 266 (327)
T ss_dssp HHHHHHSCSCGGGSTTS
T ss_pred HHHHHHHhcCHhhccCC
Confidence 99999999999999954
No 77
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-42 Score=361.59 Aligned_cols=225 Identities=26% Similarity=0.361 Sum_probs=193.6
Q ss_pred cCCCccceeccccceEEEEEEeC------CCcEEEEEEeecc-cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG------DGMEVAVKVFHLQ-CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKE 497 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 497 (652)
++|++.+.||+|+||.||+|++. +++.||||+++.. .......+.+|+.++++++||||+++++++...+..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56888999999999999999842 4678999999654 3344567889999999999999999999999999999
Q ss_pred EEEEccCCCChhhhhhcCC------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCC---cEEEec
Q 041689 498 LVLEHMPHGSLEKCLYSSN------CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM---VAHLSD 568 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~---~~kl~D 568 (652)
+||||+++|+|.+++.... ..+++.++..++.|++.||+|||++ ||+||||||+||+++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999987543 3589999999999999999999999 999999999999999544 599999
Q ss_pred ccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch------------------
Q 041689 569 FGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS------------------ 629 (652)
Q Consensus 569 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~------------------ 629 (652)
||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~ 307 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP 307 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 999986533222233344567899999999999999999999999999999998 8888543
Q ss_pred ------hhhhhhcccchhhhccccCccCC
Q 041689 630 ------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 308 ~~~~~~~l~~li~~~l~~dP~~Rps~~ei 336 (367)
T 3l9p_A 308 PKNCPGPVYRIMTQCWQHQPEDRPNFAII 336 (367)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CccCCHHHHHHHHHHcCCCHhHCcCHHHH
Confidence 37889999999999999999874
No 78
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.7e-41 Score=351.52 Aligned_cols=223 Identities=18% Similarity=0.207 Sum_probs=195.8
Q ss_pred hcCCCccceeccccceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCceEEEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 501 (652)
..+|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+|+++++++ +||||+++++++..++..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 35799999999999999999986 478999999987543 235688999999999 99999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCc-----EEEecccCCcccc
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMV-----AHLSDFGITKLLI 576 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~-----~kl~Dfg~~~~~~ 576 (652)
|+ +++|.+++......+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++.+.
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 8999999987656799999999999999999999999 9999999999999998887 9999999998764
Q ss_pred CCCCcc-----ccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch----------------------
Q 041689 577 GEDQSM-----TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS---------------------- 629 (652)
Q Consensus 577 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~---------------------- 629 (652)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 241 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI 241 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCH
Confidence 332211 12355799999999999999999999999999999999999999753
Q ss_pred --------hhhhhhcccchhhhccccCccCC
Q 041689 630 --------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 --------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++||++++|
T Consensus 242 ~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l 272 (330)
T 2izr_A 242 EVLCENFPEMATYLRYVRRLDFFEKPDYDYL 272 (330)
T ss_dssp HHHTTTCHHHHHHHHHHHHCCTTCCCCHHHH
T ss_pred HHHhccChHHHHHHHHHHhCCCCCCCCHHHH
Confidence 46789999999999999998764
No 79
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-41 Score=357.82 Aligned_cols=226 Identities=23% Similarity=0.343 Sum_probs=197.0
Q ss_pred hcCCCccceeccccceEEEEEEeC--------CCcEEEEEEeeccc-chhhhhHHHHHHHHHhc-CCCeeeeEEeeeecC
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG--------DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSI-HYRNLVKIISSCSNE 493 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 493 (652)
.++|.+.+.||+|+||.||+|+.. ++..||||+++... ......+.+|+++++++ +||||+++++++..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 457889999999999999999852 24679999997653 34457788999999999 999999999999999
Q ss_pred CceEEEEEccCCCChhhhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee
Q 041689 494 EFKELVLEHMPHGSLEKCLYSSN---------------CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL 558 (652)
Q Consensus 494 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll 558 (652)
+..++||||+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 99999999999999999997654 2589999999999999999999999 99999999999999
Q ss_pred CCCCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc---------
Q 041689 559 DDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV--------- 628 (652)
Q Consensus 559 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~--------- 628 (652)
++++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~ 304 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 304 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 9999999999999987643333233344567889999999999999999999999999999999 988854
Q ss_pred ---------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ---------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ---------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++||
T Consensus 305 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 343 (382)
T 3tt0_A 305 LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 343 (382)
T ss_dssp HHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 347889999999999999999874
No 80
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3.1e-41 Score=357.76 Aligned_cols=203 Identities=20% Similarity=0.228 Sum_probs=176.2
Q ss_pred HhcCCCccceeccc--cceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceE
Q 041689 423 ATYGFNENNLIGKG--GFGTIYKSRIG-DGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKE 497 (652)
Q Consensus 423 ~~~~y~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 497 (652)
...+|++.+.||+| +||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+++..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 34579999999999 99999999976 69999999997653 334567888999999999999999999999999999
Q ss_pred EEEEccCCCChhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcccc
Q 041689 498 LVLEHMPHGSLEKCLYSSN-CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 576 (652)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 9999999999999987652 3689999999999999999999999 99999999999999999999999999986543
Q ss_pred CCCC-----ccccccccCCccccCcccccc--CccCcccchhhHHHHHHHHHhCCCCcc
Q 041689 577 GEDQ-----SMTQTQTLATIGYIAPEYGRE--GRVFANGDVYSFGIMLMEIHSAKQQCV 628 (652)
Q Consensus 577 ~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~p~~ 628 (652)
.... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 238 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 238 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence 2211 111223468999999999887 679999999999999999999999974
No 81
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.6e-41 Score=356.08 Aligned_cols=209 Identities=26% Similarity=0.293 Sum_probs=182.2
Q ss_pred CccccccHHHHHHHhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcC-----CCee
Q 041689 410 ATWRRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH-----YRNL 483 (652)
Q Consensus 410 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~ni 483 (652)
....++++.+.....++|.+.+.||+|+||.||+|+.. +++.||||+++.. ......+..|++++++++ ||||
T Consensus 20 ~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~i 98 (360)
T 3llt_A 20 DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNI 98 (360)
T ss_dssp CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred ccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCe
Confidence 34556666666677889999999999999999999874 6899999999743 334566788999999996 9999
Q ss_pred eeEEeeeecCCceEEEEEccCCCChhhhhhcCCC-CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCC--
Q 041689 484 VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNC-ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDD-- 560 (652)
Q Consensus 484 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~-- 560 (652)
+++++++...+..++||||+ +++|.+++..... .+++.++..++.|++.||+|||++ ||+||||||+||+++.
T Consensus 99 v~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~ 174 (360)
T 3llt_A 99 VKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPY 174 (360)
T ss_dssp CCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTT
T ss_pred ecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcccc
Confidence 99999999999999999999 8899999876542 589999999999999999999999 9999999999999975
Q ss_pred -----------------------CCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHH
Q 041689 561 -----------------------TMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIML 617 (652)
Q Consensus 561 -----------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl 617 (652)
++.+||+|||+++.... ......||+.|+|||++.+..++.++||||+||++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 249 (360)
T 3llt_A 175 FEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-----YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVL 249 (360)
T ss_dssp CCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS-----CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred ccccccchhcccccccccccccCCCCEEEEeccCceecCC-----CCcCccCcccccCcHHHcCCCCCCccchHHHHHHH
Confidence 78999999999986422 22345689999999999999999999999999999
Q ss_pred HHHHhCCCCcc
Q 041689 618 MEIHSAKQQCV 628 (652)
Q Consensus 618 ~elltg~~p~~ 628 (652)
|||++|+.||.
T Consensus 250 ~ell~g~~pf~ 260 (360)
T 3llt_A 250 AELYTGSLLFR 260 (360)
T ss_dssp HHHHHSSCSCC
T ss_pred HHHHHCCCCCC
Confidence 99999999974
No 82
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=352.10 Aligned_cols=223 Identities=21% Similarity=0.285 Sum_probs=196.0
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccc--------hhhhhHHHHHHHHHhcCCCeeeeEEeeeecC
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCG--------RAFKSFDIECEIMKSIHYRNLVKIISSCSNE 493 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 493 (652)
..++|++.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 3567999999999999999999864 689999999975421 2345677899999999999999999999999
Q ss_pred CceEEEEEccCCC-ChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCC
Q 041689 494 EFKELVLEHMPHG-SLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGIT 572 (652)
Q Consensus 494 ~~~~lv~e~~~~g-~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~ 572 (652)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 9999887665 699999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCccccccccCCccccCccccccCcc-CcccchhhHHHHHHHHHhCCCCc-----------------chhhhhh
Q 041689 573 KLLIGEDQSMTQTQTLATIGYIAPEYGREGRV-FANGDVYSFGIMLMEIHSAKQQC-----------------VSFVFNL 634 (652)
Q Consensus 573 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~p~-----------------~~~l~~l 634 (652)
+..... .......||+.|+|||++.+..+ +.++|||||||++|||++|+.|| +..+.++
T Consensus 178 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~l~~l 254 (335)
T 3dls_A 178 AYLERG---KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSL 254 (335)
T ss_dssp EECCTT---CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTTCCCCSSCCCHHHHHH
T ss_pred eECCCC---CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhhccCCCcccCHHHHHH
Confidence 875322 22334569999999999988877 78899999999999999999996 3458899
Q ss_pred hcccchhhhccccCccCC
Q 041689 635 AMECTIESLELRINAKEI 652 (652)
Q Consensus 635 ~~~~l~~~p~~Rpt~~ei 652 (652)
+.+||+.||++|||++||
T Consensus 255 i~~~L~~dP~~Rps~~el 272 (335)
T 3dls_A 255 VSGLLQPVPERRTTLEKL 272 (335)
T ss_dssp HHHHTCSSGGGSCCHHHH
T ss_pred HHHHccCChhhCcCHHHH
Confidence 999999999999999864
No 83
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.8e-41 Score=364.34 Aligned_cols=221 Identities=24% Similarity=0.292 Sum_probs=196.3
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
++|.+.+.||+|+||.||+|++. +|+.||||++.... ......+.+|+++++.++||||+++++++...+..|+||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57899999999999999999875 79999999997542 223467889999999999999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
||+++|+|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.....
T Consensus 96 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~-- 169 (476)
T 2y94_A 96 EYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-- 169 (476)
T ss_dssp ECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTT--
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccc--
Confidence 9999999999997654 699999999999999999999999 9999999999999999999999999999875322
Q ss_pred ccccccccCCccccCccccccCcc-CcccchhhHHHHHHHHHhCCCCcch-----------------------hhhhhhc
Q 041689 581 SMTQTQTLATIGYIAPEYGREGRV-FANGDVYSFGIMLMEIHSAKQQCVS-----------------------FVFNLAM 636 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~p~~~-----------------------~l~~l~~ 636 (652)
......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||.. .+.+++.
T Consensus 170 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~Li~ 248 (476)
T 2y94_A 170 -EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLK 248 (476)
T ss_dssp -CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCCTTCCHHHHHHHH
T ss_pred -ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCCccCCHHHHHHHH
Confidence 22344579999999999988766 6899999999999999999999643 3788999
Q ss_pred ccchhhhccccCccCC
Q 041689 637 ECTIESLELRINAKEI 652 (652)
Q Consensus 637 ~~l~~~p~~Rpt~~ei 652 (652)
+||..||++|||++||
T Consensus 249 ~~L~~dP~~Rpt~~ei 264 (476)
T 2y94_A 249 HMLQVDPMKRATIKDI 264 (476)
T ss_dssp HHTCSSTTTSCCHHHH
T ss_pred HHcCCCchhCcCHHHH
Confidence 9999999999999874
No 84
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.1e-41 Score=355.05 Aligned_cols=221 Identities=26% Similarity=0.264 Sum_probs=186.3
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccc---hhhhhHHHHHHH-HHhcCCCeeeeEEeeeecCCceEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCG---RAFKSFDIECEI-MKSIHYRNLVKIISSCSNEEFKEL 498 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~l 498 (652)
.++|++.+.||+|+||.||+|+.. +++.||+|+++.... .....+..|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357899999999999999999976 588999999976532 233455667766 567899999999999999999999
Q ss_pred EEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCC
Q 041689 499 VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE 578 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 578 (652)
||||+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999987654 688999999999999999999999 9999999999999999999999999999864221
Q ss_pred CCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch-----------------------hhhhhh
Q 041689 579 DQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS-----------------------FVFNLA 635 (652)
Q Consensus 579 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~-----------------------~l~~l~ 635 (652)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||.. .+.+++
T Consensus 193 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li 270 (373)
T 2r5t_A 193 --NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLL 270 (373)
T ss_dssp --CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCSSSCHHHHHHH
T ss_pred --CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Confidence 2233456799999999999999999999999999999999999999643 378899
Q ss_pred cccchhhhccccCcc
Q 041689 636 MECTIESLELRINAK 650 (652)
Q Consensus 636 ~~~l~~~p~~Rpt~~ 650 (652)
.+||+.||++||++.
T Consensus 271 ~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 271 EGLLQKDRTKRLGAK 285 (373)
T ss_dssp HHHTCSSGGGSTTTT
T ss_pred HHHcccCHHhCCCCC
Confidence 999999999999985
No 85
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.1e-41 Score=339.78 Aligned_cols=224 Identities=22% Similarity=0.333 Sum_probs=177.7
Q ss_pred hcCCCccceeccccceEEEEEEe-CCCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
.++|.+.+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35799999999999999999986 479999999997542 22346788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|||+++++|.+++......+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~- 165 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP- 165 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCC-
Confidence 999999999999987766799999999999999999999999 9999999999999999999999999999865321
Q ss_pred CccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch-----------------------hhhhhhc
Q 041689 580 QSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS-----------------------FVFNLAM 636 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~-----------------------~l~~l~~ 636 (652)
........||+.|+|||++.+..++.++||||+|+++|||++|+.||.. .+.+++.
T Consensus 166 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 244 (278)
T 3cok_A 166 -HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIH 244 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCCTTSCHHHHHHHH
T ss_pred -CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCccccCHHHHHHHH
Confidence 1122345689999999999988999999999999999999999999643 3688999
Q ss_pred ccchhhhccccCccCC
Q 041689 637 ECTIESLELRINAKEI 652 (652)
Q Consensus 637 ~~l~~~p~~Rpt~~ei 652 (652)
+||+.||++|||++||
T Consensus 245 ~~l~~dp~~Rps~~~~ 260 (278)
T 3cok_A 245 QLLRRNPADRLSLSSV 260 (278)
T ss_dssp HHSCSSGGGSCCHHHH
T ss_pred HHcccCHhhCCCHHHH
Confidence 9999999999999864
No 86
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=352.80 Aligned_cols=220 Identities=20% Similarity=0.274 Sum_probs=180.0
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 502 (652)
.++|++.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 467999999999999999999976 58899999997543 346688999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCC---CCcEEEecccCCccccCCC
Q 041689 503 MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDD---TMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~---~~~~kl~Dfg~~~~~~~~~ 579 (652)
+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++....
T Consensus 130 ~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~-- 203 (349)
T 2w4o_A 130 VTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH-- 203 (349)
T ss_dssp CCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCc--
Confidence 99999999987654 689999999999999999999999 9999999999999975 88999999999986522
Q ss_pred CccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch----------------------------hh
Q 041689 580 QSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS----------------------------FV 631 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~----------------------------~l 631 (652)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.. .+
T Consensus 204 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 282 (349)
T 2w4o_A 204 -QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNA 282 (349)
T ss_dssp ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHH
T ss_pred -ccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHH
Confidence 1223345689999999999999999999999999999999999999632 36
Q ss_pred hhhhcccchhhhccccCccCC
Q 041689 632 FNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 632 ~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+++.+||+.||++|||++|+
T Consensus 283 ~~li~~~L~~dP~~Rpt~~e~ 303 (349)
T 2w4o_A 283 KDLVRKLIVLDPKKRLTTFQA 303 (349)
T ss_dssp HHHHHTTSCSSGGGSCCHHHH
T ss_pred HHHHHHHccCChhhCcCHHHH
Confidence 789999999999999998764
No 87
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-41 Score=353.57 Aligned_cols=227 Identities=23% Similarity=0.377 Sum_probs=195.3
Q ss_pred HhcCCCccceeccccceEEEEEEe------CCCcEEEEEEeecc-cchhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCC
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRI------GDGMEVAVKVFHLQ-CGRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEE 494 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 494 (652)
..++|.+.+.||+|+||.||+|++ .++..||+|+++.. .....+.+.+|+++++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 457899999999999999999985 24668999999754 233456789999999999 8999999999999999
Q ss_pred ceEEEEEccCCCChhhhhhcCCC----------------------CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCC
Q 041689 495 FKELVLEHMPHGSLEKCLYSSNC----------------------ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLK 552 (652)
Q Consensus 495 ~~~lv~e~~~~g~L~~~l~~~~~----------------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlk 552 (652)
..++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ ||+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 99999999999999999976542 378899999999999999999999 99999999
Q ss_pred CCCeeeCCCCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch--
Q 041689 553 PSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS-- 629 (652)
Q Consensus 553 p~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~-- 629 (652)
|+||+++.++.+||+|||++................+|+.|+|||++.++.++.++|||||||++|||+| |+.||..
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999987644333333344567889999999998999999999999999999998 9988643
Q ss_pred -----------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 -----------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -----------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 325 (344)
T 1rjb_A 280 VDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNL 325 (344)
T ss_dssp CSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 37789999999999999999864
No 88
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-41 Score=354.52 Aligned_cols=230 Identities=26% Similarity=0.353 Sum_probs=197.6
Q ss_pred HHHHhcCCCccceeccccceEEEEEEeC------CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeec
Q 041689 420 VCRATYGFNENNLIGKGGFGTIYKSRIG------DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSN 492 (652)
Q Consensus 420 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 492 (652)
+....++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3445678999999999999999999864 35889999997653 3345678999999999999999999999999
Q ss_pred CCceEEEEEccCCCChhhhhhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEec
Q 041689 493 EEFKELVLEHMPHGSLEKCLYSSN-----------------------CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549 (652)
Q Consensus 493 ~~~~~lv~e~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~ 549 (652)
++..++||||+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 999999999999999999987642 3689999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc
Q 041689 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV 628 (652)
Q Consensus 550 dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~ 628 (652)
||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 278 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence 9999999999999999999999986533222222334567899999999998899999999999999999999 988853
Q ss_pred ------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++||
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~ 326 (343)
T 1luf_A 279 GMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSI 326 (343)
T ss_dssp TSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHH
Confidence 347889999999999999999764
No 89
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-41 Score=346.27 Aligned_cols=220 Identities=21% Similarity=0.221 Sum_probs=186.7
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCceEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC--GRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 500 (652)
++|++.+.||+|+||.||+|+.. +|+.||||++.... .........|+..+.++ +||||+++++++.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 46999999999999999999976 69999999986532 23334455566666555 8999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
||+ +++|.+++......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~--- 209 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT--- 209 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeeccc---
Confidence 999 6699998887666799999999999999999999999 999999999999999999999999999986532
Q ss_pred ccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCC----------------------cchhhhhhhccc
Q 041689 581 SMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQ----------------------CVSFVFNLAMEC 638 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p----------------------~~~~l~~l~~~~ 638 (652)
........||+.|+|||++.+ .++.++|||||||++|||++|..| ++..+.+++.+|
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 288 (311)
T 3p1a_A 210 AGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMM 288 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHHHHH
T ss_pred CCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHHHHH
Confidence 222334568999999998875 799999999999999999999665 234588999999
Q ss_pred chhhhccccCccCC
Q 041689 639 TIESLELRINAKEI 652 (652)
Q Consensus 639 l~~~p~~Rpt~~ei 652 (652)
|+.||++|||++||
T Consensus 289 L~~dP~~Rpt~~el 302 (311)
T 3p1a_A 289 LEPDPKLRATAEAL 302 (311)
T ss_dssp SCSSTTTSCCHHHH
T ss_pred cCCChhhCcCHHHH
Confidence 99999999999874
No 90
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.3e-41 Score=351.84 Aligned_cols=225 Identities=24% Similarity=0.373 Sum_probs=187.7
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcE----EEEEEeecc-cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGME----VAVKVFHLQ-CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKE 497 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 497 (652)
.++|++.+.||+|+||.||+|++. +++. ||+|.++.. .....+.+.+|++++++++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 356889999999999999999854 4443 588877543 2345578899999999999999999999998764 77
Q ss_pred EEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccC
Q 041689 498 LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 577 (652)
+|+||+++|+|.+++......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 99999999999999988777899999999999999999999999 999999999999999999999999999987644
Q ss_pred CCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch------------------------hhh
Q 041689 578 EDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS------------------------FVF 632 (652)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~------------------------~l~ 632 (652)
...........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.. .+.
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVY 249 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHH
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHHHH
Confidence 433333344557889999999999999999999999999999999 9998653 277
Q ss_pred hhhcccchhhhccccCccCC
Q 041689 633 NLAMECTIESLELRINAKEI 652 (652)
Q Consensus 633 ~l~~~~l~~~p~~Rpt~~ei 652 (652)
+++.+||+.||++|||++||
T Consensus 250 ~li~~~l~~~p~~Rps~~el 269 (327)
T 3poz_A 250 MIMVKCWMIDADSRPKFREL 269 (327)
T ss_dssp HHHHHHTCSCGGGSCCHHHH
T ss_pred HHHHHHcCCChhhCCCHHHH
Confidence 89999999999999999764
No 91
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6.5e-41 Score=339.39 Aligned_cols=222 Identities=22% Similarity=0.346 Sum_probs=195.7
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 468999999999999999999865 58999999997552 334567889999999999999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCc---EEEecccCCccccC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMV---AHLSDFGITKLLIG 577 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~---~kl~Dfg~~~~~~~ 577 (652)
||+++++|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||.+.....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999998887654 689999999999999999999999 9999999999999976555 99999999986532
Q ss_pred CCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCc---------------------------chh
Q 041689 578 EDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQC---------------------------VSF 630 (652)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~---------------------------~~~ 630 (652)
........||+.|+|||++.+..++.++||||+|+++|+|++|+.|| +..
T Consensus 161 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T 3kk8_A 161 ---SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 237 (284)
T ss_dssp ---SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHH
T ss_pred ---CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHH
Confidence 22233456899999999999999999999999999999999999985 334
Q ss_pred hhhhhcccchhhhccccCccCC
Q 041689 631 VFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 631 l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+.+++.+||+.||++|||++|+
T Consensus 238 ~~~li~~~l~~dp~~Rps~~~~ 259 (284)
T 3kk8_A 238 AKSLIDSMLTVNPKKRITADQA 259 (284)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHH
T ss_pred HHHHHHHHcccChhhCCCHHHH
Confidence 7899999999999999999864
No 92
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=353.78 Aligned_cols=223 Identities=19% Similarity=0.339 Sum_probs=188.4
Q ss_pred hcCCCccceeccccceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCC--CeeeeEEeeeecCCceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHY--RNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv 499 (652)
.++|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++| |||+++++++..++..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45699999999999999999998889999999997542 3345678999999999976 9999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|| +.+++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||+++......
T Consensus 88 ~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp EC-CCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred Ee-CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 99 56789999998765 689999999999999999999999 999999999999997 5689999999998764333
Q ss_pred CccccccccCCccccCcccccc-----------CccCcccchhhHHHHHHHHHhCCCCcch-------------------
Q 041689 580 QSMTQTQTLATIGYIAPEYGRE-----------GRVFANGDVYSFGIMLMEIHSAKQQCVS------------------- 629 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~vl~elltg~~p~~~------------------- 629 (652)
.........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 241 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCC
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccC
Confidence 3333345679999999999865 6788999999999999999999999753
Q ss_pred -------hhhhhhcccchhhhccccCccCC
Q 041689 630 -------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 242 ~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~ 271 (343)
T 3dbq_A 242 FPDIPEKDLQDVLKCCLKRDPKQRISIPEL 271 (343)
T ss_dssp CCCCSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CcccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 37889999999999999999764
No 93
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.9e-41 Score=339.37 Aligned_cols=220 Identities=20% Similarity=0.286 Sum_probs=172.9
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57999999999999999999864 68999999997542 233567889999999999999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
||+ ++++.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||++++++.+||+|||++......
T Consensus 93 e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 165 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-- 165 (275)
T ss_dssp ECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred hhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCc--
Confidence 999 668888777654 689999999999999999999999 9999999999999999999999999999865322
Q ss_pred ccccccccCCccccCccccccCcc-CcccchhhHHHHHHHHHhCCCCcch-----------------------hhhhhhc
Q 041689 581 SMTQTQTLATIGYIAPEYGREGRV-FANGDVYSFGIMLMEIHSAKQQCVS-----------------------FVFNLAM 636 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~p~~~-----------------------~l~~l~~ 636 (652)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.. .+.+++.
T Consensus 166 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 244 (275)
T 2eue_A 166 -NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIK 244 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHH
T ss_pred -ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHH
Confidence 22234568999999999887765 6899999999999999999999643 3788999
Q ss_pred ccchhhhccccCccCC
Q 041689 637 ECTIESLELRINAKEI 652 (652)
Q Consensus 637 ~~l~~~p~~Rpt~~ei 652 (652)
+||+.||++|||++|+
T Consensus 245 ~~l~~dP~~Rps~~e~ 260 (275)
T 2eue_A 245 RMLIVNPLNRISIHEI 260 (275)
T ss_dssp HHSCSSGGGSCCHHHH
T ss_pred HHhhcCHhHCCCHHHH
Confidence 9999999999999874
No 94
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.1e-41 Score=354.64 Aligned_cols=222 Identities=22% Similarity=0.222 Sum_probs=186.4
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 501 (652)
..++|.+.+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 3467999999999999999999976 68999999997543 234678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCc--EEEecccCCccccCCC
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMV--AHLSDFGITKLLIGED 579 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~--~kl~Dfg~~~~~~~~~ 579 (652)
|+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||+++...
T Consensus 97 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~--- 169 (361)
T 3uc3_A 97 YASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV--- 169 (361)
T ss_dssp CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred eCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccc---
Confidence 999999999987654 699999999999999999999999 9999999999999987665 9999999997432
Q ss_pred CccccccccCCccccCccccccCccCcc-cchhhHHHHHHHHHhCCCCcch-----------------------------
Q 041689 580 QSMTQTQTLATIGYIAPEYGREGRVFAN-GDVYSFGIMLMEIHSAKQQCVS----------------------------- 629 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwslG~vl~elltg~~p~~~----------------------------- 629 (652)
.........||+.|+|||++.+..++.+ +||||+||++|||++|+.||..
T Consensus 170 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 249 (361)
T 3uc3_A 170 LHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISP 249 (361)
T ss_dssp -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCH
T ss_pred ccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCH
Confidence 1222334569999999999988887755 8999999999999999999643
Q ss_pred hhhhhhcccchhhhccccCccCC
Q 041689 630 FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||..||++|||++||
T Consensus 250 ~~~~li~~~L~~dP~~Rps~~el 272 (361)
T 3uc3_A 250 ECCHLISRIFVADPATRISIPEI 272 (361)
T ss_dssp HHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHHccCChhHCcCHHHH
Confidence 36789999999999999999864
No 95
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.5e-41 Score=356.32 Aligned_cols=224 Identities=24% Similarity=0.316 Sum_probs=182.6
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHHhcC-CCeeeeEEeeeecCC--ce
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIH-YRNLVKIISSCSNEE--FK 496 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~--~~ 496 (652)
..++|++.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+.+++++. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999999864 6899999998543 2344567789999999997 999999999997543 78
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcccc
Q 041689 497 ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576 (652)
Q Consensus 497 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 576 (652)
|+||||++ ++|.+++... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.+.
T Consensus 87 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99999998 5999988764 589999999999999999999999 99999999999999999999999999998653
Q ss_pred CCC-------------------CccccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCCcc--------
Q 041689 577 GED-------------------QSMTQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQCV-------- 628 (652)
Q Consensus 577 ~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~-------- 628 (652)
... ........+||+.|+|||++.+ ..++.++||||+||++|||++|++||.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 240 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 211 1112234579999999999876 678999999999999999999999872
Q ss_pred --------------------------------------------------------------hhhhhhhcccchhhhccc
Q 041689 629 --------------------------------------------------------------SFVFNLAMECTIESLELR 646 (652)
Q Consensus 629 --------------------------------------------------------------~~l~~l~~~~l~~~p~~R 646 (652)
..+.+++.+||+.||++|
T Consensus 241 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R 320 (388)
T 3oz6_A 241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR 320 (388)
T ss_dssp HHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccC
Confidence 346789999999999999
Q ss_pred cCccCC
Q 041689 647 INAKEI 652 (652)
Q Consensus 647 pt~~ei 652 (652)
||++|+
T Consensus 321 ~t~~e~ 326 (388)
T 3oz6_A 321 ISANDA 326 (388)
T ss_dssp CCHHHH
T ss_pred CCHHHH
Confidence 999864
No 96
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6.4e-41 Score=338.17 Aligned_cols=221 Identities=23% Similarity=0.257 Sum_probs=195.9
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 502 (652)
.++|++.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 356999999999999999999875 5788999999876556677899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee---CCCCcEEEecccCCccccCCC
Q 041689 503 MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
+++++|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||++......
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~- 162 (277)
T 3f3z_A 88 CTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG- 162 (277)
T ss_dssp CCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT-
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc-
Confidence 99999999887654 689999999999999999999999 99999999999999 78899999999999865322
Q ss_pred CccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc---------------------------hhhh
Q 041689 580 QSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV---------------------------SFVF 632 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~---------------------------~~l~ 632 (652)
.......||+.|+|||++.+ .++.++||||+|+++|||++|+.||. ..+.
T Consensus 163 --~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (277)
T 3f3z_A 163 --KMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAE 239 (277)
T ss_dssp --SCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHH
T ss_pred --cchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHH
Confidence 22344568999999998765 48999999999999999999999963 3478
Q ss_pred hhhcccchhhhccccCccCC
Q 041689 633 NLAMECTIESLELRINAKEI 652 (652)
Q Consensus 633 ~l~~~~l~~~p~~Rpt~~ei 652 (652)
+++.+||+.||++|||+.|+
T Consensus 240 ~li~~~l~~dp~~R~s~~~~ 259 (277)
T 3f3z_A 240 SLIRRLLTKSPKQRITSLQA 259 (277)
T ss_dssp HHHHHHTCSSTTTSCCHHHH
T ss_pred HHHHHHccCChhhCcCHHHH
Confidence 89999999999999998763
No 97
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.4e-41 Score=347.73 Aligned_cols=226 Identities=22% Similarity=0.347 Sum_probs=196.7
Q ss_pred hcCCCccceeccccceEEEEEEe------CCCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCce
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI------GDGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFK 496 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 496 (652)
..+|.+.+.||+|+||.||+|.. .+++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 46788999999999999999975 245789999997543 34456788999999999999999999999999999
Q ss_pred EEEEEccCCCChhhhhhcCCC-----------------------CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCC
Q 041689 497 ELVLEHMPHGSLEKCLYSSNC-----------------------ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKP 553 (652)
Q Consensus 497 ~lv~e~~~~g~L~~~l~~~~~-----------------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp 553 (652)
++||||+++++|.+++..... .+++.++..++.|++.||+|||++ +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999976432 378999999999999999999999 999999999
Q ss_pred CCeeeCCCCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc----
Q 041689 554 SNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV---- 628 (652)
Q Consensus 554 ~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~---- 628 (652)
+||++++++.+||+|||+++...............+++.|+|||++.+..++.++||||+||++|||++ |+.||.
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987643333233344557889999999998899999999999999999999 988854
Q ss_pred --------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 --------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 --------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++||
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l 302 (314)
T 2ivs_A 259 ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302 (314)
T ss_dssp GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 337899999999999999999874
No 98
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=6.5e-41 Score=341.80 Aligned_cols=223 Identities=14% Similarity=0.155 Sum_probs=196.2
Q ss_pred hcCCCccceeccccceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCceEEEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 501 (652)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+++++++ +|++++++++++..+...++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 45799999999999999999986 479999999986542 345788999999999 79999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCc-----EEEecccCCcccc
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMV-----AHLSDFGITKLLI 576 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~-----~kl~Dfg~~~~~~ 576 (652)
|+ +++|.+++......+++.++..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||+++...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 8999999987666799999999999999999999999 9999999999999987766 9999999998764
Q ss_pred CCCCc-----cccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch----------------------
Q 041689 577 GEDQS-----MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS---------------------- 629 (652)
Q Consensus 577 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~---------------------- 629 (652)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL 242 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH
Confidence 33221 112345699999999999999999999999999999999999999744
Q ss_pred ---------hhhhhhcccchhhhccccCccCC
Q 041689 630 ---------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ---------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 243 ~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l 274 (298)
T 1csn_A 243 RELCAGFPEEFYKYMHYARNLAFDATPDYDYL 274 (298)
T ss_dssp HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHH
T ss_pred HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHH
Confidence 37889999999999999999864
No 99
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=350.90 Aligned_cols=222 Identities=21% Similarity=0.276 Sum_probs=186.4
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccc-hhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEc
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCG-RAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 502 (652)
++|.+.+.||+|+||.||+|+.. +++.||+|+++.... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57899999999999999999875 689999999975432 2223456799999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCcc
Q 041689 503 MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSM 582 (652)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 582 (652)
+++ +|.+++......+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.... ...
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~--~~~ 155 (324)
T 3mtl_A 82 LDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSI--PTK 155 (324)
T ss_dssp CSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccC--Ccc
Confidence 974 99999887776799999999999999999999999 999999999999999999999999999975422 122
Q ss_pred ccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCCcch--------------------------------
Q 041689 583 TQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQCVS-------------------------------- 629 (652)
Q Consensus 583 ~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~-------------------------------- 629 (652)
......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 235 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhc
Confidence 2334568999999999876 5689999999999999999999999733
Q ss_pred ---------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ---------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ---------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 279 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDA 279 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHH
Confidence 34689999999999999999874
No 100
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.4e-41 Score=351.34 Aligned_cols=224 Identities=23% Similarity=0.373 Sum_probs=190.7
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcE----EEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGME----VAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKEL 498 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 498 (652)
.+|++.+.||+|+||.||+|++. +++. ||+|.+.... ......+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 57889999999999999999864 4544 7777775432 234456788999999999999999999986 456889
Q ss_pred EEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCC
Q 041689 499 VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE 578 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 578 (652)
||||+++|+|.+++......+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 9999999999999987666789999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch------------------------hhhh
Q 041689 579 DQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS------------------------FVFN 633 (652)
Q Consensus 579 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~------------------------~l~~ 633 (652)
..........+++.|+|||++.++.++.++|||||||++|||++ |+.||.. .+.+
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYM 248 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTTTTH
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHHHHH
Confidence 43334455568889999999999999999999999999999999 9999643 3778
Q ss_pred hhcccchhhhccccCccCC
Q 041689 634 LAMECTIESLELRINAKEI 652 (652)
Q Consensus 634 l~~~~l~~~p~~Rpt~~ei 652 (652)
++.+||..||++|||++||
T Consensus 249 li~~~l~~dp~~Rps~~el 267 (325)
T 3kex_A 249 VMVKCWMIDENIRPTFKEL 267 (325)
T ss_dssp HHHHHTCSCTTTSCCHHHH
T ss_pred HHHHHcCCChhhCcCHHHH
Confidence 9999999999999999864
No 101
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=4.3e-41 Score=339.84 Aligned_cols=221 Identities=24% Similarity=0.308 Sum_probs=192.5
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
.++|++.+.||+|+||.||+|+.. ++..||+|++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467999999999999999999865 57889999996542 22346788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 88 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~--- 160 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP--- 160 (279)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC---
Confidence 99999999999887654 689999999999999999999999 99999999999999999999999999986542
Q ss_pred CccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch-----------------------hhhhhhc
Q 041689 580 QSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS-----------------------FVFNLAM 636 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~-----------------------~l~~l~~ 636 (652)
........|++.|+|||++.+..++.++||||+|+++|||++|+.||.. .+.+++.
T Consensus 161 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 239 (279)
T 3fdn_A 161 -SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 239 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHH
T ss_pred -cccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCCcCCHHHHHHHH
Confidence 1222345689999999999999999999999999999999999999543 3788999
Q ss_pred ccchhhhccccCccCC
Q 041689 637 ECTIESLELRINAKEI 652 (652)
Q Consensus 637 ~~l~~~p~~Rpt~~ei 652 (652)
+||+.||++|||++||
T Consensus 240 ~~l~~~p~~Rps~~e~ 255 (279)
T 3fdn_A 240 RLLKHNPSQRPMLREV 255 (279)
T ss_dssp HHCCSSGGGSCCHHHH
T ss_pred HHhccChhhCCCHHHH
Confidence 9999999999999874
No 102
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.6e-41 Score=344.75 Aligned_cols=220 Identities=25% Similarity=0.329 Sum_probs=192.8
Q ss_pred hcCCCccceeccccceEEEEEEeCC-C-------cEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGD-G-------MEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEF 495 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 495 (652)
.++|.+.+.||+|+||.||+|+... + ..||+|++........+.+.+|++++++++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3578899999999999999998543 3 4799999977666667889999999999999999999999999999
Q ss_pred eEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCc--------EEEe
Q 041689 496 KELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMV--------AHLS 567 (652)
Q Consensus 496 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~--------~kl~ 567 (652)
.++||||+++|+|.+++......+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeec
Confidence 9999999999999999988765699999999999999999999999 9999999999999988876 9999
Q ss_pred cccCCccccCCCCccccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCC--------------------
Q 041689 568 DFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQ-------------------- 626 (652)
Q Consensus 568 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p-------------------- 626 (652)
|||.+.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|..|
T Consensus 164 Dfg~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (289)
T 4fvq_A 164 DPGISITVL------PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQL 237 (289)
T ss_dssp CCCSCTTTS------CHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC
T ss_pred cCccccccc------CccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCC
Confidence 999987541 1223457889999999887 6789999999999999999996443
Q ss_pred ---cchhhhhhhcccchhhhccccCccCC
Q 041689 627 ---CVSFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 627 ---~~~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
++..+.+++.+||+.||++|||++||
T Consensus 238 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l 266 (289)
T 4fvq_A 238 PAPKAAELANLINNCMDYEPDHRPSFRAI 266 (289)
T ss_dssp CCCSSCTTHHHHHHHSCSSGGGSCCHHHH
T ss_pred CCCCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 23348899999999999999999874
No 103
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=7.8e-41 Score=345.09 Aligned_cols=221 Identities=21% Similarity=0.317 Sum_probs=195.6
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccch------hhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGR------AFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKE 497 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 497 (652)
++|++.+.||+|+||.||+|+.. +|+.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 46899999999999999999875 6899999999754321 3567899999999999999999999999999999
Q ss_pred EEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCC----cEEEecccCCc
Q 041689 498 LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM----VAHLSDFGITK 573 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~----~~kl~Dfg~~~ 573 (652)
+||||+++++|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++ .+||+|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp EEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 9999999999999997654 689999999999999999999999 999999999999999887 79999999998
Q ss_pred cccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch------------------------
Q 041689 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS------------------------ 629 (652)
Q Consensus 574 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~------------------------ 629 (652)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 168 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 244 (321)
T 2a2a_A 168 EIEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSH 244 (321)
T ss_dssp ECCTT---CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTT
T ss_pred ecCcc---ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcc
Confidence 65322 222345689999999999999999999999999999999999999632
Q ss_pred ---hhhhhhcccchhhhccccCccCC
Q 041689 630 ---FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ---~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||..||++|||++|+
T Consensus 245 ~~~~~~~li~~~l~~dp~~Rps~~e~ 270 (321)
T 2a2a_A 245 TSELAKDFIRKLLVKETRKRLTIQEA 270 (321)
T ss_dssp CCHHHHHHHHTTSCSSTTTSCCHHHH
T ss_pred cCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 26889999999999999999864
No 104
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.8e-41 Score=343.31 Aligned_cols=220 Identities=26% Similarity=0.382 Sum_probs=185.6
Q ss_pred hcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHh--cCCCeeeeEEeeeec----CCceE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKS--IHYRNLVKIISSCSN----EEFKE 497 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~----~~~~~ 497 (652)
.++|++.+.||+|+||.||+|+. +++.||||++... ....+..|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46799999999999999999988 6899999998654 33455667777766 799999999998654 34689
Q ss_pred EEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHH--------cCCCCCeEecCCCCCCeeeCCCCcEEEecc
Q 041689 498 LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH--------FNFLVPVIHCDLKPSNVLLDDTMVAHLSDF 569 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~iiH~dlkp~NIll~~~~~~kl~Df 569 (652)
+||||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+||
T Consensus 83 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCC
T ss_pred EehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeC
Confidence 999999999999999654 5899999999999999999999 77 9999999999999999999999999
Q ss_pred cCCccccCCCCcc--ccccccCCccccCccccccC------ccCcccchhhHHHHHHHHHhC----------CCCcch--
Q 041689 570 GITKLLIGEDQSM--TQTQTLATIGYIAPEYGREG------RVFANGDVYSFGIMLMEIHSA----------KQQCVS-- 629 (652)
Q Consensus 570 g~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~vl~elltg----------~~p~~~-- 629 (652)
|+++......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||..
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9998654332221 12334799999999998876 566799999999999999999 777532
Q ss_pred ---------------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ---------------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ---------------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i 293 (301)
T 3q4u_A 238 PNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293 (301)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred CCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHH
Confidence 26789999999999999999874
No 105
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.2e-41 Score=349.61 Aligned_cols=228 Identities=23% Similarity=0.395 Sum_probs=180.0
Q ss_pred HHhcCCCccceeccccceEEEEEEeCC-C---cEEEEEEeecc--cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCc
Q 041689 422 RATYGFNENNLIGKGGFGTIYKSRIGD-G---MEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEF 495 (652)
Q Consensus 422 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 495 (652)
...++|++.+.||+|+||.||+|++.. + ..||||+++.. .....+.+.+|++++++++||||+++++++...+.
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345679999999999999999998654 3 27999999754 34456789999999999999999999999987765
Q ss_pred e------EEEEEccCCCChhhhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcE
Q 041689 496 K------ELVLEHMPHGSLEKCLYSSN-----CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVA 564 (652)
Q Consensus 496 ~------~lv~e~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~ 564 (652)
. ++||||+++|+|.+++.... ..+++.++..++.|++.||+|||++ ||+||||||+||++++++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 4 89999999999999886432 2589999999999999999999999 99999999999999999999
Q ss_pred EEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch--------------
Q 041689 565 HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS-------------- 629 (652)
Q Consensus 565 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~-------------- 629 (652)
||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |+.||..
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~ 256 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN 256 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCC
Confidence 9999999987643332233334457889999999999999999999999999999999 8888643
Q ss_pred ----------hhhhhhcccchhhhccccCccCC
Q 041689 630 ----------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ----------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||+.||
T Consensus 257 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 289 (323)
T 3qup_A 257 RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCL 289 (323)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred CCCCCCccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 37899999999999999997753
No 106
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.1e-41 Score=346.75 Aligned_cols=226 Identities=21% Similarity=0.322 Sum_probs=197.1
Q ss_pred hcCCCccceeccccceEEEEEEe------CCCcEEEEEEeecccc-hhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI------GDGMEVAVKVFHLQCG-RAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEF 495 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 495 (652)
.++|.+.+.||+|+||.||+|++ .+++.||+|+++.... ...+.+.+|+++++++ +||||+++++++..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 45788999999999999999974 3478899999975532 3457789999999999 99999999999999999
Q ss_pred eEEEEEccCCCChhhhhhcCCC-----------------CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee
Q 041689 496 KELVLEHMPHGSLEKCLYSSNC-----------------ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL 558 (652)
Q Consensus 496 ~~lv~e~~~~g~L~~~l~~~~~-----------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll 558 (652)
.++||||+++|+|.+++..... .+++.++..++.|++.||+|||++ ||+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 9999999999999999876542 489999999999999999999999 99999999999999
Q ss_pred CCCCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch--------
Q 041689 559 DDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS-------- 629 (652)
Q Consensus 559 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~-------- 629 (652)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~ 258 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 258 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHH
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHH
Confidence 9999999999999987644333223334557889999999999999999999999999999999 8888533
Q ss_pred -----------------hhhhhhcccchhhhccccCccCC
Q 041689 630 -----------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -----------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 259 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 298 (313)
T 1t46_A 259 KMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 298 (313)
T ss_dssp HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 37889999999999999999874
No 107
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.8e-40 Score=357.02 Aligned_cols=308 Identities=19% Similarity=0.226 Sum_probs=256.7
Q ss_pred ceeeeceeEeccCCCcCCccCCCCC-CCCCCCEEECCCCcCcc-cCCccccCCCCCCEEEcCCCcCeeccCCCccccccC
Q 041689 2 FSISIGKLELNVDDIESPCEIPSEI-NPHNLEELLLGQNNLVG-VVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTS 79 (652)
Q Consensus 2 ~~~~l~~l~l~~~~~~~~~~ip~~~-~~~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 79 (652)
+|.+++.|+|+.|.+.. ..|..+ ++++|++|+|++|.+.+ +.+..|.++++|++|+|++|++++..+.
T Consensus 28 l~~~l~~L~Ls~n~i~~--~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~-------- 97 (455)
T 3v47_A 28 LPAHVNYVDLSLNSIAE--LNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETG-------- 97 (455)
T ss_dssp CCTTCCEEECCSSCCCE--ECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTT--------
T ss_pred CCCccCEEEecCCccCc--CChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChh--------
Confidence 46789999999999984 357767 89999999999999974 4577899999999999999999877653
Q ss_pred CCCCcccccccCCCCCCcEEEcccCCCcccCCc-cchhcccccCcEEEccCCcccccCCcc-ccCCCCCCEEEecCcccc
Q 041689 80 STPELSFLSSLSNCKSLVVFLLSNNPLNGILPR-MSIGNLSHSLEIFDMSKCNVSGGIPEE-IGNLTNLTAIYLGGNKLN 157 (652)
Q Consensus 80 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~~~l~~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~ 157 (652)
.|.++++|++|+|++|++++..+. ..+..+++ |++|+|++|++++..|.. |.++++|++|+|++|+++
T Consensus 98 ---------~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 98 ---------AFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTS-LEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp ---------TTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTT-CCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred ---------hccCcccCCEEeCCCCCCCccccCcccccCccc-CCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 466777777777777777653222 13556665 777777777777666655 677777777777777777
Q ss_pred ccCCccccC----------------------------------CCCCcEEecccCccccccCccccC-------------
Q 041689 158 GSIPFTLRE----------------------------------LQKLQYVGLKDNKLEGTIPYDIFR------------- 190 (652)
Q Consensus 158 ~~~~~~~~~----------------------------------l~~L~~L~L~~N~l~~~~~~~~~~------------- 190 (652)
+..+..+.. +++|++|++++|++++..|..+..
T Consensus 168 ~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~ 247 (455)
T 3v47_A 168 SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILS 247 (455)
T ss_dssp CCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECT
T ss_pred ccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeec
Confidence 666655544 378999999999988766654432
Q ss_pred --------------------------CCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC--CCCCcccCCCCccce
Q 041689 191 --------------------------LVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND--GPLPLEIGNLKVLIG 242 (652)
Q Consensus 191 --------------------------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~--~~~~~~~~~l~~L~~ 242 (652)
.++|+.|++++|++++..|..|..+++|++|+|++|. ...|..+.++++|+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 327 (455)
T 3v47_A 248 NSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLK 327 (455)
T ss_dssp TCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCE
Confidence 2589999999999999999999999999999999997 345668999999999
Q ss_pred EecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcC
Q 041689 243 IDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKL 322 (652)
Q Consensus 243 L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 322 (652)
|++++|.+++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..+..+++|+.|++++|++
T Consensus 328 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 407 (455)
T 3v47_A 328 LNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 407 (455)
T ss_dssp EECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCc
Confidence 99999999999899999999999999999999988899999999999999999999988888889999999999999999
Q ss_pred cccCCCC
Q 041689 323 EGEIPKG 329 (652)
Q Consensus 323 ~~~~p~~ 329 (652)
+|.+|..
T Consensus 408 ~~~~~~~ 414 (455)
T 3v47_A 408 DCSCPRI 414 (455)
T ss_dssp CCCTTTT
T ss_pred ccCCCcc
Confidence 9999864
No 108
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.6e-41 Score=350.12 Aligned_cols=218 Identities=24% Similarity=0.319 Sum_probs=191.4
Q ss_pred cCCCccceeccccceEEEEEEe-CCCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
..|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4488899999999999999986 478999999997542 233467889999999999999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
||++ |++.+++......+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++....
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~--- 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--- 206 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS---
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC---
Confidence 9997 588888866555799999999999999999999999 999999999999999999999999999986521
Q ss_pred ccccccccCCccccCccccc---cCccCcccchhhHHHHHHHHHhCCCCcc-------------------------hhhh
Q 041689 581 SMTQTQTLATIGYIAPEYGR---EGRVFANGDVYSFGIMLMEIHSAKQQCV-------------------------SFVF 632 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~-------------------------~~l~ 632 (652)
.....||+.|+|||++. .+.++.++|||||||++|||++|+.||. ..+.
T Consensus 207 ---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (348)
T 1u5q_A 207 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFR 283 (348)
T ss_dssp ---BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHH
T ss_pred ---CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHH
Confidence 23456899999999874 5678999999999999999999999853 2367
Q ss_pred hhhcccchhhhccccCccCC
Q 041689 633 NLAMECTIESLELRINAKEI 652 (652)
Q Consensus 633 ~l~~~~l~~~p~~Rpt~~ei 652 (652)
+++.+||+.||++|||++||
T Consensus 284 ~li~~~l~~dP~~Rps~~~l 303 (348)
T 1u5q_A 284 NFVDSCLQKIPQDRPTSEVL 303 (348)
T ss_dssp HHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHcccChhhCcCHHHH
Confidence 89999999999999999864
No 109
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.3e-41 Score=344.18 Aligned_cols=222 Identities=24% Similarity=0.290 Sum_probs=188.3
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 501 (652)
++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57999999999999999999975 58999999986542 2335678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCc
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 581 (652)
|++++++.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+...... .
T Consensus 83 ~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 156 (311)
T 4agu_A 83 YCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP--S 156 (311)
T ss_dssp CCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc--c
Confidence 999999998876554 689999999999999999999999 9999999999999999999999999999865322 2
Q ss_pred cccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCCcchh------------------------------
Q 041689 582 MTQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQCVSF------------------------------ 630 (652)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~------------------------------ 630 (652)
.......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence 22334568999999999876 56899999999999999999999986432
Q ss_pred ------------------------hhhhhcccchhhhccccCccCC
Q 041689 631 ------------------------VFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 631 ------------------------l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+.+++.+||+.||++|||++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 282 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQL 282 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHH
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHH
Confidence 5579999999999999999874
No 110
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=8.3e-41 Score=342.82 Aligned_cols=223 Identities=27% Similarity=0.353 Sum_probs=188.8
Q ss_pred HhcCCCccceeccccceEEEEEEe-CCCcEEEEEEeeccc-----chhhhhHHHHHHHHHhcC---CCeeeeEEeeeecC
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQC-----GRAFKSFDIECEIMKSIH---YRNLVKIISSCSNE 493 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~ 493 (652)
..++|++.+.||+|+||.||+|++ .+++.||+|+++... ......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 457899999999999999999996 468999999997432 112346677888877764 99999999998765
Q ss_pred C-----ceEEEEEccCCCChhhhhhcCCC-CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEe
Q 041689 494 E-----FKELVLEHMPHGSLEKCLYSSNC-ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLS 567 (652)
Q Consensus 494 ~-----~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~ 567 (652)
. ..++||||+++ +|.+++..... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 4 57899999975 99999876553 489999999999999999999999 99999999999999999999999
Q ss_pred cccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch------------------
Q 041689 568 DFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS------------------ 629 (652)
Q Consensus 568 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~------------------ 629 (652)
|||+++.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 163 Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 239 (308)
T 3g33_A 163 DFGLARIYSY---QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239 (308)
T ss_dssp SCSCTTTSTT---CCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred eCccccccCC---CcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 9999986532 2223456789999999999999999999999999999999999999732
Q ss_pred --------------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 --------------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 --------------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 294 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRA 294 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHH
Confidence 24679999999999999999864
No 111
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.2e-41 Score=338.30 Aligned_cols=224 Identities=27% Similarity=0.369 Sum_probs=197.3
Q ss_pred hcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEcc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHM 503 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 503 (652)
..+|++.+.||+|+||.||+|+..+++.||+|+++.... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 357889999999999999999988889999999976533 3467899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCccc
Q 041689 504 PHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMT 583 (652)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 583 (652)
++++|.+++......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.++..... ....
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~-~~~~ 161 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTS 161 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH-HHHS
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc-cccc
Confidence 99999999987766789999999999999999999999 9999999999999999999999999999865221 1111
Q ss_pred cccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------hhhhhhhccc
Q 041689 584 QTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------SFVFNLAMEC 638 (652)
Q Consensus 584 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~~l~~l~~~~ 638 (652)
.....+++.|+|||++.+..++.++||||+|+++|||++ |+.||. ..+.+++.+|
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~ 241 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC 241 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHH
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHHHH
Confidence 233457788999999988899999999999999999999 888864 2378899999
Q ss_pred chhhhccccCccCC
Q 041689 639 TIESLELRINAKEI 652 (652)
Q Consensus 639 l~~~p~~Rpt~~ei 652 (652)
|+.||++|||++|+
T Consensus 242 l~~~p~~Rps~~~l 255 (267)
T 3t9t_A 242 WRERPEDRPAFSRL 255 (267)
T ss_dssp TCSSGGGSCCHHHH
T ss_pred ccCChhhCcCHHHH
Confidence 99999999999864
No 112
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.8e-41 Score=348.31 Aligned_cols=224 Identities=22% Similarity=0.358 Sum_probs=186.5
Q ss_pred hcCCCccceeccccceEEEEEEe-CCCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCc----
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEF---- 495 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 495 (652)
.++|++.+.||+|+||.||+|++ .+++.||||+++... ......+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 36799999999999999999986 478999999997642 2334578899999999999999999999876543
Q ss_pred eEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccc
Q 041689 496 KELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL 575 (652)
Q Consensus 496 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 575 (652)
.|+||||+++++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 499999999999999987654 689999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCc-cccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc--------------------------
Q 041689 576 IGEDQS-MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV-------------------------- 628 (652)
Q Consensus 576 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~-------------------------- 628 (652)
...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 246 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTC
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCC
Confidence 332221 12234568999999999999999999999999999999999999964
Q ss_pred -hhhhhhhcccchhhhccccCccC
Q 041689 629 -SFVFNLAMECTIESLELRINAKE 651 (652)
Q Consensus 629 -~~l~~l~~~~l~~~p~~Rpt~~e 651 (652)
..+.+++.+||+.||++||++.+
T Consensus 247 ~~~l~~li~~~l~~dP~~R~~~~~ 270 (311)
T 3ork_A 247 SADLDAVVLKALAKNPENRYQTAA 270 (311)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHH
T ss_pred CHHHHHHHHHHHhcCHhhChhhHH
Confidence 23788999999999999998764
No 113
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=6.5e-41 Score=344.90 Aligned_cols=224 Identities=22% Similarity=0.291 Sum_probs=188.8
Q ss_pred cCCCcc-ceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCceEEEEE
Q 041689 425 YGFNEN-NLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 425 ~~y~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 501 (652)
++|.+. +.||+|+||.||+|+.. +++.||||+++.........+.+|++++.++ +||||+++++++.+++..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 567774 78999999999999864 6899999999876555567889999999985 79999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCc---EEEecccCCccccCC
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMV---AHLSDFGITKLLIGE 578 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~---~kl~Dfg~~~~~~~~ 578 (652)
|+++++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++......
T Consensus 92 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred cCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 999999999987654 689999999999999999999999 9999999999999987765 999999998765321
Q ss_pred CC-----ccccccccCCccccCcccccc-----CccCcccchhhHHHHHHHHHhCCCCcch-------------------
Q 041689 579 DQ-----SMTQTQTLATIGYIAPEYGRE-----GRVFANGDVYSFGIMLMEIHSAKQQCVS------------------- 629 (652)
Q Consensus 579 ~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~vl~elltg~~p~~~------------------- 629 (652)
.. ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 11 111223458999999999875 5688999999999999999999999732
Q ss_pred -----------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 -----------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -----------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 248 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~ 293 (316)
T 2ac3_A 248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQV 293 (316)
T ss_dssp HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred HHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHH
Confidence 36789999999999999999874
No 114
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4.7e-41 Score=355.66 Aligned_cols=222 Identities=19% Similarity=0.339 Sum_probs=188.7
Q ss_pred cCCCccceeccccceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHHhcC--CCeeeeEEeeeecCCceEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIH--YRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~ 500 (652)
.+|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++ ||||+++++++...+..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4599999999999999999998889999999997542 344577899999999996 599999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
| +.+++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||+++.+.....
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 56789999998765 788999999999999999999999 999999999999996 57899999999987643332
Q ss_pred ccccccccCCccccCcccccc-----------CccCcccchhhHHHHHHHHHhCCCCcch--------------------
Q 041689 581 SMTQTQTLATIGYIAPEYGRE-----------GRVFANGDVYSFGIMLMEIHSAKQQCVS-------------------- 629 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~vl~elltg~~p~~~-------------------- 629 (652)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~ 289 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 289 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCC
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCC
Confidence 223345679999999999865 4688999999999999999999999743
Q ss_pred ------hhhhhhcccchhhhccccCccCC
Q 041689 630 ------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||..||++|||++||
T Consensus 290 ~~~~~~~~~~li~~~L~~dP~~Rps~~el 318 (390)
T 2zmd_A 290 PDIPEKDLQDVLKCCLKRDPKQRISIPEL 318 (390)
T ss_dssp CCCSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CccchHHHHHHHHHHcccChhhCCCHHHH
Confidence 26789999999999999999864
No 115
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.5e-41 Score=351.08 Aligned_cols=220 Identities=23% Similarity=0.319 Sum_probs=190.7
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCceEEEE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 500 (652)
..++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+|++++.++ +||||+++++++.+++..|+||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 3457999999999999999999875 68999999997543 2345788888888 7999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCC----CcEEEecccCCcccc
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDT----MVAHLSDFGITKLLI 576 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~----~~~kl~Dfg~~~~~~ 576 (652)
||+++|+|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||++.++ +.+||+|||+++...
T Consensus 96 E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 9999999999987654 689999999999999999999999 99999999999998432 359999999998753
Q ss_pred CCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch---------------------------
Q 041689 577 GEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS--------------------------- 629 (652)
Q Consensus 577 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~--------------------------- 629 (652)
... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 172 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 249 (342)
T 2qr7_A 172 AEN--GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNS 249 (342)
T ss_dssp CTT--CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTT
T ss_pred CCC--CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCcccccc
Confidence 322 223445789999999999888899999999999999999999999742
Q ss_pred ---hhhhhhcccchhhhccccCccCC
Q 041689 630 ---FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ---~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||..||++|||++|+
T Consensus 250 ~s~~~~~li~~~L~~dP~~R~t~~~i 275 (342)
T 2qr7_A 250 VSDTAKDLVSKMLHVDPHQRLTAALV 275 (342)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 26789999999999999998764
No 116
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.5e-40 Score=336.88 Aligned_cols=223 Identities=21% Similarity=0.255 Sum_probs=197.1
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
..+|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 457889999999999999999976 58889999997542 23456788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|||+++++|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+......
T Consensus 94 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~- 168 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD- 168 (294)
T ss_dssp EECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCST-
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccC-
Confidence 99999999999887654 689999999999999999999999 9999999999999999999999999999865322
Q ss_pred CccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch-----------------------hhhhhhc
Q 041689 580 QSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS-----------------------FVFNLAM 636 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~-----------------------~l~~l~~ 636 (652)
........||+.|+|||++.+..++.++||||+|+++|||++|+.||.. .+.+++.
T Consensus 169 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 247 (294)
T 2rku_A 169 -GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ 247 (294)
T ss_dssp -TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHH
T ss_pred -ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCccccCHHHHHHHH
Confidence 1223345689999999999988999999999999999999999999643 3788999
Q ss_pred ccchhhhccccCccCC
Q 041689 637 ECTIESLELRINAKEI 652 (652)
Q Consensus 637 ~~l~~~p~~Rpt~~ei 652 (652)
+||+.||++|||++|+
T Consensus 248 ~~l~~~p~~Rps~~~l 263 (294)
T 2rku_A 248 KMLQTDPTARPTINEL 263 (294)
T ss_dssp HHTCSSGGGSCCGGGG
T ss_pred HHcccChhhCcCHHHH
Confidence 9999999999999985
No 117
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=6.2e-41 Score=337.09 Aligned_cols=222 Identities=25% Similarity=0.388 Sum_probs=182.7
Q ss_pred hcCCCccceeccccceEEEEEEeCCCcEEEEEEeeccc----chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQC----GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
..+|++.+.||+|+||.||+|++. ++.||||+++... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357889999999999999999984 8899999986542 22346788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCC--------CCcEEEecccC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDD--------TMVAHLSDFGI 571 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~--------~~~~kl~Dfg~ 571 (652)
|||+++++|.+++... .+++..+..++.|++.||+|||++...+|+||||||+||+++. ++.+||+|||.
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp EECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred EEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 9999999999988644 5899999999999999999999992122999999999999985 77899999999
Q ss_pred CccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch----------------------
Q 041689 572 TKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS---------------------- 629 (652)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~---------------------- 629 (652)
++..... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||..
T Consensus 163 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (271)
T 3dtc_A 163 AREWHRT----TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPST 238 (271)
T ss_dssp -----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTT
T ss_pred ccccccc----cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcc
Confidence 9865321 22245689999999999988999999999999999999999999643
Q ss_pred ---hhhhhhcccchhhhccccCccCC
Q 041689 630 ---FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ---~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 239 ~~~~~~~li~~~l~~~p~~Rps~~e~ 264 (271)
T 3dtc_A 239 CPEPFAKLMEDCWNPDPHSRPSFTNI 264 (271)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cCHHHHHHHHHHhcCCcccCcCHHHH
Confidence 37899999999999999999874
No 118
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.1e-40 Score=345.48 Aligned_cols=222 Identities=25% Similarity=0.350 Sum_probs=189.2
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 501 (652)
++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 57889999999999999999875 58999999986542 2334567899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCc
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 581 (652)
|++++++.++..... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++..... .
T Consensus 105 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 178 (331)
T 4aaa_A 105 FVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP--G 178 (331)
T ss_dssp CCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred cCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCC--c
Confidence 999999888765544 689999999999999999999999 9999999999999999999999999999865322 2
Q ss_pred cccccccCCccccCccccccC-ccCcccchhhHHHHHHHHHhCCCCcc--------------------------------
Q 041689 582 MTQTQTLATIGYIAPEYGREG-RVFANGDVYSFGIMLMEIHSAKQQCV-------------------------------- 628 (652)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~-------------------------------- 628 (652)
.......+|+.|+|||++.+. .++.++||||+||++|||++|+.||.
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 223445689999999998775 78899999999999999999999863
Q ss_pred ----------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ----------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ----------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++|+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el 304 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL 304 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGG
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHH
Confidence 346789999999999999999885
No 119
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=5.7e-41 Score=362.47 Aligned_cols=219 Identities=22% Similarity=0.231 Sum_probs=185.4
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecC------C
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNE------E 494 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~ 494 (652)
.++|++.+.||+|+||.||+|++. +++.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467999999999999999999865 6899999999754 334456788999999999999999999998654 3
Q ss_pred ceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcc
Q 041689 495 FKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL 574 (652)
Q Consensus 495 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~ 574 (652)
..|+||||+++ ++.+.+.. .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 56999999986 56666543 488999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch-------------------------
Q 041689 575 LIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS------------------------- 629 (652)
Q Consensus 575 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~------------------------- 629 (652)
... ........||+.|+|||++.+..|+.++||||+||++|||++|+.||..
T Consensus 214 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 214 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp ------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS
T ss_pred cCC---CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc
Confidence 532 2233456799999999999999999999999999999999999999742
Q ss_pred ----------------------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ----------------------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ----------------------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||..||++|||++|+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~ 353 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 353 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 36789999999999999999874
No 120
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.3e-40 Score=361.20 Aligned_cols=221 Identities=23% Similarity=0.317 Sum_probs=195.2
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
++|...+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++++++||||+++++++.+.+..|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 57888999999999999999975 69999999997542 233467889999999999999999999999999999999
Q ss_pred EccCCCChhhhhhcCC---CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccC
Q 041689 501 EHMPHGSLEKCLYSSN---CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 577 (652)
||++||+|.+++.... ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++.+..
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 9999999999887543 3689999999999999999999999 999999999999999999999999999987532
Q ss_pred CCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch---------------------------h
Q 041689 578 EDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS---------------------------F 630 (652)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~---------------------------~ 630 (652)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.. .
T Consensus 342 ~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~ 419 (543)
T 3c4z_A 342 GQ--TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419 (543)
T ss_dssp TC--CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCCTTSCHH
T ss_pred CC--cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCCcccCHH
Confidence 21 223345799999999999999999999999999999999999999743 2
Q ss_pred hhhhhcccchhhhccccCcc
Q 041689 631 VFNLAMECTIESLELRINAK 650 (652)
Q Consensus 631 l~~l~~~~l~~~p~~Rpt~~ 650 (652)
+.+++.+||+.||++||++.
T Consensus 420 ~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 420 SKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp HHHHHHHHSCSSGGGSCCCB
T ss_pred HHHHHHHhccCCHhHCCCCc
Confidence 67899999999999999864
No 121
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.1e-40 Score=364.52 Aligned_cols=219 Identities=23% Similarity=0.320 Sum_probs=194.1
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
.++|.+.+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++++++||||+++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 456889999999999999999875 69999999997542 23345678999999999999999999999999999999
Q ss_pred EEccCCCChhhhhhcCCC-CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCC
Q 041689 500 LEHMPHGSLEKCLYSSNC-ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE 578 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 578 (652)
|||++||+|.+++..... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 999999999999876542 589999999999999999999999 9999999999999999999999999999875322
Q ss_pred CCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch---------------------------hh
Q 041689 579 DQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS---------------------------FV 631 (652)
Q Consensus 579 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~---------------------------~l 631 (652)
......+||+.|+|||++.+..++.++||||+||++|||++|+.||.. .+
T Consensus 340 ---~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~ 416 (576)
T 2acx_A 340 ---QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQA 416 (576)
T ss_dssp ---CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred ---ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccCCHHH
Confidence 223445799999999999999999999999999999999999999753 26
Q ss_pred hhhhcccchhhhccccC
Q 041689 632 FNLAMECTIESLELRIN 648 (652)
Q Consensus 632 ~~l~~~~l~~~p~~Rpt 648 (652)
.+++.+||+.||++||+
T Consensus 417 ~dLI~~lL~~dP~~R~g 433 (576)
T 2acx_A 417 RSLCSQLLCKDPAERLG 433 (576)
T ss_dssp HHHHHHHTCSSGGGSTT
T ss_pred HHHHHHhccCCHHHcCC
Confidence 78999999999999993
No 122
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.2e-40 Score=335.84 Aligned_cols=225 Identities=22% Similarity=0.276 Sum_probs=196.7
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 501 (652)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 457999999999999999999875 68999999997543 3345778999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCc
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 581 (652)
|+++++|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.........
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 999999999887654 689999999999999999999999 9999999999999999999999999999865333222
Q ss_pred cccccccCCccccCccccccCcc-CcccchhhHHHHHHHHHhCCCCcch--------------------------hhhhh
Q 041689 582 MTQTQTLATIGYIAPEYGREGRV-FANGDVYSFGIMLMEIHSAKQQCVS--------------------------FVFNL 634 (652)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~p~~~--------------------------~l~~l 634 (652)
.......|++.|+|||++.+..+ +.++||||+|+++|||++|+.||.. .+.++
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHH
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHH
Confidence 23345568999999999987765 6789999999999999999999642 26789
Q ss_pred hcccchhhhccccCccCC
Q 041689 635 AMECTIESLELRINAKEI 652 (652)
Q Consensus 635 ~~~~l~~~p~~Rpt~~ei 652 (652)
+.+||+.||++|||++||
T Consensus 242 i~~~l~~~p~~Rps~~~i 259 (276)
T 2yex_A 242 LHKILVENPSARITIPDI 259 (276)
T ss_dssp HHHHSCSSTTTSCCHHHH
T ss_pred HHHHCCCCchhCCCHHHH
Confidence 999999999999999864
No 123
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=9.2e-41 Score=346.56 Aligned_cols=226 Identities=22% Similarity=0.359 Sum_probs=195.3
Q ss_pred hcCCCccceeccccceEEEEEEeC--------CCcEEEEEEeeccc-chhhhhHHHHHHHHHhc-CCCeeeeEEeeeecC
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG--------DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSI-HYRNLVKIISSCSNE 493 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 493 (652)
.++|++.+.||+|+||.||+|++. ++..||+|+++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467899999999999999999853 46789999997553 34456788999999999 899999999999999
Q ss_pred CceEEEEEccCCCChhhhhhcCCC---------------CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee
Q 041689 494 EFKELVLEHMPHGSLEKCLYSSNC---------------ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL 558 (652)
Q Consensus 494 ~~~~lv~e~~~~g~L~~~l~~~~~---------------~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll 558 (652)
+..++||||+++|+|.+++..... .+++.++..++.|++.||+|||++ ||+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 999999999999999999976542 488999999999999999999999 99999999999999
Q ss_pred CCCCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch--------
Q 041689 559 DDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS-------- 629 (652)
Q Consensus 559 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~-------- 629 (652)
+.++.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~ 270 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHH
Confidence 9999999999999987643322222334457889999999988899999999999999999999 9888643
Q ss_pred ----------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ----------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ----------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 271 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 309 (334)
T 2pvf_A 271 LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309 (334)
T ss_dssp HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 37889999999999999999874
No 124
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=6.3e-41 Score=342.64 Aligned_cols=225 Identities=24% Similarity=0.402 Sum_probs=193.0
Q ss_pred cCCCccceeccccceEEEEEEe-----CCCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecC--Cce
Q 041689 425 YGFNENNLIGKGGFGTIYKSRI-----GDGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNE--EFK 496 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~ 496 (652)
.+|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3488889999999999999983 368899999997542 33457789999999999999999999999876 668
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcccc
Q 041689 497 ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576 (652)
Q Consensus 497 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 576 (652)
++||||+++++|.+++......+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccccccc
Confidence 999999999999999976666799999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCc-cccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCc----------------------------
Q 041689 577 GEDQS-MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQC---------------------------- 627 (652)
Q Consensus 577 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~---------------------------- 627 (652)
..... .......+|..|+|||++.+..++.++||||+||++|||++|..|+
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 33221 1223456888899999999999999999999999999999998763
Q ss_pred -----------chhhhhhhcccchhhhccccCccCC
Q 041689 628 -----------VSFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 628 -----------~~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+..+.+++.+||+.||++|||++||
T Consensus 258 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 293 (302)
T 4e5w_A 258 EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNL 293 (302)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred ccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 2347899999999999999999874
No 125
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.7e-40 Score=336.80 Aligned_cols=219 Identities=27% Similarity=0.408 Sum_probs=189.9
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccch-------hhhhHHHHHHHHHhcCCCeeeeEEeeeecCCc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGR-------AFKSFDIECEIMKSIHYRNLVKIISSCSNEEF 495 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 495 (652)
.++|++.+.||+|+||.||+|++. +++.||+|++...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 367889999999999999999874 7899999998654221 1267889999999999999999999987665
Q ss_pred eEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCC--eEecCCCCCCeeeCCCCc-----EEEec
Q 041689 496 KELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP--VIHCDLKPSNVLLDDTMV-----AHLSD 568 (652)
Q Consensus 496 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~dlkp~NIll~~~~~-----~kl~D 568 (652)
++||||+++|+|.+++......+++..+..++.|++.||+|||++ + |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 699999999999999887777899999999999999999999999 8 999999999999987776 99999
Q ss_pred ccCCccccCCCCccccccccCCccccCcccc--ccCccCcccchhhHHHHHHHHHhCCCCcch-----------------
Q 041689 569 FGITKLLIGEDQSMTQTQTLATIGYIAPEYG--REGRVFANGDVYSFGIMLMEIHSAKQQCVS----------------- 629 (652)
Q Consensus 569 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~sDvwslG~vl~elltg~~p~~~----------------- 629 (652)
||+++... .......||+.|+|||++ ....++.++||||+||++|||++|+.||..
T Consensus 173 fg~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 247 (287)
T 4f0f_A 173 FGLSQQSV-----HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL 247 (287)
T ss_dssp CTTCBCCS-----SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC
T ss_pred CCcccccc-----ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC
Confidence 99997532 223446789999999998 455678999999999999999999999643
Q ss_pred ----------hhhhhhcccchhhhccccCccCC
Q 041689 630 ----------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ----------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 248 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 280 (287)
T 4f0f_A 248 RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280 (287)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 27889999999999999999874
No 126
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.6e-41 Score=348.44 Aligned_cols=230 Identities=21% Similarity=0.285 Sum_probs=191.9
Q ss_pred HHHHhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc-----cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecC
Q 041689 420 VCRATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ-----CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNE 493 (652)
Q Consensus 420 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 493 (652)
+....++|.+.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3455677999999999999999999864 6889999999754 234557889999999999999999999999999
Q ss_pred CceEEEEEccCCCChhhhhhcC---------------------------------------CCCCCHHHHHHHHHHHHHH
Q 041689 494 EFKELVLEHMPHGSLEKCLYSS---------------------------------------NCILDIFQRLNIMIDVASV 534 (652)
Q Consensus 494 ~~~~lv~e~~~~g~L~~~l~~~---------------------------------------~~~l~~~~~~~i~~~i~~~ 534 (652)
+..++||||+++|+|.+++... ...+++..+..++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999988521 1123567788899999999
Q ss_pred HHHHHcCCCCCeEecCCCCCCeeeCCCC--cEEEecccCCccccCCCCc--cccccccCCccccCcccccc--CccCccc
Q 041689 535 LEYLHFNFLVPVIHCDLKPSNVLLDDTM--VAHLSDFGITKLLIGEDQS--MTQTQTLATIGYIAPEYGRE--GRVFANG 608 (652)
Q Consensus 535 L~~LH~~~~~~iiH~dlkp~NIll~~~~--~~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~s 608 (652)
|+|||++ +|+||||||+||+++.++ .+||+|||+++.+...... .......||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998766 8999999999865332221 12345569999999999865 6788999
Q ss_pred chhhHHHHHHHHHhCCCCcc---------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 609 DVYSFGIMLMEIHSAKQQCV---------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 609 DvwslG~vl~elltg~~p~~---------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
|||||||++|||++|+.||. ..+.+++.+||+.||++|||++|+
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 99999999999999999963 347899999999999999999764
No 127
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=5.4e-41 Score=347.27 Aligned_cols=225 Identities=26% Similarity=0.349 Sum_probs=196.7
Q ss_pred cCCCccceeccccceEEEEEEe-----CCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeee--cCCceE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS--NEEFKE 497 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~ 497 (652)
++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. .....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5788999999999999999983 368899999998766666678999999999999999999999886 456789
Q ss_pred EEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccC
Q 041689 498 LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 577 (652)
+||||+++++|.+++......+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 99999999999999987555799999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCcc-ccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCc-----------------------------
Q 041689 578 EDQSM-TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQC----------------------------- 627 (652)
Q Consensus 578 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~----------------------------- 627 (652)
..... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE 259 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence 22211 223345888899999999999999999999999999999998874
Q ss_pred ----------chhhhhhhcccchhhhccccCccCC
Q 041689 628 ----------VSFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 628 ----------~~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+..+.+++.+||+.||++|||++||
T Consensus 260 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 294 (327)
T 3lxl_A 260 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 294 (327)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHH
Confidence 2347899999999999999999874
No 128
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.1e-41 Score=346.35 Aligned_cols=236 Identities=22% Similarity=0.335 Sum_probs=201.5
Q ss_pred cccHHHHHHHhcCCCccceeccccceEEEEEEe------CCCcEEEEEEeeccc-chhhhhHHHHHHHHHhc-CCCeeee
Q 041689 414 RFSYLEVCRATYGFNENNLIGKGGFGTIYKSRI------GDGMEVAVKVFHLQC-GRAFKSFDIECEIMKSI-HYRNLVK 485 (652)
Q Consensus 414 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~ 485 (652)
.+...+.....++|++.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|+++++++ +||||++
T Consensus 16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence 455556666678999999999999999999973 357889999997653 23456788999999999 7999999
Q ss_pred EEeeeecCC-ceEEEEEccCCCChhhhhhcCCCC---------------CCHHHHHHHHHHHHHHHHHHHcCCCCCeEec
Q 041689 486 IISSCSNEE-FKELVLEHMPHGSLEKCLYSSNCI---------------LDIFQRLNIMIDVASVLEYLHFNFLVPVIHC 549 (652)
Q Consensus 486 ~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~---------------l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~ 549 (652)
+++++...+ ..++||||+++++|.+++...... +++..+..++.|++.||.|||++ ||+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccccc
Confidence 999987654 589999999999999999865432 78999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc
Q 041689 550 DLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV 628 (652)
Q Consensus 550 dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~ 628 (652)
||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999986643333333344567889999999999999999999999999999998 998863
Q ss_pred h-------------------------hhhhhhcccchhhhccccCccCC
Q 041689 629 S-------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ~-------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
. .+.+++.+||+.||++|||++||
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 301 (316)
T 2xir_A 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 301 (316)
T ss_dssp TCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 2 37889999999999999999874
No 129
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.6e-40 Score=352.55 Aligned_cols=217 Identities=20% Similarity=0.242 Sum_probs=180.7
Q ss_pred cCCCcc-ceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHh-cCCCeeeeEEeeeec----CCceE
Q 041689 425 YGFNEN-NLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKS-IHYRNLVKIISSCSN----EEFKE 497 (652)
Q Consensus 425 ~~y~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~----~~~~~ 497 (652)
++|.+. +.||+|+||.||+|+.. +++.||||+++.. ..+.+|++++.+ .+||||+++++++.. .+..|
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456665 68999999999999865 6899999998632 456788888754 489999999998865 56789
Q ss_pred EEEEccCCCChhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCC---CCcEEEecccCCc
Q 041689 498 LVLEHMPHGSLEKCLYSSN-CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDD---TMVAHLSDFGITK 573 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~---~~~~kl~Dfg~~~ 573 (652)
+||||+++|+|.+++.... ..+++.++..|+.|++.||+|||++ +|+||||||+||+++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999998754 3689999999999999999999999 9999999999999997 7899999999998
Q ss_pred cccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc-------------------------
Q 041689 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV------------------------- 628 (652)
Q Consensus 574 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~------------------------- 628 (652)
.... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 213 ~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~ 289 (400)
T 1nxk_A 213 ETTS---HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 289 (400)
T ss_dssp ECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTT
T ss_pred ccCC---CCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCc
Confidence 6522 122345678999999999999999999999999999999999999863
Q ss_pred ------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||..||++|||++||
T Consensus 290 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ei 319 (400)
T 1nxk_A 290 EWSEVSEEVKMLIRNLLKTEPTQRMTITEF 319 (400)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred ccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 236789999999999999999864
No 130
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.1e-41 Score=364.01 Aligned_cols=223 Identities=22% Similarity=0.253 Sum_probs=186.4
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc---cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ---CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
.++|++.+.||+|+||.||+|+.. +|+.||||+++.. .......+.+|++++++++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999865 6899999999754 223345677899999999999999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF-NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE 578 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 578 (652)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+ . ||+||||||+||+++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~- 301 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK- 301 (446)
T ss_dssp ECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccC-
Confidence 99999999999887654 68999999999999999999998 8 999999999999999999999999999985422
Q ss_pred CCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch-----------------------hhhhhh
Q 041689 579 DQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS-----------------------FVFNLA 635 (652)
Q Consensus 579 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~-----------------------~l~~l~ 635 (652)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||.. .+.+++
T Consensus 302 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li 380 (446)
T 4ejn_A 302 -DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLL 380 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred -CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHH
Confidence 22233456799999999999999999999999999999999999999633 378899
Q ss_pred cccchhhhcccc-----CccCC
Q 041689 636 MECTIESLELRI-----NAKEI 652 (652)
Q Consensus 636 ~~~l~~~p~~Rp-----t~~ei 652 (652)
.+||+.||++|| +++|+
T Consensus 381 ~~~L~~dP~~R~~~~~~t~~el 402 (446)
T 4ejn_A 381 SGLLKKDPKQRLGGGSEDAKEI 402 (446)
T ss_dssp HHHTCSSTTTSTTCSTTTHHHH
T ss_pred HHHcccCHHHhCCCCCCCHHHH
Confidence 999999999999 77653
No 131
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1e-40 Score=361.48 Aligned_cols=195 Identities=21% Similarity=0.279 Sum_probs=154.8
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHHhcCCCeeeeEEeeeec-----CCc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISSCSN-----EEF 495 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~ 495 (652)
.++|++.+.||+|+||.||+|++. +++.||||++... .....+.+.+|++++++++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 367999999999999999999865 6899999999653 23345678899999999999999999999843 357
Q ss_pred eEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccc
Q 041689 496 KELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL 575 (652)
Q Consensus 496 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 575 (652)
.|+||||+. ++|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++..
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEeccc-cchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 899999985 69999887654 699999999999999999999999 9999999999999999999999999999875
Q ss_pred cCCCCc-------------------------cccccccCCccccCcccc-ccCccCcccchhhHHHHHHHHHhC
Q 041689 576 IGEDQS-------------------------MTQTQTLATIGYIAPEYG-REGRVFANGDVYSFGIMLMEIHSA 623 (652)
Q Consensus 576 ~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG~vl~elltg 623 (652)
...... ......+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 322111 122345689999999976 566799999999999999999983
No 132
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=8.8e-41 Score=338.60 Aligned_cols=221 Identities=23% Similarity=0.323 Sum_probs=188.9
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEc
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 502 (652)
++|.+.+.||+|+||.||+|+.. ++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 45889999999999999999865 68999999997653 33457889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcC---CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee---CCCCcEEEecccCCcccc
Q 041689 503 MPHGSLEKCLYSS---NCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFGITKLLI 576 (652)
Q Consensus 503 ~~~g~L~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~ 576 (652)
+++|+|.+++... ...+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||+++...
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999988542 24689999999999999999999999 99999999999999 456889999999998653
Q ss_pred CCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc--------------------------hh
Q 041689 577 GEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV--------------------------SF 630 (652)
Q Consensus 577 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~--------------------------~~ 630 (652)
.. .......||+.|+|||++. +.++.++||||+||++|||++|+.||. +.
T Consensus 179 ~~---~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (285)
T 3is5_A 179 SD---EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQ 254 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHH
T ss_pred Cc---ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHH
Confidence 22 2234456899999999875 578999999999999999999999963 34
Q ss_pred hhhhhcccchhhhccccCccCC
Q 041689 631 VFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 631 l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+.+++.+||+.||++|||++||
T Consensus 255 ~~~li~~~L~~dP~~Rps~~e~ 276 (285)
T 3is5_A 255 AVDLLKQMLTKDPERRPSAAQV 276 (285)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHH
Confidence 7789999999999999999874
No 133
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5.8e-41 Score=339.22 Aligned_cols=224 Identities=21% Similarity=0.310 Sum_probs=183.0
Q ss_pred hcCCCccceeccccceEEEEEEeCC----CcEEEEEEeecc-cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGD----GMEVAVKVFHLQ-CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKEL 498 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 498 (652)
.++|++.+.||+|+||.||+|++.. +..||+|+++.. .....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4678899999999999999998642 456999998654 2334567899999999999999999999985 457889
Q ss_pred EEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCC
Q 041689 499 VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE 578 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 578 (652)
||||+++++|.+++......+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 9999999999999987766799999999999999999999999 9999999999999999999999999999865322
Q ss_pred CCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------hhhhh
Q 041689 579 DQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------SFVFN 633 (652)
Q Consensus 579 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~~l~~ 633 (652)
. ........+++.|+|||++.+..++.++|||||||++|||++ |+.||. ..+.+
T Consensus 170 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 248 (281)
T 1mp8_A 170 T-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYS 248 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred c-ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 1 112233456788999999998899999999999999999997 888864 23778
Q ss_pred hhcccchhhhccccCccCC
Q 041689 634 LAMECTIESLELRINAKEI 652 (652)
Q Consensus 634 l~~~~l~~~p~~Rpt~~ei 652 (652)
++.+||+.||++|||++||
T Consensus 249 li~~~l~~~p~~Rps~~~l 267 (281)
T 1mp8_A 249 LMTKCWAYDPSRRPRFTEL 267 (281)
T ss_dssp HHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHccCChhhCcCHHHH
Confidence 9999999999999999864
No 134
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.3e-40 Score=342.42 Aligned_cols=223 Identities=21% Similarity=0.255 Sum_probs=197.4
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
..+|.+.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467889999999999999999876 58899999997542 23456788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|||+++++|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~- 194 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD- 194 (335)
T ss_dssp ECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCST-
T ss_pred EecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccC-
Confidence 99999999999887654 689999999999999999999999 9999999999999999999999999999865322
Q ss_pred CccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch-----------------------hhhhhhc
Q 041689 580 QSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS-----------------------FVFNLAM 636 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~-----------------------~l~~l~~ 636 (652)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.. .+.+++.
T Consensus 195 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 273 (335)
T 2owb_A 195 -GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ 273 (335)
T ss_dssp -TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHH
T ss_pred -cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHH
Confidence 1223345689999999999988999999999999999999999999643 3688999
Q ss_pred ccchhhhccccCccCC
Q 041689 637 ECTIESLELRINAKEI 652 (652)
Q Consensus 637 ~~l~~~p~~Rpt~~ei 652 (652)
+||..||++|||++||
T Consensus 274 ~~l~~dp~~Rps~~el 289 (335)
T 2owb_A 274 KMLQTDPTARPTINEL 289 (335)
T ss_dssp HHTCSSGGGSCCGGGG
T ss_pred HHccCChhHCcCHHHH
Confidence 9999999999999885
No 135
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.6e-40 Score=348.74 Aligned_cols=232 Identities=20% Similarity=0.230 Sum_probs=193.4
Q ss_pred cccHHHHHHHhcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccc-----------hhhhhHHHHHHHHHhcCCCe
Q 041689 414 RFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCG-----------RAFKSFDIECEIMKSIHYRN 482 (652)
Q Consensus 414 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~n 482 (652)
+....++....++|.+.+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++++++|||
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 90 (362)
T 3pg1_A 11 RDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN 90 (362)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence 4456788888999999999999999999999988899999999864321 12367899999999999999
Q ss_pred eeeEEeeeec-----CCceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCee
Q 041689 483 LVKIISSCSN-----EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVL 557 (652)
Q Consensus 483 iv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIl 557 (652)
|+++++++.. ....++||||++ |++.+++......+++..+..++.|++.||+|||++ ||+||||||+||+
T Consensus 91 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 91 ILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL 166 (362)
T ss_dssp BCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred ccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence 9999999843 346799999998 589888887766799999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEecccCCccccCCCCccccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCCcch-------
Q 041689 558 LDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQCVS------- 629 (652)
Q Consensus 558 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~------- 629 (652)
++.++.+||+|||+++.... ........+|+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 243 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTA---DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243 (362)
T ss_dssp ECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred EcCCCCEEEEecCccccccc---ccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 99999999999999975422 222344568999999998876 6789999999999999999999999743
Q ss_pred ------------------------------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ------------------------------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ------------------------------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 314 (362)
T 3pg1_A 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA 314 (362)
T ss_dssp HHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence 36789999999999999999864
No 136
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.7e-40 Score=334.62 Aligned_cols=221 Identities=21% Similarity=0.291 Sum_probs=192.5
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccc------hhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCG------RAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKE 497 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 497 (652)
++|++.+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46899999999999999999876 689999999975421 13567899999999999999999999999999999
Q ss_pred EEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCC----cEEEecccCCc
Q 041689 498 LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM----VAHLSDFGITK 573 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~----~~kl~Dfg~~~ 573 (652)
+||||+++++|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++ .+||+|||.+.
T Consensus 85 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999999987644 689999999999999999999999 999999999999998877 89999999998
Q ss_pred cccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch------------------------
Q 041689 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS------------------------ 629 (652)
Q Consensus 574 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~------------------------ 629 (652)
..... .......+++.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 161 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T 3bhy_A 161 KIEAG---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSN 237 (283)
T ss_dssp ECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTT
T ss_pred eccCC---CcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhccc
Confidence 65321 122345689999999999989999999999999999999999999632
Q ss_pred ---hhhhhhcccchhhhccccCccCC
Q 041689 630 ---FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ---~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||..||++|||++|+
T Consensus 238 ~~~~~~~li~~~l~~dp~~Rps~~~~ 263 (283)
T 3bhy_A 238 TSELAKDFIRRLLVKDPKRRMTIAQS 263 (283)
T ss_dssp CCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred CCHHHHHHHHHHccCCHhHCcCHHHH
Confidence 26889999999999999999764
No 137
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.7e-41 Score=363.15 Aligned_cols=225 Identities=24% Similarity=0.393 Sum_probs=195.1
Q ss_pred HHhcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEE
Q 041689 422 RATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 422 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 501 (652)
...++|.+.+.||+|+||.||+|.+.++..||||+++... ...+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 3456788999999999999999999888999999997653 34678999999999999999999999986 567899999
Q ss_pred ccCCCChhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 502 HMPHGSLEKCLYSSN-CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
|+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..... .
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~-~ 338 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN-E 338 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH-H
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC-c
Confidence 999999999997543 2588899999999999999999999 9999999999999999999999999999865221 1
Q ss_pred ccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------hhhhhhh
Q 041689 581 SMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------SFVFNLA 635 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~~l~~l~ 635 (652)
........+++.|+|||++..+.++.++|||||||++|||++ |+.||. ..+.+++
T Consensus 339 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li 418 (454)
T 1qcf_A 339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIM 418 (454)
T ss_dssp HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHHH
T ss_pred eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 111223346788999999998999999999999999999999 998864 3478899
Q ss_pred cccchhhhccccCccCC
Q 041689 636 MECTIESLELRINAKEI 652 (652)
Q Consensus 636 ~~~l~~~p~~Rpt~~ei 652 (652)
.+||+.||++|||+++|
T Consensus 419 ~~cl~~dp~~RPt~~~i 435 (454)
T 1qcf_A 419 MRCWKNRPEERPTFEYI 435 (454)
T ss_dssp HHHTCSSGGGSCCHHHH
T ss_pred HHHccCChhHCcCHHHH
Confidence 99999999999999764
No 138
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.3e-40 Score=340.72 Aligned_cols=221 Identities=20% Similarity=0.276 Sum_probs=192.8
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 502 (652)
.++|.+.+.||+|+||.||+|+.. +|+.||+|+++.........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 356899999999999999999875 6899999999865444556788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee---CCCCcEEEecccCCccccCCC
Q 041689 503 MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
+++++|.+++.... .+++.++..++.|++.||+|||+. ||+||||||+||++ ++++.+||+|||+++...
T Consensus 88 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~--- 160 (304)
T 2jam_A 88 VSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ--- 160 (304)
T ss_dssp CCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC---
T ss_pred CCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecC---
Confidence 99999999887654 689999999999999999999999 99999999999999 788999999999987542
Q ss_pred CccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc---------------------------hhhh
Q 041689 580 QSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV---------------------------SFVF 632 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~---------------------------~~l~ 632 (652)
........||+.|+|||++.+..++.++||||+||++|||++|+.||. ..+.
T Consensus 161 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (304)
T 2jam_A 161 -NGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAK 239 (304)
T ss_dssp -CBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHH
T ss_pred -CCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHH
Confidence 122234468999999999999999999999999999999999999863 3478
Q ss_pred hhhcccchhhhccccCccCC
Q 041689 633 NLAMECTIESLELRINAKEI 652 (652)
Q Consensus 633 ~l~~~~l~~~p~~Rpt~~ei 652 (652)
+++.+||..||++|||++|+
T Consensus 240 ~li~~~l~~dp~~Rps~~~~ 259 (304)
T 2jam_A 240 DFICHLLEKDPNERYTCEKA 259 (304)
T ss_dssp HHHHHHHCSSTTTSCCHHHH
T ss_pred HHHHHHcCCChhHCcCHHHH
Confidence 89999999999999999764
No 139
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=7e-41 Score=346.12 Aligned_cols=225 Identities=24% Similarity=0.368 Sum_probs=186.5
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcE----EEEEEeecc-cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGME----VAVKVFHLQ-CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKE 497 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 497 (652)
..+|++.+.||+|+||.||+|++. +++. ||+|.+... .....+.+.+|+.++++++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 467999999999999999999864 4554 567766533 3345678899999999999999999999998765 78
Q ss_pred EEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccC
Q 041689 498 LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 577 (652)
+|+||+++|+|.+++......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 99999999999999988776899999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch------------------------hhh
Q 041689 578 EDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS------------------------FVF 632 (652)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~------------------------~l~ 632 (652)
...........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.. .+.
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 249 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVY 249 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHH
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHH
Confidence 333333344557889999999999999999999999999999999 9998653 378
Q ss_pred hhhcccchhhhccccCccCC
Q 041689 633 NLAMECTIESLELRINAKEI 652 (652)
Q Consensus 633 ~l~~~~l~~~p~~Rpt~~ei 652 (652)
+++.+||..||++|||++||
T Consensus 250 ~li~~~l~~dp~~Rps~~el 269 (327)
T 3lzb_A 250 MIMRKCWMIDADSRPKFREL 269 (327)
T ss_dssp HHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHcCCChhHCcCHHHH
Confidence 89999999999999999874
No 140
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1e-40 Score=338.93 Aligned_cols=224 Identities=25% Similarity=0.365 Sum_probs=181.4
Q ss_pred HhcCCCccceeccccceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
..++|++.+.||+|+||.||+|+.. ..||+|+++... ....+.+.+|++++++++||||+++++++ ..+..++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 3567999999999999999999864 369999997542 34456789999999999999999999965 455689999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
||+++++|.+++......+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 99 QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred EecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccc
Confidence 99999999999977766899999999999999999999999 999999999999999999999999999986533233
Q ss_pred ccccccccCCccccCccccc---cCccCcccchhhHHHHHHHHHhCCCCcch----------------------------
Q 041689 581 SMTQTQTLATIGYIAPEYGR---EGRVFANGDVYSFGIMLMEIHSAKQQCVS---------------------------- 629 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~---------------------------- 629 (652)
........||+.|+|||++. +..++.++||||+||++|||++|+.||..
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCP 255 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSC
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCC
Confidence 33334456899999999986 56788899999999999999999999643
Q ss_pred -hhhhhhcccchhhhccccCccCC
Q 041689 630 -FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 256 ~~l~~li~~~l~~~p~~Rps~~el 279 (289)
T 3og7_A 256 KRMKRLMAECLKKKRDERPSFPRI 279 (289)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHH
Confidence 36789999999999999999864
No 141
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.4e-40 Score=345.95 Aligned_cols=225 Identities=22% Similarity=0.309 Sum_probs=191.7
Q ss_pred hcCCCccceeccccceEEEEEEe-CCCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeec--------
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSN-------- 492 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------- 492 (652)
..+|++.+.||+|+||.||+|+. .+|+.||+|++.... ......+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36799999999999999999987 478999999986542 2234567899999999999999999999876
Q ss_pred CCceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCC
Q 041689 493 EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGIT 572 (652)
Q Consensus 493 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~ 572 (652)
.+..++||||+++ ++.+.+......+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 4468999999986 88887777666799999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCC--ccccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCCcc---------------------
Q 041689 573 KLLIGEDQ--SMTQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQCV--------------------- 628 (652)
Q Consensus 573 ~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~--------------------- 628 (652)
+.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 86542221 122244568999999998876 458999999999999999999999863
Q ss_pred ----------------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ----------------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ----------------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++|+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 309 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 309 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHH
Confidence 236689999999999999999864
No 142
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.7e-39 Score=363.31 Aligned_cols=344 Identities=19% Similarity=0.168 Sum_probs=240.2
Q ss_pred ceeeeceeEeccCCCcCCccCCCCC-CCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCc-------
Q 041689 2 FSISIGKLELNVDDIESPCEIPSEI-NPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIA------- 73 (652)
Q Consensus 2 ~~~~l~~l~l~~~~~~~~~~ip~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~------- 73 (652)
+|.+++.|+|+.|.++. ..|..+ ++++|++|+|++|+|+++.|..|.++++|++|+|++|+|++..+...
T Consensus 30 ~~~~l~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 107 (606)
T 3vq2_A 30 IPSSTKNIDLSFNPLKI--LKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLE 107 (606)
T ss_dssp SCTTCCEEECTTSCCCE--ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCC
T ss_pred CCCCcCEEECCCCCcCE--eChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCC
Confidence 56788999999998873 234355 88999999999999998889999999999999999999988755432
Q ss_pred cccccCCCCCcccccccCCCCCCcEEEcccCCCcccC-CccchhcccccCcEEEccCCcccccCCccccCCC--------
Q 041689 74 DNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNGIL-PRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLT-------- 144 (652)
Q Consensus 74 ~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~-~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-------- 144 (652)
...+..+.........+.++++|++|+|++|.++++. |. .++++++ |++|++++|++++..+..|..++
T Consensus 108 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~-~~~~l~~-L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~ 185 (606)
T 3vq2_A 108 NLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPA-YFSNLTN-LVHVDLSYNYIQTITVNDLQFLRENPQVNLS 185 (606)
T ss_dssp EEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCG-GGGTCTT-CCEEECCSSCCCEECTTTTHHHHHCTTCCCE
T ss_pred EEEccCCccccccccccCCCCCCCEEeCCCCcccceechH-hHhhcCC-CCEEEccCCcceecChhhhhhhhccccccce
Confidence 1223332222222245788888888888888888643 54 6777876 88888888888766554332221
Q ss_pred --------------------------------------------------------------------------------
Q 041689 145 -------------------------------------------------------------------------------- 144 (652)
Q Consensus 145 -------------------------------------------------------------------------------- 144 (652)
T Consensus 186 L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~ 265 (606)
T 3vq2_A 186 LDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDE 265 (606)
T ss_dssp EECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEE
T ss_pred eeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhh
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 041689 145 -------------------------------------------------------------------------------- 144 (652)
Q Consensus 145 -------------------------------------------------------------------------------- 144 (652)
T Consensus 266 l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~ 345 (606)
T 3vq2_A 266 FRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFK 345 (606)
T ss_dssp EEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECC
T ss_pred eeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchh
Confidence
Q ss_pred -----CCCEEEecCcccccc--CCccccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCccccccc-ccCCCCC
Q 041689 145 -----NLTAIYLGGNKLNGS--IPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSIL-TCFSNLA 216 (652)
Q Consensus 145 -----~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~ 216 (652)
+|++|+|++|++++. .|..+..+++|++|++++|.++ .+|..+..+++|+.|++++|++.+..+ ..|..++
T Consensus 346 ~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 424 (606)
T 3vq2_A 346 KVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLE 424 (606)
T ss_dssp CCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCT
T ss_pred hccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccc
Confidence 222222222222222 1333334444444444444444 234455566666666666666666555 5667777
Q ss_pred CCCEEEccCCC--CCCCcccCCCCccceEecccccCCc-cCcccccCCCCCcEEEccCCcCCCcccccccccccCcceec
Q 041689 217 SLRTLSLSYND--GPLPLEIGNLKVLIGIDFSMNNFSS-VIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNF 293 (652)
Q Consensus 217 ~L~~L~Ls~N~--~~~~~~~~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 293 (652)
+|++|++++|. ...|..++++++|+.|++++|++++ .+|..|..+++|++|+|++|++++..|..|..+++|+.|+|
T Consensus 425 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 504 (606)
T 3vq2_A 425 KLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNM 504 (606)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEEC
Confidence 77777777775 3456667788888888888888876 46777888888888888888888777888888888888888
Q ss_pred cccccCCCCchhhcCCCCCceEEeecCcCcccCCCCCCCC-CcccccccCCccCCCCC
Q 041689 294 SNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKGGSFG-NFSAESFEGNKLLCGSP 350 (652)
Q Consensus 294 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-~l~~~~~~~N~~~c~~~ 350 (652)
++|++++..|..|..+++|+.|++++|+++..++....++ .++.+++.+||+.|..+
T Consensus 505 s~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 505 SHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 8888888778888888888888888888886555555554 48888888888888655
No 143
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2e-40 Score=357.64 Aligned_cols=219 Identities=31% Similarity=0.401 Sum_probs=191.1
Q ss_pred HhcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCC-ceEEEEE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEE-FKELVLE 501 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e 501 (652)
...+|.+.+.||+|+||.||+|.+. |+.||||+++... ..+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 3467888999999999999999884 7899999997653 4578899999999999999999999987654 7899999
Q ss_pred ccCCCChhhhhhcCCC-CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 502 HMPHGSLEKCLYSSNC-ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
|+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++....
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~--- 341 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS--- 341 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccc---
Confidence 9999999999986543 478999999999999999999999 999999999999999999999999999985421
Q ss_pred ccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------hhhhhhh
Q 041689 581 SMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------SFVFNLA 635 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~~l~~l~ 635 (652)
......+++.|+|||++.+..++.++|||||||++|||++ |+.||. ..+.+++
T Consensus 342 --~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li 419 (450)
T 1k9a_A 342 --TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVM 419 (450)
T ss_dssp -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred --cccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHH
Confidence 1122357889999999999999999999999999999998 998854 3478999
Q ss_pred cccchhhhccccCccCC
Q 041689 636 MECTIESLELRINAKEI 652 (652)
Q Consensus 636 ~~~l~~~p~~Rpt~~ei 652 (652)
.+||+.||++|||+.||
T Consensus 420 ~~cl~~dp~~Rpt~~~l 436 (450)
T 1k9a_A 420 KNCWHLDAATRPTFLQL 436 (450)
T ss_dssp HHHTCSSGGGSCCHHHH
T ss_pred HHHcCCChhHCcCHHHH
Confidence 99999999999999864
No 144
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=6.3e-41 Score=346.95 Aligned_cols=225 Identities=20% Similarity=0.257 Sum_probs=184.5
Q ss_pred HHHhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccc--hhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceE
Q 041689 421 CRATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCG--RAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKE 497 (652)
Q Consensus 421 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 497 (652)
....++|++.+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|++++++++||||+++++++.+++..+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 445578999999999999999999865 689999999975432 23456778999999999999999999999999999
Q ss_pred EEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee-----CCCCcEEEecccCC
Q 041689 498 LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL-----DDTMVAHLSDFGIT 572 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll-----~~~~~~kl~Dfg~~ 572 (652)
+||||+++ +|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++ ++.+.+||+|||++
T Consensus 110 lv~e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEEECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEEecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 99999985 9999988765 689999999999999999999999 99999999999999 45566999999999
Q ss_pred ccccCCCCccccccccCCccccCccccccC-ccCcccchhhHHHHHHHHHhCCCCcc-----------------------
Q 041689 573 KLLIGEDQSMTQTQTLATIGYIAPEYGREG-RVFANGDVYSFGIMLMEIHSAKQQCV----------------------- 628 (652)
Q Consensus 573 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~----------------------- 628 (652)
+..... ........+|+.|+|||++.+. .++.++||||+||++|||++|+.||.
T Consensus 185 ~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 185 RAFGIP--IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp HHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred cccCCc--ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhh
Confidence 865321 2223445689999999998774 48999999999999999999999963
Q ss_pred ------------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ------------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ------------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++|+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 316 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNA 316 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHH
Confidence 335689999999999999999874
No 145
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=5.2e-40 Score=336.08 Aligned_cols=222 Identities=24% Similarity=0.340 Sum_probs=196.9
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 501 (652)
.+.|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 356889999999999999999864 68999999997553 3446788999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCc
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 581 (652)
|+++++|.+++... .+++..+..++.|++.||.|||+. ||+||||||+||+++.++.+||+|||.+...... .
T Consensus 101 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 173 (303)
T 3a7i_A 101 YLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT--Q 173 (303)
T ss_dssp CCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTT--B
T ss_pred eCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcc--c
Confidence 99999999998754 589999999999999999999999 9999999999999999999999999999865322 1
Q ss_pred cccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch------------------------hhhhhhcc
Q 041689 582 MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS------------------------FVFNLAME 637 (652)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~------------------------~l~~l~~~ 637 (652)
.......|++.|+|||++.+..++.++||||||+++|||++|+.||.. .+.+++.+
T Consensus 174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 253 (303)
T 3a7i_A 174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEA 253 (303)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHHHHHHH
T ss_pred cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccCHHHHHHHHH
Confidence 223445689999999999999999999999999999999999998643 37889999
Q ss_pred cchhhhccccCccCC
Q 041689 638 CTIESLELRINAKEI 652 (652)
Q Consensus 638 ~l~~~p~~Rpt~~ei 652 (652)
||..||++|||++||
T Consensus 254 ~l~~dp~~Rps~~~l 268 (303)
T 3a7i_A 254 CLNKEPSFRPTAKEL 268 (303)
T ss_dssp HCCSSGGGSCCHHHH
T ss_pred HcCCChhhCcCHHHH
Confidence 999999999999874
No 146
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.7e-41 Score=350.95 Aligned_cols=226 Identities=17% Similarity=0.226 Sum_probs=188.0
Q ss_pred HhcCCCccceeccccceEEEEEEeCC------CcEEEEEEeecccchh-----------hhhHHHHHHHHHhcCCCeeee
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIGD------GMEVAVKVFHLQCGRA-----------FKSFDIECEIMKSIHYRNLVK 485 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 485 (652)
...+|.+.+.||+|+||.||+|.+.. ++.||||++....... ......|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 35689999999999999999998754 4789999987543211 112334556677788999999
Q ss_pred EEeeeecC----CceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeC--
Q 041689 486 IISSCSNE----EFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLD-- 559 (652)
Q Consensus 486 ~~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~-- 559 (652)
+++++... ...++||||+ +++|.+++......+++.++..++.|++.||+|||++ +|+||||||+||+++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESS
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecC
Confidence 99998764 4589999999 9999999988766899999999999999999999999 999999999999998
Q ss_pred CCCcEEEecccCCccccCCCCc-----cccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch-----
Q 041689 560 DTMVAHLSDFGITKLLIGEDQS-----MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS----- 629 (652)
Q Consensus 560 ~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~----- 629 (652)
.++.+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 8899999999999865322111 111334599999999999999999999999999999999999999764
Q ss_pred -----------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 -----------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -----------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++||++++|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l 320 (364)
T 3op5_A 269 KYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENL 320 (364)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHH
Confidence 26789999999999999998764
No 147
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.9e-41 Score=348.51 Aligned_cols=231 Identities=24% Similarity=0.381 Sum_probs=197.5
Q ss_pred HHHHHhcCCCccceeccccceEEEEEEeC------CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeee
Q 041689 419 EVCRATYGFNENNLIGKGGFGTIYKSRIG------DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCS 491 (652)
Q Consensus 419 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 491 (652)
++....++|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|++++++++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 34455678999999999999999999753 37789999997543 234557889999999999999999999999
Q ss_pred cCCceEEEEEccCCCChhhhhhcCC---------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCC
Q 041689 492 NEEFKELVLEHMPHGSLEKCLYSSN---------CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM 562 (652)
Q Consensus 492 ~~~~~~lv~e~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~ 562 (652)
+.+..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTC
T ss_pred cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCC
Confidence 9999999999999999999987532 2568899999999999999999999 999999999999999999
Q ss_pred cEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch------------
Q 041689 563 VAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS------------ 629 (652)
Q Consensus 563 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~------------ 629 (652)
.+||+|||+++...............+|+.|+|||++.+..++.++||||+||++|||++ |+.||..
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~ 255 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 255 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHT
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHc
Confidence 999999999986533222222334457889999999998899999999999999999999 7888532
Q ss_pred ------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 256 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~ 290 (322)
T 1p4o_A 256 GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEI 290 (322)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 37889999999999999999864
No 148
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=3.2e-40 Score=334.33 Aligned_cols=220 Identities=23% Similarity=0.293 Sum_probs=195.1
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
++|.+.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 57899999999999999999875 57889999996542 223467889999999999999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
||+++++|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~--- 166 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS--- 166 (284)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS---
T ss_pred EeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc---
Confidence 9999999999987654 689999999999999999999999 999999999999999999999999999876422
Q ss_pred ccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc-----------------------hhhhhhhcc
Q 041689 581 SMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV-----------------------SFVFNLAME 637 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~-----------------------~~l~~l~~~ 637 (652)
.......|++.|+|||++.+..++.++||||||+++|||++|+.||. ..+.+++.+
T Consensus 167 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 245 (284)
T 2vgo_A 167 -LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISK 245 (284)
T ss_dssp -SCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHH
T ss_pred -cccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCCcCCHHHHHHHHH
Confidence 12234568999999999999999999999999999999999999964 236889999
Q ss_pred cchhhhccccCccCC
Q 041689 638 CTIESLELRINAKEI 652 (652)
Q Consensus 638 ~l~~~p~~Rpt~~ei 652 (652)
||+.||++|||++||
T Consensus 246 ~l~~~p~~Rps~~~l 260 (284)
T 2vgo_A 246 LLRYHPPQRLPLKGV 260 (284)
T ss_dssp HSCSSGGGSCCHHHH
T ss_pred HhhcCHhhCCCHHHH
Confidence 999999999999864
No 149
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-40 Score=346.89 Aligned_cols=226 Identities=24% Similarity=0.303 Sum_probs=188.3
Q ss_pred HHHhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccc-----hhhhhHHHHHHHHHhcCCCeeeeEEeeeecCC
Q 041689 421 CRATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCG-----RAFKSFDIECEIMKSIHYRNLVKIISSCSNEE 494 (652)
Q Consensus 421 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 494 (652)
.....+|.+.+.||+|+||.||+|+.. +|+.||||+++.... .....+.+|++++++++||||+++++++...+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 344578999999999999999999975 589999999964321 12346789999999999999999999999999
Q ss_pred ceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcc
Q 041689 495 FKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL 574 (652)
Q Consensus 495 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~ 574 (652)
..++||||+++ ++.+++......+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred ceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 99999999986 89998887766788999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCccccccccCCccccCccccccC-ccCcccchhhHHHHHHHHHhCCCCcc-------------------------
Q 041689 575 LIGEDQSMTQTQTLATIGYIAPEYGREG-RVFANGDVYSFGIMLMEIHSAKQQCV------------------------- 628 (652)
Q Consensus 575 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~------------------------- 628 (652)
.... ........+|+.|+|||++.+. .++.++|||||||++|||++|.+||.
T Consensus 162 ~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 162 FGSP--NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp TTSC--CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSS
T ss_pred ccCC--cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhh
Confidence 5322 2223445689999999998654 58899999999999999999998853
Q ss_pred --------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 --------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 --------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||..||++|||++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 289 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA 289 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHH
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHH
Confidence 346789999999999999999874
No 150
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=6.8e-41 Score=351.35 Aligned_cols=221 Identities=23% Similarity=0.343 Sum_probs=194.3
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEc
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 502 (652)
++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++..++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 57899999999999999999876 68999999997652 34456789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCcc
Q 041689 503 MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSM 582 (652)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 582 (652)
+++++|.+++.... .+++..+..++.|++.||+|||+.+ ||+||||||+||+++.++.+||+|||++..... .
T Consensus 113 ~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~ 185 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----S 185 (360)
T ss_dssp CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH----H
T ss_pred CCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc----c
Confidence 99999999997654 6899999999999999999999831 899999999999999999999999999975521 1
Q ss_pred ccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc----------------------------------
Q 041689 583 TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV---------------------------------- 628 (652)
Q Consensus 583 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~---------------------------------- 628 (652)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 186 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (360)
T 3eqc_A 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN 265 (360)
T ss_dssp C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------------
T ss_pred cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccc
Confidence 2234568999999999999999999999999999999999999973
Q ss_pred ---------------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ---------------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ---------------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++|+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 322 (360)
T 3eqc_A 266 KFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 322 (360)
T ss_dssp --------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHH
T ss_pred ccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHH
Confidence 346789999999999999999874
No 151
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=348.27 Aligned_cols=221 Identities=16% Similarity=0.129 Sum_probs=191.4
Q ss_pred HhcCCCccceeccccceEEEEEE------eCCCcEEEEEEeecccchhhhhHHHHHHHHHhcC---CCeeeeEEeeeecC
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSR------IGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH---YRNLVKIISSCSNE 493 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~ 493 (652)
..++|.+.+.||+|+||.||+|. ..+++.||+|+++.. ....+..|+++++.++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 45779999999999999999994 446889999999754 3456778888888886 99999999999999
Q ss_pred CceEEEEEccCCCChhhhhhc----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCC---------
Q 041689 494 EFKELVLEHMPHGSLEKCLYS----SNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDD--------- 560 (652)
Q Consensus 494 ~~~~lv~e~~~~g~L~~~l~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~--------- 560 (652)
+..++||||+++|+|.+++.. ....+++..+..|+.|++.||+|||++ +|+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999874 234699999999999999999999999 9999999999999998
Q ss_pred --CCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch---------
Q 041689 561 --TMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS--------- 629 (652)
Q Consensus 561 --~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~--------- 629 (652)
++.+||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~ 296 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPE 296 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEEC
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceeec
Confidence 899999999999765433333444566799999999999999999999999999999999999988532
Q ss_pred ----------hhhhhhcccchhhhccccCc
Q 041689 630 ----------FVFNLAMECTIESLELRINA 649 (652)
Q Consensus 630 ----------~l~~l~~~~l~~~p~~Rpt~ 649 (652)
...+++.+|++.+|.+|++.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~ 326 (365)
T 3e7e_A 297 GLFRRLPHLDMWNEFFHVMLNIPDCHHLPS 326 (365)
T ss_dssp SCCTTCSSHHHHHHHHHHHHCCCCTTCCCC
T ss_pred hhccccCcHHHHHHHHHHHcCCCCCCcchH
Confidence 37789999999999999653
No 152
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=5.5e-40 Score=340.16 Aligned_cols=216 Identities=19% Similarity=0.284 Sum_probs=189.9
Q ss_pred hcCCCccceeccccceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHHhcC-CCeeeeEEeeeec--CCceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH-YRNLVKIISSCSN--EEFKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~--~~~~~lv 499 (652)
.++|++.+.||+|+||.||+|+. .+++.||+|+++.. ..+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 36789999999999999999986 46899999999743 3467889999999997 9999999999987 5678999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCC-cEEEecccCCccccCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM-VAHLSDFGITKLLIGE 578 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~-~~kl~Dfg~~~~~~~~ 578 (652)
|||+++++|.+++. .+++.++..++.|++.||+|||++ ||+||||||+||+++.++ .+||+|||+++.....
T Consensus 112 ~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 99999999999875 378899999999999999999999 999999999999999766 8999999999865322
Q ss_pred CCccccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCCc------------------------------
Q 041689 579 DQSMTQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQC------------------------------ 627 (652)
Q Consensus 579 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~------------------------------ 627 (652)
.......++..|+|||++.+ ..++.++||||+||++|||++|+.||
T Consensus 185 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 185 ---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp ---CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred ---CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 22344568999999999877 67899999999999999999999997
Q ss_pred -------------------------------chhhhhhhcccchhhhccccCccCC
Q 041689 628 -------------------------------VSFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 628 -------------------------------~~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+..+.+++.+||+.||++|||++|+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~ 317 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 317 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHH
Confidence 4557889999999999999999874
No 153
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.3e-40 Score=363.27 Aligned_cols=224 Identities=25% Similarity=0.394 Sum_probs=196.0
Q ss_pred hcCCCccceeccccceEEEEEEeCC-CcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 502 (652)
..+|.+.+.||+|+||.||+|++.. +..||||+++... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 4568889999999999999999764 8899999997553 3457899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCc
Q 041689 503 MPHGSLEKCLYSSN-CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 503 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 581 (652)
+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~ 373 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TY 373 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTC-CE
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCC-ce
Confidence 99999999997643 3689999999999999999999999 9999999999999999999999999999865322 11
Q ss_pred cccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------hhhhhhhc
Q 041689 582 MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------SFVFNLAM 636 (652)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~~l~~l~~ 636 (652)
.......+++.|+|||++..+.++.++|||||||++|||++ |+.||. ..+.+++.
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 453 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 453 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence 22233446788999999999999999999999999999999 888853 34789999
Q ss_pred ccchhhhccccCccCC
Q 041689 637 ECTIESLELRINAKEI 652 (652)
Q Consensus 637 ~~l~~~p~~Rpt~~ei 652 (652)
+||+.||++|||++||
T Consensus 454 ~cl~~dP~~RPs~~el 469 (495)
T 1opk_A 454 ACWQWNPSDRPSFAEI 469 (495)
T ss_dssp HHTCSSGGGSCCHHHH
T ss_pred HHcCcChhHCcCHHHH
Confidence 9999999999999874
No 154
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.2e-40 Score=332.88 Aligned_cols=217 Identities=22% Similarity=0.344 Sum_probs=190.3
Q ss_pred cCCCccceeccccceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecC--CceEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNE--EFKELVL 500 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 500 (652)
++|.+.+.||+|+||.||+|++. ++.||||+++... ....+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 56889999999999999999984 8899999997552 34456789999999999999999999999877 7889999
Q ss_pred EccCCCChhhhhhcCCC-CCCHHHHHHHHHHHHHHHHHHHcCCCCC--eEecCCCCCCeeeCCCCcEEEecccCCccccC
Q 041689 501 EHMPHGSLEKCLYSSNC-ILDIFQRLNIMIDVASVLEYLHFNFLVP--VIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 577 (652)
||+++|+|.+++..... .+++.++..++.|++.||+|||++ + |+||||||+||+++.++.++|+|||++....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~- 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ- 164 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeec-
Confidence 99999999999987654 589999999999999999999998 8 9999999999999999999999999876421
Q ss_pred CCCccccccccCCccccCccccccCccCc---ccchhhHHHHHHHHHhCCCCcch-------------------------
Q 041689 578 EDQSMTQTQTLATIGYIAPEYGREGRVFA---NGDVYSFGIMLMEIHSAKQQCVS------------------------- 629 (652)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDvwslG~vl~elltg~~p~~~------------------------- 629 (652)
.....+|+.|+|||++.+..++. ++|||||||++|||++|+.||..
T Consensus 165 ------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (271)
T 3kmu_A 165 ------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISP 238 (271)
T ss_dssp ------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCH
T ss_pred ------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCH
Confidence 12346899999999988766554 79999999999999999999643
Q ss_pred hhhhhhcccchhhhccccCccCC
Q 041689 630 FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 239 ~~~~li~~~l~~~p~~Rps~~~i 261 (271)
T 3kmu_A 239 HVSKLMKICMNEDPAKRPKFDMI 261 (271)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHH
Confidence 37889999999999999999864
No 155
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.6e-40 Score=353.87 Aligned_cols=195 Identities=22% Similarity=0.295 Sum_probs=164.8
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecC-----Cc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNE-----EF 495 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~ 495 (652)
.++|.+.+.||+|+||.||+|++. +++.||||+++.. .....+.+.+|++++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999865 5889999999753 233456788999999999999999999998766 57
Q ss_pred eEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccc
Q 041689 496 KELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL 575 (652)
Q Consensus 496 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 575 (652)
.|+||||++ ++|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999997 59999987654 699999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCc--------------------cccccccCCccccCcccc-ccCccCcccchhhHHHHHHHHHhC
Q 041689 576 IGEDQS--------------------MTQTQTLATIGYIAPEYG-REGRVFANGDVYSFGIMLMEIHSA 623 (652)
Q Consensus 576 ~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG~vl~elltg 623 (652)
...... ......+||+.|+|||++ ....++.++||||+||++|||++|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g 248 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNM 248 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhc
Confidence 432211 122456799999999985 566799999999999999999974
No 156
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5e-40 Score=337.95 Aligned_cols=224 Identities=26% Similarity=0.349 Sum_probs=192.5
Q ss_pred HHhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 422 RATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 422 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
...++|++.+.||+|+||.||+|... +|+.||+|++.... ..+.+.+|++++++++||||+++++++...+..++||
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 34567999999999999999999875 58999999997643 3467889999999999999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
||+++++|.+++......+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||.+......
T Consensus 104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-- 178 (314)
T 3com_A 104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT-- 178 (314)
T ss_dssp ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTT--
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhh--
Confidence 99999999999875555799999999999999999999999 9999999999999999999999999999865322
Q ss_pred ccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc--------------------------hhhhhh
Q 041689 581 SMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV--------------------------SFVFNL 634 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~--------------------------~~l~~l 634 (652)
........|++.|+|||++.+..++.++||||||+++|||++|+.||. ..+.++
T Consensus 179 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 258 (314)
T 3com_A 179 MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDF 258 (314)
T ss_dssp BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHH
T ss_pred ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHH
Confidence 122334568999999999999999999999999999999999999863 347889
Q ss_pred hcccchhhhccccCccCC
Q 041689 635 AMECTIESLELRINAKEI 652 (652)
Q Consensus 635 ~~~~l~~~p~~Rpt~~ei 652 (652)
+.+||..||++|||++|+
T Consensus 259 i~~~l~~dp~~Rpt~~~l 276 (314)
T 3com_A 259 VKQCLVKSPEQRATATQL 276 (314)
T ss_dssp HHHHTCSCTTTSCCHHHH
T ss_pred HHHHccCChhhCcCHHHH
Confidence 999999999999999864
No 157
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=5.6e-40 Score=344.49 Aligned_cols=228 Identities=25% Similarity=0.341 Sum_probs=197.2
Q ss_pred HHHHHHhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccc--------hhhhhHHHHHHHHHhc-CCCeeeeEE
Q 041689 418 LEVCRATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCG--------RAFKSFDIECEIMKSI-HYRNLVKII 487 (652)
Q Consensus 418 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~~~ 487 (652)
.......++|.+.+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|+.+++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 334455677999999999999999999975 699999999975431 2245678899999999 799999999
Q ss_pred eeeecCCceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEe
Q 041689 488 SSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLS 567 (652)
Q Consensus 488 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~ 567 (652)
+++...+..++||||+++++|.+++.... .+++..+..++.|++.||.|||+. ||+||||||+||+++.++.+||+
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEE
Confidence 99999999999999999999999987654 689999999999999999999999 99999999999999999999999
Q ss_pred cccCCccccCCCCccccccccCCccccCcccccc------CccCcccchhhHHHHHHHHHhCCCCcch------------
Q 041689 568 DFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE------GRVFANGDVYSFGIMLMEIHSAKQQCVS------------ 629 (652)
Q Consensus 568 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwslG~vl~elltg~~p~~~------------ 629 (652)
|||++..+... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 243 DfG~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~ 319 (365)
T 2y7j_A 243 DFGFSCHLEPG---EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME 319 (365)
T ss_dssp CCTTCEECCTT---CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred ecCcccccCCC---cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 99999876322 22344679999999998753 3588999999999999999999999632
Q ss_pred ---------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ---------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ---------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||..||++|||++|+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~el 357 (365)
T 2y7j_A 320 GQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQA 357 (365)
T ss_dssp TCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred CCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 27889999999999999999864
No 158
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1e-40 Score=336.99 Aligned_cols=224 Identities=25% Similarity=0.375 Sum_probs=193.9
Q ss_pred HhcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEc
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 502 (652)
..++|++.+.||+|+||.||+|+..++..||+|+++... ...+.+.+|++++++++||||+++++++.. +..++||||
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 88 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence 446789999999999999999998888899999997543 345678999999999999999999999864 468899999
Q ss_pred cCCCChhhhhhcCCC-CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCc
Q 041689 503 MPHGSLEKCLYSSNC-ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 503 ~~~g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 581 (652)
+++++|.+++..... .+++.++..++.|++.||+|||++ ||+||||||+||++++++.+||+|||.+....... .
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 164 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-Y 164 (279)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-E
T ss_pred CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcc-c
Confidence 999999999875432 589999999999999999999999 99999999999999999999999999998763221 1
Q ss_pred cccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch------------------------hhhhhhc
Q 041689 582 MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS------------------------FVFNLAM 636 (652)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~------------------------~l~~l~~ 636 (652)
.......+++.|+|||++.++.++.++||||||+++|||++ |+.||.. .+.+++.
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 244 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 244 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHHHH
Confidence 22233456788999999988899999999999999999999 8888642 4778999
Q ss_pred ccchhhhccccCccCC
Q 041689 637 ECTIESLELRINAKEI 652 (652)
Q Consensus 637 ~~l~~~p~~Rpt~~ei 652 (652)
+||+.||++|||++||
T Consensus 245 ~~l~~~p~~Rps~~~l 260 (279)
T 1qpc_A 245 LCWKERPEDRPTFDYL 260 (279)
T ss_dssp HHTCSSGGGSCCHHHH
T ss_pred HHhccChhhCCCHHHH
Confidence 9999999999998764
No 159
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-40 Score=334.50 Aligned_cols=224 Identities=24% Similarity=0.355 Sum_probs=192.5
Q ss_pred cCCCccc-eeccccceEEEEEEeC---CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 425 YGFNENN-LIGKGGFGTIYKSRIG---DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 425 ~~y~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
++|.+.+ .||+|+||.||+|... ++..||+|+++... ....+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4566665 9999999999999753 57889999997643 34567789999999999999999999999 45568999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|||+++++|.+++......+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 999999999999987666799999999999999999999999 99999999999999999999999999998763322
Q ss_pred Ccc-ccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------hhhhh
Q 041689 580 QSM-TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------SFVFN 633 (652)
Q Consensus 580 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~~l~~ 633 (652)
... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||. ..+.+
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 244 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYA 244 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHHHHH
Confidence 211 1223346889999999988899999999999999999998 998864 33788
Q ss_pred hhcccchhhhccccCccCC
Q 041689 634 LAMECTIESLELRINAKEI 652 (652)
Q Consensus 634 l~~~~l~~~p~~Rpt~~ei 652 (652)
++.+||+.||++||+++||
T Consensus 245 li~~~l~~~p~~Rps~~~l 263 (287)
T 1u59_A 245 LMSDCWIYKWEDRPDFLTV 263 (287)
T ss_dssp HHHHTTCSSGGGSCCHHHH
T ss_pred HHHHHcCCChhhCcCHHHH
Confidence 9999999999999999864
No 160
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.2e-40 Score=345.57 Aligned_cols=228 Identities=22% Similarity=0.347 Sum_probs=196.2
Q ss_pred HHhcCCCccceeccccceEEEEEEeCC-C-----cEEEEEEeeccc-chhhhhHHHHHHHHHhc-CCCeeeeEEeeeecC
Q 041689 422 RATYGFNENNLIGKGGFGTIYKSRIGD-G-----MEVAVKVFHLQC-GRAFKSFDIECEIMKSI-HYRNLVKIISSCSNE 493 (652)
Q Consensus 422 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 493 (652)
...++|.+.+.||+|+||.||+|.... + ..||+|+++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 345789999999999999999998642 2 479999997553 23456789999999999 899999999999999
Q ss_pred CceEEEEEccCCCChhhhhhcC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCC
Q 041689 494 EFKELVLEHMPHGSLEKCLYSS-------------NCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDD 560 (652)
Q Consensus 494 ~~~~lv~e~~~~g~L~~~l~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~ 560 (652)
+..++||||+++|+|.+++... ...+++..+..++.|++.||+|||++ ||+||||||+||+++.
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTN 199 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEG
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECC
Confidence 9999999999999999998743 22578999999999999999999999 9999999999999999
Q ss_pred CCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch----------
Q 041689 561 TMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS---------- 629 (652)
Q Consensus 561 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~---------- 629 (652)
++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 279 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHH
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHH
Confidence 99999999999986644333333334557889999999998899999999999999999998 8888643
Q ss_pred ---------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ---------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ---------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 280 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 317 (333)
T 2i1m_A 280 VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317 (333)
T ss_dssp HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHH
Confidence 36789999999999999999874
No 161
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-40 Score=338.30 Aligned_cols=218 Identities=25% Similarity=0.356 Sum_probs=183.4
Q ss_pred cCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEccC
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMP 504 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 504 (652)
.+|++.+.||+|+||.||+|++. ++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 56888999999999999999884 788999998643 345778999999999999999999998874 4789999999
Q ss_pred CCChhhhhhcCCC--CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCc-EEEecccCCccccCCCCc
Q 041689 505 HGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMV-AHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 505 ~g~L~~~l~~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~-~kl~Dfg~~~~~~~~~~~ 581 (652)
+|+|.+++..... .+++..+..++.|+++||+|||+.+..||+||||||+||+++.++. +||+|||++.....
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~---- 158 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT---- 158 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc----
Confidence 9999999986553 4788999999999999999999932229999999999999988876 79999999975421
Q ss_pred cccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch--------------------------hhhhhh
Q 041689 582 MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS--------------------------FVFNLA 635 (652)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~--------------------------~l~~l~ 635 (652)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.. .+.+++
T Consensus 159 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 237 (307)
T 2eva_A 159 -HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLM 237 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHH
T ss_pred -ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHH
Confidence 12234589999999999999999999999999999999999999752 367899
Q ss_pred cccchhhhccccCccCC
Q 041689 636 MECTIESLELRINAKEI 652 (652)
Q Consensus 636 ~~~l~~~p~~Rpt~~ei 652 (652)
.+||+.||++|||++||
T Consensus 238 ~~~l~~dp~~Rps~~el 254 (307)
T 2eva_A 238 TRCWSKDPSQRPSMEEI 254 (307)
T ss_dssp HHHTCSSGGGSCCHHHH
T ss_pred HHHhcCChhhCcCHHHH
Confidence 99999999999999864
No 162
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=6.7e-39 Score=372.65 Aligned_cols=229 Identities=25% Similarity=0.257 Sum_probs=126.6
Q ss_pred CcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccccCCCCCcEEEccC
Q 041689 122 LEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGG 201 (652)
Q Consensus 122 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 201 (652)
|+.|+|++|.+.+..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 268 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 347 (844)
T 3j0a_A 268 VRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQK 347 (844)
T ss_dssp CCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCS
T ss_pred ccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCC
Confidence 44445555555545555555566666666666666655555566666666666666666655555666666666666666
Q ss_pred CcccccccccCCCCCCCCEEEccCCC-CCCCc-----------------------------------------ccCCCCc
Q 041689 202 NKLSGSILTCFSNLASLRTLSLSYND-GPLPL-----------------------------------------EIGNLKV 239 (652)
Q Consensus 202 N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~-----------------------------------------~~~~l~~ 239 (652)
|+++++.+..|..+++|++|+|++|. ..++. .+.++++
T Consensus 348 N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~ 427 (844)
T 3j0a_A 348 NHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPH 427 (844)
T ss_dssp CCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTT
T ss_pred CCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCc
Confidence 66665555556666666666666553 11110 0113444
Q ss_pred cceEecccccCCccCcc-cccCCCCCcEEEccCCcCC-----CcccccccccccCcceeccccccCCCCchhhcCCCCCc
Q 041689 240 LIGIDFSMNNFSSVIPT-TIGSLKDLQYLFLGYNILK-----GSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLE 313 (652)
Q Consensus 240 L~~L~ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 313 (652)
|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|..+++|+.|+|++|+|++..|..|.++++|+
T Consensus 428 L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 507 (844)
T 3j0a_A 428 LQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALR 507 (844)
T ss_dssp CCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCS
T ss_pred cceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhh
Confidence 44455554444432211 1222333333333333333 12233455666666666666666666666666666666
Q ss_pred eEEeecCcCcccCCCC--------------------CCCCCcccccccCCccCCCCC
Q 041689 314 HLNLSFNKLEGEIPKG--------------------GSFGNFSAESFEGNKLLCGSP 350 (652)
Q Consensus 314 ~L~L~~N~l~~~~p~~--------------------~~~~~l~~~~~~~N~~~c~~~ 350 (652)
.|+|++|++++.+|.. ..+..++.+++.+|||.|..+
T Consensus 508 ~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 508 GLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECE 564 (844)
T ss_dssp EEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSS
T ss_pred eeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccccc
Confidence 6666666666544321 235577888999999999554
No 163
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-40 Score=346.56 Aligned_cols=218 Identities=23% Similarity=0.293 Sum_probs=184.2
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCC------
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEE------ 494 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 494 (652)
..+|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|++++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 467999999999999999999874 6999999998543 2334567889999999999999999999987653
Q ss_pred ceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcc
Q 041689 495 FKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL 574 (652)
Q Consensus 495 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~ 574 (652)
..|+||||+ +++|.+++... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 469999999 78999998764 589999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCccccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCCcc-------------------------
Q 041689 575 LIGEDQSMTQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQCV------------------------- 628 (652)
Q Consensus 575 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~------------------------- 628 (652)
... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.
T Consensus 178 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 178 ADS-----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp CCS-----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred ccc-----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 522 2334578999999999877 679999999999999999999999974
Q ss_pred -----------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 -----------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 -----------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||..||++|||++|+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~ 305 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA 305 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred hhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHH
Confidence 235689999999999999999763
No 164
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=347.18 Aligned_cols=224 Identities=20% Similarity=0.219 Sum_probs=185.9
Q ss_pred hcCCCccceeccccceEEEEEEeC----CCcEEEEEEeecccch-----------hhhhHHHHHHHHHhcCCCeeeeEEe
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG----DGMEVAVKVFHLQCGR-----------AFKSFDIECEIMKSIHYRNLVKIIS 488 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~~~ 488 (652)
.++|.+.+.||+|+||.||+|+.. ++..||+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 367999999999999999999875 5788999998754321 1224567888999999999999999
Q ss_pred eeec----CCceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCC--
Q 041689 489 SCSN----EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM-- 562 (652)
Q Consensus 489 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~-- 562 (652)
++.. ....++||||+ +++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCC
Confidence 9877 67899999999 999999988765 799999999999999999999999 999999999999998877
Q ss_pred cEEEecccCCccccCCCC-----ccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch--------
Q 041689 563 VAHLSDFGITKLLIGEDQ-----SMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS-------- 629 (652)
Q Consensus 563 ~~kl~Dfg~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~-------- 629 (652)
.+||+|||+++.+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 999999999986532211 1112345699999999999999999999999999999999999999844
Q ss_pred --------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 --------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 --------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 319 (345)
T 2v62_A 271 QTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQAL 319 (345)
T ss_dssp HHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred HHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHH
Confidence 46789999999999999999874
No 165
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.7e-40 Score=334.30 Aligned_cols=221 Identities=19% Similarity=0.249 Sum_probs=191.4
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCceEE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEFKEL 498 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 498 (652)
..++|++.+.||+|+||.||+|+.. +++.||+|+++.. .......+.+|+..+.++ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3467999999999999999999876 7999999999754 233456788899999999 99999999999999999999
Q ss_pred EEEccCCCChhhhhhcCC---CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCC---------------
Q 041689 499 VLEHMPHGSLEKCLYSSN---CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDD--------------- 560 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~--------------- 560 (652)
||||+++++|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999987542 3689999999999999999999999 9999999999999984
Q ss_pred ----CCcEEEecccCCccccCCCCccccccccCCccccCccccccC-ccCcccchhhHHHHHHHHHhCCCC---------
Q 041689 561 ----TMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG-RVFANGDVYSFGIMLMEIHSAKQQ--------- 626 (652)
Q Consensus 561 ----~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p--------- 626 (652)
...+||+|||.+...... ....||+.|+|||++.+. .++.++|||||||++|||++|.+|
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~ 239 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE 239 (289)
T ss_dssp ----CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHH
T ss_pred ccCCceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHH
Confidence 447999999999865321 223589999999998766 566899999999999999999875
Q ss_pred ------------cchhhhhhhcccchhhhccccCccCC
Q 041689 627 ------------CVSFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 627 ------------~~~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
++..+.+++.+||+.||++|||++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l 277 (289)
T 1x8b_A 240 IRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMAL 277 (289)
T ss_dssp HHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHH
Confidence 34558999999999999999999874
No 166
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3.3e-40 Score=352.56 Aligned_cols=222 Identities=23% Similarity=0.274 Sum_probs=182.8
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc--------chhhhhHHHHHHHHHhcCCCeeeeEEeeeecC
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC--------GRAFKSFDIECEIMKSIHYRNLVKIISSCSNE 493 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 493 (652)
..++|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 4578999999999999999999865 68999999997542 1223458899999999999999999999864
Q ss_pred CceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCC---CcEEEeccc
Q 041689 494 EFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDT---MVAHLSDFG 570 (652)
Q Consensus 494 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~---~~~kl~Dfg 570 (652)
+..++||||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.+ +.+||+|||
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeecc
Confidence 45789999999999999887654 689999999999999999999999 99999999999999754 459999999
Q ss_pred CCccccCCCCccccccccCCccccCcccccc---CccCcccchhhHHHHHHHHHhCCCCcch------------------
Q 041689 571 ITKLLIGEDQSMTQTQTLATIGYIAPEYGRE---GRVFANGDVYSFGIMLMEIHSAKQQCVS------------------ 629 (652)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~vl~elltg~~p~~~------------------ 629 (652)
+++.... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 288 ~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~ 364 (419)
T 3i6u_A 288 HSKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 364 (419)
T ss_dssp TTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCC
T ss_pred cceecCC---CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCC
Confidence 9986532 222344679999999999853 5788999999999999999999999642
Q ss_pred ----------hhhhhhcccchhhhccccCccCC
Q 041689 630 ----------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ----------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 365 ~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~ 397 (419)
T 3i6u_A 365 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 397 (419)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred CchhhcccCHHHHHHHHHHccCChhHCcCHHHH
Confidence 36789999999999999999864
No 167
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=341.66 Aligned_cols=226 Identities=27% Similarity=0.424 Sum_probs=195.5
Q ss_pred hcCCCccceeccccceEEEEEEe-----CCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCC--ce
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI-----GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEE--FK 496 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~ 496 (652)
..+|++.+.||+|+||.||+|+. .+++.||+|++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 35688999999999999999983 368899999998766666778999999999999999999999987654 78
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcccc
Q 041689 497 ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576 (652)
Q Consensus 497 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 576 (652)
++||||+++++|.+++......+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 999999999999999988766799999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCccc-cccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc---------------------------
Q 041689 577 GEDQSMT-QTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV--------------------------- 628 (652)
Q Consensus 577 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~--------------------------- 628 (652)
....... .....++..|+|||++.+..++.++|||||||++|||++|..|+.
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 276 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHh
Confidence 3322111 223457788999999998899999999999999999999977643
Q ss_pred -------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 -------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 -------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++||
T Consensus 277 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el 313 (326)
T 2w1i_A 277 KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 313 (326)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred hcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHH
Confidence 346789999999999999999874
No 168
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.1e-40 Score=334.79 Aligned_cols=224 Identities=21% Similarity=0.268 Sum_probs=189.2
Q ss_pred HhcCCCccceeccccceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeee-ecCCceEEEE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSC-SNEEFKELVL 500 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~ 500 (652)
..++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+|++++++++|++++..++++ ..++..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999986 478999999876543 335688999999999988776666554 6677889999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee---CCCCcEEEecccCCccccC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~ 577 (652)
||+ +++|.+++......+++.++..++.|++.||+|||++ +|+||||||+||++ ++++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 8899999986666799999999999999999999999 99999999999999 7889999999999987643
Q ss_pred CCCc-----cccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc------------------------
Q 041689 578 EDQS-----MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV------------------------ 628 (652)
Q Consensus 578 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~------------------------ 628 (652)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 240 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhh
Confidence 3221 12234568999999999999999999999999999999999999974
Q ss_pred -------hhhhhhhcccchhhhccccCccCC
Q 041689 629 -------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 -------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++||
T Consensus 241 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l 271 (296)
T 4hgt_A 241 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYL 271 (296)
T ss_dssp HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHH
T ss_pred hhhccCCHHHHHHHHHHHhcCCCCCCCHHHH
Confidence 347899999999999999999764
No 169
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=4.5e-40 Score=331.71 Aligned_cols=222 Identities=23% Similarity=0.293 Sum_probs=187.7
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
.++|.+.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 367999999999999999999976 69999999997542 23355788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|||+++++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+......
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~- 164 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG- 164 (276)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCC-
Confidence 99999999999987654 689999999999999999999999 9999999999999999999999999999865321
Q ss_pred CccccccccCCccccCccccccCcc-CcccchhhHHHHHHHHHhCCCCcc-----------------------hhhhhhh
Q 041689 580 QSMTQTQTLATIGYIAPEYGREGRV-FANGDVYSFGIMLMEIHSAKQQCV-----------------------SFVFNLA 635 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~p~~-----------------------~~l~~l~ 635 (652)
.......+++.|+|||.+.+..+ +.++||||+|+++|||++|+.||. ..+.+++
T Consensus 165 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 242 (276)
T 2h6d_A 165 --EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLL 242 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred --cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCchhcCHHHHHHH
Confidence 22234568999999999887765 588999999999999999999964 3478899
Q ss_pred cccchhhhccccCccCC
Q 041689 636 MECTIESLELRINAKEI 652 (652)
Q Consensus 636 ~~~l~~~p~~Rpt~~ei 652 (652)
.+||+.||++|||++||
T Consensus 243 ~~~l~~~p~~Rps~~~~ 259 (276)
T 2h6d_A 243 MHMLQVDPLKRATIKDI 259 (276)
T ss_dssp HHHTCSSGGGSCCHHHH
T ss_pred HHHccCChhhCCCHHHH
Confidence 99999999999999874
No 170
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.3e-40 Score=334.83 Aligned_cols=225 Identities=24% Similarity=0.356 Sum_probs=191.0
Q ss_pred HhcCCCccceeccccceEEEEEEeCC----CcEEEEEEeecc-cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIGD----GMEVAVKVFHLQ-CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKE 497 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 497 (652)
..++|.+.+.||+|+||.||+|++.. +..||+|+++.. .....+.+.+|++++++++||||+++++++.++ ..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 34678899999999999999998532 346999999765 234567789999999999999999999998654 568
Q ss_pred EEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccC
Q 041689 498 LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 577 (652)
+||||+++++|.+++......+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 99999999999999987666799999999999999999999999 999999999999999999999999999986532
Q ss_pred CCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------hhhh
Q 041689 578 EDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------SFVF 632 (652)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~~l~ 632 (652)
.. ........+++.|+|||++.+..++.++|||||||++|||++ |+.||. ..+.
T Consensus 166 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 244 (281)
T 3cc6_A 166 ED-YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLY 244 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHHH
T ss_pred cc-ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHHH
Confidence 21 112234457889999999988899999999999999999998 999863 2378
Q ss_pred hhhcccchhhhccccCccCC
Q 041689 633 NLAMECTIESLELRINAKEI 652 (652)
Q Consensus 633 ~l~~~~l~~~p~~Rpt~~ei 652 (652)
+++.+||+.||++|||++||
T Consensus 245 ~li~~~l~~~p~~Rps~~el 264 (281)
T 3cc6_A 245 TLMTRCWDYDPSDRPRFTEL 264 (281)
T ss_dssp HHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHccCCchhCcCHHHH
Confidence 99999999999999999874
No 171
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=4.6e-41 Score=354.74 Aligned_cols=219 Identities=16% Similarity=0.163 Sum_probs=182.6
Q ss_pred hcCCCccceeccccceEEEEEEe-CCCcEEEEEEeecc---cchhhhhHHHHHH---HHHhcCCCeeeeEE-------ee
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQ---CGRAFKSFDIECE---IMKSIHYRNLVKII-------SS 489 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~h~niv~~~-------~~ 489 (652)
.++|.+.+.||+|+||.||+|++ .+|+.||||++... .....+.+.+|++ ++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999996 46999999999743 3345678889994 55556899999998 55
Q ss_pred eecCC-----------------ceEEEEEccCCCChhhhhhcCCC------CCCHHHHHHHHHHHHHHHHHHHcCCCCCe
Q 041689 490 CSNEE-----------------FKELVLEHMPHGSLEKCLYSSNC------ILDIFQRLNIMIDVASVLEYLHFNFLVPV 546 (652)
Q Consensus 490 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~------~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 546 (652)
+...+ ..|+||||+ +|+|.+++..... .+++..+..|+.|++.||+|||++ ||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 55443 278999999 6799999875431 223578888999999999999999 99
Q ss_pred EecCCCCCCeeeCCCCcEEEecccCCccccCCCCccccccccCCccccCccccccC-----------ccCcccchhhHHH
Q 041689 547 IHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG-----------RVFANGDVYSFGI 615 (652)
Q Consensus 547 iH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwslG~ 615 (652)
+||||||+||+++.++.+||+|||+++... .......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~-----~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG-----ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT-----CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC-----CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 999999999999999999999999998531 12334567 999999999887 8999999999999
Q ss_pred HHHHHHhCCCCcch-------------------hhhhhhcccchhhhccccCccCC
Q 041689 616 MLMEIHSAKQQCVS-------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 616 vl~elltg~~p~~~-------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
++|||++|+.||.. .+.+++.+||+.||++|||+.|+
T Consensus 302 il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~ 357 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQA 357 (377)
T ss_dssp HHHHHHHSSCCC------CCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHH
T ss_pred HHHHHHHCCCCCcccccccchhhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHH
Confidence 99999999999643 47899999999999999999864
No 172
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=5.3e-40 Score=345.74 Aligned_cols=219 Identities=22% Similarity=0.227 Sum_probs=182.2
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCC------
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEE------ 494 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 494 (652)
.++|.+.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367999999999999999999865 6899999999754 2334567889999999999999999999987654
Q ss_pred ceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcc
Q 041689 495 FKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL 574 (652)
Q Consensus 495 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~ 574 (652)
..++||||+++ ++.+++.. .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 68999999975 78887753 488999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc--------------------------
Q 041689 575 LIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV-------------------------- 628 (652)
Q Consensus 575 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~-------------------------- 628 (652)
... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 177 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 177 AGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTS
T ss_pred ccc---ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 522 122334578999999999999999999999999999999999999873
Q ss_pred ---------------------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ---------------------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ---------------------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||..||++|||++|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~ 316 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 316 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHH
Confidence 246789999999999999999874
No 173
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=8.8e-40 Score=332.17 Aligned_cols=218 Identities=24% Similarity=0.344 Sum_probs=188.7
Q ss_pred CCCccceeccccceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHHhcCCCeeeeEEeeeec----CCceEE
Q 041689 426 GFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISSCSN----EEFKEL 498 (652)
Q Consensus 426 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~l 498 (652)
.|.+.+.||+|+||.||+|.+. ++..||+|++... .....+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 3677889999999999999865 6888999999754 23445678999999999999999999998764 456899
Q ss_pred EEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCC--eEecCCCCCCeeeC-CCCcEEEecccCCccc
Q 041689 499 VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVP--VIHCDLKPSNVLLD-DTMVAHLSDFGITKLL 575 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~dlkp~NIll~-~~~~~kl~Dfg~~~~~ 575 (652)
||||+++++|.+++.... .+++..+..++.|++.||+|||+. + |+||||||+||+++ +++.+||+|||++...
T Consensus 107 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999999997654 689999999999999999999998 7 99999999999997 7899999999999754
Q ss_pred cCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch--------------------------
Q 041689 576 IGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS-------------------------- 629 (652)
Q Consensus 576 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~-------------------------- 629 (652)
. ........||+.|+|||++. +.++.++||||+||++|+|++|+.||..
T Consensus 183 ~----~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (290)
T 1t4h_A 183 R----ASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP 257 (290)
T ss_dssp C----TTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCH
T ss_pred c----ccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCH
Confidence 2 12233456899999999876 5689999999999999999999999643
Q ss_pred hhhhhhcccchhhhccccCccCC
Q 041689 630 FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 258 ~l~~li~~~l~~dp~~Rps~~el 280 (290)
T 1t4h_A 258 EVKEIIEGCIRQNKDERYSIKDL 280 (290)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHHHHHHHccCChhhCCCHHHH
Confidence 37889999999999999999874
No 174
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=4.2e-40 Score=359.16 Aligned_cols=221 Identities=25% Similarity=0.319 Sum_probs=192.2
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
.++|++.+.||+|+||.||+|+.. +++.||||++... .......+.+|++++++++||||+++++++.+.+..|+||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 356999999999999999999875 6899999999654 2334567889999999999999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeC---CCCcEEEecccCCccccC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLD---DTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~---~~~~~kl~Dfg~~~~~~~ 577 (652)
||+++|+|.+++.... .+++.++..++.|++.||.|||++ ||+||||||+||+++ .++.+||+|||+++....
T Consensus 101 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999999887654 689999999999999999999999 999999999999995 556899999999986532
Q ss_pred CCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc---------------------------hh
Q 041689 578 EDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV---------------------------SF 630 (652)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~---------------------------~~ 630 (652)
. .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||. +.
T Consensus 177 ~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 252 (486)
T 3mwu_A 177 N---TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDD 252 (486)
T ss_dssp C-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHH
T ss_pred C---CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHH
Confidence 2 22344579999999999875 69999999999999999999999962 23
Q ss_pred hhhhhcccchhhhccccCccCC
Q 041689 631 VFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 631 l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+.+++.+||..||++|||++|+
T Consensus 253 ~~~li~~~L~~dp~~R~t~~~~ 274 (486)
T 3mwu_A 253 AKDLIRKMLTFHPSLRITATQC 274 (486)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHH
Confidence 7899999999999999999764
No 175
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=9.8e-40 Score=332.57 Aligned_cols=221 Identities=25% Similarity=0.371 Sum_probs=188.6
Q ss_pred CCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEccCC
Q 041689 427 FNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPH 505 (652)
Q Consensus 427 y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 505 (652)
|.....||+|+||.||+|+.. +++.||+|.+........+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 103 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence 445569999999999999864 6889999999876656667899999999999999999999999999999999999999
Q ss_pred CChhhhhhcCCC--CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCC-CCcEEEecccCCccccCCCCcc
Q 041689 506 GSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDD-TMVAHLSDFGITKLLIGEDQSM 582 (652)
Q Consensus 506 g~L~~~l~~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~-~~~~kl~Dfg~~~~~~~~~~~~ 582 (652)
++|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++. ++.+||+|||.++..... ..
T Consensus 104 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~--~~ 178 (295)
T 2clq_A 104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI--NP 178 (295)
T ss_dssp EEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----
T ss_pred CCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCC--CC
Confidence 999999876533 467888999999999999999999 9999999999999987 899999999999865321 12
Q ss_pred ccccccCCccccCccccccCc--cCcccchhhHHHHHHHHHhCCCCcch--------------------------hhhhh
Q 041689 583 TQTQTLATIGYIAPEYGREGR--VFANGDVYSFGIMLMEIHSAKQQCVS--------------------------FVFNL 634 (652)
Q Consensus 583 ~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~vl~elltg~~p~~~--------------------------~l~~l 634 (652)
......|++.|+|||++.+.. ++.++||||||+++|||++|+.||.. .+.++
T Consensus 179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 258 (295)
T 2clq_A 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAF 258 (295)
T ss_dssp --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHH
T ss_pred cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHH
Confidence 233456899999999987654 78999999999999999999999642 26789
Q ss_pred hcccchhhhccccCccCC
Q 041689 635 AMECTIESLELRINAKEI 652 (652)
Q Consensus 635 ~~~~l~~~p~~Rpt~~ei 652 (652)
+.+||..||++|||++|+
T Consensus 259 i~~~l~~dp~~Rps~~~l 276 (295)
T 2clq_A 259 ILKCFEPDPDKRACANDL 276 (295)
T ss_dssp HHHTTCSSTTTSCCHHHH
T ss_pred HHHHccCChhhCCCHHHH
Confidence 999999999999999764
No 176
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.5e-40 Score=339.91 Aligned_cols=225 Identities=21% Similarity=0.303 Sum_probs=191.3
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 501 (652)
..++|++.+.||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3467999999999999999999976 589999999976655667788999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCc
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 581 (652)
|+++++|.+++......+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||++..... ..
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--~~ 171 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK--TL 171 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH--HH
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccc--cc
Confidence 9999999999877555799999999999999999999999 999999999999999999999999998754311 11
Q ss_pred cccccccCCccccCcccc-----ccCccCcccchhhHHHHHHHHHhCCCCcch--------------------------h
Q 041689 582 MTQTQTLATIGYIAPEYG-----REGRVFANGDVYSFGIMLMEIHSAKQQCVS--------------------------F 630 (652)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDvwslG~vl~elltg~~p~~~--------------------------~ 630 (652)
.......||+.|+|||++ ....++.++|||||||++|||++|+.||.. .
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVE 251 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHH
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHH
Confidence 112334689999999987 466788999999999999999999998542 3
Q ss_pred hhhhhcccchhhhccccCccCC
Q 041689 631 VFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 631 l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+.+++.+||+.||++|||++||
T Consensus 252 l~~li~~~l~~dp~~Rps~~~l 273 (302)
T 2j7t_A 252 FRDFLKIALDKNPETRPSAAQL 273 (302)
T ss_dssp HHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHcccChhhCCCHHHH
Confidence 6889999999999999999764
No 177
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.3e-40 Score=336.67 Aligned_cols=226 Identities=23% Similarity=0.388 Sum_probs=189.7
Q ss_pred hcCCCccceeccccceEEEEEEeCC----CcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeee-ecCCceE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGD----GMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSC-SNEEFKE 497 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~ 497 (652)
..+|.+.+.||+|+||.||+|+..+ +..||+|.+.... ....+.+.+|++++++++||||+++++++ ..++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 4568888999999999999998542 3358999987542 34456789999999999999999999985 4556889
Q ss_pred EEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccC
Q 041689 498 LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 577 (652)
+||||+++|+|.+++......+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++....
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999999987666789999999999999999999999 999999999999999999999999999986532
Q ss_pred CCC--ccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhC-CCCc------------------------chh
Q 041689 578 EDQ--SMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSA-KQQC------------------------VSF 630 (652)
Q Consensus 578 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg-~~p~------------------------~~~ 630 (652)
... ........+|+.|+|||.+.+..++.++||||+||++|||++| .+|| ++.
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 260 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHH
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHH
Confidence 221 1122344578899999999999999999999999999999994 4443 344
Q ss_pred hhhhhcccchhhhccccCccCC
Q 041689 631 VFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 631 l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+.+++.+||+.||++|||++||
T Consensus 261 l~~li~~~l~~~p~~Rps~~el 282 (298)
T 3f66_A 261 LYEVMLKCWHPKAEMRPSFSEL 282 (298)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHH
Confidence 8899999999999999999864
No 178
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=352.05 Aligned_cols=223 Identities=22% Similarity=0.289 Sum_probs=192.1
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCC--ceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEE--FKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv 499 (652)
.++|.+.+.||+|+||.||+|++. +|+.||||+++... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 357899999999999999999876 58999999997543 234567789999999999999999999987654 77999
Q ss_pred EEccCCCChhhhhhcCCC--CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee----CCCCcEEEecccCCc
Q 041689 500 LEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL----DDTMVAHLSDFGITK 573 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll----~~~~~~kl~Dfg~~~ 573 (652)
|||+++|+|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 999999999999876442 389999999999999999999999 99999999999999 788889999999998
Q ss_pred cccCCCCccccccccCCccccCcccccc--------CccCcccchhhHHHHHHHHHhCCCCcch----------------
Q 041689 574 LLIGEDQSMTQTQTLATIGYIAPEYGRE--------GRVFANGDVYSFGIMLMEIHSAKQQCVS---------------- 629 (652)
Q Consensus 574 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwslG~vl~elltg~~p~~~---------------- 629 (652)
.... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 165 ~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 165 ELED---DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp ECCC---GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred EccC---CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 6532 222334569999999998765 5778899999999999999999999752
Q ss_pred ------------------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ------------------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ------------------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++||+++|+
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~ 300 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQF 300 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHH
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHH
Confidence 25688999999999999999763
No 179
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=6.1e-40 Score=337.91 Aligned_cols=221 Identities=24% Similarity=0.398 Sum_probs=190.7
Q ss_pred CCccceeccccceEEEEEEeC-----CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecC--CceEE
Q 041689 427 FNENNLIGKGGFGTIYKSRIG-----DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNE--EFKEL 498 (652)
Q Consensus 427 y~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 498 (652)
|++.+.||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488899999999999988642 58889999997653 34456789999999999999999999999874 57899
Q ss_pred EEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCC
Q 041689 499 VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE 578 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 578 (652)
||||+++|+|.+++.... +++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.....
T Consensus 113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 999999999999997754 89999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCc-cccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc-----------------------------
Q 041689 579 DQS-MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV----------------------------- 628 (652)
Q Consensus 579 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~----------------------------- 628 (652)
... .......+|..|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 221 12234457888999999999899999999999999999999988753
Q ss_pred ----------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ----------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ----------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++||
T Consensus 268 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 301 (318)
T 3lxp_A 268 ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENL 301 (318)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHH
Confidence 337889999999999999999874
No 180
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=3.7e-40 Score=333.66 Aligned_cols=220 Identities=25% Similarity=0.372 Sum_probs=191.8
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeec---------
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN--------- 492 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--------- 492 (652)
...+|++.+.||+|+||.||+|+.. +++.||+|+++... ..+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3456899999999999999999976 79999999997543 456789999999999999999998754
Q ss_pred -------CCceEEEEEccCCCChhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcE
Q 041689 493 -------EEFKELVLEHMPHGSLEKCLYSSN-CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVA 564 (652)
Q Consensus 493 -------~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~ 564 (652)
....++||||+++++|.+++.... ..+++..+..++.|++.||.|||++ +|+||||||+||++++++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence 345789999999999999997542 3689999999999999999999999 99999999999999999999
Q ss_pred EEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCc-----------------
Q 041689 565 HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQC----------------- 627 (652)
Q Consensus 565 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~----------------- 627 (652)
||+|||++...... .......+++.|+|||++.+..++.++||||||+++|||++|..|+
T Consensus 162 kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T 2a19_B 162 KIGDFGLVTSLKND---GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISD 238 (284)
T ss_dssp EECCCTTCEESSCC---SCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCT
T ss_pred EECcchhheecccc---ccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhcccccc
Confidence 99999999875322 1223456899999999999999999999999999999999998873
Q ss_pred --chhhhhhhcccchhhhccccCccCC
Q 041689 628 --VSFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 628 --~~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+..+.+++.+||+.||++|||++|+
T Consensus 239 ~~~~~~~~li~~~l~~dp~~Rps~~e~ 265 (284)
T 2a19_B 239 IFDKKEKTLLQKLLSKKPEDRPNTSEI 265 (284)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 3447889999999999999999874
No 181
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.9e-40 Score=358.11 Aligned_cols=224 Identities=25% Similarity=0.385 Sum_probs=189.8
Q ss_pred HhcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEc
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 502 (652)
..++|+..+.||+|+||.||+|.+.++..||||+++... ...+.+.+|++++++++||||+++++++.. +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 446788899999999999999999888889999997653 235678999999999999999999999876 678999999
Q ss_pred cCCCChhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCc
Q 041689 503 MPHGSLEKCLYSSN-CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 503 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 581 (652)
+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++...... .
T Consensus 260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~ 335 (452)
T 1fmk_A 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-Y 335 (452)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCc-e
Confidence 99999999997532 3589999999999999999999999 99999999999999999999999999998653221 1
Q ss_pred cccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch------------------------hhhhhhc
Q 041689 582 MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS------------------------FVFNLAM 636 (652)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~------------------------~l~~l~~ 636 (652)
.......+++.|+|||++.++.++.++|||||||++|||++ |+.||.. .+.+++.
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~ 415 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 415 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHH
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence 12233456789999999998999999999999999999999 8888642 3788999
Q ss_pred ccchhhhccccCccCC
Q 041689 637 ECTIESLELRINAKEI 652 (652)
Q Consensus 637 ~~l~~~p~~Rpt~~ei 652 (652)
+||+.||++|||+++|
T Consensus 416 ~cl~~dP~~Rpt~~~l 431 (452)
T 1fmk_A 416 QCWRKEPEERPTFEYL 431 (452)
T ss_dssp HHTCSSGGGSCCHHHH
T ss_pred HHccCChhhCcCHHHH
Confidence 9999999999999864
No 182
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=8.1e-40 Score=338.30 Aligned_cols=226 Identities=18% Similarity=0.242 Sum_probs=192.5
Q ss_pred HHHhcCCCcc-ceeccccceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCc
Q 041689 421 CRATYGFNEN-NLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC--GRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEF 495 (652)
Q Consensus 421 ~~~~~~y~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 495 (652)
....++|.+. +.||+|+||.||+|+.. +++.||+|+++... ......+.+|+.+++++ .||||+++++++...+.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 3445567777 88999999999999865 68999999997542 23456788999999999 56999999999999999
Q ss_pred eEEEEEccCCCChhhhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCC---CCcEEEecccC
Q 041689 496 KELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDD---TMVAHLSDFGI 571 (652)
Q Consensus 496 ~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~---~~~~kl~Dfg~ 571 (652)
.++||||+++|+|.+++... ...+++.++..++.|++.||+|||++ ||+||||||+||+++. ++.+||+|||+
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~ 180 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGM 180 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence 99999999999999988653 34689999999999999999999999 9999999999999987 78999999999
Q ss_pred CccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch----------------------
Q 041689 572 TKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS---------------------- 629 (652)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~---------------------- 629 (652)
++.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 181 a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 257 (327)
T 3lm5_A 181 SRKIGH---ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETF 257 (327)
T ss_dssp CEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTT
T ss_pred ccccCC---ccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhh
Confidence 986532 1223345699999999999999999999999999999999999999632
Q ss_pred -----hhhhhhcccchhhhccccCccCC
Q 041689 630 -----FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -----~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 258 ~~~~~~~~~li~~~L~~dP~~Rpt~~~l 285 (327)
T 3lm5_A 258 SSVSQLATDFIQSLLVKNPEKRPTAEIC 285 (327)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred cccCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 37889999999999999999864
No 183
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-40 Score=341.10 Aligned_cols=225 Identities=24% Similarity=0.411 Sum_probs=188.2
Q ss_pred cCCCccceeccccceEEEEEEeCC-----CcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIGD-----GMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKEL 498 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 498 (652)
.+|+..+.||+|+||.||+|+... +..||+|+++... ......+.+|++++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 467778999999999999997542 3459999997553 3345678899999999999999999999999999999
Q ss_pred EEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCC
Q 041689 499 VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE 578 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 578 (652)
||||+++|+|.+++......+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 9999999999999987766799999999999999999999999 9999999999999999999999999999875332
Q ss_pred CCc-cccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------hhhh
Q 041689 579 DQS-MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------SFVF 632 (652)
Q Consensus 579 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~~l~ 632 (652)
... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||. ..+.
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 280 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIY 280 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHH
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCHHHH
Confidence 211 11223346788999999998999999999999999999999 998863 3378
Q ss_pred hhhcccchhhhccccCccCC
Q 041689 633 NLAMECTIESLELRINAKEI 652 (652)
Q Consensus 633 ~l~~~~l~~~p~~Rpt~~ei 652 (652)
+++.+||+.||++||+++||
T Consensus 281 ~li~~~l~~~p~~Rps~~~l 300 (333)
T 1mqb_A 281 QLMMQCWQQERARRPKFADI 300 (333)
T ss_dssp HHHHHHTCSSTTTSCCHHHH
T ss_pred HHHHHHcCCChhhCcCHHHH
Confidence 99999999999999999764
No 184
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=338.84 Aligned_cols=227 Identities=20% Similarity=0.213 Sum_probs=191.8
Q ss_pred HhcCCCccceeccccceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeee----cCCceE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS----NEEFKE 497 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~~ 497 (652)
..++|++.+.||+|+||.||+|+. .+++.||||++........+.+.+|++++++++||||+++++++. .....+
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 346799999999999999999986 479999999997665566778999999999999999999999986 345789
Q ss_pred EEEEccCCCChhhhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcc
Q 041689 498 LVLEHMPHGSLEKCLYS---SNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL 574 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~ 574 (652)
+||||+++|+|.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 99999999999998875 344789999999999999999999999 999999999999999999999999999875
Q ss_pred ccCCCCcc-------ccccccCCccccCccccccCc---cCcccchhhHHHHHHHHHhCCCCcch---------------
Q 041689 575 LIGEDQSM-------TQTQTLATIGYIAPEYGREGR---VFANGDVYSFGIMLMEIHSAKQQCVS--------------- 629 (652)
Q Consensus 575 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~vl~elltg~~p~~~--------------- 629 (652)
........ ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 263 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ 263 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhcc
Confidence 42111000 012334799999999987543 68999999999999999999999643
Q ss_pred -----------hhhhhhcccchhhhccccCccCC
Q 041689 630 -----------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -----------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 264 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 297 (317)
T 2buj_A 264 LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLL 297 (317)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHH
Confidence 37889999999999999999864
No 185
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=7.2e-40 Score=369.04 Aligned_cols=221 Identities=21% Similarity=0.212 Sum_probs=195.7
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc---cchhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCceE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ---CGRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEFKE 497 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 497 (652)
...+|++.+.||+|+||.||+|+.. +++.||||+++.. .....+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4568999999999999999999865 5888999999754 223456678899999987 7999999999999999999
Q ss_pred EEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccC
Q 041689 498 LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 577 (652)
+||||+++|+|.+++.... .+++..+..|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999998754 699999999999999999999999 999999999999999999999999999986422
Q ss_pred CCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch-----------------------hhhhh
Q 041689 578 EDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS-----------------------FVFNL 634 (652)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~-----------------------~l~~l 634 (652)
........+||+.|+|||++.+..|+.++|||||||++|||++|+.||.. .+.++
T Consensus 495 --~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l 572 (674)
T 3pfq_A 495 --DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAI 572 (674)
T ss_dssp --TTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTTSCHHHHHH
T ss_pred --CCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHH
Confidence 22234456799999999999999999999999999999999999999643 37899
Q ss_pred hcccchhhhccccCc
Q 041689 635 AMECTIESLELRINA 649 (652)
Q Consensus 635 ~~~~l~~~p~~Rpt~ 649 (652)
+.+||+.||++||++
T Consensus 573 i~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 573 CKGLMTKHPGKRLGC 587 (674)
T ss_dssp HHHHSCSSSTTCTTC
T ss_pred HHHHccCCHHHCCCC
Confidence 999999999999997
No 186
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3e-40 Score=335.17 Aligned_cols=225 Identities=25% Similarity=0.390 Sum_probs=197.3
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 501 (652)
...+|++.+.||+|+||.||+|.+. ++..||+|+++.. ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 4567899999999999999999876 4889999999754 3345778999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 502 HMPHGSLEKCLYSSN-CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
|+++++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+...... .
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~-~ 165 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-T 165 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS-S
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCC-c
Confidence 999999999997643 3689999999999999999999999 9999999999999999999999999999865322 2
Q ss_pred ccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------hhhhhhh
Q 041689 581 SMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------SFVFNLA 635 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~~l~~l~ 635 (652)
........+++.|+|||++.+..++.++||||+|+++|+|++ |..||. ..+.+++
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 245 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM 245 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHH
Confidence 222334457888999999998999999999999999999999 888854 3378999
Q ss_pred cccchhhhccccCccCC
Q 041689 636 MECTIESLELRINAKEI 652 (652)
Q Consensus 636 ~~~l~~~p~~Rpt~~ei 652 (652)
.+||..||++|||++||
T Consensus 246 ~~~l~~dp~~Rps~~~~ 262 (288)
T 3kfa_A 246 RACWQWNPSDRPSFAEI 262 (288)
T ss_dssp HHHTCSSGGGSCCHHHH
T ss_pred HHHhCCChhhCcCHHHH
Confidence 99999999999999864
No 187
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.9e-40 Score=335.24 Aligned_cols=223 Identities=20% Similarity=0.220 Sum_probs=185.0
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
.++|.+.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999999875 68899999997542 22346788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|||+++++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 113 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 99999999999987654 689999999999999999999999 99999999999999999999999999997653221
Q ss_pred CccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch--------------------------hhhh
Q 041689 580 QSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS--------------------------FVFN 633 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~--------------------------~l~~ 633 (652)
........+++.|+|||++.+..++.++||||||+++|||++|+.||.. .+.+
T Consensus 189 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 267 (309)
T 2h34_A 189 -LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDA 267 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHH
T ss_pred -cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHH
Confidence 1222345689999999999999999999999999999999999999632 3778
Q ss_pred hhcccchhhhcccc-CccC
Q 041689 634 LAMECTIESLELRI-NAKE 651 (652)
Q Consensus 634 l~~~~l~~~p~~Rp-t~~e 651 (652)
++.+||+.||++|| +++|
T Consensus 268 li~~~l~~dP~~Rp~s~~~ 286 (309)
T 2h34_A 268 VIARGMAKNPEDRYVTCGD 286 (309)
T ss_dssp HHHHHTCSSGGGSCSSHHH
T ss_pred HHHHhccCCHHHHHHhHHH
Confidence 99999999999999 7765
No 188
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=8.9e-39 Score=359.68 Aligned_cols=335 Identities=17% Similarity=0.224 Sum_probs=286.2
Q ss_pred eeeceeEeccCCCcCCcc-----------------CCCCCC---CCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCC
Q 041689 4 ISIGKLELNVDDIESPCE-----------------IPSEIN---PHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDN 63 (652)
Q Consensus 4 ~~l~~l~l~~~~~~~~~~-----------------ip~~~~---~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 63 (652)
++|+.|+|+.|.+.. . +|..+. +++|++|+|++|++.+.+|..|.++++|++|+|++|
T Consensus 206 ~~L~~L~Ls~n~l~~--~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n 283 (636)
T 4eco_A 206 TKLRQFYMGNSPFVA--ENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACN 283 (636)
T ss_dssp TTCCEEEEESCCCCG--GGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTC
T ss_pred cCCCEEECcCCcccc--ccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCC
Confidence 468999999999873 2 898874 899999999999999999999999999999999999
Q ss_pred c-Cee--cc------------CCCccccccCCCCCccccc--ccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEE
Q 041689 64 Y-LSG--SL------------SSIADNYLTSSTPELSFLS--SLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFD 126 (652)
Q Consensus 64 ~-l~~--~~------------~~~~~~~l~~~~~~~~~~~--~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~ 126 (652)
+ +++ ++ +.+....+..+... ..+. .+.++++|++|+|++|++++..| .+..+++ |++|+
T Consensus 284 ~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip--~~~~l~~-L~~L~ 359 (636)
T 4eco_A 284 RGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP--AFGSEIK-LASLN 359 (636)
T ss_dssp TTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC--CCEEEEE-ESEEE
T ss_pred CCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh--hhCCCCC-CCEEE
Confidence 8 886 33 33444444444443 3344 68899999999999999996666 5778876 99999
Q ss_pred ccCCcccccCCccccCCCC-CCEEEecCccccccCCccccCCC--CCcEEecccCccccccCcccc-------CCCCCcE
Q 041689 127 MSKCNVSGGIPEEIGNLTN-LTAIYLGGNKLNGSIPFTLRELQ--KLQYVGLKDNKLEGTIPYDIF-------RLVKLYK 196 (652)
Q Consensus 127 L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~ 196 (652)
|++|+++ .+|..+..+++ |++|+|++|+++ .+|..+..++ +|++|++++|++++.+|..+. .+++|++
T Consensus 360 L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~ 437 (636)
T 4eco_A 360 LAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSS 437 (636)
T ss_dssp CCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEE
T ss_pred CCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCE
Confidence 9999999 77888999999 999999999999 6777777755 899999999999999998888 7889999
Q ss_pred EEccCCcccccccccCCCCCCCCEEEccCCC-CCCCcccCC--------CCccceEecccccCCccCccccc--CCCCCc
Q 041689 197 LDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEIGN--------LKVLIGIDFSMNNFSSVIPTTIG--SLKDLQ 265 (652)
Q Consensus 197 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~~~~~--------l~~L~~L~ls~N~l~~~~~~~~~--~l~~L~ 265 (652)
|+|++|+++.+++..+..+++|++|+|++|. ..+|..+.. +++|+.|+|++|+++. +|..+. .+++|+
T Consensus 438 L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~l~~L~ 516 (636)
T 4eco_A 438 INLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLV 516 (636)
T ss_dssp EECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCCB-CCGGGSTTTCTTCC
T ss_pred EECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCCc-cChhhhhccCCCcC
Confidence 9999999997777778889999999999997 556665433 3399999999999994 677776 999999
Q ss_pred EEEccCCcCCCcccccccccccCcceec------cccccCCCCchhhcCCCCCceEEeecCcCcccCCCCCCCCCccccc
Q 041689 266 YLFLGYNILKGSIPDSVGDLISLKSLNF------SNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKGGSFGNFSAES 339 (652)
Q Consensus 266 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L------~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~~~ 339 (652)
.|+|++|+|++ +|..+..+++|+.|+| ++|++.+.+|..+..+++|+.|+|++|+++ .+|.. ..+.++.++
T Consensus 517 ~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~-~~~~L~~L~ 593 (636)
T 4eco_A 517 GIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEK-ITPNISVLD 593 (636)
T ss_dssp EEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSC-CCTTCCEEE
T ss_pred EEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCC-ccCHh-HhCcCCEEE
Confidence 99999999997 8999999999999999 568888999999999999999999999994 56654 337999999
Q ss_pred ccCCccCCCCC
Q 041689 340 FEGNKLLCGSP 350 (652)
Q Consensus 340 ~~~N~~~c~~~ 350 (652)
+++|++.|-..
T Consensus 594 Ls~N~l~~~~~ 604 (636)
T 4eco_A 594 IKDNPNISIDL 604 (636)
T ss_dssp CCSCTTCEEEC
T ss_pred CcCCCCccccH
Confidence 99999988553
No 189
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-40 Score=335.15 Aligned_cols=224 Identities=21% Similarity=0.359 Sum_probs=190.2
Q ss_pred CCCccceeccccceEEEEEEeC-C---CcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCce-EEE
Q 041689 426 GFNENNLIGKGGFGTIYKSRIG-D---GMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFK-ELV 499 (652)
Q Consensus 426 ~y~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~lv 499 (652)
.|...+.||+|+||.||+|++. + +..||+|++.... ....+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4566789999999999999853 2 3369999987543 34457788999999999999999999999776555 999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|||+.+|+|.+++......+++.++..++.|++.||+|||++ ||+||||||+||++++++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 999999999999988666789999999999999999999999 99999999999999999999999999998653221
Q ss_pred --CccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCC-------------------------cchhhh
Q 041689 580 --QSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQ-------------------------CVSFVF 632 (652)
Q Consensus 580 --~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p-------------------------~~~~l~ 632 (652)
.........+++.|+|||.+.+..++.++|||||||++|||++|..| ++..+.
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLY 258 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHH
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHH
Confidence 11122344578899999999999999999999999999999996555 234488
Q ss_pred hhhcccchhhhccccCccCC
Q 041689 633 NLAMECTIESLELRINAKEI 652 (652)
Q Consensus 633 ~l~~~~l~~~p~~Rpt~~ei 652 (652)
+++.+||+.||++|||++||
T Consensus 259 ~li~~~l~~~p~~Rps~~~l 278 (298)
T 3pls_A 259 QVMQQCWEADPAVRPTFRVL 278 (298)
T ss_dssp HHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHccCChhhCcCHHHH
Confidence 99999999999999999764
No 190
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=6.1e-40 Score=358.48 Aligned_cols=220 Identities=23% Similarity=0.313 Sum_probs=188.5
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 501 (652)
++|++.+.||+|+||.||+|+.. ++..||+|+++... ......+.+|++++++++||||+++++++.+.+..|+|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 45899999999999999999975 68899999997542 2345678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCC---CCcEEEecccCCccccCC
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDD---TMVAHLSDFGITKLLIGE 578 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~---~~~~kl~Dfg~~~~~~~~ 578 (652)
|+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++. ++.+||+|||+++.....
T Consensus 117 ~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 117 CYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 999999999887654 689999999999999999999999 9999999999999975 455999999999876322
Q ss_pred CCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch---------------------------hh
Q 041689 579 DQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS---------------------------FV 631 (652)
Q Consensus 579 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~---------------------------~l 631 (652)
.......||+.|+|||++. +.++.++||||+||++|+|++|+.||.. .+
T Consensus 193 ---~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 268 (494)
T 3lij_A 193 ---KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGA 268 (494)
T ss_dssp ---BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHH
T ss_pred ---ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHH
Confidence 2234467999999999876 5799999999999999999999999632 36
Q ss_pred hhhhcccchhhhccccCccCC
Q 041689 632 FNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 632 ~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+++.+||+.||++|||++|+
T Consensus 269 ~~li~~~L~~dp~~R~s~~e~ 289 (494)
T 3lij_A 269 KDLIKQMLQFDSQRRISAQQA 289 (494)
T ss_dssp HHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHHHHHCCCChhhCccHHHH
Confidence 789999999999999999864
No 191
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-40 Score=346.07 Aligned_cols=223 Identities=22% Similarity=0.312 Sum_probs=190.4
Q ss_pred hcCCCccceeccccceEEEEEEe----CCCcEEEEEEeeccc----chhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCC
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI----GDGMEVAVKVFHLQC----GRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEE 494 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 494 (652)
.++|.+.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35789999999999999999986 368999999986432 23446677899999999 6999999999999999
Q ss_pred ceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcc
Q 041689 495 FKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL 574 (652)
Q Consensus 495 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~ 574 (652)
..++||||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 9999999999999999987654 689999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCccccccccCCccccCcccccc--CccCcccchhhHHHHHHHHHhCCCCcch-----------------------
Q 041689 575 LIGEDQSMTQTQTLATIGYIAPEYGRE--GRVFANGDVYSFGIMLMEIHSAKQQCVS----------------------- 629 (652)
Q Consensus 575 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~p~~~----------------------- 629 (652)
+... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 209 ~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (355)
T 1vzo_A 209 FVAD-ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ 287 (355)
T ss_dssp CCGG-GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCT
T ss_pred cccC-CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCCc
Confidence 5321 1222334569999999999875 3478999999999999999999999742
Q ss_pred ----hhhhhhcccchhhhcccc-----CccC
Q 041689 630 ----FVFNLAMECTIESLELRI-----NAKE 651 (652)
Q Consensus 630 ----~l~~l~~~~l~~~p~~Rp-----t~~e 651 (652)
.+.+++.+||..||++|| +++|
T Consensus 288 ~~~~~~~~li~~~L~~dP~~R~~~~~~s~~e 318 (355)
T 1vzo_A 288 EMSALAKDLIQRLLMKDPKKRLGCGPRDADE 318 (355)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHH
T ss_pred ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHH
Confidence 267899999999999999 6654
No 192
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.7e-40 Score=346.10 Aligned_cols=221 Identities=22% Similarity=0.303 Sum_probs=184.3
Q ss_pred HHHhcCCCccceeccccceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeec-------
Q 041689 421 CRATYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN------- 492 (652)
Q Consensus 421 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------- 492 (652)
.....+|++.+.||+|+||.||+|+. .+|+.||||++.... ....+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 44567899999999999999999986 479999999986542 223479999999999999999999843
Q ss_pred -------------------------------CCceEEEEEccCCCChhhhhhc---CCCCCCHHHHHHHHHHHHHHHHHH
Q 041689 493 -------------------------------EEFKELVLEHMPHGSLEKCLYS---SNCILDIFQRLNIMIDVASVLEYL 538 (652)
Q Consensus 493 -------------------------------~~~~~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~L 538 (652)
..+.++||||+++ +|.+.+.. ....+++..+..++.|++.||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3348899999985 87776653 334799999999999999999999
Q ss_pred HcCCCCCeEecCCCCCCeeeC-CCCcEEEecccCCccccCCCCccccccccCCccccCccccccC-ccCcccchhhHHHH
Q 041689 539 HFNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG-RVFANGDVYSFGIM 616 (652)
Q Consensus 539 H~~~~~~iiH~dlkp~NIll~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~v 616 (652)
|++ ||+||||||+||+++ .++.+||+|||+++..... .......+|+.|+|||++.+. .++.++||||+||+
T Consensus 158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS---EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT---SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC---CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 999 999999999999998 6889999999999865322 223345689999999988765 48999999999999
Q ss_pred HHHHHhCCCCcch----------------------------------------------------hhhhhhcccchhhhc
Q 041689 617 LMEIHSAKQQCVS----------------------------------------------------FVFNLAMECTIESLE 644 (652)
Q Consensus 617 l~elltg~~p~~~----------------------------------------------------~l~~l~~~~l~~~p~ 644 (652)
+|||++|+.||.. .+.+++.+||+.||+
T Consensus 232 l~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 9999999999753 267899999999999
Q ss_pred cccCccCC
Q 041689 645 LRINAKEI 652 (652)
Q Consensus 645 ~Rpt~~ei 652 (652)
+|||++|+
T Consensus 312 ~R~t~~e~ 319 (383)
T 3eb0_A 312 LRINPYEA 319 (383)
T ss_dssp GSCCHHHH
T ss_pred hCCCHHHH
Confidence 99999864
No 193
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=9.7e-40 Score=349.90 Aligned_cols=195 Identities=23% Similarity=0.291 Sum_probs=170.3
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhc------CCCeeeeEEeeeecCCce
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSI------HYRNLVKIISSCSNEEFK 496 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~ 496 (652)
.++|++.+.||+|+||.||+|... +++.||||+++.. ......+.+|+++++.+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457999999999999999999865 5899999999754 23446778899988887 577999999999999999
Q ss_pred EEEEEccCCCChhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCc--EEEecccCCc
Q 041689 497 ELVLEHMPHGSLEKCLYSSN-CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMV--AHLSDFGITK 573 (652)
Q Consensus 497 ~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~--~kl~Dfg~~~ 573 (652)
++||||+. ++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 59999887654 3589999999999999999999999 9999999999999999887 9999999997
Q ss_pred cccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc
Q 041689 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV 628 (652)
Q Consensus 574 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~ 628 (652)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 251 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~ 300 (429)
T 3kvw_A 251 YEH-----QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP 300 (429)
T ss_dssp ETT-----CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred ecC-----CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCC
Confidence 542 12234578999999999999999999999999999999999999863
No 194
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.2e-39 Score=357.05 Aligned_cols=221 Identities=23% Similarity=0.317 Sum_probs=191.4
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccc-------------hhhhhHHHHHHHHHhcCCCeeeeEEee
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCG-------------RAFKSFDIECEIMKSIHYRNLVKIISS 489 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~~~ 489 (652)
.++|.+.+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|++++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 567999999999999999999875 588999999975421 235678899999999999999999999
Q ss_pred eecCCceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCC---cEEE
Q 041689 490 CSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM---VAHL 566 (652)
Q Consensus 490 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~---~~kl 566 (652)
+.+.+..++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++ .+||
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 190 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKI 190 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEE
Confidence 999999999999999999999887654 699999999999999999999999 999999999999998765 6999
Q ss_pred ecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc------------------
Q 041689 567 SDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV------------------ 628 (652)
Q Consensus 567 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~------------------ 628 (652)
+|||+++.... ........||+.|+|||++. +.++.++||||+||++|+|++|+.||.
T Consensus 191 ~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~ 266 (504)
T 3q5i_A 191 VDFGLSSFFSK---DYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYF 266 (504)
T ss_dssp CCCTTCEECCT---TSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred EECCCCEEcCC---CCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 99999987632 22334567999999999976 569999999999999999999999963
Q ss_pred ---------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ---------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ---------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||..||++|||++|+
T Consensus 267 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~ 299 (504)
T 3q5i_A 267 DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEA 299 (504)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CccccCCCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 337889999999999999999864
No 195
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3.5e-40 Score=359.86 Aligned_cols=220 Identities=25% Similarity=0.332 Sum_probs=194.2
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
++|++.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46899999999999999999876 78999999996542 334677899999999999999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee---CCCCcEEEecccCCccccC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~ 577 (652)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||+++.+..
T Consensus 106 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 106 EVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 9999999999887654 689999999999999999999999 99999999999999 5678999999999987632
Q ss_pred CCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch---------------------------h
Q 041689 578 EDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS---------------------------F 630 (652)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~---------------------------~ 630 (652)
. .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.. .
T Consensus 182 ~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 257 (484)
T 3nyv_A 182 S---KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 257 (484)
T ss_dssp C---CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHH
T ss_pred c---cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHH
Confidence 2 22344569999999999865 799999999999999999999999632 3
Q ss_pred hhhhhcccchhhhccccCccCC
Q 041689 631 VFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 631 l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+.+++.+||+.||++|||++|+
T Consensus 258 ~~~li~~~L~~dp~~R~s~~e~ 279 (484)
T 3nyv_A 258 AKDLIRKMLTYVPSMRISARDA 279 (484)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHHCCCChhHCcCHHHH
Confidence 7889999999999999999764
No 196
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.8e-40 Score=335.16 Aligned_cols=224 Identities=22% Similarity=0.277 Sum_probs=191.5
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeee--cCCceEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCS--NEEFKEL 498 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~l 498 (652)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++. ..+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467999999999999999999875 68999999997542 334567899999999999999999999874 4678899
Q ss_pred EEEccCCCChhhhhhcCC---CCCCHHHHHHHHHHHHHHHHHHHcCCCCC-----eEecCCCCCCeeeCCCCcEEEeccc
Q 041689 499 VLEHMPHGSLEKCLYSSN---CILDIFQRLNIMIDVASVLEYLHFNFLVP-----VIHCDLKPSNVLLDDTMVAHLSDFG 570 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----iiH~dlkp~NIll~~~~~~kl~Dfg 570 (652)
||||+++++|.+++.... ..+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999987532 2589999999999999999999998 7 9999999999999999999999999
Q ss_pred CCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc----------------------
Q 041689 571 ITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV---------------------- 628 (652)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~---------------------- 628 (652)
.++..... ........|++.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 162 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~ 239 (279)
T 2w5a_A 162 LARILNHD--TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYR 239 (279)
T ss_dssp HHHHC-----CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTT
T ss_pred hheeeccc--cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcc
Confidence 99865221 112234468999999999998899999999999999999999999853
Q ss_pred --hhhhhhhcccchhhhccccCccCC
Q 041689 629 --SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 --~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++||
T Consensus 240 ~~~~l~~li~~~l~~~p~~Rps~~~l 265 (279)
T 2w5a_A 240 YSDELNEIITRMLNLKDYHRPSVEEI 265 (279)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cCHHHHHHHHHHcCCCcccCCCHHHH
Confidence 347899999999999999999874
No 197
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=9.5e-40 Score=335.24 Aligned_cols=224 Identities=23% Similarity=0.358 Sum_probs=184.8
Q ss_pred hcCCCccceeccccceEEEEEEe-CCCcEEEEEEeecc---cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQ---CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
..+|++.+.||+|+||.||+|.. .+|+.||+|+++.. .......+.+|++++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35689999999999999999986 47899999999753 234556788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcccc
Q 041689 500 LEHMPHGSLEKCLYS---SNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 576 (652)
|||+++++|.+++.. ....+++..+..++.|++.||.|||++ |++||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999998864 334689999999999999999999999 99999999999999999999999999998653
Q ss_pred CCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc---------------------------h
Q 041689 577 GEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV---------------------------S 629 (652)
Q Consensus 577 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~---------------------------~ 629 (652)
.. ........+++.|+|||++.+..++.++||||||+++|||++|+.||. .
T Consensus 188 ~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (310)
T 2wqm_A 188 SK--TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSE 265 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCH
T ss_pred CC--CccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCH
Confidence 21 122234468999999999999999999999999999999999999863 2
Q ss_pred hhhhhhcccchhhhccccCccCC
Q 041689 630 FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 266 ~l~~li~~~l~~dp~~Rps~~~i 288 (310)
T 2wqm_A 266 ELRQLVNMCINPDPEKRPDVTYV 288 (310)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHHHcCCChhhCCCHHHH
Confidence 37899999999999999999864
No 198
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.5e-40 Score=341.15 Aligned_cols=226 Identities=25% Similarity=0.356 Sum_probs=190.0
Q ss_pred hcCCCccceeccccceEEEEEEe------CCCcEEEEEEeecc-cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCce
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI------GDGMEVAVKVFHLQ-CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFK 496 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 496 (652)
..+|.+.+.||+|+||.||+|++ .++..||||++... .......+.+|+.++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 45789999999999999999983 24778999999644 334556788999999999999999999999999999
Q ss_pred EEEEEccCCCChhhhhhcCC------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCC---CCcEEEe
Q 041689 497 ELVLEHMPHGSLEKCLYSSN------CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDD---TMVAHLS 567 (652)
Q Consensus 497 ~lv~e~~~~g~L~~~l~~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~---~~~~kl~ 567 (652)
++||||+++++|.+++.... ..+++.++..++.|++.||.|||++ ||+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999998654 3588999999999999999999999 9999999999999984 4569999
Q ss_pred cccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch-----------------
Q 041689 568 DFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS----------------- 629 (652)
Q Consensus 568 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~----------------- 629 (652)
|||++................+++.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~ 265 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 265 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCC
Confidence 9999976543332233334567899999999988999999999999999999998 8888642
Q ss_pred -------hhhhhhcccchhhhccccCccCC
Q 041689 630 -------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 266 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 295 (327)
T 2yfx_A 266 PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 295 (327)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 36789999999999999999864
No 199
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.3e-39 Score=331.92 Aligned_cols=223 Identities=21% Similarity=0.267 Sum_probs=191.7
Q ss_pred hcCCCccceeccccceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeee-ecCCceEEEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSC-SNEEFKELVLE 501 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e 501 (652)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+|++++++++|++++..++++ ..++..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46899999999999999999986 579999999987543 235688999999999988866655554 66678899999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee---CCCCcEEEecccCCccccCC
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFGITKLLIGE 578 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~ 578 (652)
|+ +++|.+++......+++.++..++.|++.||+|||++ +|+||||||+||++ ++++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 8899999986666799999999999999999999999 99999999999999 48889999999999876433
Q ss_pred CCcc-----ccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch------------------------
Q 041689 579 DQSM-----TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS------------------------ 629 (652)
Q Consensus 579 ~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~------------------------ 629 (652)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 241 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHH
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHH
Confidence 2211 12345699999999999999999999999999999999999999743
Q ss_pred -------hhhhhhcccchhhhccccCccCC
Q 041689 630 -------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 242 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 271 (296)
T 3uzp_A 242 LCKGYPSEFATYLNFCRSLRFDDKPDYSYL 271 (296)
T ss_dssp HTTTSCHHHHHHHHHHHTSCTTCCCCHHHH
T ss_pred HHhhCCHHHHHHHHHHHhcCcCcCCCHHHH
Confidence 36889999999999999999864
No 200
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.9e-39 Score=330.95 Aligned_cols=223 Identities=23% Similarity=0.289 Sum_probs=194.2
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---------chhhhhHHHHHHHHHhcC-CCeeeeEEeeee
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---------GRAFKSFDIECEIMKSIH-YRNLVKIISSCS 491 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~ 491 (652)
..++|.+.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3468999999999999999999875 68999999997542 123456789999999995 999999999999
Q ss_pred cCCceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccC
Q 041689 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGI 571 (652)
Q Consensus 492 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~ 571 (652)
..+..++||||+++++|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccc
Confidence 9999999999999999999987654 689999999999999999999999 999999999999999999999999999
Q ss_pred CccccCCCCccccccccCCccccCccccc------cCccCcccchhhHHHHHHHHHhCCCCcc-----------------
Q 041689 572 TKLLIGEDQSMTQTQTLATIGYIAPEYGR------EGRVFANGDVYSFGIMLMEIHSAKQQCV----------------- 628 (652)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwslG~vl~elltg~~p~~----------------- 628 (652)
+...... .......+++.|+|||++. ...++.++||||||+++|||++|+.||.
T Consensus 171 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 247 (298)
T 1phk_A 171 SCQLDPG---EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 247 (298)
T ss_dssp CEECCTT---CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred hhhcCCC---cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcc
Confidence 9865322 2233456899999999875 4568899999999999999999999852
Q ss_pred ----------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ----------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ----------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++|+
T Consensus 248 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 281 (298)
T 1phk_A 248 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 281 (298)
T ss_dssp CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred cCcccccccCHHHHHHHHHHccCCcccCCCHHHH
Confidence 337889999999999999999764
No 201
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-40 Score=341.32 Aligned_cols=234 Identities=22% Similarity=0.298 Sum_probs=191.6
Q ss_pred ccccHHHHHHHhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhc-CCCeeeeEEeee
Q 041689 413 RRFSYLEVCRATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSI-HYRNLVKIISSC 490 (652)
Q Consensus 413 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 490 (652)
..++..++....++|++.+.||+|+||.||+|++. +++.||+|++.... .....+.+|+.+++++ +||||+++++++
T Consensus 12 ~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 90 (326)
T 2x7f_A 12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAF 90 (326)
T ss_dssp ----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred hhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence 34444555566788999999999999999999874 68999999997543 3456788999999999 899999999998
Q ss_pred ec------CCceEEEEEccCCCChhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCc
Q 041689 491 SN------EEFKELVLEHMPHGSLEKCLYSSN-CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMV 563 (652)
Q Consensus 491 ~~------~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~ 563 (652)
.. .+..++||||+++++|.+++.... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.
T Consensus 91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~ 167 (326)
T 2x7f_A 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAE 167 (326)
T ss_dssp EECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCC
T ss_pred eeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCC
Confidence 76 467899999999999999987643 3689999999999999999999999 9999999999999999999
Q ss_pred EEEecccCCccccCCCCccccccccCCccccCccccc-----cCccCcccchhhHHHHHHHHHhCCCCcc----------
Q 041689 564 AHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR-----EGRVFANGDVYSFGIMLMEIHSAKQQCV---------- 628 (652)
Q Consensus 564 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~---------- 628 (652)
+||+|||++...... ........|++.|+|||++. +..++.++|||||||++|||++|+.||.
T Consensus 168 ~kl~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 245 (326)
T 2x7f_A 168 VKLVDFGVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL 245 (326)
T ss_dssp EEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred EEEeeCcCceecCcC--ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence 999999999865321 12223456899999999986 5678899999999999999999999863
Q ss_pred ---------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ---------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ---------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||..||++|||++||
T Consensus 246 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 284 (326)
T 2x7f_A 246 IPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQL 284 (326)
T ss_dssp HHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred hhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHH
Confidence 347899999999999999999864
No 202
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=5.6e-40 Score=337.48 Aligned_cols=230 Identities=23% Similarity=0.355 Sum_probs=183.8
Q ss_pred HHHHhcCCCccceeccccceEEEEEEeC----CCcEEEEEEeecc--cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecC
Q 041689 420 VCRATYGFNENNLIGKGGFGTIYKSRIG----DGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNE 493 (652)
Q Consensus 420 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 493 (652)
+....++|.+.+.||+|+||.||+|+.. ++..||+|+++.. .....+.+.+|++++++++||||+++++++...
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 3345567889999999999999999753 3558999998754 233456788999999999999999999998765
Q ss_pred C-----ceEEEEEccCCCChhhhhhc-----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCc
Q 041689 494 E-----FKELVLEHMPHGSLEKCLYS-----SNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMV 563 (652)
Q Consensus 494 ~-----~~~lv~e~~~~g~L~~~l~~-----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~ 563 (652)
+ ..++||||+++++|.+++.. ....+++.++..++.|++.||.|||++ +|+||||||+||+++.++.
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSC
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCc
Confidence 4 35999999999999998843 223689999999999999999999999 9999999999999999999
Q ss_pred EEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc--------------
Q 041689 564 AHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV-------------- 628 (652)
Q Consensus 564 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~-------------- 628 (652)
+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |+.||.
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 265 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG 265 (313)
T ss_dssp EEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT
T ss_pred EEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcC
Confidence 99999999986643322223334457889999999999999999999999999999999 887753
Q ss_pred ----------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ----------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ----------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++||
T Consensus 266 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 299 (313)
T 3brb_A 266 HRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVL 299 (313)
T ss_dssp CCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred CCCCCCccccHHHHHHHHHHcCCChhhCcCHHHH
Confidence 347899999999999999999864
No 203
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-40 Score=347.78 Aligned_cols=225 Identities=23% Similarity=0.379 Sum_probs=181.7
Q ss_pred cCCCccceeccccceEEEEEEeC--C--CcEEEEEEeecc-cchhhhhHHHHHHHHHhcCCCeeeeEEeeee-cCCceEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG--D--GMEVAVKVFHLQ-CGRAFKSFDIECEIMKSIHYRNLVKIISSCS-NEEFKEL 498 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~l 498 (652)
..|...+.||+|+||.||+|+.. + +..||+|.++.. .....+.+.+|+.++++++||||+++++++. .++..++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 34667789999999999999853 2 245899998654 3345678899999999999999999999865 4567899
Q ss_pred EEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCC
Q 041689 499 VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGE 578 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 578 (652)
||||+++|+|.+++......+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.....
T Consensus 169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999999999987766789999999999999999999999 9999999999999999999999999999865332
Q ss_pred CCc--cccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------hhh
Q 041689 579 DQS--MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------SFV 631 (652)
Q Consensus 579 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~~l 631 (652)
... .......+|+.|+|||++.+..++.++|||||||++|||++ |.+||. ..+
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l 325 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 325 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHH
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHH
Confidence 211 11233457889999999999999999999999999999999 566643 347
Q ss_pred hhhhcccchhhhccccCccCC
Q 041689 632 FNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 632 ~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+++.+||+.||++|||++||
T Consensus 326 ~~li~~cl~~dp~~RPs~~el 346 (373)
T 3c1x_A 326 YEVMLKCWHPKAEMRPSFSEL 346 (373)
T ss_dssp HHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHH
Confidence 899999999999999999874
No 204
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5.6e-40 Score=339.61 Aligned_cols=222 Identities=28% Similarity=0.446 Sum_probs=188.5
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcE--EEEEEeecc-cchhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCceEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGME--VAVKVFHLQ-CGRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 499 (652)
++|.+.+.||+|+||.||+|+.. ++.. ||+|.++.. .....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 56888999999999999999864 5664 499998753 233456789999999999 899999999999999999999
Q ss_pred EEccCCCChhhhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcE
Q 041689 500 LEHMPHGSLEKCLYSSN---------------CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVA 564 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~ 564 (652)
|||+++++|.+++.... ..+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999987653 3689999999999999999999999 99999999999999999999
Q ss_pred EEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc---------------
Q 041689 565 HLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV--------------- 628 (652)
Q Consensus 565 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~--------------- 628 (652)
||+|||+++... .........+++.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 182 kL~Dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~ 258 (327)
T 1fvr_A 182 KIADFGLSRGQE---VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 258 (327)
T ss_dssp EECCTTCEESSC---EECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTC
T ss_pred EEcccCcCcccc---ccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCC
Confidence 999999987431 1112233456889999999988889999999999999999998 998863
Q ss_pred ---------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ---------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ---------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++|+
T Consensus 259 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 291 (327)
T 1fvr_A 259 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 291 (327)
T ss_dssp CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 347889999999999999999764
No 205
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=341.29 Aligned_cols=223 Identities=27% Similarity=0.386 Sum_probs=181.0
Q ss_pred hcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHH--HHhcCCCeeeeEEeeee-----cCCce
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEI--MKSIHYRNLVKIISSCS-----NEEFK 496 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~-----~~~~~ 496 (652)
.++|.+.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ ++.++||||+++++++. .....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46789999999999999999987 68999999997542 2334444444 45589999999997543 23367
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCC------CCCeEecCCCCCCeeeCCCCcEEEeccc
Q 041689 497 ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF------LVPVIHCDLKPSNVLLDDTMVAHLSDFG 570 (652)
Q Consensus 497 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~iiH~dlkp~NIll~~~~~~kl~Dfg 570 (652)
++||||+++|+|.+++.... .++..+..++.|++.||+|||+.. .++|+||||||+||+++.++.+||+|||
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 89999999999999997765 588899999999999999999763 2389999999999999999999999999
Q ss_pred CCccccCCCC------ccccccccCCccccCcccccc-------CccCcccchhhHHHHHHHHHhCCCCcc---------
Q 041689 571 ITKLLIGEDQ------SMTQTQTLATIGYIAPEYGRE-------GRVFANGDVYSFGIMLMEIHSAKQQCV--------- 628 (652)
Q Consensus 571 ~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~vl~elltg~~p~~--------- 628 (652)
+++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|..|+.
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 9987643211 112234569999999999876 467788999999999999999966531
Q ss_pred ----------------------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ----------------------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ----------------------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~ 309 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXA 309 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHH
Confidence 147899999999999999999874
No 206
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=9.1e-40 Score=333.54 Aligned_cols=222 Identities=25% Similarity=0.316 Sum_probs=189.9
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 501 (652)
++|++.+.||+|+||.||+|+.. +|+.||+|+++... ......+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57899999999999999999875 68999999986542 2234678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 502 HMPHGSLEKCLYSSN-CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
|++ ++|.+++.... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-- 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-- 156 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC--
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC--
Confidence 998 59999887654 3688999999999999999999999 9999999999999999999999999999865321
Q ss_pred ccccccccCCccccCccccccCc-cCcccchhhHHHHHHHHHhCCCCcch------------------------------
Q 041689 581 SMTQTQTLATIGYIAPEYGREGR-VFANGDVYSFGIMLMEIHSAKQQCVS------------------------------ 629 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~vl~elltg~~p~~~------------------------------ 629 (652)
........+|+.|+|||++.+.. ++.++|||||||++|||++|+.||..
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 157 VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcc
Confidence 12233456899999999987765 78999999999999999999998642
Q ss_pred ----------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ----------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ----------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~ 281 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 281 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHH
Confidence 35679999999999999999864
No 207
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.2e-39 Score=342.12 Aligned_cols=223 Identities=23% Similarity=0.246 Sum_probs=190.6
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecC-----Cce
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNE-----EFK 496 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~ 496 (652)
..+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 457999999999999999999865 68899999997542 33456788999999999999999999998654 468
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcccc
Q 041689 497 ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576 (652)
Q Consensus 497 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 576 (652)
++||||+++ +|.+++... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 106 ~iv~e~~~~-~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLMET-DLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCSE-EHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccCc-CHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 999999975 999988765 489999999999999999999999 99999999999999999999999999998653
Q ss_pred CCCCc-cccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCCcc--------------------------
Q 041689 577 GEDQS-MTQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQCV-------------------------- 628 (652)
Q Consensus 577 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~-------------------------- 628 (652)
..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 259 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTC
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence 22111 11234579999999998654 458999999999999999999999973
Q ss_pred ----------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ----------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ----------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++|+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 311 (364)
T 3qyz_A 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311 (364)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred hhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 346789999999999999999864
No 208
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.7e-38 Score=350.47 Aligned_cols=158 Identities=24% Similarity=0.270 Sum_probs=129.0
Q ss_pred cCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CC---CCcccCCCCccceEecccccCCc-cCcccccCCCC
Q 041689 189 FRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GP---LPLEIGNLKVLIGIDFSMNNFSS-VIPTTIGSLKD 263 (652)
Q Consensus 189 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~---~~~~~~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~ 263 (652)
..+++|++|++++|++++..|..|..+++|++|+|++|. .. +|..++++++|+.|++++|++++ +.+..+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 567788888999998888888888888899999999886 32 24568888889999999999887 44456888889
Q ss_pred CcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCC-CCCCCCcccccccC
Q 041689 264 LQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPK-GGSFGNFSAESFEG 342 (652)
Q Consensus 264 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~~~l~~~~~~~ 342 (652)
|++|+|++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++.++. ...++.++.+++++
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCS
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecC
Confidence 99999999988877666554 68999999999998 5666666899999999999999966655 67788889999999
Q ss_pred CccCCCC
Q 041689 343 NKLLCGS 349 (652)
Q Consensus 343 N~~~c~~ 349 (652)
|+|.|..
T Consensus 507 N~~~c~c 513 (562)
T 3a79_B 507 NPWDCTC 513 (562)
T ss_dssp CCBCCCH
T ss_pred CCcCCCc
Confidence 9998854
No 209
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.9e-40 Score=334.96 Aligned_cols=226 Identities=25% Similarity=0.337 Sum_probs=190.6
Q ss_pred HHhcCCCccc-eeccccceEEEEEEe---CCCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCc
Q 041689 422 RATYGFNENN-LIGKGGFGTIYKSRI---GDGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEF 495 (652)
Q Consensus 422 ~~~~~y~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 495 (652)
....+|.+.+ .||+|+||.||+|.+ .+++.||||+++... ....+.+.+|++++++++||||+++++++ ..+.
T Consensus 13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91 (291)
T ss_dssp CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence 3446677777 999999999999953 247889999997542 23456789999999999999999999999 5567
Q ss_pred eEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccc
Q 041689 496 KELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL 575 (652)
Q Consensus 496 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 575 (652)
.++||||+++++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp EEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred cEEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 899999999999999998754 689999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCcc-ccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------h
Q 041689 576 IGEDQSM-TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------S 629 (652)
Q Consensus 576 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~ 629 (652)
....... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||. .
T Consensus 168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (291)
T 1xbb_A 168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR 247 (291)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCH
T ss_pred ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCH
Confidence 4332211 1223346788999999988889999999999999999999 999864 3
Q ss_pred hhhhhhcccchhhhccccCccCC
Q 041689 630 FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++||+++||
T Consensus 248 ~l~~li~~~l~~dp~~Rps~~~l 270 (291)
T 1xbb_A 248 EMYDLMNLCWTYDVENRPGFAAV 270 (291)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHH
Confidence 47899999999999999999864
No 210
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=331.05 Aligned_cols=225 Identities=18% Similarity=0.239 Sum_probs=189.7
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc----chhhhhHHHHHHHHHhcCCCeeeeEEeeee--cCCce
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC----GRAFKSFDIECEIMKSIHYRNLVKIISSCS--NEEFK 496 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~ 496 (652)
.++|.+.+.||+|+||.||+|... +++.||+|+++... ......+.+|++++++++||||+++++++. ..+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999975 68899999997542 234577899999999999999999999984 45688
Q ss_pred EEEEEccCCCChhhhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccc
Q 041689 497 ELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLL 575 (652)
Q Consensus 497 ~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 575 (652)
++||||++++ +.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999886 66666543 34689999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCccccccccCCccccCccccccCc--cCcccchhhHHHHHHHHHhCCCCcch-----------------------h
Q 041689 576 IGEDQSMTQTQTLATIGYIAPEYGREGR--VFANGDVYSFGIMLMEIHSAKQQCVS-----------------------F 630 (652)
Q Consensus 576 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~vl~elltg~~p~~~-----------------------~ 630 (652)
.............||+.|+|||++.+.. ++.++||||+||++|||++|+.||.. .
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 239 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPP 239 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCCSSSCHH
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCCCccCHH
Confidence 4333333334556899999999987643 47899999999999999999999643 3
Q ss_pred hhhhhcccchhhhccccCccCC
Q 041689 631 VFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 631 l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+.+++.+||..||++|||++|+
T Consensus 240 l~~li~~~l~~dp~~Rps~~~l 261 (305)
T 2wtk_C 240 LSDLLKGMLEYEPAKRFSIRQI 261 (305)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHHHHHHccCChhhCCCHHHH
Confidence 7899999999999999999864
No 211
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=6.6e-40 Score=343.76 Aligned_cols=218 Identities=21% Similarity=0.275 Sum_probs=172.8
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecC------C
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNE------E 494 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~ 494 (652)
..+|++.+.||+|+||.||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 468999999999999999999864 6899999998653 233456788999999999999999999998654 5
Q ss_pred ceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcc
Q 041689 495 FKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL 574 (652)
Q Consensus 495 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~ 574 (652)
..|+||||+ +++|.+++... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 679999999 67999988753 589999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCccccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCCcch------------------------
Q 041689 575 LIGEDQSMTQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQCVS------------------------ 629 (652)
Q Consensus 575 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~------------------------ 629 (652)
... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 182 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~ 256 (367)
T 2fst_X 182 TAD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred ccc-----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 421 2334578999999999876 6789999999999999999999999742
Q ss_pred ------------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ------------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ------------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||..||++|||++|+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~ 309 (367)
T 2fst_X 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 309 (367)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred hhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHH
Confidence 25689999999999999999763
No 212
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=335.00 Aligned_cols=223 Identities=21% Similarity=0.252 Sum_probs=184.4
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeee-----------
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS----------- 491 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----------- 491 (652)
.++|.+.+.||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 367899999999999999999976 48999999998766666778899999999999999999999873
Q ss_pred ---cCCceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeC-CCCcEEEe
Q 041689 492 ---NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLD-DTMVAHLS 567 (652)
Q Consensus 492 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~-~~~~~kl~ 567 (652)
.....++||||++ |+|.+++... .+++..+..++.|++.||+|||++ ||+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999998 5999988654 589999999999999999999999 999999999999997 67799999
Q ss_pred cccCCccccCCCC-ccccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCCcc-----------------
Q 041689 568 DFGITKLLIGEDQ-SMTQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQCV----------------- 628 (652)
Q Consensus 568 Dfg~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~----------------- 628 (652)
|||.++....... ........++..|+|||.+.+ ..++.++|||||||++|||++|+.||.
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 243 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 9999986532211 112234457899999998765 678999999999999999999999863
Q ss_pred ------------------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ------------------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ------------------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 303 (320)
T 2i6l_A 244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEA 303 (320)
T ss_dssp CCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred CchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHH
Confidence 346789999999999999999874
No 213
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=3.3e-40 Score=347.46 Aligned_cols=220 Identities=10% Similarity=0.058 Sum_probs=172.2
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhc--CCCeeeeEE-------eee
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSI--HYRNLVKII-------SSC 490 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l--~h~niv~~~-------~~~ 490 (652)
..+|.+.+.||+|+||.||+|++. +|+.||||+++... ....+.+.+|+++++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345888999999999999999965 78999999998653 23455677886555555 699988865 333
Q ss_pred ecC-----------------CceEEEEEccCCCChhhhhhcCCCCCCHHHH------HHHHHHHHHHHHHHHcCCCCCeE
Q 041689 491 SNE-----------------EFKELVLEHMPHGSLEKCLYSSNCILDIFQR------LNIMIDVASVLEYLHFNFLVPVI 547 (652)
Q Consensus 491 ~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~~~~~ii 547 (652)
... ...|+||||++ |+|.+++......+++..+ ..++.|++.||+|||++ ||+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCc
Confidence 322 23799999999 7999999865434555555 67789999999999999 999
Q ss_pred ecCCCCCCeeeCCCCcEEEecccCCccccCCCCccccccccCCccccCcccccc--CccCcccchhhHHHHHHHHHhCCC
Q 041689 548 HCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE--GRVFANGDVYSFGIMLMEIHSAKQ 625 (652)
Q Consensus 548 H~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~ 625 (652)
||||||+|||++.++.+||+|||+++... .......+|+.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVG-----TRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETT-----CEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecC-----CCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999998652 11224456799999999987 689999999999999999999999
Q ss_pred Ccch--------------------------------hhhhhhcccchhhhccccCccCC
Q 041689 626 QCVS--------------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 626 p~~~--------------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
||.. .+.+++.+||+.||++|||++|+
T Consensus 292 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 350 (371)
T 3q60_A 292 PFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEA 350 (371)
T ss_dssp STTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHH
T ss_pred CCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 8533 37889999999999999999764
No 214
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=348.21 Aligned_cols=327 Identities=20% Similarity=0.257 Sum_probs=205.7
Q ss_pred eeEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCc-------cccccCC
Q 041689 8 KLELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIA-------DNYLTSS 80 (652)
Q Consensus 8 ~l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~-------~~~l~~~ 80 (652)
.|+++.|.++ ++|..+ +++|++|+|++|+|+++.|..|.++++|++|+|++|+|++..+..+ ...++.+
T Consensus 4 ~l~ls~n~l~---~ip~~~-~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 4 LVDRSKNGLI---HVPKDL-SQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp EEECTTSCCS---SCCCSC-CTTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred eEecCCCCcc---cccccc-cccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 4666666665 466655 3667777777777766666666677777777777776665543210 0111111
Q ss_pred CCCcccccccCCCCCCcEEEcccCCCcccC-CccchhcccccCcEEEccCCcccccCCccccCCCCC--CEEEecCccc-
Q 041689 81 TPELSFLSSLSNCKSLVVFLLSNNPLNGIL-PRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNL--TAIYLGGNKL- 156 (652)
Q Consensus 81 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~-~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~L~~N~l- 156 (652)
... .+... .+++|++|+|++|+++++. |. .++.+++ |++|++++|+|++ ..|..+++| +.|+|++|.+
T Consensus 80 ~l~--~lp~~-~l~~L~~L~L~~N~l~~~~~p~-~~~~l~~-L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~ 151 (520)
T 2z7x_B 80 KLV--KISCH-PTVNLKHLDLSFNAFDALPICK-EFGNMSQ-LKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETY 151 (520)
T ss_dssp CCC--EEECC-CCCCCSEEECCSSCCSSCCCCG-GGGGCTT-CCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTT
T ss_pred cee--ecCcc-ccCCccEEeccCCccccccchh-hhccCCc-ceEEEecCcccch---hhccccccceeeEEEeeccccc
Confidence 110 01111 4555666666666665532 23 4555554 6666666655543 233444444 4444444444
Q ss_pred -cccCCccccCCC-------------------------------------------------------------------
Q 041689 157 -NGSIPFTLRELQ------------------------------------------------------------------- 168 (652)
Q Consensus 157 -~~~~~~~~~~l~------------------------------------------------------------------- 168 (652)
.+..|..+..++
T Consensus 152 ~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~ 231 (520)
T 2z7x_B 152 GEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIE 231 (520)
T ss_dssp TSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEE
T ss_pred ccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccc
Confidence 333444443322
Q ss_pred ----------------CCcEEecccCccccccCccc--------------------------------------------
Q 041689 169 ----------------KLQYVGLKDNKLEGTIPYDI-------------------------------------------- 188 (652)
Q Consensus 169 ----------------~L~~L~L~~N~l~~~~~~~~-------------------------------------------- 188 (652)
+|++|++++|++++.+|..+
T Consensus 232 l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~ 311 (520)
T 2z7x_B 232 TTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSG 311 (520)
T ss_dssp EEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEES
T ss_pred cCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCC
Confidence 56666666666665555544
Q ss_pred ---------cCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCC----CCCcccCCCCccceEecccccCCccCc
Q 041689 189 ---------FRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDG----PLPLEIGNLKVLIGIDFSMNNFSSVIP 255 (652)
Q Consensus 189 ---------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~----~~~~~~~~l~~L~~L~ls~N~l~~~~~ 255 (652)
..+++|++|++++|++++..|..+..+++|++|+|++|.. .+|..++.+++|+.|++++|++++.+|
T Consensus 312 n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~ 391 (520)
T 2z7x_B 312 TRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEK 391 (520)
T ss_dssp SCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGG
T ss_pred CccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccc
Confidence 4566777777777777777777777778888888887762 234557777788888888888876333
Q ss_pred -ccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCC-CCCCC
Q 041689 256 -TTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPK-GGSFG 333 (652)
Q Consensus 256 -~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~~ 333 (652)
..+..+++|++|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|++++|++++.++. ...+.
T Consensus 392 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~ 468 (520)
T 2z7x_B 392 KGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLT 468 (520)
T ss_dssp GCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred cchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCC
Confidence 3477777888888888887766666554 67888888888887 6666666888888888888888865554 56677
Q ss_pred CcccccccCCccCCCC
Q 041689 334 NFSAESFEGNKLLCGS 349 (652)
Q Consensus 334 ~l~~~~~~~N~~~c~~ 349 (652)
.++.+++++|++.|..
T Consensus 469 ~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 469 SLQKIWLHTNPWDCSC 484 (520)
T ss_dssp TCCEEECCSSCBCCCH
T ss_pred cccEEECcCCCCcccC
Confidence 8888888888888853
No 215
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=337.75 Aligned_cols=226 Identities=21% Similarity=0.242 Sum_probs=178.6
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcC-CCeeeeEEeeee--------c
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH-YRNLVKIISSCS--------N 492 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~--------~ 492 (652)
...+|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+.+++++. ||||+++++++. .
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 4457999999999999999999965 68999999997665566678899999999996 999999999983 3
Q ss_pred CCceEEEEEccCCCChhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCC--eEecCCCCCCeeeCCCCcEEEec
Q 041689 493 EEFKELVLEHMPHGSLEKCLYS--SNCILDIFQRLNIMIDVASVLEYLHFNFLVP--VIHCDLKPSNVLLDDTMVAHLSD 568 (652)
Q Consensus 493 ~~~~~lv~e~~~~g~L~~~l~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~dlkp~NIll~~~~~~kl~D 568 (652)
....++||||+. |+|.+++.. ....+++.++..++.|++.||+|||++ + |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEec
Confidence 345789999996 699888764 334699999999999999999999998 8 99999999999999999999999
Q ss_pred ccCCccccCCCCcc----------ccccccCCccccCcccc---ccCccCcccchhhHHHHHHHHHhCCCCcch------
Q 041689 569 FGITKLLIGEDQSM----------TQTQTLATIGYIAPEYG---REGRVFANGDVYSFGIMLMEIHSAKQQCVS------ 629 (652)
Q Consensus 569 fg~~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwslG~vl~elltg~~p~~~------ 629 (652)
||+++......... ......+|+.|+|||++ .+..++.++|||||||++|||++|+.||..
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~ 261 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI 261 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh
Confidence 99998753322110 11134589999999998 566788999999999999999999999653
Q ss_pred ---------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ---------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ---------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~ 299 (337)
T 3ll6_A 262 VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEV 299 (337)
T ss_dssp ----CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHH
T ss_pred hcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHH
Confidence 37799999999999999999864
No 216
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.3e-39 Score=340.06 Aligned_cols=221 Identities=20% Similarity=0.283 Sum_probs=193.9
Q ss_pred hcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchh-----------------hhhHHHHHHHHHhcCCCeeeeE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRA-----------------FKSFDIECEIMKSIHYRNLVKI 486 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~~ 486 (652)
.++|.+.+.||+|+||.||+|+. +++.||+|++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999999 89999999997542211 1788999999999999999999
Q ss_pred EeeeecCCceEEEEEccCCCChhhh------hhcC-CCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEecCCCCCCeee
Q 041689 487 ISSCSNEEFKELVLEHMPHGSLEKC------LYSS-NCILDIFQRLNIMIDVASVLEYLHF-NFLVPVIHCDLKPSNVLL 558 (652)
Q Consensus 487 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dlkp~NIll 558 (652)
++++.+.+..++||||+++++|.++ +... ...+++..+..++.|++.||.|||+ + ||+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 9999999999999999999999998 5542 3478999999999999999999998 8 99999999999999
Q ss_pred CCCCcEEEecccCCccccCCCCccccccccCCccccCccccccC-ccCc-ccchhhHHHHHHHHHhCCCCcc--------
Q 041689 559 DDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREG-RVFA-NGDVYSFGIMLMEIHSAKQQCV-------- 628 (652)
Q Consensus 559 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDvwslG~vl~elltg~~p~~-------- 628 (652)
+.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++|||||||++|||++|+.||.
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 261 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL 261 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 99999999999999865321 33455689999999999877 6666 8999999999999999998863
Q ss_pred -----------------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 -----------------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 -----------------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++|+
T Consensus 262 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~ 320 (348)
T 2pml_X 262 FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDA 320 (348)
T ss_dssp HHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred HHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHH
Confidence 235789999999999999999864
No 217
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-39 Score=334.81 Aligned_cols=226 Identities=25% Similarity=0.342 Sum_probs=185.1
Q ss_pred HHHhcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhc--CCCeeeeEEeeeecC----C
Q 041689 421 CRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSI--HYRNLVKIISSCSNE----E 494 (652)
Q Consensus 421 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~----~ 494 (652)
....++|++.+.||+|+||.||+|+.. ++.||||++... ....+..|.+++... +||||+++++++... .
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 334568999999999999999999885 899999998644 223445566666554 899999999998877 6
Q ss_pred ceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCC-----CCCeEecCCCCCCeeeCCCCcEEEecc
Q 041689 495 FKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF-----LVPVIHCDLKPSNVLLDDTMVAHLSDF 569 (652)
Q Consensus 495 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~iiH~dlkp~NIll~~~~~~kl~Df 569 (652)
..++||||+++|+|.+++... .+++..+..++.|++.||+|||++. .++|+||||||+||+++.++.+||+||
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 186 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADL 186 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred ceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeC
Confidence 789999999999999999765 4899999999999999999999752 348999999999999999999999999
Q ss_pred cCCccccCCCCcc--ccccccCCccccCccccccCccCcc------cchhhHHHHHHHHHhC----------CCCcch--
Q 041689 570 GITKLLIGEDQSM--TQTQTLATIGYIAPEYGREGRVFAN------GDVYSFGIMLMEIHSA----------KQQCVS-- 629 (652)
Q Consensus 570 g~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~------sDvwslG~vl~elltg----------~~p~~~-- 629 (652)
|+++.+....... ......||+.|+|||++.+..++.+ +|||||||++|||++| +.||..
T Consensus 187 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~ 266 (337)
T 3mdy_A 187 GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLV 266 (337)
T ss_dssp TTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhc
Confidence 9997653322211 1224569999999999887766655 9999999999999999 555432
Q ss_pred ---------------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ---------------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ---------------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 322 (337)
T 3mdy_A 267 PSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRV 322 (337)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred CCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHH
Confidence 26789999999999999999874
No 218
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.3e-39 Score=336.17 Aligned_cols=221 Identities=24% Similarity=0.280 Sum_probs=186.4
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc--------chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCC
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC--------GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEE 494 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 494 (652)
.++|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 357999999999999999999865 58899999986432 122346889999999999999999999987665
Q ss_pred ceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCc---EEEecccC
Q 041689 495 FKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMV---AHLSDFGI 571 (652)
Q Consensus 495 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~---~kl~Dfg~ 571 (652)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||+
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred -eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 899999999999999887654 689999999999999999999999 9999999999999986654 99999999
Q ss_pred CccccCCCCccccccccCCccccCccccc---cCccCcccchhhHHHHHHHHHhCCCCcch-------------------
Q 041689 572 TKLLIGEDQSMTQTQTLATIGYIAPEYGR---EGRVFANGDVYSFGIMLMEIHSAKQQCVS------------------- 629 (652)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~------------------- 629 (652)
++.... ........||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 164 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 240 (322)
T 2ycf_A 164 SKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240 (322)
T ss_dssp CEECCC---CHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCC
T ss_pred ceeccc---ccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccC
Confidence 986521 12223456899999999863 56788999999999999999999999632
Q ss_pred ---------hhhhhhcccchhhhccccCccCC
Q 041689 630 ---------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ---------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||..||++|||++|+
T Consensus 241 ~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~ 272 (322)
T 2ycf_A 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 272 (322)
T ss_dssp HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred chhhhhcCHHHHHHHHHHcccCHhhCCCHHHH
Confidence 26789999999999999999764
No 219
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3e-40 Score=337.62 Aligned_cols=229 Identities=23% Similarity=0.310 Sum_probs=177.0
Q ss_pred HHHhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEE
Q 041689 421 CRATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKEL 498 (652)
Q Consensus 421 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 498 (652)
....++|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 344678999999999999999999864 68999999986542 3345678899999999999999999999999999999
Q ss_pred EEEccCCCChhhhhhc-------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccC
Q 041689 499 VLEHMPHGSLEKCLYS-------SNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGI 571 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~ 571 (652)
||||+++++|.+++.. ....+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 9999999999998864 233689999999999999999999999 999999999999999999999999999
Q ss_pred CccccCCCC---ccccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCCcch------------------
Q 041689 572 TKLLIGEDQ---SMTQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQCVS------------------ 629 (652)
Q Consensus 572 ~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~------------------ 629 (652)
+........ ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 247 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCT
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcc
Confidence 876532211 111234468999999999876 5689999999999999999999998643
Q ss_pred ---------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ---------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ---------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l 285 (303)
T 2vwi_A 248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285 (303)
T ss_dssp TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHH
Confidence 35779999999999999999874
No 220
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=347.29 Aligned_cols=220 Identities=20% Similarity=0.266 Sum_probs=173.0
Q ss_pred CCc-cceeccccceEEEEEEeC---CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeee--cCCceEEEE
Q 041689 427 FNE-NNLIGKGGFGTIYKSRIG---DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCS--NEEFKELVL 500 (652)
Q Consensus 427 y~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~lv~ 500 (652)
|.+ .++||+|+||.||+|+.. +++.||+|++.... ....+.+|++++++++||||+++++++. .....++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 555 468999999999999865 57889999996542 2356789999999999999999999994 467899999
Q ss_pred EccCCCChhhhhhcC--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee----CCCCcEEEec
Q 041689 501 EHMPHGSLEKCLYSS--------NCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL----DDTMVAHLSD 568 (652)
Q Consensus 501 e~~~~g~L~~~l~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll----~~~~~~kl~D 568 (652)
||+++ +|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 99975 887776522 12489999999999999999999999 99999999999999 6788999999
Q ss_pred ccCCccccCCCCc-cccccccCCccccCccccccC-ccCcccchhhHHHHHHHHHhCCCCc-------------------
Q 041689 569 FGITKLLIGEDQS-MTQTQTLATIGYIAPEYGREG-RVFANGDVYSFGIMLMEIHSAKQQC------------------- 627 (652)
Q Consensus 569 fg~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~------------------- 627 (652)
||+++........ .......||+.|+|||++.+. .++.++||||+||++|||++|+.||
T Consensus 176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~ 255 (405)
T 3rgf_A 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 255 (405)
T ss_dssp TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHH
T ss_pred CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHH
Confidence 9999876322111 223445789999999998774 5899999999999999999999998
Q ss_pred ---------------------------------------------------chhhhhhhcccchhhhccccCccCC
Q 041689 628 ---------------------------------------------------VSFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 628 ---------------------------------------------------~~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+..+.+++.+||..||++|||++|+
T Consensus 256 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~ 331 (405)
T 3rgf_A 256 RIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 331 (405)
T ss_dssp HHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 3446689999999999999999874
No 221
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.5e-41 Score=344.57 Aligned_cols=219 Identities=25% Similarity=0.387 Sum_probs=172.6
Q ss_pred cCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHh--cCCCeeeeEEeeeecCC----ceEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKS--IHYRNLVKIISSCSNEE----FKEL 498 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~----~~~l 498 (652)
++|.+.+.||+|+||.||+|++ +++.||||+++.. ....+.+|.+++.. ++||||+++++++...+ ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 5799999999999999999987 4899999998643 33566778888887 79999999999998776 7899
Q ss_pred EEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHH--------cCCCCCeEecCCCCCCeeeCCCCcEEEeccc
Q 041689 499 VLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH--------FNFLVPVIHCDLKPSNVLLDDTMVAHLSDFG 570 (652)
Q Consensus 499 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg 570 (652)
||||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||
T Consensus 79 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DFg 153 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCC
T ss_pred EEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeecC
Confidence 99999999999999765 4778888999999999999999 77 99999999999999999999999999
Q ss_pred CCccccCCCCcc--ccccccCCccccCccccccC------ccCcccchhhHHHHHHHHHhC----------CCCcch---
Q 041689 571 ITKLLIGEDQSM--TQTQTLATIGYIAPEYGREG------RVFANGDVYSFGIMLMEIHSA----------KQQCVS--- 629 (652)
Q Consensus 571 ~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~vl~elltg----------~~p~~~--- 629 (652)
+++......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||..
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3gxj_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp C-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC
T ss_pred cceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCC
Confidence 997654332221 12334699999999998776 455789999999999999999 555422
Q ss_pred --------------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 --------------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 --------------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i 288 (303)
T 3gxj_A 234 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 288 (303)
T ss_dssp -CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHH
T ss_pred CCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHH
Confidence 36789999999999999999874
No 222
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=343.52 Aligned_cols=220 Identities=13% Similarity=0.152 Sum_probs=188.1
Q ss_pred hcCCCccceeccccceEEEEEEeCC---------CcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeee---------
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGD---------GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVK--------- 485 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 485 (652)
.++|.+.+.||+|+||.||+|+... ++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3678999999999999999998753 789999998743 56889999999999999987
Q ss_pred ------EEeeeec-CCceEEEEEccCCCChhhhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCee
Q 041689 486 ------IISSCSN-EEFKELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVL 557 (652)
Q Consensus 486 ------~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIl 557 (652)
+++++.. ++..++||||+ +++|.+++... ...+++.++..++.|++.||+|||++ ||+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence 5666655 67889999999 99999999875 24799999999999999999999999 9999999999999
Q ss_pred eCCCC--cEEEecccCCccccCCCCc-----cccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc--
Q 041689 558 LDDTM--VAHLSDFGITKLLIGEDQS-----MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV-- 628 (652)
Q Consensus 558 l~~~~--~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~-- 628 (652)
++.++ .+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999865322111 11133468999999999999999999999999999999999999964
Q ss_pred --------------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 --------------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 --------------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++||
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 327 (352)
T 2jii_A 272 LPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAML 327 (352)
T ss_dssp TTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred CcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHH
Confidence 346789999999999999999864
No 223
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3e-38 Score=354.83 Aligned_cols=235 Identities=21% Similarity=0.206 Sum_probs=148.0
Q ss_pred ccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCC-ccccCC
Q 041689 89 SLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIP-FTLREL 167 (652)
Q Consensus 89 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l 167 (652)
.|.++++|++|+|++|+++.+++ .+..+++ |++|++++|++++..|..+..+++|++|++++|.+.+..| ..|..+
T Consensus 273 ~~~~l~~L~~L~l~~n~l~~lp~--~l~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l 349 (606)
T 3t6q_A 273 TFHCFSGLQELDLTATHLSELPS--GLVGLST-LKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENL 349 (606)
T ss_dssp TTTTCTTCSEEECTTSCCSCCCS--SCCSCTT-CCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTC
T ss_pred HhccccCCCEEeccCCccCCCCh--hhccccc-CCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhcc
Confidence 36778888888888888886544 4566665 8888888888887777777777777777777777764443 346777
Q ss_pred CCCcEEecccCcccccc--CccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC--CCCCc-ccCCCCccce
Q 041689 168 QKLQYVGLKDNKLEGTI--PYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND--GPLPL-EIGNLKVLIG 242 (652)
Q Consensus 168 ~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~--~~~~~-~~~~l~~L~~ 242 (652)
++|++|++++|.+++.. +..+..+++|++|++++|++.+..+..|..+++|++|++++|. ...+. .+.++++|+.
T Consensus 350 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 429 (606)
T 3t6q_A 350 ENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKV 429 (606)
T ss_dssp TTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCE
T ss_pred CcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCE
Confidence 77777777777776554 5566666777777777777766666666666666666666664 22222 2555666666
Q ss_pred EecccccCCccCcccccCCCCCcEEEccCCcCCCc---ccccccccccCcceeccccccCCCCchhhcCCCCCceEEeec
Q 041689 243 IDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGS---IPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSF 319 (652)
Q Consensus 243 L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 319 (652)
|++++|.+++..|..|..+++|++|++++|++++. .+..+..+++|+.|+|++|++++..|..|..+++|+.|+|++
T Consensus 430 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 509 (606)
T 3t6q_A 430 LNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSH 509 (606)
T ss_dssp EECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCC
Confidence 66666666555555555555555555555555431 123345555555555555555544455555555555555555
Q ss_pred CcCcccC
Q 041689 320 NKLEGEI 326 (652)
Q Consensus 320 N~l~~~~ 326 (652)
|++++.+
T Consensus 510 N~l~~~~ 516 (606)
T 3t6q_A 510 NRLTSSS 516 (606)
T ss_dssp SCCCGGG
T ss_pred CccCcCC
Confidence 5554443
No 224
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=364.32 Aligned_cols=223 Identities=24% Similarity=0.355 Sum_probs=187.2
Q ss_pred CCCccc-eeccccceEEEEEEeC---CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 426 GFNENN-LIGKGGFGTIYKSRIG---DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 426 ~y~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
++.+.+ .||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++||||+++++++.. +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 334444 7999999999999753 46679999997653 3356789999999999999999999999976 5689999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
||+++|+|.+++......+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.......
T Consensus 415 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp ECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred EeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 99999999999987766799999999999999999999999 999999999999999999999999999987532221
Q ss_pred cc-ccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------hhhhhh
Q 041689 581 SM-TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------SFVFNL 634 (652)
Q Consensus 581 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~~l~~l 634 (652)
.. ......+++.|+|||++.++.++.++|||||||++|||++ |+.||. ..+.++
T Consensus 492 ~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~l 571 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYAL 571 (613)
T ss_dssp ----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred eeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHH
Confidence 11 1122345688999999999999999999999999999998 998854 347899
Q ss_pred hcccchhhhccccCccCC
Q 041689 635 AMECTIESLELRINAKEI 652 (652)
Q Consensus 635 ~~~~l~~~p~~Rpt~~ei 652 (652)
+.+||..||++||+++||
T Consensus 572 i~~cl~~dP~~RPs~~~l 589 (613)
T 2ozo_A 572 MSDCWIYKWEDRPDFLTV 589 (613)
T ss_dssp HHHTTCSSTTTSCCHHHH
T ss_pred HHHHcCCChhHCcCHHHH
Confidence 999999999999999864
No 225
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.2e-39 Score=344.48 Aligned_cols=196 Identities=23% Similarity=0.236 Sum_probs=167.1
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcC--------CCeeeeEEeeee---
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH--------YRNLVKIISSCS--- 491 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~--- 491 (652)
.++|++.+.||+|+||.||+|+.. +++.||||+++.. ....+.+.+|++++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 367999999999999999999864 6889999999754 334567889999999985 788999999987
Q ss_pred -cCCceEEEEEccCCCChhhhhhcC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCC-------
Q 041689 492 -NEEFKELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTM------- 562 (652)
Q Consensus 492 -~~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~------- 562 (652)
.....++||||+.+ ++.+.+... ...+++..+..++.|++.||+|||+++ ||+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 115 VNGTHICMVFEVLGH-HLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TTEEEEEEEECCCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCCceEEEEEeccCc-cHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhh
Confidence 55688999999954 665555443 346999999999999999999999853 899999999999999775
Q ss_pred ------------------------------------------cEEEecccCCccccCCCCccccccccCCccccCccccc
Q 041689 563 ------------------------------------------VAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGR 600 (652)
Q Consensus 563 ------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 600 (652)
.+||+|||.++.... ......||+.|+|||++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~-----~~~~~~gt~~y~aPE~~~ 266 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK-----HFTEDIQTRQYRSLEVLI 266 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB-----CSCSCCSCGGGCCHHHHH
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc-----cCccCCCCCcccCChhhc
Confidence 799999999986522 133456899999999999
Q ss_pred cCccCcccchhhHHHHHHHHHhCCCCcc
Q 041689 601 EGRVFANGDVYSFGIMLMEIHSAKQQCV 628 (652)
Q Consensus 601 ~~~~~~~sDvwslG~vl~elltg~~p~~ 628 (652)
+..++.++|||||||++|||++|+.||.
T Consensus 267 ~~~~~~~~DiwslG~il~elltg~~pf~ 294 (397)
T 1wak_A 267 GSGYNTPADIWSTACMAFELATGDYLFE 294 (397)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CCCCCcHHHHHHHHHHHHHHhhCCCCCC
Confidence 9999999999999999999999999985
No 226
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5.6e-39 Score=334.27 Aligned_cols=228 Identities=25% Similarity=0.370 Sum_probs=191.7
Q ss_pred cHHHHHHHhcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHh--cCCCeeeeEEeeeecC
Q 041689 416 SYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKS--IHYRNLVKIISSCSNE 493 (652)
Q Consensus 416 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~ 493 (652)
+........++|.+.+.||+|+||.||+|+. +++.||||++... ....+.+|+++++. ++||||+++++++...
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 3333444566899999999999999999998 5899999999643 34567788998887 7899999999999877
Q ss_pred C----ceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHH--------cCCCCCeEecCCCCCCeeeCCC
Q 041689 494 E----FKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH--------FNFLVPVIHCDLKPSNVLLDDT 561 (652)
Q Consensus 494 ~----~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~iiH~dlkp~NIll~~~ 561 (652)
+ ..++||||+++|+|.+++... .+++.++..++.|++.||+||| +. +|+||||||+||+++.+
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~ 183 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKN 183 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTT
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCC
Confidence 5 789999999999999999765 4899999999999999999999 77 99999999999999999
Q ss_pred CcEEEecccCCccccCCCCcc--ccccccCCccccCccccccC------ccCcccchhhHHHHHHHHHhC----------
Q 041689 562 MVAHLSDFGITKLLIGEDQSM--TQTQTLATIGYIAPEYGREG------RVFANGDVYSFGIMLMEIHSA---------- 623 (652)
Q Consensus 562 ~~~kl~Dfg~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~vl~elltg---------- 623 (652)
+.+||+|||++.......... ......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 184 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~ 263 (342)
T 1b6c_B 184 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 263 (342)
T ss_dssp SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccc
Confidence 999999999998764332211 22345699999999998765 344789999999999999999
Q ss_pred CCCcch-----------------------------------hhhhhhcccchhhhccccCccCC
Q 041689 624 KQQCVS-----------------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 624 ~~p~~~-----------------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+.||.. .+.+++.+||+.||++|||++||
T Consensus 264 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i 327 (342)
T 1b6c_B 264 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 327 (342)
T ss_dssp CCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred ccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHH
Confidence 566422 25689999999999999999874
No 227
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.2e-39 Score=343.56 Aligned_cols=218 Identities=24% Similarity=0.330 Sum_probs=181.6
Q ss_pred cCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCC------ceEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEE------FKEL 498 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~l 498 (652)
.+|++.+.||+|+||.||+|+...+..||+|++.... ....+|+++++.++||||+++++++...+ ..++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 4689999999999999999998777779999886432 22246999999999999999999985433 3789
Q ss_pred EEEccCCCChhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeC-CCCcEEEecccCCccc
Q 041689 499 VLEHMPHGSLEKCLY--SSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLD-DTMVAHLSDFGITKLL 575 (652)
Q Consensus 499 v~e~~~~g~L~~~l~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~-~~~~~kl~Dfg~~~~~ 575 (652)
||||++++.+..... .....+++..+..++.|++.||+|||++ ||+||||||+||+++ .++.+||+|||+++..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 999998754433221 2234789999999999999999999999 999999999999999 7999999999999875
Q ss_pred cCCCCccccccccCCccccCccccccC-ccCcccchhhHHHHHHHHHhCCCCcch-------------------------
Q 041689 576 IGEDQSMTQTQTLATIGYIAPEYGREG-RVFANGDVYSFGIMLMEIHSAKQQCVS------------------------- 629 (652)
Q Consensus 576 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~------------------------- 629 (652)
... .......+|+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 193 ~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~ 269 (394)
T 4e7w_A 193 IAG---EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM 269 (394)
T ss_dssp CTT---CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred cCC---CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 322 223345689999999998765 589999999999999999999999742
Q ss_pred ---------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ---------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ---------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||+.|+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 319 (394)
T 4e7w_A 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEA 319 (394)
T ss_dssp CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHH
Confidence 36789999999999999998763
No 228
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=4.2e-39 Score=334.50 Aligned_cols=219 Identities=20% Similarity=0.249 Sum_probs=190.9
Q ss_pred hcCCCccceeccccceEEEEEEe-C-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCe------eeeEEeeeecCCc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI-G-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRN------LVKIISSCSNEEF 495 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~ 495 (652)
.++|++.+.||+|+||.||+|.+ . +++.||||+++.. ....+.+.+|+++++.++|++ |+++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 35799999999999999999986 3 6889999999754 344567889999999987664 9999999999999
Q ss_pred eEEEEEccCCCChhhhhhcCCC-CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCC--------------
Q 041689 496 KELVLEHMPHGSLEKCLYSSNC-ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDD-------------- 560 (652)
Q Consensus 496 ~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~-------------- 560 (652)
.++||||+ +++|.+++..... .+++.++..++.|++.||+|||++ ||+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 7899998876543 688999999999999999999999 9999999999999987
Q ss_pred -----CCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch------
Q 041689 561 -----TMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS------ 629 (652)
Q Consensus 561 -----~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~------ 629 (652)
++.+||+|||.++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 242 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDE-----HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTS-----CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH
T ss_pred cccccCCCceEeeCcccccCcc-----ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 66899999999986421 22345689999999999999999999999999999999999999742
Q ss_pred -------------------------------------------------------------hhhhhhcccchhhhccccC
Q 041689 630 -------------------------------------------------------------FVFNLAMECTIESLELRIN 648 (652)
Q Consensus 630 -------------------------------------------------------------~l~~l~~~~l~~~p~~Rpt 648 (652)
.+.+++.+||+.||++|||
T Consensus 243 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 322 (339)
T 1z57_A 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRIT 322 (339)
T ss_dssp HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccC
Confidence 2458999999999999999
Q ss_pred ccCC
Q 041689 649 AKEI 652 (652)
Q Consensus 649 ~~ei 652 (652)
++||
T Consensus 323 ~~el 326 (339)
T 1z57_A 323 LREA 326 (339)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9874
No 229
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=7.3e-40 Score=360.49 Aligned_cols=224 Identities=25% Similarity=0.383 Sum_probs=193.8
Q ss_pred HhcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEc
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 502 (652)
..++|++.+.||+|+||.||+|++.++..||||+++... ...+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 456788899999999999999999888889999997653 235678999999999999999999999876 678999999
Q ss_pred cCCCChhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCc
Q 041689 503 MPHGSLEKCLYSSN-CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 503 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 581 (652)
+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++..... ..
T Consensus 343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~ 418 (535)
T 2h8h_A 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN-EY 418 (535)
T ss_dssp CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH-HH
T ss_pred hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCC-ce
Confidence 99999999997532 3589999999999999999999999 9999999999999999999999999999865211 11
Q ss_pred cccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch------------------------hhhhhhc
Q 041689 582 MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS------------------------FVFNLAM 636 (652)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~------------------------~l~~l~~ 636 (652)
.......++..|+|||++..+.++.++|||||||++|||++ |+.||.. .+.+++.
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~ 498 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 498 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence 11223446788999999998999999999999999999999 8888643 3788999
Q ss_pred ccchhhhccccCccCC
Q 041689 637 ECTIESLELRINAKEI 652 (652)
Q Consensus 637 ~~l~~~p~~Rpt~~ei 652 (652)
+||+.||++|||++||
T Consensus 499 ~cl~~dP~~RPt~~~l 514 (535)
T 2h8h_A 499 QCWRKEPEERPTFEYL 514 (535)
T ss_dssp HHTCSSGGGSCCHHHH
T ss_pred HHcCCChhHCcCHHHH
Confidence 9999999999999864
No 230
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.2e-39 Score=332.96 Aligned_cols=231 Identities=19% Similarity=0.336 Sum_probs=190.5
Q ss_pred cHHHHHHHhcCCCccceeccccceEEEEEEeCCCcEEEEEEeecc--cchhhhhHHHHHHHHHhcC--CCeeeeEEeeee
Q 041689 416 SYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIH--YRNLVKIISSCS 491 (652)
Q Consensus 416 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~ 491 (652)
.+..+....++|++.+.||+|+||.||+|+..+++.||||++... .....+.+.+|++++++++ ||||+++++++.
T Consensus 19 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~ 98 (313)
T 3cek_A 19 YFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI 98 (313)
T ss_dssp -CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE
T ss_pred CeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEee
Confidence 333344456779999999999999999999888999999999754 2345577899999999997 599999999999
Q ss_pred cCCceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccC
Q 041689 492 NEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGI 571 (652)
Q Consensus 492 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~ 571 (652)
..+..++||| +.+++|.+++.... .+++.++..++.|++.||.|||++ +|+||||||+||++++ +.+||+|||+
T Consensus 99 ~~~~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~ 172 (313)
T 3cek_A 99 TDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGI 172 (313)
T ss_dssp CSSEEEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSS
T ss_pred cCCEEEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccc
Confidence 9999999999 56789999998755 689999999999999999999999 9999999999999975 7999999999
Q ss_pred CccccCCCCccccccccCCccccCcccccc-----------CccCcccchhhHHHHHHHHHhCCCCcch-----------
Q 041689 572 TKLLIGEDQSMTQTQTLATIGYIAPEYGRE-----------GRVFANGDVYSFGIMLMEIHSAKQQCVS----------- 629 (652)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~vl~elltg~~p~~~----------- 629 (652)
++...............|++.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 252 (313)
T 3cek_A 173 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252 (313)
T ss_dssp SCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHH
T ss_pred cccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHH
Confidence 987643322222334568999999999865 4788899999999999999999999643
Q ss_pred ---------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ---------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ---------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 253 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 290 (313)
T 3cek_A 253 IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 290 (313)
T ss_dssp HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHH
Confidence 37889999999999999999874
No 231
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.3e-39 Score=332.78 Aligned_cols=224 Identities=26% Similarity=0.376 Sum_probs=191.1
Q ss_pred HHhcCCCccceeccccceEEEEEEe--CCCcEEEEEEeecccc--hhhhhHHHHHHHHHhc---CCCeeeeEEeeee---
Q 041689 422 RATYGFNENNLIGKGGFGTIYKSRI--GDGMEVAVKVFHLQCG--RAFKSFDIECEIMKSI---HYRNLVKIISSCS--- 491 (652)
Q Consensus 422 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~--- 491 (652)
...++|++.+.||+|+||.||+|+. .+|+.||+|+++.... .....+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 4567899999999999999999987 3688999999975432 2234677888888776 8999999999987
Q ss_pred --cCCceEEEEEccCCCChhhhhhcCCC-CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEec
Q 041689 492 --NEEFKELVLEHMPHGSLEKCLYSSNC-ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSD 568 (652)
Q Consensus 492 --~~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~D 568 (652)
.....++||||++ |+|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEec
Confidence 5567899999998 599999876543 589999999999999999999999 999999999999999999999999
Q ss_pred ccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch-------------------
Q 041689 569 FGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS------------------- 629 (652)
Q Consensus 569 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~------------------- 629 (652)
||.++... .........+|+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 164 fg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 164 FGLARIYS---FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240 (326)
T ss_dssp CCSCCCCC---GGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCG
T ss_pred Cccccccc---CCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCc
Confidence 99998642 12233445689999999999999999999999999999999999999743
Q ss_pred -------------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 -------------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -------------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 294 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 294 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHH
Confidence 13589999999999999998764
No 232
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.5e-39 Score=339.47 Aligned_cols=217 Identities=20% Similarity=0.247 Sum_probs=186.2
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCce----
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ--CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFK---- 496 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---- 496 (652)
.++|.+.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|+.++++++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 467999999999999999999865 6899999999754 233456788999999999999999999999877654
Q ss_pred --EEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcc
Q 041689 497 --ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL 574 (652)
Q Consensus 497 --~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~ 574 (652)
++||||++ ++|.+++.. .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 588887643 489999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCccccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCCcc-------------------------
Q 041689 575 LIGEDQSMTQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQCV------------------------- 628 (652)
Q Consensus 575 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~------------------------- 628 (652)
... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.
T Consensus 194 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 194 ADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred ccc-----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHH
Confidence 421 2334568999999999877 678999999999999999999999974
Q ss_pred -----------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 -----------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 -----------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++|+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 321 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQA 321 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHH
Confidence 346889999999999999999864
No 233
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.5e-37 Score=350.92 Aligned_cols=135 Identities=23% Similarity=0.302 Sum_probs=110.2
Q ss_pred CCCCCEEEccCCC--CCCCcccCCCCccceEecccccC-CccCcccccCCCCCcEEEccCCcCCCcccccccccccCcce
Q 041689 215 LASLRTLSLSYND--GPLPLEIGNLKVLIGIDFSMNNF-SSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSL 291 (652)
Q Consensus 215 l~~L~~L~Ls~N~--~~~~~~~~~l~~L~~L~ls~N~l-~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 291 (652)
+++++.+++++|. ...+..+..++.|+.|++++|.+ .+..|..|..+++|++|+|++|+|++..|..|..+++|+.|
T Consensus 444 l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 3334444444443 22334456677788888888874 44578889999999999999999999999999999999999
Q ss_pred eccccccCCCCchhhcCCCCCceEEeecCcCcccCCCC-CCC-CCcccccccCCccCCCC
Q 041689 292 NFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKG-GSF-GNFSAESFEGNKLLCGS 349 (652)
Q Consensus 292 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~-~~l~~~~~~~N~~~c~~ 349 (652)
+|++|+|++..|..|.++++|+.|+|++|+|++.+|.. ..+ .+++.+++++|||.|..
T Consensus 524 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp ECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred ECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 99999999999999999999999999999999988864 344 57999999999999964
No 234
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.8e-38 Score=348.85 Aligned_cols=344 Identities=20% Similarity=0.185 Sum_probs=253.3
Q ss_pred ceeeeceeEeccCCCcCCccCCCCC-CCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCcc------
Q 041689 2 FSISIGKLELNVDDIESPCEIPSEI-NPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIAD------ 74 (652)
Q Consensus 2 ~~~~l~~l~l~~~~~~~~~~ip~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~------ 74 (652)
+|.+++.|+|+.|.++. ..|..+ ++++|++|+|++|+++++.|..|.++++|++|+|++|++++.++..+.
T Consensus 26 l~~~l~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (570)
T 2z63_A 26 LPFSTKNLDLSFNPLRH--LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQ 103 (570)
T ss_dssp SCSSCCEEECCSCCCCE--ECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred ccccccEEEccCCccCc--cChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccc
Confidence 57789999999999884 223345 789999999999999998899999999999999999999887754321
Q ss_pred -ccccCCCCCcccccccCCCCCCcEEEcccCCCcccC-CccchhcccccCcEEEccCCcccccCCccccCCCCC----CE
Q 041689 75 -NYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNGIL-PRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNL----TA 148 (652)
Q Consensus 75 -~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~-~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L----~~ 148 (652)
..+..+.........+.++++|++|+|++|.++++. |. .++++++ |++|++++|++++..+..|..+++| +.
T Consensus 104 ~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~-~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~ 181 (570)
T 2z63_A 104 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE-YFSNLTN-LEHLDLSSNKIQSIYCTDLRVLHQMPLLNLS 181 (570)
T ss_dssp EEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCG-GGGGCTT-CCEEECTTSCCCEECGGGGHHHHTCTTCCCE
T ss_pred cccccccccccCCCccccccccccEEecCCCccceecChh-hhcccCC-CCEEeCcCCccceecHHHccchhccchhhhh
Confidence 222222211111124788889999999999888753 54 6778876 9999999888876655555444444 44
Q ss_pred EEecCccccccC--------------------------------------------------------------------
Q 041689 149 IYLGGNKLNGSI-------------------------------------------------------------------- 160 (652)
Q Consensus 149 L~L~~N~l~~~~-------------------------------------------------------------------- 160 (652)
|++++|.+++..
T Consensus 182 L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~ 261 (570)
T 2z63_A 182 LDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEE 261 (570)
T ss_dssp EECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEE
T ss_pred cccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhh
Confidence 444444333222
Q ss_pred ------------------------------------Cccc----------------------------------------
Q 041689 161 ------------------------------------PFTL---------------------------------------- 164 (652)
Q Consensus 161 ------------------------------------~~~~---------------------------------------- 164 (652)
|..+
T Consensus 262 l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 262 FRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp EEEEETTEEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBC
T ss_pred hhhhcchhhhhhchhhhcCcCcccEEEecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccc
Confidence 1111
Q ss_pred --cCCCCCcEEecccCcccccc--CccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC--CCCC-cccCCC
Q 041689 165 --RELQKLQYVGLKDNKLEGTI--PYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND--GPLP-LEIGNL 237 (652)
Q Consensus 165 --~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~--~~~~-~~~~~l 237 (652)
..+++|++|++++|++++.. |..+..+++|++|++++|.+++..+. |..+++|++|++++|. ...+ ..+.++
T Consensus 342 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l 420 (570)
T 2z63_A 342 SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSL 420 (570)
T ss_dssp CCCBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTC
T ss_pred ccccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcC
Confidence 22344445555555554332 44555666677777777776655544 7778888888888875 2223 457888
Q ss_pred CccceEecccccCCccCcccccCCCCCcEEEccCCcCC-CcccccccccccCcceeccccccCCCCchhhcCCCCCceEE
Q 041689 238 KVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILK-GSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLN 316 (652)
Q Consensus 238 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 316 (652)
++|+.|++++|.+++..|..|.++++|++|++++|+++ +.+|..+..+++|+.|+|++|++++..|..|..+++|+.|+
T Consensus 421 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 500 (570)
T 2z63_A 421 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 500 (570)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEe
Confidence 99999999999998888888999999999999999987 57888899999999999999999988888999999999999
Q ss_pred eecCcCcccCCC-CCCCCCcccccccCCccCCCCC
Q 041689 317 LSFNKLEGEIPK-GGSFGNFSAESFEGNKLLCGSP 350 (652)
Q Consensus 317 L~~N~l~~~~p~-~~~~~~l~~~~~~~N~~~c~~~ 350 (652)
+++|++++.+|. ...+..++.+++++|++.|..+
T Consensus 501 l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 501 MASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 999999988775 4677889999999999988755
No 235
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.3e-39 Score=344.95 Aligned_cols=217 Identities=24% Similarity=0.331 Sum_probs=181.1
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecC------CceE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNE------EFKE 497 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~ 497 (652)
.+|+..+.||+|+||.||+|++. +|+.||||++.... ....+|++++++++||||+++++++... .+.+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 45888999999999999999975 58999999986542 2334799999999999999999988432 2467
Q ss_pred EEEEccCCCChhhhhh---cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCC-CcEEEecccCCc
Q 041689 498 LVLEHMPHGSLEKCLY---SSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDT-MVAHLSDFGITK 573 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~-~~~kl~Dfg~~~ 573 (652)
+||||+++ ++.+.+. .....+++..+..++.|++.||+|||++ ||+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999986 6665543 2334789999999999999999999999 99999999999999954 678999999998
Q ss_pred cccCCCCccccccccCCccccCccccccC-ccCcccchhhHHHHHHHHHhCCCCcc------------------------
Q 041689 574 LLIGEDQSMTQTQTLATIGYIAPEYGREG-RVFANGDVYSFGIMLMEIHSAKQQCV------------------------ 628 (652)
Q Consensus 574 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~------------------------ 628 (652)
.+... .......+|+.|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus 206 ~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 206 QLVRG---EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp ECCTT---CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred hcccC---CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 75322 222345689999999998764 78999999999999999999999973
Q ss_pred ----------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ----------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ----------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||..||++|||+.|+
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~ 334 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 334 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHH
Confidence 236789999999999999998763
No 236
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5e-39 Score=337.16 Aligned_cols=227 Identities=22% Similarity=0.238 Sum_probs=178.5
Q ss_pred HHHHHHhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCc-
Q 041689 418 LEVCRATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEF- 495 (652)
Q Consensus 418 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~- 495 (652)
.+.....++|.+.+.||+|+||.||+|+.. +|+.||||++.... .......+|++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 455677789999999999999999999875 68999999986542 334556778888999999999999999865332
Q ss_pred ------eEEEEEccCCCChhhhhh---cCCCCCCHHHHHHHHHHHHHHHHHHH--cCCCCCeEecCCCCCCeeeCC-CCc
Q 041689 496 ------KELVLEHMPHGSLEKCLY---SSNCILDIFQRLNIMIDVASVLEYLH--FNFLVPVIHCDLKPSNVLLDD-TMV 563 (652)
Q Consensus 496 ------~~lv~e~~~~g~L~~~l~---~~~~~l~~~~~~~i~~~i~~~L~~LH--~~~~~~iiH~dlkp~NIll~~-~~~ 563 (652)
.++||||+++ ++.+.+. .....+++..+..++.|++.||.||| +. ||+||||||+||+++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCc
Confidence 7899999987 5544333 23346889999999999999999999 77 9999999999999996 899
Q ss_pred EEEecccCCccccCCCCccccccccCCccccCccccccCc-cCcccchhhHHHHHHHHHhCCCCcc--------------
Q 041689 564 AHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGR-VFANGDVYSFGIMLMEIHSAKQQCV-------------- 628 (652)
Q Consensus 564 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~vl~elltg~~p~~-------------- 628 (652)
+||+|||+++..... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.
T Consensus 171 ~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~ 247 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPS---EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247 (360)
T ss_dssp EEECCCTTCBCCCTT---SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred EEEeeCCCceecCCC---CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHH
Confidence 999999999865322 2233456899999999986654 8999999999999999999999974
Q ss_pred -----------------------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 -----------------------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 -----------------------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 312 (360)
T 3e3p_A 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEA 312 (360)
T ss_dssp HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHH
Confidence 246789999999999999999864
No 237
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.1e-39 Score=329.37 Aligned_cols=218 Identities=31% Similarity=0.405 Sum_probs=183.7
Q ss_pred hcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeecC-CceEEEEEc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSNE-EFKELVLEH 502 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~ 502 (652)
.++|++.+.||+|+||.||+|+. +|+.||+|+++... ..+.+.+|++++++++||||+++++++... +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 46789999999999999999987 48899999997543 456789999999999999999999987544 578999999
Q ss_pred cCCCChhhhhhcCCC-CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCc
Q 041689 503 MPHGSLEKCLYSSNC-ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS 581 (652)
Q Consensus 503 ~~~g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 581 (652)
+++++|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~---- 169 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS---- 169 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc----
Confidence 999999999876432 378899999999999999999999 999999999999999999999999999875421
Q ss_pred cccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch------------------------hhhhhhc
Q 041689 582 MTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS------------------------FVFNLAM 636 (652)
Q Consensus 582 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~------------------------~l~~l~~ 636 (652)
......+++.|+|||++.+..++.++||||||+++|||++ |+.||.. .+.+++.
T Consensus 170 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 248 (278)
T 1byg_A 170 -TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMK 248 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHH
T ss_pred -cccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHH
Confidence 1223357889999999998899999999999999999998 9988542 3788999
Q ss_pred ccchhhhccccCccCC
Q 041689 637 ECTIESLELRINAKEI 652 (652)
Q Consensus 637 ~~l~~~p~~Rpt~~ei 652 (652)
+||+.||++|||++||
T Consensus 249 ~~l~~~p~~Rps~~~l 264 (278)
T 1byg_A 249 NCWHLDAAMRPSFLQL 264 (278)
T ss_dssp HHTCSSGGGSCCHHHH
T ss_pred HHhcCChhhCCCHHHH
Confidence 9999999999999864
No 238
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1e-37 Score=350.48 Aligned_cols=325 Identities=18% Similarity=0.166 Sum_probs=206.1
Q ss_pred ceeeeceeEeccCCCcCCccCCCCC-CCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCC
Q 041689 2 FSISIGKLELNVDDIESPCEIPSEI-NPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSS 80 (652)
Q Consensus 2 ~~~~l~~l~l~~~~~~~~~~ip~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~ 80 (652)
+|.+++.|+|+.|.++. ..|..+ ++++|++|+|++|+++++.|.+|.++++|++|+|++|++++..+.
T Consensus 31 l~~~l~~L~Ls~n~i~~--~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--------- 99 (606)
T 3t6q_A 31 LPNSTECLEFSFNVLPT--IQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAET--------- 99 (606)
T ss_dssp SCTTCCEEECTTCCCSE--ECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTT---------
T ss_pred CCCcCcEEEccCCccCc--CChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChh---------
Confidence 45667777777777763 235555 677777777777777777777777777777777777777765542
Q ss_pred CCCcccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccC
Q 041689 81 TPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSI 160 (652)
Q Consensus 81 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 160 (652)
.|.++++|++|+|++|+++++.+. .+..+++ |++|++++|+++++....+..+++|++|+|++|++++..
T Consensus 100 --------~~~~l~~L~~L~L~~n~i~~l~~~-~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 169 (606)
T 3t6q_A 100 --------ALSGPKALKHLFFIQTGISSIDFI-PLHNQKT-LESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLS 169 (606)
T ss_dssp --------TTSSCTTCCEEECTTSCCSCGGGS-CCTTCTT-CCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEEC
T ss_pred --------hhcccccccEeeccccCcccCCcc-hhccCCc-ccEEECCCCcccccCcccccCCcccCEEEcccCcccccC
Confidence 355666666666666666655444 4555554 666666666666544344444666666666666666555
Q ss_pred CccccCCCCCc--EEecccCccccccCccccCC-----------------------------------------------
Q 041689 161 PFTLRELQKLQ--YVGLKDNKLEGTIPYDIFRL----------------------------------------------- 191 (652)
Q Consensus 161 ~~~~~~l~~L~--~L~L~~N~l~~~~~~~~~~l----------------------------------------------- 191 (652)
|..|..+++|+ .|++++|.+++..|..|...
T Consensus 170 ~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~ 249 (606)
T 3t6q_A 170 KEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFE 249 (606)
T ss_dssp HHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGG
T ss_pred hhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhc
Confidence 66666666666 66666666665544433221
Q ss_pred ----CCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCCcccCCCCccceEecccccCCccCcccccCCCCCcE
Q 041689 192 ----VKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQY 266 (652)
Q Consensus 192 ----~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~ 266 (652)
.+|+.|++++|.++++.+..|..+++|++|++++|. ..+|..+.++++|++|++++|.+++..|..+..+++|++
T Consensus 250 ~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 329 (606)
T 3t6q_A 250 GLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTH 329 (606)
T ss_dssp GGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSE
T ss_pred hhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCE
Confidence 045566666666666666666667777777777765 456666666777777777777776666666666667777
Q ss_pred EEccCCcCCCccc-ccccccccCcceeccccccCCCC--chhhcCCCCCceEEeecCcCcccCCC-CCCCCCcccccccC
Q 041689 267 LFLGYNILKGSIP-DSVGDLISLKSLNFSNNNLSGAI--PLLLEKLSYLEHLNLSFNKLEGEIPK-GGSFGNFSAESFEG 342 (652)
Q Consensus 267 L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~~~l~~~~~~~ 342 (652)
|++++|.+.+.+| ..+..+++|+.|++++|++++.. +..+..+++|+.|++++|.+++..|. ...+..++.+++++
T Consensus 330 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 409 (606)
T 3t6q_A 330 LSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAF 409 (606)
T ss_dssp EECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTT
T ss_pred EECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCC
Confidence 7777776664443 33666666667777666666544 55666666666666666666655443 24555666666666
Q ss_pred CccCC
Q 041689 343 NKLLC 347 (652)
Q Consensus 343 N~~~c 347 (652)
|....
T Consensus 410 n~l~~ 414 (606)
T 3t6q_A 410 TRLKV 414 (606)
T ss_dssp CCEEC
T ss_pred CcCCC
Confidence 65543
No 239
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.4e-39 Score=328.82 Aligned_cols=225 Identities=21% Similarity=0.290 Sum_probs=185.5
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeec----------
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN---------- 492 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---------- 492 (652)
.++|++.+.||+|+||.||+|+.. +++.||+|++... ....+.+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 457999999999999999999865 7899999999654 3445778899999999999999999998754
Q ss_pred ---CCceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecc
Q 041689 493 ---EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDF 569 (652)
Q Consensus 493 ---~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Df 569 (652)
.+..++||||+++++|.+++......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeC
Confidence 3567899999999999999987666788899999999999999999999 9999999999999999999999999
Q ss_pred cCCccccCCCC------------ccccccccCCccccCccccccC-ccCcccchhhHHHHHHHHHhCCCC----------
Q 041689 570 GITKLLIGEDQ------------SMTQTQTLATIGYIAPEYGREG-RVFANGDVYSFGIMLMEIHSAKQQ---------- 626 (652)
Q Consensus 570 g~~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p---------- 626 (652)
|.++....... ........|++.|+|||++.+. .++.++||||+||++|||+++..+
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~p~~~~~~~~~~~~~ 240 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKK 240 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHH
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHhccCCchhHHHHHHh
Confidence 99986532110 1122345689999999998764 689999999999999999984332
Q ss_pred ---------------cchhhhhhhcccchhhhccccCccCC
Q 041689 627 ---------------CVSFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 627 ---------------~~~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+..+.+++.+||+.||++|||++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l 281 (303)
T 1zy4_A 241 LRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTL 281 (303)
T ss_dssp HHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHH
Confidence 11226889999999999999999864
No 240
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.7e-39 Score=327.43 Aligned_cols=223 Identities=22% Similarity=0.279 Sum_probs=176.8
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccc--hhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCG--RAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
.++|++.+.||+|+||.||+|+.. +|+.||+|+++.... .....+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 467999999999999999999864 789999999975422 22233445555678889999999999999999999999
Q ss_pred EccCCCChhhhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccC
Q 041689 501 EHMPHGSLEKCLYS---SNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 501 e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 577 (652)
||+++ ++.+++.. ....+++..+..++.|++.||+|||++. ||+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 99975 88777653 3447999999999999999999999842 899999999999999999999999999986532
Q ss_pred CCCccccccccCCccccCcccc----ccCccCcccchhhHHHHHHHHHhCCCCcch------------------------
Q 041689 578 EDQSMTQTQTLATIGYIAPEYG----REGRVFANGDVYSFGIMLMEIHSAKQQCVS------------------------ 629 (652)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwslG~vl~elltg~~p~~~------------------------ 629 (652)
. .......||+.|+|||++ .+..++.++||||+||++|||++|+.||..
T Consensus 163 ~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (290)
T 3fme_A 163 D---VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF 239 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTS
T ss_pred c---ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccC
Confidence 2 222334689999999995 566789999999999999999999999753
Q ss_pred --hhhhhhcccchhhhccccCccCC
Q 041689 630 --FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 --~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 240 ~~~~~~li~~~l~~~p~~Rpt~~e~ 264 (290)
T 3fme_A 240 SAEFVDFTSQCLKKNSKERPTYPEL 264 (290)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CHHHHHHHHHHhhcChhhCcCHHHH
Confidence 37889999999999999999874
No 241
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.5e-39 Score=330.58 Aligned_cols=225 Identities=24% Similarity=0.347 Sum_probs=184.1
Q ss_pred hcCCCccceeccccceEEEEEEeC--CCc--EEEEEEeecc---cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCce
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG--DGM--EVAVKVFHLQ---CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFK 496 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 496 (652)
.++|++.+.||+|+||.||+|++. +++ .||+|+++.. .....+.+.+|++++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357899999999999999999852 333 6899998754 2345678899999999999999999999998765 8
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcccc
Q 041689 497 ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576 (652)
Q Consensus 497 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 576 (652)
++||||+++++|.+++......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 899999999999999987655799999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCcc-ccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc-------------------------h
Q 041689 577 GEDQSM-TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV-------------------------S 629 (652)
Q Consensus 577 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~-------------------------~ 629 (652)
...... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||. .
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ 252 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCH
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCH
Confidence 332211 1233457888999999988889999999999999999999 998863 2
Q ss_pred hhhhhhcccchhhhccccCccCC
Q 041689 630 FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 253 ~l~~li~~~l~~~p~~Rps~~~l 275 (291)
T 1u46_A 253 DIYNVMVQCWAHKPEDRPTFVAL 275 (291)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHHHccCCcccCcCHHHH
Confidence 37899999999999999999864
No 242
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=5.7e-39 Score=335.78 Aligned_cols=223 Identities=23% Similarity=0.269 Sum_probs=188.2
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHHhcCCCeeeeEEeeeecC-----Cce
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDIECEIMKSIHYRNLVKIISSCSNE-----EFK 496 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~ 496 (652)
.++|.+.+.||+|+||.||+|+.. +|+.||||+++... ......+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467999999999999999999875 68999999996442 33456778999999999999999999987654 678
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcccc
Q 041689 497 ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576 (652)
Q Consensus 497 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 576 (652)
++||||++ ++|.+++... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999997 5999988764 589999999999999999999999 99999999999999999999999999998753
Q ss_pred CCCCcc--------ccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCCcch------------------
Q 041689 577 GEDQSM--------TQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQCVS------------------ 629 (652)
Q Consensus 577 ~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~------------------ 629 (652)
...... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCc
Confidence 221111 1123468999999998754 6789999999999999999999998742
Q ss_pred -------------------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 -------------------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -------------------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 303 (353)
T 2b9h_A 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303 (353)
T ss_dssp STTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred hhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHH
Confidence 24689999999999999999874
No 243
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=4.5e-39 Score=334.72 Aligned_cols=224 Identities=24% Similarity=0.325 Sum_probs=188.4
Q ss_pred HhcCCCccceeccccceEEEEEEe-CCCcEEEEEEeeccc-chhhhhHHHHHHH-HHhcCCCeeeeEEeeeecCCceEEE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQC-GRAFKSFDIECEI-MKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
..++|++.+.||+|+||.||+|+. .+|+.||||+++... ......+..|..+ ++.++||||+++++++...+..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 446788999999999999999986 478999999997542 2334455556665 7778999999999999999999999
Q ss_pred EEccCCCChhhhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcccc
Q 041689 500 LEHMPHGSLEKCLYS---SNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 576 (652)
|||+++ +|.+++.. ....+++..+..++.|++.||+|||++. ||+||||||+||+++.++.+||+|||+++...
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 999986 99888764 3447999999999999999999999632 89999999999999999999999999998652
Q ss_pred CCCCccccccccCCccccCccccc----cCccCcccchhhHHHHHHHHHhCCCCcch-----------------------
Q 041689 577 GEDQSMTQTQTLATIGYIAPEYGR----EGRVFANGDVYSFGIMLMEIHSAKQQCVS----------------------- 629 (652)
Q Consensus 577 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDvwslG~vl~elltg~~p~~~----------------------- 629 (652)
.........||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 206 ---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (340)
T 3an0_A 206 ---DSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADK 282 (340)
T ss_dssp ---CHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCGGG
T ss_pred ---cccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCCCccc
Confidence 112223357999999999964 34788999999999999999999998642
Q ss_pred ---hhhhhhcccchhhhccccCccCC
Q 041689 630 ---FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ---~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||..||++|||++||
T Consensus 283 ~~~~~~~li~~~l~~dp~~Rps~~el 308 (340)
T 3an0_A 283 FSAEFVDFTSQCLKKNSKERPTYPEL 308 (340)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHH
Confidence 37889999999999999999874
No 244
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.8e-39 Score=333.16 Aligned_cols=224 Identities=23% Similarity=0.263 Sum_probs=193.4
Q ss_pred HHHhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccc------hhhhhHHHHHHHHHhcC--CCeeeeEEeeee
Q 041689 421 CRATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCG------RAFKSFDIECEIMKSIH--YRNLVKIISSCS 491 (652)
Q Consensus 421 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--h~niv~~~~~~~ 491 (652)
.....+|++.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|+.++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 344578999999999999999999864 689999999975532 12356778999999996 599999999999
Q ss_pred cCCceEEEEEccCC-CChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeC-CCCcEEEecc
Q 041689 492 NEEFKELVLEHMPH-GSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLD-DTMVAHLSDF 569 (652)
Q Consensus 492 ~~~~~~lv~e~~~~-g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~-~~~~~kl~Df 569 (652)
..+..++||||+.+ ++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++ +++.+||+||
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCC
T ss_pred cCCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 99999999999986 89999987654 689999999999999999999999 999999999999999 7899999999
Q ss_pred cCCccccCCCCccccccccCCccccCccccccCcc-CcccchhhHHHHHHHHHhCCCCcc-----------------hhh
Q 041689 570 GITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRV-FANGDVYSFGIMLMEIHSAKQQCV-----------------SFV 631 (652)
Q Consensus 570 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~p~~-----------------~~l 631 (652)
|+++.... .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||. ..+
T Consensus 195 g~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 270 (320)
T 3a99_A 195 GSGALLKD----TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSEC 270 (320)
T ss_dssp TTCEECCS----SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSSCCCHHH
T ss_pred cccccccc----ccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcccccccccCCHHH
Confidence 99986532 22234568999999999887766 678899999999999999999964 348
Q ss_pred hhhhcccchhhhccccCccCC
Q 041689 632 FNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 632 ~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+++.+||+.||++|||++||
T Consensus 271 ~~li~~~l~~dp~~Rps~~~l 291 (320)
T 3a99_A 271 QHLIRWCLALRPSDRPTFEEI 291 (320)
T ss_dssp HHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHccCChhhCcCHHHH
Confidence 899999999999999999874
No 245
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.1e-38 Score=337.05 Aligned_cols=198 Identities=23% Similarity=0.294 Sum_probs=169.5
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcC-CC-----eeeeEEeeeecCCc
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH-YR-----NLVKIISSCSNEEF 495 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~~ 495 (652)
..++|++.+.||+|+||.||+|+.. +++.||||+++.. ......+..|+++++.++ |+ +|+++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 4578999999999999999999865 6889999999754 234566788999988885 44 49999999999999
Q ss_pred eEEEEEccCCCChhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeC--CCCcEEEecccCC
Q 041689 496 KELVLEHMPHGSLEKCLYSSN-CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLD--DTMVAHLSDFGIT 572 (652)
Q Consensus 496 ~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~--~~~~~kl~Dfg~~ 572 (652)
.++||||+++ +|.+++.... ..+++..+..++.|++.||.|||.+ ..||+||||||+||+++ .++.+||+|||++
T Consensus 131 ~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 9999999965 9999887654 3689999999999999999999952 22999999999999994 5788999999999
Q ss_pred ccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc
Q 041689 573 KLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV 628 (652)
Q Consensus 573 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~ 628 (652)
+.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 209 ~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~ 259 (382)
T 2vx3_A 209 CQLGQ-----RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259 (382)
T ss_dssp EETTC-----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eeccc-----ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 86522 2234578999999999999999999999999999999999999975
No 246
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-37 Score=329.84 Aligned_cols=309 Identities=19% Similarity=0.183 Sum_probs=261.7
Q ss_pred eeeceeEeccCCCcCCccCCCCC--CCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCC
Q 041689 4 ISIGKLELNVDDIESPCEIPSEI--NPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSST 81 (652)
Q Consensus 4 ~~l~~l~l~~~~~~~~~~ip~~~--~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~ 81 (652)
.+++.|+++.|.+. ++|..+ ++++|++|+|++|+|+++.+..|..+++|++|+|++|++++.++.
T Consensus 45 ~~l~~l~l~~~~l~---~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~---------- 111 (390)
T 3o6n_A 45 NNQKIVTFKNSTMR---KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH---------- 111 (390)
T ss_dssp CCCSEEEEESCEES---EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT----------
T ss_pred CCceEEEecCCchh---hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHH----------
Confidence 46778888888776 577754 678899999999999888888899999999999999988866553
Q ss_pred CCcccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCC
Q 041689 82 PELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIP 161 (652)
Q Consensus 82 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 161 (652)
.|.++++|++|+|++|+++.+++. .+..+++ |++|++++|++++..+..|..+++|++|+|++|++++.
T Consensus 112 -------~~~~l~~L~~L~L~~n~l~~l~~~-~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-- 180 (390)
T 3o6n_A 112 -------VFQNVPLLTVLVLERNDLSSLPRG-IFHNTPK-LTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-- 180 (390)
T ss_dssp -------TTTTCTTCCEEECCSSCCCCCCTT-TTTTCTT-CCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC--
T ss_pred -------HhcCCCCCCEEECCCCccCcCCHH-HhcCCCC-CcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc--
Confidence 477888999999999999877665 5677776 99999999999888888899999999999999998854
Q ss_pred ccccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccc
Q 041689 162 FTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLI 241 (652)
Q Consensus 162 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~ 241 (652)
.+..+++|+.|++++|.+++ +....+|+.|++++|.++..... ..++|+.|++++|....+..+..+++|+
T Consensus 181 -~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~~~l~~l~~L~ 251 (390)
T 3o6n_A 181 -DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDTAWLLNYPGLV 251 (390)
T ss_dssp -CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCCGGGGGCTTCS
T ss_pred -ccccccccceeecccccccc-----cCCCCcceEEECCCCeeeecccc---ccccccEEECCCCCCcccHHHcCCCCcc
Confidence 35677888999999998884 23445899999999999866433 2478999999999855567899999999
Q ss_pred eEecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCc
Q 041689 242 GIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNK 321 (652)
Q Consensus 242 ~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 321 (652)
.|++++|.+++..|..|..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+
T Consensus 252 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~ 329 (390)
T 3o6n_A 252 EVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNS 329 (390)
T ss_dssp EEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC-EEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSC
T ss_pred EEECCCCcCCCcChhHccccccCCEEECCCCcCc-ccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCc
Confidence 9999999999988999999999999999999999 46777889999999999999998 567778889999999999999
Q ss_pred CcccCCCCCCCCCcccccccCCccCCCC
Q 041689 322 LEGEIPKGGSFGNFSAESFEGNKLLCGS 349 (652)
Q Consensus 322 l~~~~p~~~~~~~l~~~~~~~N~~~c~~ 349 (652)
++... ...+..++.+++++|++.|..
T Consensus 330 i~~~~--~~~~~~L~~L~l~~N~~~~~~ 355 (390)
T 3o6n_A 330 IVTLK--LSTHHTLKNLTLSHNDWDCNS 355 (390)
T ss_dssp CCCCC--CCTTCCCSEEECCSSCEEHHH
T ss_pred cceeC--chhhccCCEEEcCCCCccchh
Confidence 98664 567889999999999999853
No 247
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.7e-38 Score=343.20 Aligned_cols=223 Identities=18% Similarity=0.224 Sum_probs=192.5
Q ss_pred hcCCCccceeccccceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHHhcCC-CeeeeEEeeeecCCceEEEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRI-GDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHY-RNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e 501 (652)
.++|.+.+.||+|+||.||+|++ .+++.||||++.... ....+..|+++++.++| ++|+.+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46899999999999999999986 468999999887543 23568899999999976 556666667778888999999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee---CCCCcEEEecccCCccccCC
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL---DDTMVAHLSDFGITKLLIGE 578 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~ 578 (652)
|+ +++|.+++......+++.++..|+.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 8899999986666799999999999999999999999 99999999999999 68899999999999876433
Q ss_pred CCcc-----ccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch------------------------
Q 041689 579 DQSM-----TQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS------------------------ 629 (652)
Q Consensus 579 ~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~------------------------ 629 (652)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEA 239 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHH
Confidence 2211 12255699999999999999999999999999999999999999743
Q ss_pred -------hhhhhhcccchhhhccccCccCC
Q 041689 630 -------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 -------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++||++++|
T Consensus 240 l~~~~p~~l~~li~~cl~~dP~~RPs~~el 269 (483)
T 3sv0_A 240 LCRGYPTEFASYFHYCRSLRFDDKPDYSYL 269 (483)
T ss_dssp HHTTSCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred HhcCCcHHHHHHHHHHhcCChhhCcCHHHH
Confidence 37889999999999999998764
No 248
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=9.2e-39 Score=324.12 Aligned_cols=222 Identities=25% Similarity=0.319 Sum_probs=192.0
Q ss_pred HhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3467999999999999999999875 68999999997542 23456788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCC---CcEEEecccCCcccc
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDT---MVAHLSDFGITKLLI 576 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~---~~~kl~Dfg~~~~~~ 576 (652)
|||+++++|.+++.... .+++.++..++.|++.||+|||++ ||+||||||+||+++.+ +.+||+|||++....
T Consensus 100 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999999887654 689999999999999999999999 99999999999999754 479999999998653
Q ss_pred CCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc---------------------------h
Q 041689 577 GEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV---------------------------S 629 (652)
Q Consensus 577 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~---------------------------~ 629 (652)
.. .......+++.|+|||++.+ .++.++||||||+++|+|++|+.||. .
T Consensus 176 ~~---~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (287)
T 2wei_A 176 QN---TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISD 251 (287)
T ss_dssp CC---SSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCH
T ss_pred CC---CccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCH
Confidence 22 12223458899999998765 58999999999999999999999853 2
Q ss_pred hhhhhhcccchhhhccccCccCC
Q 041689 630 FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++|+
T Consensus 252 ~~~~li~~~l~~dp~~Rps~~el 274 (287)
T 2wei_A 252 DAKDLIRKMLTFHPSLRITATQC 274 (287)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHHHcccChhhCcCHHHH
Confidence 36789999999999999999864
No 249
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.1e-39 Score=359.62 Aligned_cols=217 Identities=26% Similarity=0.360 Sum_probs=183.4
Q ss_pred ceeccccceEEEEEEe---CCCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEEEccCC
Q 041689 431 NLIGKGGFGTIYKSRI---GDGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVLEHMPH 505 (652)
Q Consensus 431 ~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 505 (652)
+.||+|+||.||+|.+ .+++.||||+++... ....+.+.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999964 246789999997643 2345789999999999999999999999965 458899999999
Q ss_pred CChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCc-ccc
Q 041689 506 GSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQS-MTQ 584 (652)
Q Consensus 506 g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~~ 584 (652)
|+|.+++.... .+++.++..|+.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.+...... ...
T Consensus 454 g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 99999997654 689999999999999999999999 9999999999999999999999999999876432221 122
Q ss_pred ccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcch------------------------hhhhhhcccc
Q 041689 585 TQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCVS------------------------FVFNLAMECT 639 (652)
Q Consensus 585 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~------------------------~l~~l~~~~l 639 (652)
....+|+.|+|||++.+..++.++|||||||++|||++ |+.||.. .+.+++.+||
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl 609 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCW 609 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence 33446789999999999999999999999999999998 9998643 3788999999
Q ss_pred hhhhccccCccCC
Q 041689 640 IESLELRINAKEI 652 (652)
Q Consensus 640 ~~~p~~Rpt~~ei 652 (652)
+.||++|||++||
T Consensus 610 ~~dP~~RPs~~~l 622 (635)
T 4fl3_A 610 TYDVENRPGFAAV 622 (635)
T ss_dssp CSSTTTSCCHHHH
T ss_pred CCCHhHCcCHHHH
Confidence 9999999999864
No 250
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.1e-37 Score=352.68 Aligned_cols=344 Identities=23% Similarity=0.206 Sum_probs=246.3
Q ss_pred eeeceeEeccCCCcCCccCCCCC-CC--CCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccc-----
Q 041689 4 ISIGKLELNVDDIESPCEIPSEI-NP--HNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADN----- 75 (652)
Q Consensus 4 ~~l~~l~l~~~~~~~~~~ip~~~-~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~----- 75 (652)
++|+.|+|+.|.+.. ..|..+ ++ ++|++|+|++|+++++.|..|..+++|++|+|++|++++..+.....
T Consensus 222 ~~L~~L~L~~n~l~~--~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 299 (680)
T 1ziw_A 222 TSIRNLSLSNSQLST--TSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVR 299 (680)
T ss_dssp SCCCEEECTTSCCCE--ECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCC
T ss_pred ccccEEEccCCcccc--cChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCcc
Confidence 567888888887763 345555 44 34888899888888888888888888888888888888766543211
Q ss_pred --cccCCCC---------CcccccccCCCCCCcEEEcccCCCcccCCccchhcccc------------------------
Q 041689 76 --YLTSSTP---------ELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSH------------------------ 120 (652)
Q Consensus 76 --~l~~~~~---------~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~------------------------ 120 (652)
.+..... .......|..+++|++|++++|+++++.+. .+..+++
T Consensus 300 ~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~ 378 (680)
T 1ziw_A 300 YLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSN-MFTGLINLKYLSLSNSFTSLRTLTNETFVSL 378 (680)
T ss_dssp EEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTT-TTTTCTTCCEEECTTCBSCCCEECTTTTGGG
T ss_pred EEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChh-HhccccCCcEEECCCCchhhhhcchhhhccc
Confidence 1111000 000001466677777777777777766554 4444433
Q ss_pred ---cCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCC-ccccCCCCCcEEecccCccccccCccccCCCCCcE
Q 041689 121 ---SLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIP-FTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYK 196 (652)
Q Consensus 121 ---~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 196 (652)
+|+.|++++|+++++.|.+|..+++|+.|+|++|++++.+| ..|.++++|++|++++|++++..+..|..+++|+.
T Consensus 379 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~ 458 (680)
T 1ziw_A 379 AHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQR 458 (680)
T ss_dssp TTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCE
T ss_pred ccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCccccc
Confidence 25555566666666667777777777777777777765443 56777777777777777777777777777777777
Q ss_pred EEccCCccc--ccccccCCCCCCCCEEEccCCC-CCC-CcccCCCCccceEecccccCCccCc--------ccccCCCCC
Q 041689 197 LDLGGNKLS--GSILTCFSNLASLRTLSLSYND-GPL-PLEIGNLKVLIGIDFSMNNFSSVIP--------TTIGSLKDL 264 (652)
Q Consensus 197 L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~-~~~-~~~~~~l~~L~~L~ls~N~l~~~~~--------~~~~~l~~L 264 (652)
|++++|.++ +..|..|..+++|++|+|++|. ..+ +..+.++++|+.|++++|+++++.+ ..|.++++|
T Consensus 459 L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L 538 (680)
T 1ziw_A 459 LMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHL 538 (680)
T ss_dssp EECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTC
T ss_pred chhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCC
Confidence 777777776 4567778888888888888886 333 3447788888888888888876422 236778888
Q ss_pred cEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCCC-C-CCCCcccccccC
Q 041689 265 QYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKG-G-SFGNFSAESFEG 342 (652)
Q Consensus 265 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~-~~~~l~~~~~~~ 342 (652)
++|+|++|+++.+.+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++.+|.. . .+..++.+++++
T Consensus 539 ~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~ 618 (680)
T 1ziw_A 539 HILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRF 618 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTT
T ss_pred CEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccC
Confidence 88888888888555567888888888888888888777777888888889999988888776643 2 467888999999
Q ss_pred CccCCCCC
Q 041689 343 NKLLCGSP 350 (652)
Q Consensus 343 N~~~c~~~ 350 (652)
|||.|..+
T Consensus 619 N~~~c~c~ 626 (680)
T 1ziw_A 619 NPFDCTCE 626 (680)
T ss_dssp CCCCBCCC
T ss_pred CCcccCCc
Confidence 99999765
No 251
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=330.98 Aligned_cols=226 Identities=24% Similarity=0.297 Sum_probs=185.0
Q ss_pred HHHHHhcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccc------hhhhhHHHHHHHHHhc----CCCeeeeEE
Q 041689 419 EVCRATYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCG------RAFKSFDIECEIMKSI----HYRNLVKII 487 (652)
Q Consensus 419 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~~~ 487 (652)
+.....++|++.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|+.+++++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 33445678999999999999999999864 688999999965422 2234566799999998 899999999
Q ss_pred eeeecCCceEEEEEc-cCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeC-CCCcEE
Q 041689 488 SSCSNEEFKELVLEH-MPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLD-DTMVAH 565 (652)
Q Consensus 488 ~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~-~~~~~k 565 (652)
+++...+..++|||| +++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++ +++.+|
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEE
Confidence 999999999999999 78999999998754 689999999999999999999999 999999999999999 889999
Q ss_pred EecccCCccccCCCCccccccccCCccccCccccccCccC-cccchhhHHHHHHHHHhCCCCcc----------------
Q 041689 566 LSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVF-ANGDVYSFGIMLMEIHSAKQQCV---------------- 628 (652)
Q Consensus 566 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslG~vl~elltg~~p~~---------------- 628 (652)
|+|||+++..... ......|+..|+|||++.+..+. .++||||+||++|||++|+.||.
T Consensus 181 l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 256 (312)
T 2iwi_A 181 LIDFGSGALLHDE----PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHV 256 (312)
T ss_dssp ECCCSSCEECCSS----CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHTCCCCCTTS
T ss_pred EEEcchhhhcccC----cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhhccCCcccC
Confidence 9999999875321 23345689999999998777664 58999999999999999999964
Q ss_pred -hhhhhhhcccchhhhccccCccCC
Q 041689 629 -SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 -~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||+.||++|||++|+
T Consensus 257 ~~~~~~li~~~l~~~p~~Rps~~e~ 281 (312)
T 2iwi_A 257 SPDCCALIRRCLAPKPSSRPSLEEI 281 (312)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CHHHHHHHHHHccCChhhCcCHHHH
Confidence 347899999999999999999874
No 252
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.6e-38 Score=332.49 Aligned_cols=219 Identities=22% Similarity=0.256 Sum_probs=188.4
Q ss_pred hcCCCccceeccccceEEEEEEeC-CC-cEEEEEEeecccchhhhhHHHHHHHHHhcCCCe------eeeEEeeeecCCc
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DG-MEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRN------LVKIISSCSNEEF 495 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~ 495 (652)
.++|++.+.||+|+||.||+|+.. ++ +.||+|+++.. ....+.+.+|++++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 367999999999999999999864 34 68999999754 344567888999999998766 9999999999999
Q ss_pred eEEEEEccCCCChhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeee----------------
Q 041689 496 KELVLEHMPHGSLEKCLYSSN-CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLL---------------- 558 (652)
Q Consensus 496 ~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll---------------- 558 (652)
.++||||+ ++++.+++.... ..+++.++..++.|++.||+|||++ ||+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 556766665543 4689999999999999999999999 99999999999999
Q ss_pred ---CCCCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch------
Q 041689 559 ---DDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS------ 629 (652)
Q Consensus 559 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~------ 629 (652)
+.++.+||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 247 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHE-----HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH 247 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTS-----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred ccccCCCcEEEeecCccccccc-----cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 5678999999999986421 22345689999999999999999999999999999999999999743
Q ss_pred -------------------------------------------------------------hhhhhhcccchhhhccccC
Q 041689 630 -------------------------------------------------------------FVFNLAMECTIESLELRIN 648 (652)
Q Consensus 630 -------------------------------------------------------------~l~~l~~~~l~~~p~~Rpt 648 (652)
.+.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 327 (355)
T 2eu9_A 248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT 327 (355)
T ss_dssp HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcC
Confidence 3558999999999999999
Q ss_pred ccCC
Q 041689 649 AKEI 652 (652)
Q Consensus 649 ~~ei 652 (652)
++|+
T Consensus 328 ~~e~ 331 (355)
T 2eu9_A 328 LAEA 331 (355)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9874
No 253
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.3e-38 Score=330.50 Aligned_cols=218 Identities=19% Similarity=0.223 Sum_probs=166.7
Q ss_pred hcCCCccc-eeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEeeeec----CCceE
Q 041689 424 TYGFNENN-LIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISSCSN----EEFKE 497 (652)
Q Consensus 424 ~~~y~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~ 497 (652)
.++|.+.+ .||+|+||.||+|+.. +++.||||++.... ....+....++.++||||+++++++.. +...+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 45788854 6999999999999876 69999999996431 122223334566799999999999875 45589
Q ss_pred EEEEccCCCChhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCC---CCcEEEecccCCc
Q 041689 498 LVLEHMPHGSLEKCLYSSN-CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDD---TMVAHLSDFGITK 573 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~---~~~~kl~Dfg~~~ 573 (652)
+||||+++|+|.+++.... ..+++.++..++.|++.||+|||++ ||+||||||+||+++. ++.+||+|||+++
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999999998654 3689999999999999999999999 9999999999999975 4569999999998
Q ss_pred cccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCc--------------------------
Q 041689 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQC-------------------------- 627 (652)
Q Consensus 574 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~-------------------------- 627 (652)
.... .......+|+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 180 ~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (336)
T 3fhr_A 180 ETTQ----NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 255 (336)
T ss_dssp EC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTT
T ss_pred eccc----cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCch
Confidence 6521 2223456899999999998889999999999999999999999996
Q ss_pred -----chhhhhhhcccchhhhccccCccCC
Q 041689 628 -----VSFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 628 -----~~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+..+.+++.+||+.||++|||++|+
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 285 (336)
T 3fhr_A 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQF 285 (336)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred hhccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 2347889999999999999999864
No 254
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=332.71 Aligned_cols=217 Identities=20% Similarity=0.243 Sum_probs=185.2
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCc-----
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEF----- 495 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----- 495 (652)
..+|.+.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 357899999999999999999865 68999999996542 2345678899999999999999999999987654
Q ss_pred -eEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcc
Q 041689 496 -KELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL 574 (652)
Q Consensus 496 -~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~ 574 (652)
.++||||++ ++|.+++.. .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 588887643 489999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCccccccccCCccccCcccccc-CccCcccchhhHHHHHHHHHhCCCCcch------------------------
Q 041689 575 LIGEDQSMTQTQTLATIGYIAPEYGRE-GRVFANGDVYSFGIMLMEIHSAKQQCVS------------------------ 629 (652)
Q Consensus 575 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~------------------------ 629 (652)
... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 176 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 176 ADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp -------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred CCC-----CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 421 1234568999999999876 6789999999999999999999999742
Q ss_pred ------------------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ------------------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ------------------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||..||++|||++|+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~ 303 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQA 303 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHH
Confidence 36789999999999999999764
No 255
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=341.63 Aligned_cols=223 Identities=23% Similarity=0.326 Sum_probs=181.4
Q ss_pred HhcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCceEEEEE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 501 (652)
...+|...+.||+|+||.||.....+++.||||++.... ...+.+|+++++++ +||||+++++++.+.+..|+|||
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 445688899999999999765556689999999996542 23457899999999 79999999999999999999999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCC-----CCcEEEecccCCcccc
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDD-----TMVAHLSDFGITKLLI 576 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~-----~~~~kl~Dfg~~~~~~ 576 (652)
|++ |+|.+++........+.++..++.|++.||+|||++ +|+||||||+||+++. ...+||+|||+++...
T Consensus 99 ~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 996 599999987765566666788999999999999999 9999999999999953 3368899999998764
Q ss_pred CCCCc-cccccccCCccccCccccc---cCccCcccchhhHHHHHHHHHh-CCCCcchh---------------------
Q 041689 577 GEDQS-MTQTQTLATIGYIAPEYGR---EGRVFANGDVYSFGIMLMEIHS-AKQQCVSF--------------------- 630 (652)
Q Consensus 577 ~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~ellt-g~~p~~~~--------------------- 630 (652)
..... .......||+.|+|||++. ...++.++||||+||++|||++ |+.||...
T Consensus 175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 254 (432)
T 3p23_A 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEK 254 (432)
T ss_dssp -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTC
T ss_pred CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccc
Confidence 32211 2234456999999999987 4567889999999999999999 88886432
Q ss_pred -----hhhhhcccchhhhccccCccCC
Q 041689 631 -----VFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 631 -----l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+.+++.+||+.||++|||++||
T Consensus 255 ~~~~~~~~li~~~L~~dP~~Rps~~ev 281 (432)
T 3p23_A 255 HEDVIARELIEKMIAMDPQKRPSAKHV 281 (432)
T ss_dssp HHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred cccHHHHHHHHHHHhCCHhhCCCHHHH
Confidence 5789999999999999999864
No 256
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=4.7e-39 Score=331.47 Aligned_cols=227 Identities=21% Similarity=0.305 Sum_probs=189.5
Q ss_pred HHHHhcCCCccceeccccceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceE
Q 041689 420 VCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKE 497 (652)
Q Consensus 420 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 497 (652)
.....++|++.+.||+|+||.||+|+... .||+|+++... ....+.+.+|+.++++++||||+++++++...+..+
T Consensus 28 ~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 105 (319)
T 2y4i_B 28 WDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105 (319)
T ss_dssp SSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEE
T ss_pred ccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceE
Confidence 33446789999999999999999998753 59999987542 233456788999999999999999999999999999
Q ss_pred EEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccC
Q 041689 498 LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 577 (652)
+||||+++++|.+++......+++.++..++.|++.||+|||++ ||+||||||+||+++ ++.+||+|||+++....
T Consensus 106 iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp EECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred EEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 99999999999999987766789999999999999999999999 999999999999998 67999999999875421
Q ss_pred CC---CccccccccCCccccCcccccc---------CccCcccchhhHHHHHHHHHhCCCCcc-----------------
Q 041689 578 ED---QSMTQTQTLATIGYIAPEYGRE---------GRVFANGDVYSFGIMLMEIHSAKQQCV----------------- 628 (652)
Q Consensus 578 ~~---~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDvwslG~vl~elltg~~p~~----------------- 628 (652)
.. .........|++.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 261 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKP 261 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCC
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCC
Confidence 11 1122233458999999998864 457889999999999999999999854
Q ss_pred --------hhhhhhhcccchhhhccccCccCC
Q 041689 629 --------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 --------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||..||++|||++||
T Consensus 262 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l 293 (319)
T 2y4i_B 262 NLSQIGMGKEISDILLFCWAFEQEERPTFTKL 293 (319)
T ss_dssp CCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHH
T ss_pred CCCcCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 347899999999999999999764
No 257
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.3e-37 Score=348.23 Aligned_cols=293 Identities=18% Similarity=0.233 Sum_probs=202.5
Q ss_pred CCccccCCCCCCEEEcCCCcCee------------------ccCCCc--------cccccCCCCCcccccccCCCCCCcE
Q 041689 45 VPAAIFDVSTLKDLALQDNYLSG------------------SLSSIA--------DNYLTSSTPELSFLSSLSNCKSLVV 98 (652)
Q Consensus 45 ~p~~~~~l~~L~~L~Ls~N~l~~------------------~~~~~~--------~~~l~~~~~~~~~~~~l~~l~~L~~ 98 (652)
+|..|+++++|++|+|++|+|++ +++.+. ...+..+......+..|.++++|++
T Consensus 198 ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 277 (636)
T 4eco_A 198 VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQL 277 (636)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCE
T ss_pred CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCE
Confidence 56667777777777777777776 333322 1112222111222346777888888
Q ss_pred EEcccCC-Ccc-cCCccchhcc------cccCcEEEccCCcccccCCc--cccCCCCCCEEEecCccccccCCccccCCC
Q 041689 99 FLLSNNP-LNG-ILPRMSIGNL------SHSLEIFDMSKCNVSGGIPE--EIGNLTNLTAIYLGGNKLNGSIPFTLRELQ 168 (652)
Q Consensus 99 L~Ls~N~-l~~-~~~~~~~~~l------~~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 168 (652)
|+|++|+ +++ ..|. .++.+ ++ |++|+|++|+++ .+|. .|.++++|++|+|++|+++|.+| .|..++
T Consensus 278 L~Ls~n~~l~~~~lp~-~~~~L~~~~~l~~-L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~ 353 (636)
T 4eco_A 278 INVACNRGISGEQLKD-DWQALADAPVGEK-IQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEI 353 (636)
T ss_dssp EECTTCTTSCHHHHHH-HHHHHHHSGGGGT-CCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEE
T ss_pred EECcCCCCCccccchH-HHHhhhccccCCC-CCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCC
Confidence 8888887 776 4444 45555 54 888888888887 5666 78888888888888888887777 777888
Q ss_pred CCcEEecccCccccccCccccCCCC-CcEEEccCCcccccccccCCCCC--CCCEEEccCCC--CCCCcccC-------C
Q 041689 169 KLQYVGLKDNKLEGTIPYDIFRLVK-LYKLDLGGNKLSGSILTCFSNLA--SLRTLSLSYND--GPLPLEIG-------N 236 (652)
Q Consensus 169 ~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~Ls~N~--~~~~~~~~-------~ 236 (652)
+|++|+|++|+++ .+|..+..+++ |++|++++|+++ .+|..+..++ +|++|++++|. +..|..+. .
T Consensus 354 ~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~ 431 (636)
T 4eco_A 354 KLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFK 431 (636)
T ss_dssp EESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCC
T ss_pred CCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhccccccccc
Confidence 8888888888887 77777777877 888888888887 5566666544 78888888875 45566666 6
Q ss_pred CCccceEecccccCCccCcccccCCCCCcEEEccCCcCCCccccccccc-------ccCcceeccccccCCCCchhhc--
Q 041689 237 LKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDL-------ISLKSLNFSNNNLSGAIPLLLE-- 307 (652)
Q Consensus 237 l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-------~~L~~L~L~~N~l~~~~~~~~~-- 307 (652)
+++|+.|++++|+++++++..+..+++|++|+|++|+++...+..+... ++|+.|+|++|+|+ .+|..+.
T Consensus 432 ~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~ 510 (636)
T 4eco_A 432 GINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRAT 510 (636)
T ss_dssp CCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTT
T ss_pred CCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhc
Confidence 6778888888888876555556667888888888888873333333322 27888888888887 5666665
Q ss_pred CCCCCceEEeecCcCcccCCCCCCCCCcccccccCCc
Q 041689 308 KLSYLEHLNLSFNKLEGEIPKGGSFGNFSAESFEGNK 344 (652)
Q Consensus 308 ~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~~~~~~N~ 344 (652)
.+++|+.|+|++|++++.++....+..++.+++++|+
T Consensus 511 ~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~ 547 (636)
T 4eco_A 511 TLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQR 547 (636)
T ss_dssp TCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCB
T ss_pred cCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCc
Confidence 7788888888888887744445667777777776655
No 258
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.3e-38 Score=355.74 Aligned_cols=225 Identities=22% Similarity=0.310 Sum_probs=190.3
Q ss_pred HhcCCCccceeccccceEEEEEEeCC----CcEEEEEEeecc-cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceE
Q 041689 423 ATYGFNENNLIGKGGFGTIYKSRIGD----GMEVAVKVFHLQ-CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKE 497 (652)
Q Consensus 423 ~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 497 (652)
..++|.+.+.||+|+||.||+|.+.. +..||+|+++.. .....+.+.+|+.++++++||||+++++++. ++..+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence 34678889999999999999998642 457999998654 2334567899999999999999999999985 45689
Q ss_pred EEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccC
Q 041689 498 LVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIG 577 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 577 (652)
+||||+++|+|.+++......+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 99999999999999987766799999999999999999999999 999999999999999999999999999986532
Q ss_pred CCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHh-CCCCcc------------------------hhhh
Q 041689 578 EDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHS-AKQQCV------------------------SFVF 632 (652)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~------------------------~~l~ 632 (652)
.. ........+|+.|+|||++.+..++.++|||||||++|||++ |..||. ..+.
T Consensus 544 ~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~ 622 (656)
T 2j0j_A 544 ST-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 622 (656)
T ss_dssp -----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHHHH
T ss_pred Cc-ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHH
Confidence 21 122233457789999999998899999999999999999997 888864 3478
Q ss_pred hhhcccchhhhccccCccCC
Q 041689 633 NLAMECTIESLELRINAKEI 652 (652)
Q Consensus 633 ~l~~~~l~~~p~~Rpt~~ei 652 (652)
+++.+||..||++|||+.||
T Consensus 623 ~li~~~l~~dP~~RPs~~el 642 (656)
T 2j0j_A 623 SLMTKCWAYDPSRRPRFTEL 642 (656)
T ss_dssp HHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHcCCChhHCcCHHHH
Confidence 99999999999999999874
No 259
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.9e-37 Score=349.86 Aligned_cols=334 Identities=17% Similarity=0.198 Sum_probs=264.4
Q ss_pred eeeceeEeccCCCcCC---------------ccCCCCC---CCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCc-
Q 041689 4 ISIGKLELNVDDIESP---------------CEIPSEI---NPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNY- 64 (652)
Q Consensus 4 ~~l~~l~l~~~~~~~~---------------~~ip~~~---~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~- 64 (652)
++|+.|+|+.|.+..- +.+|..+ ++++|++|+|++|++.+.+|..|.++++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ 527 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRG 527 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCC
Confidence 4689999999998730 0289887 58999999999999999999999999999999999998
Q ss_pred Cee-ccC--------------CCccccccCCCCCccccc--ccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEc
Q 041689 65 LSG-SLS--------------SIADNYLTSSTPELSFLS--SLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDM 127 (652)
Q Consensus 65 l~~-~~~--------------~~~~~~l~~~~~~~~~~~--~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L 127 (652)
+++ ..| .+....+..+... ..+. .|.++++|+.|+|++|+++.++ .++.+++ |+.|+|
T Consensus 528 lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~lp---~~~~L~~-L~~L~L 602 (876)
T 4ecn_A 528 ISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRHLE---AFGTNVK-LTDLKL 602 (876)
T ss_dssp SCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCBCC---CCCTTSE-ESEEEC
T ss_pred cccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcccch---hhcCCCc-ceEEEC
Confidence 886 232 3333444444443 3334 5788888888888888888443 4667776 888888
Q ss_pred cCCcccccCCccccCCCC-CCEEEecCccccccCCccccCCCC--CcEEecccCccccccCccc---c--CCCCCcEEEc
Q 041689 128 SKCNVSGGIPEEIGNLTN-LTAIYLGGNKLNGSIPFTLRELQK--LQYVGLKDNKLEGTIPYDI---F--RLVKLYKLDL 199 (652)
Q Consensus 128 ~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~L~~N~l~~~~~~~~---~--~l~~L~~L~L 199 (652)
++|+++ .+|..+..+++ |+.|+|++|+|+ .+|..+..++. |+.|+|++|+|++.+|... . .+++|+.|+|
T Consensus 603 s~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~L 680 (876)
T 4ecn_A 603 DYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTL 680 (876)
T ss_dssp CSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEEC
T ss_pred cCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEc
Confidence 888888 67777888888 888888888888 66777776654 8888888888887665322 2 3457889999
Q ss_pred cCCcccccccccCCCCCCCCEEEccCCC-CCCCcccCC--------CCccceEecccccCCccCccccc--CCCCCcEEE
Q 041689 200 GGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEIGN--------LKVLIGIDFSMNNFSSVIPTTIG--SLKDLQYLF 268 (652)
Q Consensus 200 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~~~~~--------l~~L~~L~ls~N~l~~~~~~~~~--~l~~L~~L~ 268 (652)
++|+++.+++..+..+++|+.|+|++|. ..+|..+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+
T Consensus 681 s~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~ 759 (876)
T 4ecn_A 681 SYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMD 759 (876)
T ss_dssp CSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEE
T ss_pred cCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEE
Confidence 9999986666666788999999999996 556665443 338999999999999 4677776 899999999
Q ss_pred ccCCcCCCcccccccccccCcceeccc------cccCCCCchhhcCCCCCceEEeecCcCcccCCCCCCCCCcccccccC
Q 041689 269 LGYNILKGSIPDSVGDLISLKSLNFSN------NNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKGGSFGNFSAESFEG 342 (652)
Q Consensus 269 L~~N~l~~~~p~~~~~l~~L~~L~L~~------N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~~~~~~ 342 (652)
|++|+|++ +|..+..+++|+.|+|++ |++.+.+|..+..+++|+.|+|++|++ +.+|.. ..+.++.+++++
T Consensus 760 Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~-l~~~L~~LdLs~ 836 (876)
T 4ecn_A 760 VSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEK-LTPQLYILDIAD 836 (876)
T ss_dssp CCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCSSSCEEECCS
T ss_pred eCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHh-hcCCCCEEECCC
Confidence 99999996 788889999999999976 788889999999999999999999999 566654 336889999999
Q ss_pred CccCCC
Q 041689 343 NKLLCG 348 (652)
Q Consensus 343 N~~~c~ 348 (652)
|++..-
T Consensus 837 N~l~~i 842 (876)
T 4ecn_A 837 NPNISI 842 (876)
T ss_dssp CTTCEE
T ss_pred CCCCcc
Confidence 987553
No 260
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.4e-38 Score=333.57 Aligned_cols=196 Identities=17% Similarity=0.250 Sum_probs=167.6
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcC-----------CCeeeeEEeeee
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH-----------YRNLVKIISSCS 491 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~ 491 (652)
..+|.+.+.||+|+||.||+|+.. +++.||||++... ......+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 357999999999999999999864 6899999999754 234567888999999886 899999999987
Q ss_pred cCC----ceEEEEEccCCCChhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeC------C
Q 041689 492 NEE----FKELVLEHMPHGSLEKCLYSSN-CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLD------D 560 (652)
Q Consensus 492 ~~~----~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~------~ 560 (652)
..+ ..++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+++ ||+||||||+||+++ .
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcC
Confidence 654 789999999 889999987643 35899999999999999999999842 899999999999994 4
Q ss_pred CCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc
Q 041689 561 TMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV 628 (652)
Q Consensus 561 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~ 628 (652)
.+.+||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 174 ~~~~kl~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 236 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDE-----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 236 (373)
T ss_dssp EEEEEECCCTTCEETTB-----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-
T ss_pred cceEEEcccccccccCC-----CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 45899999999986532 2234568999999999999999999999999999999999999985
No 261
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.5e-38 Score=339.60 Aligned_cols=220 Identities=24% Similarity=0.288 Sum_probs=176.3
Q ss_pred CCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCceEEEEEccC
Q 041689 426 GFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEFKELVLEHMP 504 (652)
Q Consensus 426 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 504 (652)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+++..|+||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 35556889999999998777678999999998754 235678899999886 89999999999999999999999996
Q ss_pred CCChhhhhhcCCCC------CCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCC-------------CcEE
Q 041689 505 HGSLEKCLYSSNCI------LDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDT-------------MVAH 565 (652)
Q Consensus 505 ~g~L~~~l~~~~~~------l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~-------------~~~k 565 (652)
|+|.+++...... .++..+..++.|++.||+|||++ +|+||||||+||+++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 5999999765421 12234577999999999999999 99999999999999754 4899
Q ss_pred EecccCCccccCCCCcc--ccccccCCccccCcccccc-------CccCcccchhhHHHHHHHHHh-CCCCcch------
Q 041689 566 LSDFGITKLLIGEDQSM--TQTQTLATIGYIAPEYGRE-------GRVFANGDVYSFGIMLMEIHS-AKQQCVS------ 629 (652)
Q Consensus 566 l~Dfg~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~vl~ellt-g~~p~~~------ 629 (652)
|+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||..
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~ 248 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 248 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH
Confidence 99999998764322111 1234569999999999865 678999999999999999999 8998642
Q ss_pred ----------------------hhhhhhcccchhhhccccCccCC
Q 041689 630 ----------------------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ----------------------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 249 ~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei 293 (434)
T 2rio_A 249 NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293 (434)
T ss_dssp HHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHH
Confidence 36789999999999999999864
No 262
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=3e-38 Score=348.31 Aligned_cols=222 Identities=24% Similarity=0.289 Sum_probs=188.8
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeecc-cchhhhhHHHHHHHHHhcCCCeeeeEEeeeec------CCce
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQ-CGRAFKSFDIECEIMKSIHYRNLVKIISSCSN------EEFK 496 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~~ 496 (652)
++|++.+.||+|+||.||+|.+. +|+.||||+++.. .....+.+.+|++++++++||||+++++++.. ++..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 67999999999999999999864 6899999998754 33445678999999999999999999998765 6778
Q ss_pred EEEEEccCCCChhhhhhcCCC--CCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCc---EEEecccC
Q 041689 497 ELVLEHMPHGSLEKCLYSSNC--ILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMV---AHLSDFGI 571 (652)
Q Consensus 497 ~lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~---~kl~Dfg~ 571 (652)
++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++. +||+|||.
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 999999999999999976442 588889999999999999999999 9999999999999986664 99999999
Q ss_pred CccccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc-----------------------
Q 041689 572 TKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV----------------------- 628 (652)
Q Consensus 572 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~----------------------- 628 (652)
+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 171 a~~~~~~---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 171 AKELDQG---ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVY 247 (676)
T ss_dssp CCBTTSC---CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSC
T ss_pred ccccccc---cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhh
Confidence 9875322 22344578999999999999999999999999999999999999973
Q ss_pred ------------------------hhhhhhhcccchhhhccccCccCC
Q 041689 629 ------------------------SFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 629 ------------------------~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
..+.+++.+||..||++|||++|+
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 237889999999999999999874
No 263
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=6.5e-37 Score=342.49 Aligned_cols=308 Identities=19% Similarity=0.185 Sum_probs=256.4
Q ss_pred eeceeEeccCCCcCCccCCCCC--CCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCC
Q 041689 5 SIGKLELNVDDIESPCEIPSEI--NPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTP 82 (652)
Q Consensus 5 ~l~~l~l~~~~~~~~~~ip~~~--~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~ 82 (652)
+++.|+++.|.+. .+|..+ ++++|++|+|++|+|+++.|..|..+++|++|+|++|.|++.++.
T Consensus 52 ~l~~l~l~~~~l~---~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~----------- 117 (597)
T 3oja_B 52 NQKIVTFKNSTMR---KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH----------- 117 (597)
T ss_dssp CCSEEEESSCEES---EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT-----------
T ss_pred CceEEEeeCCCCC---CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHH-----------
Confidence 4667777777766 577654 678888888888888888778888888888888888888766553
Q ss_pred CcccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCc
Q 041689 83 ELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPF 162 (652)
Q Consensus 83 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 162 (652)
.|.++++|++|+|++|.|+++++. .|+.+++ |++|+|++|.|++..|..|.++++|++|+|++|.+++..
T Consensus 118 ------~~~~l~~L~~L~L~~n~l~~l~~~-~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-- 187 (597)
T 3oja_B 118 ------VFQNVPLLTVLVLERNDLSSLPRG-IFHNTPK-LTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD-- 187 (597)
T ss_dssp ------TTTTCTTCCEEECCSSCCCCCCTT-TTTTCTT-CCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--
T ss_pred ------HHcCCCCCCEEEeeCCCCCCCCHH-HhccCCC-CCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--
Confidence 467888888888888888877765 5677776 888888888888888888888888888888888888543
Q ss_pred cccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccce
Q 041689 163 TLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIG 242 (652)
Q Consensus 163 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~ 242 (652)
+..+++|+.|++++|.+++ +....+|+.|++++|.++...+.. .++|+.|+|++|...-+..++.+++|+.
T Consensus 188 -~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~~~~l~~l~~L~~ 258 (597)
T 3oja_B 188 -LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTDTAWLLNYPGLVE 258 (597)
T ss_dssp -GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCCCGGGGGCTTCSE
T ss_pred -hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCCChhhccCCCCCE
Confidence 5567788888888888874 334568999999999998665443 3689999999998666788999999999
Q ss_pred EecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcC
Q 041689 243 IDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKL 322 (652)
Q Consensus 243 L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 322 (652)
|+|++|.+++..|..|..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|++
T Consensus 259 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l 336 (597)
T 3oja_B 259 VDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI 336 (597)
T ss_dssp EECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCC
T ss_pred EECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCC
Confidence 9999999999999999999999999999999995 6777888999999999999998 6777889999999999999999
Q ss_pred cccCCCCCCCCCcccccccCCccCCCC
Q 041689 323 EGEIPKGGSFGNFSAESFEGNKLLCGS 349 (652)
Q Consensus 323 ~~~~p~~~~~~~l~~~~~~~N~~~c~~ 349 (652)
++.. ...++.++.+++++|+|.|..
T Consensus 337 ~~~~--~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 337 VTLK--LSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp CCCC--CCTTCCCSEEECCSSCEEHHH
T ss_pred CCcC--hhhcCCCCEEEeeCCCCCChh
Confidence 8764 457789999999999999853
No 264
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5e-37 Score=340.69 Aligned_cols=339 Identities=21% Similarity=0.258 Sum_probs=208.7
Q ss_pred ceeeeceeEeccCCCcCCccCCCCC-CCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCC-------Cc
Q 041689 2 FSISIGKLELNVDDIESPCEIPSEI-NPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSS-------IA 73 (652)
Q Consensus 2 ~~~~l~~l~l~~~~~~~~~~ip~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-------~~ 73 (652)
++.+++.|+|+.|.++. ..|..+ ++++|++|+|++|+|+++.|+.|.++++|++|+|++|++++.++. +.
T Consensus 24 ~~~~L~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 101 (549)
T 2z81_A 24 LTAAMKSLDLSFNKITY--IGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLK 101 (549)
T ss_dssp CCTTCCEEECCSSCCCE--ECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCC
T ss_pred CCCCccEEECcCCccCc--cChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCc
Confidence 34689999999999873 345666 789999999999999998889999999999999999999876653 22
Q ss_pred cccccCCCCCc-ccccccCCCCCCcEEEcccCC-CcccCCccchhcccccCcEEEccCCcccccCCccccCC--------
Q 041689 74 DNYLTSSTPEL-SFLSSLSNCKSLVVFLLSNNP-LNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNL-------- 143 (652)
Q Consensus 74 ~~~l~~~~~~~-~~~~~l~~l~~L~~L~Ls~N~-l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l-------- 143 (652)
...+..+.... ..+..+.++++|++|++++|. +..+++. .+..+++ |++|++++|++++..|..+..+
T Consensus 102 ~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~-~~~~l~~-L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l 179 (549)
T 2z81_A 102 YLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRI-DFAGLTS-LNELEIKALSLRNYQSQSLKSIRDIHHLTL 179 (549)
T ss_dssp EEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTT-TTTTCCE-EEEEEEEETTCCEECTTTTTTCSEEEEEEE
T ss_pred EEECCCCcccccchhhhhhccCCccEEECCCCccccccCHh-hhhcccc-cCeeeccCCcccccChhhhhccccCceEec
Confidence 23333332221 223457788888888888887 4444443 6777776 8888888888887777776554
Q ss_pred ----------------CCCCEEEecCccccccC--Ccc-c----------------------------------------
Q 041689 144 ----------------TNLTAIYLGGNKLNGSI--PFT-L---------------------------------------- 164 (652)
Q Consensus 144 ----------------~~L~~L~L~~N~l~~~~--~~~-~---------------------------------------- 164 (652)
++|++|+|++|++++.. |.. .
T Consensus 180 ~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~ 259 (549)
T 2z81_A 180 HLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFD 259 (549)
T ss_dssp ECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEE
T ss_pred ccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccc
Confidence 45555555555554321 000 0
Q ss_pred -----------------------------------------------cCCCCCcEEecccCccccccCccc-cCCCCCcE
Q 041689 165 -----------------------------------------------RELQKLQYVGLKDNKLEGTIPYDI-FRLVKLYK 196 (652)
Q Consensus 165 -----------------------------------------------~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~ 196 (652)
...++|+.|++++|+++ .+|..+ ..+++|++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~ 338 (549)
T 2z81_A 260 DCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEF 338 (549)
T ss_dssp SCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCE
T ss_pred cccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccE
Confidence 00012223333333332 233333 24566666
Q ss_pred EEccCCccccccc---ccCCCCCCCCEEEccCCCC-CCC---cccCCCCccceEecccccCCccCcccccCCCCCcEEEc
Q 041689 197 LDLGGNKLSGSIL---TCFSNLASLRTLSLSYNDG-PLP---LEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFL 269 (652)
Q Consensus 197 L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~~-~~~---~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L 269 (652)
|+|++|++++..| ..++.+++|++|+|++|.. .++ ..+..+++|+.|++++|++++ +|..+..+++|++|+|
T Consensus 339 L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~~L~~L~L 417 (549)
T 2z81_A 339 LDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHP-MPDSCQWPEKMRFLNL 417 (549)
T ss_dssp EECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCC-CCSCCCCCTTCCEEEC
T ss_pred EEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCcc-CChhhcccccccEEEC
Confidence 6666666665442 2355566666666666642 222 235566666666666666663 4555555566666666
Q ss_pred cCCcCCCcccccc------------------cccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCC-CC
Q 041689 270 GYNILKGSIPDSV------------------GDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPK-GG 330 (652)
Q Consensus 270 ~~N~l~~~~p~~~------------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~ 330 (652)
++|++++ +|..+ ..+++|+.|+|++|+|+ .+|. ...+++|+.|+|++|++++.+|. ..
T Consensus 418 s~N~l~~-l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~ 494 (549)
T 2z81_A 418 SSTGIRV-VKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFD 494 (549)
T ss_dssp TTSCCSC-CCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGG
T ss_pred CCCCccc-ccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHh
Confidence 6665552 22211 25666777777777776 4444 34567777777777777766665 35
Q ss_pred CCCCcccccccCCccCCCC
Q 041689 331 SFGNFSAESFEGNKLLCGS 349 (652)
Q Consensus 331 ~~~~l~~~~~~~N~~~c~~ 349 (652)
.+..++.+++++|+|.|..
T Consensus 495 ~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 495 RLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp GCTTCCEEECCSSCBCCCH
T ss_pred cCcccCEEEecCCCccCCC
Confidence 6666777777777776643
No 265
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=5.9e-37 Score=346.04 Aligned_cols=165 Identities=24% Similarity=0.250 Sum_probs=136.7
Q ss_pred ccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC---CCCCcccCCCCccceEecccccCCccCcccccCCCCC
Q 041689 188 IFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND---GPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDL 264 (652)
Q Consensus 188 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~---~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L 264 (652)
|..+.+++.+++++|.+.+..+..+..+++|+.|+|++|. ...|..+..+++|+.|+|++|+|+++.|..|.++++|
T Consensus 441 ~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L 520 (635)
T 4g8a_A 441 FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 520 (635)
T ss_dssp TTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred cccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCC
Confidence 4455667777777888888888889999999999999995 3467889999999999999999999999999999999
Q ss_pred cEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCC-CCCceEEeecCcCcccCCCCCCCCCcc---cccc
Q 041689 265 QYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKL-SYLEHLNLSFNKLEGEIPKGGSFGNFS---AESF 340 (652)
Q Consensus 265 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~~~l~---~~~~ 340 (652)
++|+|++|+|++..|..|..+++|+.|||++|+|++..|..+..+ ++|+.|+|++|+|+|.+.-.....+++ ....
T Consensus 521 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~~wl~~~~~~~~ 600 (635)
T 4g8a_A 521 QVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLV 600 (635)
T ss_dssp CEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHHHHHHHTTTTBS
T ss_pred CEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHHHHHHhCCCccC
Confidence 999999999999889999999999999999999999999999988 689999999999999775321111111 1112
Q ss_pred cCCccCCCCCCC
Q 041689 341 EGNKLLCGSPNL 352 (652)
Q Consensus 341 ~~N~~~c~~~~~ 352 (652)
......|+.|..
T Consensus 601 ~~~~~~C~~P~~ 612 (635)
T 4g8a_A 601 EVERMECATPSD 612 (635)
T ss_dssp CGGGCBBCSSTT
T ss_pred CCCCceeCCchH
Confidence 234567887753
No 266
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=324.16 Aligned_cols=222 Identities=22% Similarity=0.279 Sum_probs=172.0
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeecccc--hhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCG--RAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
.++|+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.++..+++.++||||+++++++..++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 457888999999999999999975 689999999975532 22233445556788889999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHF-NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
||+ ++.+..+.......+++..+..++.|++.||.|||+ . ||+||||||+||+++.++.+||+|||++......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~- 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD- 178 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCC-
Confidence 999 556666655444578999999999999999999998 6 8999999999999999999999999999765321
Q ss_pred CccccccccCCccccCccccc-----cCccCcccchhhHHHHHHHHHhCCCCcch-------------------------
Q 041689 580 QSMTQTQTLATIGYIAPEYGR-----EGRVFANGDVYSFGIMLMEIHSAKQQCVS------------------------- 629 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~~------------------------- 629 (652)
.......+++.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 179 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (318)
T 2dyl_A 179 --KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGF 256 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCC
T ss_pred --ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCC
Confidence 2223456899999999984 45688999999999999999999998643
Q ss_pred --hhhhhhcccchhhhccccCccCC
Q 041689 630 --FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 --~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 257 ~~~l~~li~~~l~~dp~~Rps~~~l 281 (318)
T 2dyl_A 257 SGDFQSFVKDCLTKDHRKRPKYNKL 281 (318)
T ss_dssp CHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred CHHHHHHHHHHccCChhHCcCHHHH
Confidence 37889999999999999999864
No 267
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=8.5e-38 Score=323.26 Aligned_cols=223 Identities=25% Similarity=0.327 Sum_probs=169.6
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHH-HHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC-GRAFKSFDIECE-IMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
.++|...+.||+|+||.||+|... +|+.||||+++... ......+..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 367889999999999999999875 68999999997653 233345555665 677789999999999999999999999
Q ss_pred EccCCCChhhhhhc----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcccc
Q 041689 501 EHMPHGSLEKCLYS----SNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576 (652)
Q Consensus 501 e~~~~g~L~~~l~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 576 (652)
||+++ +|.+++.. ....+++..+..++.|++.||.|||+.. ||+||||||+||+++.++.+||+|||+++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99986 88777652 2346899999999999999999999842 89999999999999999999999999998653
Q ss_pred CCCCccccccccCCccccCcccc----ccCccCcccchhhHHHHHHHHHhCCCCcch-----------------------
Q 041689 577 GEDQSMTQTQTLATIGYIAPEYG----REGRVFANGDVYSFGIMLMEIHSAKQQCVS----------------------- 629 (652)
Q Consensus 577 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwslG~vl~elltg~~p~~~----------------------- 629 (652)
.. .......||+.|+|||++ .+..++.++|||||||++|||++|+.||..
T Consensus 178 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T 3aln_A 178 DS---IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSE 254 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCS
T ss_pred cc---cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcc
Confidence 21 222334689999999998 456789999999999999999999988643
Q ss_pred ------hhhhhhcccchhhhccccCccCC
Q 041689 630 ------FVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 630 ------~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
.+.+++.+||+.||++|||++||
T Consensus 255 ~~~~~~~l~~li~~~l~~dp~~Rps~~el 283 (327)
T 3aln_A 255 EREFSPSFINFVNLCLTKDESKRPKYKEL 283 (327)
T ss_dssp SCCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cccCCHHHHHHHHHHhhCChhhCcCHHHH
Confidence 36789999999999999999864
No 268
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.5e-36 Score=334.57 Aligned_cols=310 Identities=19% Similarity=0.161 Sum_probs=243.5
Q ss_pred ceeEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCccc
Q 041689 7 GKLELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSF 86 (652)
Q Consensus 7 ~~l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~ 86 (652)
+.+++++|.++ ++|..+ +++|++|+|++|+|+++.|..|.++++|++|+|++|+|+++.+.
T Consensus 34 ~~l~ls~~~L~---~ip~~~-~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~--------------- 94 (562)
T 3a79_B 34 SMVDYSNRNLT---HVPKDL-PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFH--------------- 94 (562)
T ss_dssp CEEECTTSCCC---SCCTTS-CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTT---------------
T ss_pred cEEEcCCCCCc---cCCCCC-CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHH---------------
Confidence 57888888887 588877 68999999999999988888999999999999999999877653
Q ss_pred ccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccC-CccccCCCCCCEEEecCccccccCCcccc
Q 041689 87 LSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGI-PEEIGNLTNLTAIYLGGNKLNGSIPFTLR 165 (652)
Q Consensus 87 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 165 (652)
.|.++++|++|+|++|+|+.++.. .+++ |++|+|++|+++++. |..|.++++|++|+|++|++++. .+.
T Consensus 95 --~~~~l~~L~~L~Ls~N~l~~lp~~----~l~~-L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~ 164 (562)
T 3a79_B 95 --VFLFNQDLEYLDVSHNRLQNISCC----PMAS-LRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLL 164 (562)
T ss_dssp --TTTTCTTCCEEECTTSCCCEECSC----CCTT-CSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTG
T ss_pred --HhCCCCCCCEEECCCCcCCccCcc----cccc-CCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chh
Confidence 577888899999999988876543 4555 888999999888743 57888888899999988888753 345
Q ss_pred CCCCC--cEEecccCcc--ccccCccccCCC-------------------------------------------------
Q 041689 166 ELQKL--QYVGLKDNKL--EGTIPYDIFRLV------------------------------------------------- 192 (652)
Q Consensus 166 ~l~~L--~~L~L~~N~l--~~~~~~~~~~l~------------------------------------------------- 192 (652)
.+++| ++|+|++|++ ++..|..+..+.
T Consensus 165 ~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~ 244 (562)
T 3a79_B 165 PVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSE 244 (562)
T ss_dssp GGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHH
T ss_pred hhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHH
Confidence 55555 8888888887 666665555433
Q ss_pred --------------------------------CCcEEEccCCcccccccccC----------------------------
Q 041689 193 --------------------------------KLYKLDLGGNKLSGSILTCF---------------------------- 212 (652)
Q Consensus 193 --------------------------------~L~~L~L~~N~l~~~~~~~~---------------------------- 212 (652)
+|++|++++|.+++.+|..+
T Consensus 245 l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~ 324 (562)
T 3a79_B 245 LTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEAL 324 (562)
T ss_dssp HHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHH
T ss_pred HhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhh
Confidence 56677777777776555544
Q ss_pred -------------------------CCCCCCCEEEccCCC--CCCCcccCCCCccceEecccccCCccC--cccccCCCC
Q 041689 213 -------------------------SNLASLRTLSLSYND--GPLPLEIGNLKVLIGIDFSMNNFSSVI--PTTIGSLKD 263 (652)
Q Consensus 213 -------------------------~~l~~L~~L~Ls~N~--~~~~~~~~~l~~L~~L~ls~N~l~~~~--~~~~~~l~~ 263 (652)
..+++|++|++++|. ...|..++++++|+.|++++|+++++. |..|.++++
T Consensus 325 ~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~ 404 (562)
T 3a79_B 325 YSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSS 404 (562)
T ss_dssp HHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTT
T ss_pred hhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCC
Confidence 677888888888886 446778888889999999999888743 466888889
Q ss_pred CcEEEccCCcCCCccc-ccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCCCCCCCCcccccccC
Q 041689 264 LQYLFLGYNILKGSIP-DSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKGGSFGNFSAESFEG 342 (652)
Q Consensus 264 L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~~~~~~ 342 (652)
|++|+|++|++++.+| ..+..+++|+.|+|++|++++..|..+. ++|+.|+|++|+++..++....+..++.+++++
T Consensus 405 L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~ 482 (562)
T 3a79_B 405 LETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVAS 482 (562)
T ss_dssp CCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCS
T ss_pred CCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCC
Confidence 9999999999887344 4578888899999999988876665443 689999999999986666666788889999999
Q ss_pred CccCC
Q 041689 343 NKLLC 347 (652)
Q Consensus 343 N~~~c 347 (652)
|.+..
T Consensus 483 N~l~~ 487 (562)
T 3a79_B 483 NQLKS 487 (562)
T ss_dssp SCCCC
T ss_pred CCCCC
Confidence 98764
No 269
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2e-36 Score=339.90 Aligned_cols=151 Identities=20% Similarity=0.188 Sum_probs=113.6
Q ss_pred eeEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCc-------cccccCC
Q 041689 8 KLELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIA-------DNYLTSS 80 (652)
Q Consensus 8 ~l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~-------~~~l~~~ 80 (652)
.++.+++.++ ++|..+ ++++++|+|++|+++++.+..|.++++|++|+|++|+|+++.+..+ ...+..+
T Consensus 15 ~~~c~~~~l~---~ip~~~-~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 15 TYQCMDQKLS---KVPDDI-PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90 (606)
T ss_dssp EEECTTSCCS---SCCTTS-CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred ceEccCCCcc---cCCCCC-CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCC
Confidence 4555555555 799988 7899999999999999999999999999999999999998866432 2233333
Q ss_pred CCCcccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccc-cCCccccCCCCCCEEEecCcccccc
Q 041689 81 TPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSG-GIPEEIGNLTNLTAIYLGGNKLNGS 159 (652)
Q Consensus 81 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~ 159 (652)
......+..|.++++|++|+|++|.++++++. .++.+++ |++|++++|++++ .+|..|.++++|++|+|++|++++.
T Consensus 91 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~-L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~ 168 (606)
T 3vq2_A 91 PIQSFSPGSFSGLTSLENLVAVETKLASLESF-PIGQLIT-LKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTI 168 (606)
T ss_dssp CCCCCCTTSSTTCTTCCEEECTTSCCCCSSSS-CCTTCTT-CCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEE
T ss_pred cccccChhhcCCcccCCEEEccCCcccccccc-ccCCCCC-CCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceec
Confidence 33333345677888888888888888777665 5777775 8888888888875 3577888888888888888877765
Q ss_pred CCccc
Q 041689 160 IPFTL 164 (652)
Q Consensus 160 ~~~~~ 164 (652)
.+..|
T Consensus 169 ~~~~~ 173 (606)
T 3vq2_A 169 TVNDL 173 (606)
T ss_dssp CTTTT
T ss_pred Chhhh
Confidence 55433
No 270
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=333.40 Aligned_cols=315 Identities=21% Similarity=0.219 Sum_probs=251.4
Q ss_pred ceeeeceeEeccCCCcCCccCC-CCC-CCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCC----Cccc
Q 041689 2 FSISIGKLELNVDDIESPCEIP-SEI-NPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSS----IADN 75 (652)
Q Consensus 2 ~~~~l~~l~l~~~~~~~~~~ip-~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~ 75 (652)
++++++.|+|+.|.+.. +| ..+ ++++|++|+|++|+|+++.|..|.++++|++|+|++|+|++++.. +...
T Consensus 19 ~~~~L~~L~Ls~n~i~~---~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~l~~L~~L 95 (520)
T 2z7x_B 19 LSQKTTILNISQNYISE---LWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCHPTVNLKHL 95 (520)
T ss_dssp CCTTCSEEECCSSCCCC---CCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECCCCCCCSEE
T ss_pred ccccccEEECCCCcccc---cChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCccccCCccEE
Confidence 45689999999999884 44 455 789999999999999998899999999999999999999976653 2333
Q ss_pred cccCCCCCc-ccccccCCCCCCcEEEcccCCCcccCCccchhcccccC--cEEEccCCcc--cccCCccccCCC------
Q 041689 76 YLTSSTPEL-SFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSL--EIFDMSKCNV--SGGIPEEIGNLT------ 144 (652)
Q Consensus 76 ~l~~~~~~~-~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L--~~L~L~~N~l--~~~~~~~~~~l~------ 144 (652)
.+..+.... ..+..|.++++|++|+|++|++++. .+..++. | +.|++++|++ .+..|..+..+.
T Consensus 96 ~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~-L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l 170 (520)
T 2z7x_B 96 DLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS----SVLPIAH-LNISKVLLVLGETYGEKEDPEGLQDFNTESLHI 170 (520)
T ss_dssp ECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG----GGGGGTT-SCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEE
T ss_pred eccCCccccccchhhhccCCcceEEEecCcccchh----hcccccc-ceeeEEEeecccccccccccccccccccceEEE
Confidence 344443322 2346788899999999999988752 3444443 5 6666666666 444444444322
Q ss_pred -----------------------------------------------------------------------------CCC
Q 041689 145 -----------------------------------------------------------------------------NLT 147 (652)
Q Consensus 145 -----------------------------------------------------------------------------~L~ 147 (652)
+|+
T Consensus 171 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~ 250 (520)
T 2z7x_B 171 VFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVW 250 (520)
T ss_dssp ECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCS
T ss_pred EeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCccc
Confidence 455
Q ss_pred EEEecCccccccCCccc-----------------------------------------------------cCCCCCcEEe
Q 041689 148 AIYLGGNKLNGSIPFTL-----------------------------------------------------RELQKLQYVG 174 (652)
Q Consensus 148 ~L~L~~N~l~~~~~~~~-----------------------------------------------------~~l~~L~~L~ 174 (652)
+|++++|++++.+|..+ ..+++|++|+
T Consensus 251 ~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~ 330 (520)
T 2z7x_B 251 YFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLD 330 (520)
T ss_dssp EEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEE
T ss_pred EEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEE
Confidence 55666666554444433 6788999999
Q ss_pred cccCccccccCccccCCCCCcEEEccCCcccc--cccccCCCCCCCCEEEccCCC--CCCCcc-cCCCCccceEeccccc
Q 041689 175 LKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSG--SILTCFSNLASLRTLSLSYND--GPLPLE-IGNLKVLIGIDFSMNN 249 (652)
Q Consensus 175 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~--~~~~~~-~~~l~~L~~L~ls~N~ 249 (652)
+++|++++.+|..+..+++|++|+|++|++++ ..|..|..+++|++|++++|. ..+|.. +..+++|+.|++++|+
T Consensus 331 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~ 410 (520)
T 2z7x_B 331 FSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNI 410 (520)
T ss_dssp CCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSC
T ss_pred eECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCC
Confidence 99999998899999999999999999999997 456789999999999999997 326665 8889999999999999
Q ss_pred CCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCC
Q 041689 250 FSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIP 327 (652)
Q Consensus 250 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 327 (652)
+++..|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+++|+.|++++|+++|.++
T Consensus 411 l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 411 LTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 9987777665 79999999999999 778878899999999999999995544459999999999999999998765
No 271
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=9.2e-37 Score=313.00 Aligned_cols=254 Identities=33% Similarity=0.522 Sum_probs=240.6
Q ss_pred CCCcEEEcccCCCcc--cCCccchhcccccCcEEEccC-CcccccCCccccCCCCCCEEEecCccccccCCccccCCCCC
Q 041689 94 KSLVVFLLSNNPLNG--ILPRMSIGNLSHSLEIFDMSK-CNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKL 170 (652)
Q Consensus 94 ~~L~~L~Ls~N~l~~--~~~~~~~~~l~~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 170 (652)
.+++.|+|++|.+++ ..|. .+..++. |++|+|++ |++.+.+|..|.++++|++|+|++|++++..|..|.++++|
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~-~l~~l~~-L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L 127 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPS-SLANLPY-LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCG-GGGGCTT-CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTC
T ss_pred ceEEEEECCCCCccCCcccCh-hHhCCCC-CCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCC
Confidence 579999999999998 6676 7888887 99999995 99999999999999999999999999999999999999999
Q ss_pred cEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCC-CCCEEEccCCC--CCCCcccCCCCccceEeccc
Q 041689 171 QYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLA-SLRTLSLSYND--GPLPLEIGNLKVLIGIDFSM 247 (652)
Q Consensus 171 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~--~~~~~~~~~l~~L~~L~ls~ 247 (652)
++|+|++|+|++.+|..+..+++|++|+|++|++++..|..+..++ +|++|++++|. +.+|..+..++ |+.|++++
T Consensus 128 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~ 206 (313)
T 1ogq_A 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSR 206 (313)
T ss_dssp CEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCS
T ss_pred CEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcC
Confidence 9999999999999999999999999999999999999999999998 99999999996 57888899997 99999999
Q ss_pred ccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCC
Q 041689 248 NNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIP 327 (652)
Q Consensus 248 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 327 (652)
|++++..|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|+|++.+|..+..+++|+.|+|++|++++.+|
T Consensus 207 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp SEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred CcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 999999999999999999999999999977665 8899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccccCCccCCCCCC
Q 041689 328 KGGSFGNFSAESFEGNKLLCGSPN 351 (652)
Q Consensus 328 ~~~~~~~l~~~~~~~N~~~c~~~~ 351 (652)
....++.++.+++.+|++.|+.|.
T Consensus 286 ~~~~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 286 QGGNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp CSTTGGGSCGGGTCSSSEEESTTS
T ss_pred CCccccccChHHhcCCCCccCCCC
Confidence 998999999999999999999874
No 272
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.2e-35 Score=338.17 Aligned_cols=321 Identities=21% Similarity=0.269 Sum_probs=261.1
Q ss_pred eeeceeEeccCCCcCCccCCCCC-CCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeec-----c--------
Q 041689 4 ISIGKLELNVDDIESPCEIPSEI-NPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGS-----L-------- 69 (652)
Q Consensus 4 ~~l~~l~l~~~~~~~~~~ip~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----~-------- 69 (652)
++|+.|+|+.|.+.. ..|..+ ++++|++|+|++|+++++.|..|.++++|+.|+|++|...+. .
T Consensus 248 ~~L~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~ 325 (680)
T 1ziw_A 248 TNLTMLDLSYNNLNV--VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSF 325 (680)
T ss_dssp SCCCEEECTTSCCCE--ECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTT
T ss_pred CCCCEEECCCCCcCc--cCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhc
Confidence 359999999999873 345556 789999999999999988887777777666666665543210 0
Q ss_pred ---CCCccccccCCCCCcccccccCCC----------------------------CCCcEEEcccCCCcccCCccchhcc
Q 041689 70 ---SSIADNYLTSSTPELSFLSSLSNC----------------------------KSLVVFLLSNNPLNGILPRMSIGNL 118 (652)
Q Consensus 70 ---~~~~~~~l~~~~~~~~~~~~l~~l----------------------------~~L~~L~Ls~N~l~~~~~~~~~~~l 118 (652)
+.+....+..+.........|.++ ++|+.|+|++|+++++.+. .+..+
T Consensus 326 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~-~~~~l 404 (680)
T 1ziw_A 326 QWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESD-AFSWL 404 (680)
T ss_dssp TTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTT-TTTTC
T ss_pred ccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChh-hhhCC
Confidence 011111111111000011112222 4677777788888888776 67888
Q ss_pred cccCcEEEccCCcccccCC-ccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccc--cccCccccCCCCCc
Q 041689 119 SHSLEIFDMSKCNVSGGIP-EEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLE--GTIPYDIFRLVKLY 195 (652)
Q Consensus 119 ~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~ 195 (652)
++ |+.|+|++|++++.+| ..|.++++|++|+|++|++.+..+..|..+++|+.|++++|.++ +.+|..|..+++|+
T Consensus 405 ~~-L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~ 483 (680)
T 1ziw_A 405 GH-LEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLT 483 (680)
T ss_dssp TT-CCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCC
T ss_pred CC-CCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCC
Confidence 76 9999999999987655 78999999999999999999999999999999999999999997 57889999999999
Q ss_pred EEEccCCcccccccccCCCCCCCCEEEccCCCCC-C-----C----cccCCCCccceEecccccCCccCcccccCCCCCc
Q 041689 196 KLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGP-L-----P----LEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQ 265 (652)
Q Consensus 196 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~-~-----~----~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~ 265 (652)
.|+|++|+|+++.+..|..+++|++|+|++|... + | ..+.++++|+.|++++|+++.+.+..|.++++|+
T Consensus 484 ~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~ 563 (680)
T 1ziw_A 484 ILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELK 563 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred EEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcc
Confidence 9999999999999999999999999999999622 1 2 2378999999999999999987777899999999
Q ss_pred EEEccCCcCCCcccccccccccCcceeccccccCCCCchhhc-CCCCCceEEeecCcCcccCCC
Q 041689 266 YLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLE-KLSYLEHLNLSFNKLEGEIPK 328 (652)
Q Consensus 266 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~ 328 (652)
.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+. .+++|+.|++++|++.|.++.
T Consensus 564 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 564 IIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred eeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 999999999988888899999999999999999998888887 789999999999999998874
No 273
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=335.82 Aligned_cols=342 Identities=19% Similarity=0.231 Sum_probs=267.2
Q ss_pred eeeceeEeccCCCcCCccCCCCC-CCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCC-------Cccc
Q 041689 4 ISIGKLELNVDDIESPCEIPSEI-NPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSS-------IADN 75 (652)
Q Consensus 4 ~~l~~l~l~~~~~~~~~~ip~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-------~~~~ 75 (652)
++|+.|+|+.|.+.. ..|..+ ++++|++|+|++|+++++.|..|.++++|++|+|++|++++..+. +...
T Consensus 52 ~~L~~L~Ls~n~i~~--i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 129 (570)
T 2z63_A 52 PELQVLDLSRCEIQT--IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKEL 129 (570)
T ss_dssp SSCCEEECTTCCCCE--ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEE
T ss_pred CCceEEECCCCcCCc--cCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEE
Confidence 468999999998873 234445 789999999999999988889999999999999999999876552 2223
Q ss_pred cccCCCCCc-ccccccCCCCCCcEEEcccCCCcccCCccchhcccc----------------------------------
Q 041689 76 YLTSSTPEL-SFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSH---------------------------------- 120 (652)
Q Consensus 76 ~l~~~~~~~-~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~---------------------------------- 120 (652)
.+..+.... ..+..|.++++|++|++++|+++++.+. .+..+.+
T Consensus 130 ~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~ 208 (570)
T 2z63_A 130 NVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT-DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLR 208 (570)
T ss_dssp ECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGG-GGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEE
T ss_pred ecCCCccceecChhhhcccCCCCEEeCcCCccceecHH-HccchhccchhhhhcccCCCCceecCHHHhccCcceeEecc
Confidence 333332221 2356688888999999998888766443 2322222
Q ss_pred --------------------------------------------------------------------------cCcEEE
Q 041689 121 --------------------------------------------------------------------------SLEIFD 126 (652)
Q Consensus 121 --------------------------------------------------------------------------~L~~L~ 126 (652)
+|+.|+
T Consensus 209 ~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~ 288 (570)
T 2z63_A 209 NNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFS 288 (570)
T ss_dssp SCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEE
T ss_pred cccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEE
Confidence 244444
Q ss_pred ccCCcccccCCccc------------------------------------------cCCCCCCEEEecCccccccC--Cc
Q 041689 127 MSKCNVSGGIPEEI------------------------------------------GNLTNLTAIYLGGNKLNGSI--PF 162 (652)
Q Consensus 127 L~~N~l~~~~~~~~------------------------------------------~~l~~L~~L~L~~N~l~~~~--~~ 162 (652)
+++|.+++ +|..+ ..+++|++|++++|++++.. +.
T Consensus 289 l~~~~l~~-l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 367 (570)
T 2z63_A 289 LVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQ 367 (570)
T ss_dssp EESCEECS-CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEH
T ss_pred ecCccchh-hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCccccccc
Confidence 44444442 22222 34567777778888777544 67
Q ss_pred cccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCccccccc-ccCCCCCCCCEEEccCCC--CCCCcccCCCCc
Q 041689 163 TLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSIL-TCFSNLASLRTLSLSYND--GPLPLEIGNLKV 239 (652)
Q Consensus 163 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~--~~~~~~~~~l~~ 239 (652)
.+.++++|++|++++|.+++..+ .+..+++|++|++++|.+.+..+ ..|..+++|++|++++|. ...|..+.++++
T Consensus 368 ~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 446 (570)
T 2z63_A 368 SDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSS 446 (570)
T ss_dssp HHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTT
T ss_pred cccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCc
Confidence 78999999999999999996555 49999999999999999998766 679999999999999996 456778999999
Q ss_pred cceEecccccCC-ccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEee
Q 041689 240 LIGIDFSMNNFS-SVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLS 318 (652)
Q Consensus 240 L~~L~ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 318 (652)
|+.|++++|.++ +.+|..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..|..|.++++|+.|+++
T Consensus 447 L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 526 (570)
T 2z63_A 447 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLH 526 (570)
T ss_dssp CCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEec
Confidence 999999999998 5688999999999999999999998889999999999999999999999888899999999999999
Q ss_pred cCcCcccCCCCCCC-CCcc--cccccCCccCCCCCC
Q 041689 319 FNKLEGEIPKGGSF-GNFS--AESFEGNKLLCGSPN 351 (652)
Q Consensus 319 ~N~l~~~~p~~~~~-~~l~--~~~~~~N~~~c~~~~ 351 (652)
+|+++|.+|....+ .+++ ...+.+.+ .|+.|.
T Consensus 527 ~N~~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~~~ 561 (570)
T 2z63_A 527 TNPWDCSCPRIDYLSRWLNKNSQKEQGSA-KCSGSG 561 (570)
T ss_dssp SSCBCCCTTTTHHHHHHHHHTGGGEESCC-BBTTTC
T ss_pred CCcccCCCcchHHHHHHHHhccccCCCch-hhCCCC
Confidence 99999998875433 2221 12344555 787663
No 274
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.7e-35 Score=308.64 Aligned_cols=301 Identities=23% Similarity=0.336 Sum_probs=261.7
Q ss_pred eeeceeEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCC
Q 041689 4 ISIGKLELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPE 83 (652)
Q Consensus 4 ~~l~~l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~ 83 (652)
.+|+.|++++|.+.. +|..-.+++|++|+|++|+++++.+ |..+++|++|+|++|.+++.
T Consensus 44 ~~L~~L~l~~~~i~~---~~~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--------------- 103 (347)
T 4fmz_A 44 ESITKLVVAGEKVAS---IQGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--------------- 103 (347)
T ss_dssp TTCSEEECCSSCCCC---CTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC---------------
T ss_pred ccccEEEEeCCcccc---chhhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc---------------
Confidence 368899999999884 6653378999999999999996544 99999999999999998743
Q ss_pred cccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCcc
Q 041689 84 LSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFT 163 (652)
Q Consensus 84 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 163 (652)
+.+.++++|++|+|++|.++++.+ +..+++ |++|++++|.....++ .+..+++|++|++++|.+.+..+
T Consensus 104 ----~~~~~l~~L~~L~l~~n~i~~~~~---~~~l~~-L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~-- 172 (347)
T 4fmz_A 104 ----SALQNLTNLRELYLNEDNISDISP---LANLTK-MYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP-- 172 (347)
T ss_dssp ----GGGTTCTTCSEEECTTSCCCCCGG---GTTCTT-CCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--
T ss_pred ----hHHcCCCcCCEEECcCCcccCchh---hccCCc-eeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--
Confidence 247899999999999999998754 667776 9999999997664444 49999999999999999986554
Q ss_pred ccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCCcccCCCCccce
Q 041689 164 LRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEIGNLKVLIG 242 (652)
Q Consensus 164 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~~~~~l~~L~~ 242 (652)
+..+++|++|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|. ..++. +..+++|+.
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~ 247 (347)
T 4fmz_A 173 IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-LANLSQLTW 247 (347)
T ss_dssp GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCE
T ss_pred hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-hhcCCCCCE
Confidence 8999999999999999995443 8899999999999999997665 8899999999999997 33444 999999999
Q ss_pred EecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcC
Q 041689 243 IDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKL 322 (652)
Q Consensus 243 L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 322 (652)
|++++|.+++. ..+..+++|++|++++|++++. ..+..+++|+.|+|++|++++..|..+..+++|+.|++++|++
T Consensus 248 L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 323 (347)
T 4fmz_A 248 LEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHI 323 (347)
T ss_dssp EECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSC
T ss_pred EECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcc
Confidence 99999999975 5789999999999999999964 4689999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcccccccCCcc
Q 041689 323 EGEIPKGGSFGNFSAESFEGNKL 345 (652)
Q Consensus 323 ~~~~p~~~~~~~l~~~~~~~N~~ 345 (652)
++.+| ...++.++.+++.+|++
T Consensus 324 ~~~~~-~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 324 TDIRP-LASLSKMDSADFANQVI 345 (347)
T ss_dssp CCCGG-GGGCTTCSEESSSCC--
T ss_pred ccccC-hhhhhccceeehhhhcc
Confidence 98877 67888999999999986
No 275
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4.1e-35 Score=303.52 Aligned_cols=287 Identities=19% Similarity=0.255 Sum_probs=232.7
Q ss_pred eeceeEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCc
Q 041689 5 SIGKLELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPEL 84 (652)
Q Consensus 5 ~l~~l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~ 84 (652)
+++.++++.+.++ ++|..+ ++++++|+|++|+|+++.+..|.++++|++|+|++|+|+++.+
T Consensus 32 ~l~~l~~~~~~l~---~lp~~~-~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-------------- 93 (330)
T 1xku_A 32 HLRVVQCSDLGLE---KVPKDL-PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISP-------------- 93 (330)
T ss_dssp ETTEEECTTSCCC---SCCCSC-CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCT--------------
T ss_pred CCeEEEecCCCcc---ccCccC-CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCH--------------
Confidence 6778888877776 688877 6789999999999998888889999999999999999986654
Q ss_pred ccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccc--cCCc
Q 041689 85 SFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNG--SIPF 162 (652)
Q Consensus 85 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~ 162 (652)
..|.++++|++|+|++|+++.++.. .+ ++|++|++++|++++..+..|.++++|+.|+|++|+++. ..+.
T Consensus 94 ---~~~~~l~~L~~L~Ls~n~l~~l~~~-~~----~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 165 (330)
T 1xku_A 94 ---GAFAPLVKLERLYLSKNQLKELPEK-MP----KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENG 165 (330)
T ss_dssp ---TTTTTCTTCCEEECCSSCCSBCCSS-CC----TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTT
T ss_pred ---HHhcCCCCCCEEECCCCcCCccChh-hc----ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChh
Confidence 2578889999999999999877554 22 359999999999998888889999999999999999963 6778
Q ss_pred cccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-C-CCCcccCCCCcc
Q 041689 163 TLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-G-PLPLEIGNLKVL 240 (652)
Q Consensus 163 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~-~~~~~~~~l~~L 240 (652)
.|.++++|++|++++|+++ .+|..+. ++|++|++++|++++..+..|..+++|++|+|++|. . ..+..+..+++|
T Consensus 166 ~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 242 (330)
T 1xku_A 166 AFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHL 242 (330)
T ss_dssp GGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTC
T ss_pred hccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCC
Confidence 8999999999999999998 4665554 689999999999998888889999999999999886 2 234467888888
Q ss_pred ceEecccccCCccCcccccCCCCCcEEEccCCcCCCccccccccc------ccCcceeccccccCC--CCchhhcCCCCC
Q 041689 241 IGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDL------ISLKSLNFSNNNLSG--AIPLLLEKLSYL 312 (652)
Q Consensus 241 ~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~~--~~~~~~~~l~~L 312 (652)
+.|++++|+++ .+|..+..+++|++|++++|+|++..+..|... +.|+.|++++|.+.. ..|..|..+..+
T Consensus 243 ~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l 321 (330)
T 1xku_A 243 RELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVR 321 (330)
T ss_dssp CEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCG
T ss_pred CEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccce
Confidence 88888888888 467778888888888888888887766666543 678888888888753 566778888888
Q ss_pred ceEEeecCc
Q 041689 313 EHLNLSFNK 321 (652)
Q Consensus 313 ~~L~L~~N~ 321 (652)
+.++|++|+
T Consensus 322 ~~l~L~~N~ 330 (330)
T 1xku_A 322 AAVQLGNYK 330 (330)
T ss_dssp GGEEC----
T ss_pred eEEEecccC
Confidence 888888874
No 276
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6.5e-36 Score=342.28 Aligned_cols=330 Identities=18% Similarity=0.228 Sum_probs=208.8
Q ss_pred eeceeEeccCCCcCCccCCCCC-CCCCCCEEEC-CCCcCccc--------------------------------------
Q 041689 5 SIGKLELNVDDIESPCEIPSEI-NPHNLEELLL-GQNNLVGV-------------------------------------- 44 (652)
Q Consensus 5 ~l~~l~l~~~~~~~~~~ip~~~-~~~~L~~L~L-s~N~l~~~-------------------------------------- 44 (652)
.+..|+|++|.+. +.+|..+ ++++|++|+| ++|.++|.
T Consensus 324 ~V~~L~Ls~~~L~--G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s 401 (876)
T 4ecn_A 324 RVTGLSLAGFGAK--GRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLS 401 (876)
T ss_dssp CEEEEECTTTCCE--EEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSC
T ss_pred CEEEEECccCCCC--CcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhh
Confidence 4667788888777 4688877 8888888888 66654433
Q ss_pred --------------------------------------CCccccCCCCCCEEEcCCCcCee------------------c
Q 041689 45 --------------------------------------VPAAIFDVSTLKDLALQDNYLSG------------------S 68 (652)
Q Consensus 45 --------------------------------------~p~~~~~l~~L~~L~Ls~N~l~~------------------~ 68 (652)
+|..|.++++|+.|+|++|+|++ +
T Consensus 402 ~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 402 DLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 67778888888888888888887 3
Q ss_pred cCCCc--------cccccCCCCCcccccccCCCCCCcEEEcccCC-Ccc-cCCccchhccc------ccCcEEEccCCcc
Q 041689 69 LSSIA--------DNYLTSSTPELSFLSSLSNCKSLVVFLLSNNP-LNG-ILPRMSIGNLS------HSLEIFDMSKCNV 132 (652)
Q Consensus 69 ~~~~~--------~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~-l~~-~~~~~~~~~l~------~~L~~L~L~~N~l 132 (652)
++.+. ...+..+......+..|.++++|++|+|++|+ +++ ..|. .++.++ ++|++|+|++|++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~-~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKA-DWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHH-HHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchH-HHHhhhhcccccCCccEEEeeCCcC
Confidence 33321 11122221111223456666677777777776 665 3333 344443 1277777777777
Q ss_pred cccCCc--cccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccccCCCC-CcEEEccCCccccccc
Q 041689 133 SGGIPE--EIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVK-LYKLDLGGNKLSGSIL 209 (652)
Q Consensus 133 ~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~ 209 (652)
+ .+|. .|.++++|+.|+|++|+++ .+| .|..+++|+.|+|++|+|+ .+|..+..+++ |+.|+|++|+++ .+|
T Consensus 561 ~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp 635 (876)
T 4ecn_A 561 E-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIP 635 (876)
T ss_dssp C-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCC
T ss_pred C-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCc
Confidence 6 5555 6677777777777777776 455 6667777777777777776 66666666666 777777777776 455
Q ss_pred ccCCCCCC--CCEEEccCCC--CCCC---cccC--CCCccceEecccccCCccCcccccCCCCCcEEEccCCcCCCcccc
Q 041689 210 TCFSNLAS--LRTLSLSYND--GPLP---LEIG--NLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPD 280 (652)
Q Consensus 210 ~~~~~l~~--L~~L~Ls~N~--~~~~---~~~~--~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 280 (652)
..+..++. |+.|+|++|. +.+| ..+. .+++|+.|+|++|+++.+++..+..+++|+.|+|++|+|+ .+|.
T Consensus 636 ~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~ 714 (876)
T 4ecn_A 636 NIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPE 714 (876)
T ss_dssp SCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCT
T ss_pred hhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccCh
Confidence 55555543 6667776664 2222 1122 2346777777777777544444456777777777777777 4444
Q ss_pred cccc--------cccCcceeccccccCCCCchhhc--CCCCCceEEeecCcCcccCCCCCCCCCcccccccCCc
Q 041689 281 SVGD--------LISLKSLNFSNNNLSGAIPLLLE--KLSYLEHLNLSFNKLEGEIPKGGSFGNFSAESFEGNK 344 (652)
Q Consensus 281 ~~~~--------l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~~~~~~N~ 344 (652)
.+.. +++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++++.++....+.+++.+++++|+
T Consensus 715 ~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~ 787 (876)
T 4ecn_A 715 NSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQR 787 (876)
T ss_dssp TSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCB
T ss_pred HHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCC
Confidence 3322 237777777777777 5666665 7777777777777777754445666677777776655
No 277
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.1e-35 Score=305.98 Aligned_cols=286 Identities=22% Similarity=0.260 Sum_probs=180.4
Q ss_pred eeceeEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCc
Q 041689 5 SIGKLELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPEL 84 (652)
Q Consensus 5 ~l~~l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~ 84 (652)
+++.++++.+.++ ++|..+ +++|++|+|++|+|+++.|..|.++++|++|+|++|+|+++.+
T Consensus 34 ~l~~l~~~~~~l~---~ip~~~-~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-------------- 95 (332)
T 2ft3_A 34 HLRVVQCSDLGLK---AVPKEI-SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHE-------------- 95 (332)
T ss_dssp ETTEEECCSSCCS---SCCSCC-CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECG--------------
T ss_pred cCCEEECCCCCcc---ccCCCC-CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCH--------------
Confidence 4666666666655 566665 4567777777777776666667777777777777777765443
Q ss_pred ccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCcccc--ccCCc
Q 041689 85 SFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLN--GSIPF 162 (652)
Q Consensus 85 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~ 162 (652)
..|.++++|++|+|++|+++.+++. .+ .+|++|++++|+|+++.+..|.++++|++|++++|.++ +..+.
T Consensus 96 ---~~~~~l~~L~~L~L~~n~l~~l~~~-~~----~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 167 (332)
T 2ft3_A 96 ---KAFSPLRKLQKLYISKNHLVEIPPN-LP----SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPG 167 (332)
T ss_dssp ---GGSTTCTTCCEEECCSSCCCSCCSS-CC----TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTT
T ss_pred ---hHhhCcCCCCEEECCCCcCCccCcc-cc----ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcc
Confidence 2466677777777777777655443 11 23777777777777666666777777777777777774 25566
Q ss_pred cccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC--CCCCcccCCCCcc
Q 041689 163 TLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND--GPLPLEIGNLKVL 240 (652)
Q Consensus 163 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~--~~~~~~~~~l~~L 240 (652)
.|..+ +|++|++++|++++ +|..+. ++|++|++++|++++..+..|..+++|++|+|++|. ...+..+..+++|
T Consensus 168 ~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 243 (332)
T 2ft3_A 168 AFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTL 243 (332)
T ss_dssp SSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTC
T ss_pred cccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCC
Confidence 66666 67777777777763 444443 467777777777776666666666777777776664 2223346666666
Q ss_pred ceEecccccCCccCcccccCCCCCcEEEccCCcCCCccccccccc------ccCcceeccccccC--CCCchhhcCCCCC
Q 041689 241 IGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDL------ISLKSLNFSNNNLS--GAIPLLLEKLSYL 312 (652)
Q Consensus 241 ~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~--~~~~~~~~~l~~L 312 (652)
+.|++++|+++ .+|..+..+++|++|++++|+|++..+..|..+ .+|+.|++++|.+. +..|.+|..+++|
T Consensus 244 ~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L 322 (332)
T 2ft3_A 244 RELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDR 322 (332)
T ss_dssp CEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCS
T ss_pred CEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchh
Confidence 66666666666 345556666666666666666665555555442 45666666666665 4555666666666
Q ss_pred ceEEeecCc
Q 041689 313 EHLNLSFNK 321 (652)
Q Consensus 313 ~~L~L~~N~ 321 (652)
+.+++++|+
T Consensus 323 ~~l~l~~n~ 331 (332)
T 2ft3_A 323 LAIQFGNYK 331 (332)
T ss_dssp TTEEC----
T ss_pred hhhhccccc
Confidence 666666653
No 278
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=344.47 Aligned_cols=321 Identities=22% Similarity=0.212 Sum_probs=226.7
Q ss_pred ceeeeceeEeccCCCcCCccCCCCC-CCCCCCEEECCCCcCc-ccCCccccCCCCCCEEEcCCCcCeeccCCCccccccC
Q 041689 2 FSISIGKLELNVDDIESPCEIPSEI-NPHNLEELLLGQNNLV-GVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTS 79 (652)
Q Consensus 2 ~~~~l~~l~l~~~~~~~~~~ip~~~-~~~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 79 (652)
+|.+++.|+|+.|.++. ..|..+ ++++|++|+|++|++. .+.|.+|.++++|++|+|++|+|++..+
T Consensus 22 lp~~l~~LdLs~N~i~~--i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p--------- 90 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRT--VTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP--------- 90 (844)
T ss_dssp SCTTCCEEEEESCCCCE--ECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT---------
T ss_pred CCCCcCEEECCCCcCCc--cChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH---------
Confidence 35566677777766663 234445 6667777777777433 3336667777777777777777665544
Q ss_pred CCCCcccccccCCCCCCcEEEcccCCCcccCCc-cchhcccccCcEEEccCCcccccCC-ccccCCCCCCEEEecCcccc
Q 041689 80 STPELSFLSSLSNCKSLVVFLLSNNPLNGILPR-MSIGNLSHSLEIFDMSKCNVSGGIP-EEIGNLTNLTAIYLGGNKLN 157 (652)
Q Consensus 80 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~~~l~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~ 157 (652)
..|.++++|++|+|++|.+++..+. ..+.++++ |++|+|++|++++..+ ..|+++++|++|+|++|.++
T Consensus 91 --------~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~-L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 91 --------DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKA-LTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF 161 (844)
T ss_dssp --------TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSS-CCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCC
T ss_pred --------hHccCCcccCEeeCcCCCCCcccccCccccccCC-CCEEECCCCcccccccchhHhhCCCCCEEECCCCcCC
Confidence 2466777777777777777764332 23666665 7777777777776644 46777777777777777777
Q ss_pred ccCCccccCC--CCCcEEecccCccccccCccccCCCC------CcEEEccCCcccccccccCC----------------
Q 041689 158 GSIPFTLREL--QKLQYVGLKDNKLEGTIPYDIFRLVK------LYKLDLGGNKLSGSILTCFS---------------- 213 (652)
Q Consensus 158 ~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~------L~~L~L~~N~l~~~~~~~~~---------------- 213 (652)
+..+..|..+ ++|+.|+|++|.+.+..|..+..+.+ |+.|++++|.+++..+..+.
T Consensus 162 ~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~ 241 (844)
T 3j0a_A 162 LVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHH 241 (844)
T ss_dssp CCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSS
T ss_pred eeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccc
Confidence 7777777766 77777777777777766666655554 88888888876654443322
Q ss_pred --------------------C--CCCCCEEEccCCC--CCCCcccCCCCccceEecccccCCccCcccccCCCCCcEEEc
Q 041689 214 --------------------N--LASLRTLSLSYND--GPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFL 269 (652)
Q Consensus 214 --------------------~--l~~L~~L~Ls~N~--~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L 269 (652)
+ .++|+.|+|++|. ...|..+..+++|+.|+|++|++++..|..|.++++|++|+|
T Consensus 242 ~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 321 (844)
T 3j0a_A 242 IMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNL 321 (844)
T ss_dssp CCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEE
T ss_pred cccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEEC
Confidence 1 2578888888885 334566788888888888888888887888888888888888
Q ss_pred cCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCCCCCCCCcccccccCCccC
Q 041689 270 GYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLL 346 (652)
Q Consensus 270 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~~~~~~N~~~ 346 (652)
++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+++... ++.++.+.+.+|.+.
T Consensus 322 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~----~~~L~~L~l~~N~l~ 394 (844)
T 3j0a_A 322 SYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHF----IPSIPDIFLSGNKLV 394 (844)
T ss_dssp ESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSS----CCSCSEEEEESCCCC
T ss_pred CCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccC----CCCcchhccCCCCcc
Confidence 8888887778888888888888888888887777778888888888888888875432 555666666666654
No 279
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.1e-37 Score=348.12 Aligned_cols=213 Identities=21% Similarity=0.253 Sum_probs=183.0
Q ss_pred cCCCccceeccccceEEEEEEeC--CCcEEEEEEeecc-cchhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCc-----e
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG--DGMEVAVKVFHLQ-CGRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEF-----K 496 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-----~ 496 (652)
++|++.+.||+|+||.||+|.+. +|+.||||++... .......+.+|++++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67999999999999999999875 5899999998644 23445678899999999999999999999987655 6
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCcccc
Q 041689 497 ELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLI 576 (652)
Q Consensus 497 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 576 (652)
|+||||+++++|.+++.. .+++.++..|+.|++.||.|||++ ||+||||||+||+++.+ .+||+|||+++...
T Consensus 160 ~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 999999999999987654 589999999999999999999999 99999999999999986 89999999998653
Q ss_pred CCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcc-----------------hhhhhhhcccc
Q 041689 577 GEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCV-----------------SFVFNLAMECT 639 (652)
Q Consensus 577 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~-----------------~~l~~l~~~~l 639 (652)
.. ....||+.|+|||++.++ ++.++|||||||++|||++|..|+. ..+.+++.+||
T Consensus 233 ~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 305 (681)
T 2pzi_A 233 SF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGRLLRRAI 305 (681)
T ss_dssp CC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCCTTCHHHHHCHHHHHHHHHHT
T ss_pred cC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccccccccccccCHHHHHHHhhhc
Confidence 21 345699999999998765 4889999999999999999988753 34778999999
Q ss_pred hhhhccccCccC
Q 041689 640 IESLELRINAKE 651 (652)
Q Consensus 640 ~~~p~~Rpt~~e 651 (652)
..||++||+..+
T Consensus 306 ~~dP~~R~~~~~ 317 (681)
T 2pzi_A 306 DPDPRQRFTTAE 317 (681)
T ss_dssp CSSGGGSCSSHH
T ss_pred cCChhhCCCHHH
Confidence 999999997643
No 280
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=4.6e-36 Score=306.13 Aligned_cols=196 Identities=19% Similarity=0.262 Sum_probs=170.3
Q ss_pred cCCCcc-ceeccccceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHH-HhcCCCeeeeEEeeeec----CCceE
Q 041689 425 YGFNEN-NLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIM-KSIHYRNLVKIISSCSN----EEFKE 497 (652)
Q Consensus 425 ~~y~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~----~~~~~ 497 (652)
++|.+. +.||+|+||.||+|... +++.||+|+++.. ..+.+|++++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 457666 78999999999999864 6899999998632 4567888888 55699999999999876 67789
Q ss_pred EEEEccCCCChhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCC---CCcEEEecccCCc
Q 041689 498 LVLEHMPHGSLEKCLYSSN-CILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDD---TMVAHLSDFGITK 573 (652)
Q Consensus 498 lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~---~~~~kl~Dfg~~~ 573 (652)
+||||+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||++.
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 9999999999999998754 3689999999999999999999999 9999999999999997 7899999999987
Q ss_pred cccCCCCccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCc--------------------------
Q 041689 574 LLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQC-------------------------- 627 (652)
Q Consensus 574 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~-------------------------- 627 (652)
... +..++.++||||+||++|||++|+.||
T Consensus 169 ~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (299)
T 3m2w_A 169 ETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 224 (299)
T ss_dssp ECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHH
T ss_pred ccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCch
Confidence 531 245678899999999999999999996
Q ss_pred -----chhhhhhhcccchhhhccccCccCC
Q 041689 628 -----VSFVFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 628 -----~~~l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+..+.+++.+||+.||++|||++|+
T Consensus 225 ~~~~~~~~~~~li~~~l~~dP~~Rps~~e~ 254 (299)
T 3m2w_A 225 EWSEVSEEVKMLIRNLLKTEPTQRMTITEF 254 (299)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred hcccCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 3347889999999999999999874
No 281
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=3.9e-35 Score=325.46 Aligned_cols=156 Identities=19% Similarity=0.214 Sum_probs=97.7
Q ss_pred EeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccc
Q 041689 10 ELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSS 89 (652)
Q Consensus 10 ~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~ 89 (652)
+.+.+.++ ++|..+ +++|++|+|++|+|+++.|..|.++++|++|+|++|+|++.++. +
T Consensus 11 ~~~~~~l~---~ip~~~-~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~-----------------~ 69 (549)
T 2z81_A 11 DGRSRSFT---SIPSGL-TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD-----------------A 69 (549)
T ss_dssp ECTTSCCS---SCCSCC-CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT-----------------T
T ss_pred ECCCCccc---cccccC-CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh-----------------h
Confidence 44444444 899987 68999999999999999999999999999999999999987763 3
Q ss_pred cCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCccccc-CCccccCCCCCCEEEecCcc-ccccCCccccCC
Q 041689 90 LSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGG-IPEEIGNLTNLTAIYLGGNK-LNGSIPFTLREL 167 (652)
Q Consensus 90 l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l 167 (652)
|.++++|++|+|++|+++++++. .++.+++ |++|+|++|++++. .|..|.++++|++|+|++|+ +..+.+..|.++
T Consensus 70 ~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~-L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l 147 (549)
T 2z81_A 70 FYSLGSLEHLDLSDNHLSSLSSS-WFGPLSS-LKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGL 147 (549)
T ss_dssp TTTCTTCCEEECTTSCCCSCCHH-HHTTCTT-CCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred ccccccCCEEECCCCccCccCHH-HhccCCC-CcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcc
Confidence 44555555555555555554443 3444443 55555555555532 23445555555555555554 232223445555
Q ss_pred CCCcEEecccCccccccCccc
Q 041689 168 QKLQYVGLKDNKLEGTIPYDI 188 (652)
Q Consensus 168 ~~L~~L~L~~N~l~~~~~~~~ 188 (652)
++|++|++++|++++..|..+
T Consensus 148 ~~L~~L~L~~n~l~~~~~~~l 168 (549)
T 2z81_A 148 TSLNELEIKALSLRNYQSQSL 168 (549)
T ss_dssp CEEEEEEEEETTCCEECTTTT
T ss_pred cccCeeeccCCcccccChhhh
Confidence 555555555555554444433
No 282
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.3e-34 Score=314.22 Aligned_cols=322 Identities=24% Similarity=0.350 Sum_probs=231.4
Q ss_pred eeceeEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccC-----CCccccccC
Q 041689 5 SIGKLELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLS-----SIADNYLTS 79 (652)
Q Consensus 5 ~l~~l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-----~~~~~~l~~ 79 (652)
+++.|+++.|.+. .+|..-.+++|++|+|++|+++++.| |.++++|++|+|++|++++..+ .+....+..
T Consensus 47 ~l~~L~l~~~~i~---~l~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~ 121 (466)
T 1o6v_A 47 QVTTLQADRLGIK---SIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 121 (466)
T ss_dssp TCCEEECCSSCCC---CCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCS
T ss_pred cccEEecCCCCCc---cCcchhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChhhcCCCCCCEEECCC
Confidence 5667777777766 35543366777777777777775443 7777777777777777765543 111122222
Q ss_pred CCCCcccccccCCCCCCcEEEcccCCCcccCCc------------------cchhcccccCcEEEccCCcccccCCcccc
Q 041689 80 STPELSFLSSLSNCKSLVVFLLSNNPLNGILPR------------------MSIGNLSHSLEIFDMSKCNVSGGIPEEIG 141 (652)
Q Consensus 80 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~------------------~~~~~l~~~L~~L~L~~N~l~~~~~~~~~ 141 (652)
+. +..+..+.++++|++|++++|.++++..- ..+..++. |++|++++|++++. ..+.
T Consensus 122 n~--l~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~-L~~L~l~~n~l~~~--~~l~ 196 (466)
T 1o6v_A 122 NQ--ITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTT-LERLDISSNKVSDI--SVLA 196 (466)
T ss_dssp SC--CCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTT-CCEEECCSSCCCCC--GGGG
T ss_pred CC--CCCChHHcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCC-CCEEECcCCcCCCC--hhhc
Confidence 21 11222366777777777777777654210 02445554 88888888888754 3477
Q ss_pred CCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEE
Q 041689 142 NLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTL 221 (652)
Q Consensus 142 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 221 (652)
.+++|++|++++|++++..| +..+++|++|++++|++++. +.+..+++|+.|++++|.+++..+ +..+++|++|
T Consensus 197 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 270 (466)
T 1o6v_A 197 KLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTEL 270 (466)
T ss_dssp GCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEE
T ss_pred cCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEE
Confidence 88888888888888876555 67788888888888888743 357788888888888888887655 7888888888
Q ss_pred EccCCCCCCCcccCCCCccceEecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCC
Q 041689 222 SLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGA 301 (652)
Q Consensus 222 ~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 301 (652)
++++|.......+..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..| +..+++|+.|++++|++++.
T Consensus 271 ~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 271 KLGANQISNISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp ECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred ECCCCccCccccccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 8888863222237888888888888888887544 7788888888888888887655 77888888888888888865
Q ss_pred CchhhcCCCCCceEEeecCcCcccCCCCCCCCCcccccccCCccCCCC
Q 041689 302 IPLLLEKLSYLEHLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGS 349 (652)
Q Consensus 302 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~~~~~~N~~~c~~ 349 (652)
..+..+++|+.|++++|++++.+| ...++.++.+++.+|++...+
T Consensus 347 --~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~~~~~p 391 (466)
T 1o6v_A 347 --SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQAWTNAP 391 (466)
T ss_dssp --GGGTTCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCEEEECCC
T ss_pred --hhhccCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCCcccCCc
Confidence 367888889999999999888777 677788888888888887643
No 283
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-36 Score=323.32 Aligned_cols=218 Identities=18% Similarity=0.162 Sum_probs=171.7
Q ss_pred hcCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCC-Cee---------------
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHY-RNL--------------- 483 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~ni--------------- 483 (652)
...|...+.||+|+||.||+|++. +|+.||||+++... ....+.+.+|+.+++.++| ++.
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 345778899999999999999954 69999999987432 2335778999999999977 211
Q ss_pred ee------EEeeeec-----CCceEEEEEccCCCChhhhhh------cCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCe
Q 041689 484 VK------IISSCSN-----EEFKELVLEHMPHGSLEKCLY------SSNCILDIFQRLNIMIDVASVLEYLHFNFLVPV 546 (652)
Q Consensus 484 v~------~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 546 (652)
+. +..++.. ....+++|+++ +++|.+++. .....+++..+..++.|++.||+|||++ +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 11 1111111 22456777765 579999884 2233577888999999999999999999 99
Q ss_pred EecCCCCCCeeeCCCCcEEEecccCCccccCCCCccccccccCCccccCcccc----------ccCccCcccchhhHHHH
Q 041689 547 IHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYG----------REGRVFANGDVYSFGIM 616 (652)
Q Consensus 547 iH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDvwslG~v 616 (652)
+||||||+|||++.++.+||+|||+++... .......| +.|+|||++ ....++.++|||||||+
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~-----~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi 306 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG-----ASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA 306 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT-----EEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecC-----CccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence 999999999999999999999999988642 11344567 999999998 56678899999999999
Q ss_pred HHHHHhCCCCcch-------------------hhhhhhcccchhhhccccCccC
Q 041689 617 LMEIHSAKQQCVS-------------------FVFNLAMECTIESLELRINAKE 651 (652)
Q Consensus 617 l~elltg~~p~~~-------------------~l~~l~~~~l~~~p~~Rpt~~e 651 (652)
+|||++|+.||.. .+.+++.+||+.||++|||+.|
T Consensus 307 l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ 360 (413)
T 3dzo_A 307 IYWIWCADLPNTDDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQ 360 (413)
T ss_dssp HHHHHHSSCCCCTTGGGSCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred HHHHHHCCCCCCCcchhhhHHHHHhhcccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 9999999999654 3788999999999999999865
No 284
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.9e-35 Score=301.80 Aligned_cols=249 Identities=27% Similarity=0.402 Sum_probs=157.1
Q ss_pred CCCCEEECCCCcCcc--cCCccccCCCCCCEEEcCC-CcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCC
Q 041689 29 HNLEELLLGQNNLVG--VVPAAIFDVSTLKDLALQD-NYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNP 105 (652)
Q Consensus 29 ~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~ 105 (652)
.++++|+|++|++++ .+|..|.++++|++|+|++ |.+++..| ..|.++++|++|+|++|+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p-----------------~~l~~l~~L~~L~Ls~n~ 112 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIP-----------------PAIAKLTQLHYLYITHTN 112 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCC-----------------GGGGGCTTCSEEEEEEEC
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCC-----------------hhHhcCCCCCEEECcCCe
Confidence 466777777777766 6666777777777777773 66664443 235566666666666666
Q ss_pred CcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCC-CCcEEecccCcccccc
Q 041689 106 LNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQ-KLQYVGLKDNKLEGTI 184 (652)
Q Consensus 106 l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~ 184 (652)
+++..|. .+..+++ |++|+|++|+|++.+|..|..+++|++|+|++|++++..|..+..++ +|++|+|++|++++.+
T Consensus 113 l~~~~p~-~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~ 190 (313)
T 1ogq_A 113 VSGAIPD-FLSQIKT-LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKI 190 (313)
T ss_dssp CEEECCG-GGGGCTT-CCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEEC
T ss_pred eCCcCCH-HHhCCCC-CCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccC
Confidence 6655555 5555654 66666666666666666666666666666666666666666666665 6666666666666666
Q ss_pred CccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCccCcccccCCCCC
Q 041689 185 PYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDL 264 (652)
Q Consensus 185 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L 264 (652)
|..+..+. |++|+|++|++++..|..|..+++|++|+|++ |++++.+|. +..+++|
T Consensus 191 ~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~----------------------N~l~~~~~~-~~~l~~L 246 (313)
T 1ogq_A 191 PPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAK----------------------NSLAFDLGK-VGLSKNL 246 (313)
T ss_dssp CGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCS----------------------SEECCBGGG-CCCCTTC
T ss_pred ChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCC----------------------CceeeecCc-ccccCCC
Confidence 66666665 66666666666665555555555555555554 555543333 5556666
Q ss_pred cEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCc
Q 041689 265 QYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNK 321 (652)
Q Consensus 265 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 321 (652)
++|+|++|++++.+|..|..+++|+.|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 247 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 247 NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp CEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred CEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 66666666666666666666666666666666666666554 556666666666666
No 285
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=6.9e-36 Score=302.27 Aligned_cols=192 Identities=13% Similarity=0.040 Sum_probs=168.6
Q ss_pred cCCCccceeccccceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEEE
Q 041689 425 YGFNENNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 425 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 500 (652)
++|++.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999975 58999999997653 233467899999999999999999999999999999999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCC
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQ 580 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 580 (652)
||++|++|.+++... ....++..++.|++.||+|||++ ||+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc----------
Confidence 999999999998643 35567888999999999999999 99999999999999999999998543
Q ss_pred ccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCCcch------------------------------h
Q 041689 581 SMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVS------------------------------F 630 (652)
Q Consensus 581 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~------------------------------~ 630 (652)
|++| ++.++|||||||++|||++|+.||.. .
T Consensus 175 ------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T 3uqc_A 175 ------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQ 235 (286)
T ss_dssp ------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHH
T ss_pred ------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHH
Confidence 3333 67889999999999999999999643 2
Q ss_pred hhhhhcccchhhhccccCccCC
Q 041689 631 VFNLAMECTIESLELRINAKEI 652 (652)
Q Consensus 631 l~~l~~~~l~~~p~~Rpt~~ei 652 (652)
+.+++.+||+.||++| |++|+
T Consensus 236 l~~li~~~l~~dP~~R-s~~el 256 (286)
T 3uqc_A 236 ISAVAARSVQGDGGIR-SASTL 256 (286)
T ss_dssp HHHHHHHHHCTTSSCC-CHHHH
T ss_pred HHHHHHHHcccCCccC-CHHHH
Confidence 6889999999999999 98764
No 286
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.1e-36 Score=316.26 Aligned_cols=192 Identities=17% Similarity=0.157 Sum_probs=159.4
Q ss_pred hcCCCccceeccccceEEEEEEeCCCcEEEEEEeeccc--------chhhhhHHHHHHHHHhcC---------CCeeeeE
Q 041689 424 TYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQC--------GRAFKSFDIECEIMKSIH---------YRNLVKI 486 (652)
Q Consensus 424 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~~ 486 (652)
.++|++.+.||+|+||.||+|++ +|+.||||+++... ....+.+.+|+++++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 45688999999999999999998 78999999997552 223467889999999886 6666555
Q ss_pred Eee-----------------eec-------------CCceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 041689 487 ISS-----------------CSN-------------EEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLE 536 (652)
Q Consensus 487 ~~~-----------------~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~ 536 (652)
.+. +.+ .+..|+||||+++|++.+.+.. ..+++..+..++.|++.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 554 333 6789999999999977666644 35899999999999999999
Q ss_pred HHH-cCCCCCeEecCCCCCCeeeCCCC--------------------cEEEecccCCccccCCCCccccccccCCccccC
Q 041689 537 YLH-FNFLVPVIHCDLKPSNVLLDDTM--------------------VAHLSDFGITKLLIGEDQSMTQTQTLATIGYIA 595 (652)
Q Consensus 537 ~LH-~~~~~~iiH~dlkp~NIll~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~a 595 (652)
||| ++ +|+||||||+|||++.++ .+||+|||+|+.... ....||+.|+|
T Consensus 176 ~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~a 245 (336)
T 2vuw_A 176 VAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMD 245 (336)
T ss_dssp HHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTC
T ss_pred HHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccC
Confidence 999 89 999999999999999887 999999999987532 23479999999
Q ss_pred ccccccCccCcccchhhHHHH-HHHHHhCCCCcch
Q 041689 596 PEYGREGRVFANGDVYSFGIM-LMEIHSAKQQCVS 629 (652)
Q Consensus 596 PE~~~~~~~~~~sDvwslG~v-l~elltg~~p~~~ 629 (652)
||++.+.. +.++||||+|++ .+++++|..||..
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~ 279 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN 279 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcc
Confidence 99998766 889999998777 7778888888753
No 287
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=5.1e-34 Score=295.50 Aligned_cols=296 Identities=20% Similarity=0.222 Sum_probs=236.7
Q ss_pred CccCCCCCC--C-----CCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccC
Q 041689 19 PCEIPSEIN--P-----HNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLS 91 (652)
Q Consensus 19 ~~~ip~~~~--~-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~ 91 (652)
+.++|..+. . .+++.+++++|.++ .+|..+. ++|+.|+|++|.|+++++. .|.
T Consensus 16 l~~lp~~~~~~cp~~c~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~-----------------~~~ 75 (332)
T 2ft3_A 16 LDSLPPTYSAMCPFGCHCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKD-----------------DFK 75 (332)
T ss_dssp ---------CCCCSSCEEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTT-----------------TTT
T ss_pred cccCCCcccCCCCCCCcccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHh-----------------Hhh
Confidence 346776541 1 37999999999998 5666553 6899999999999876652 578
Q ss_pred CCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCc
Q 041689 92 NCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQ 171 (652)
Q Consensus 92 ~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 171 (652)
++++|++|+|++|+++++.+. .+..+++ |++|+|++|+++.+ |..+. ++|++|+|++|++++..+..|.++++|+
T Consensus 76 ~l~~L~~L~L~~n~l~~~~~~-~~~~l~~-L~~L~L~~n~l~~l-~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~ 150 (332)
T 2ft3_A 76 GLQHLYALVLVNNKISKIHEK-AFSPLRK-LQKLYISKNHLVEI-PPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMN 150 (332)
T ss_dssp TCTTCCEEECCSSCCCEECGG-GSTTCTT-CCEEECCSSCCCSC-CSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCC
T ss_pred CCCCCcEEECCCCccCccCHh-HhhCcCC-CCEEECCCCcCCcc-Ccccc--ccCCEEECCCCccCccCHhHhCCCccCC
Confidence 899999999999999988776 7888886 99999999999954 44443 8999999999999988888899999999
Q ss_pred EEecccCcccc--ccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC--CCCCcccCCCCccceEeccc
Q 041689 172 YVGLKDNKLEG--TIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND--GPLPLEIGNLKVLIGIDFSM 247 (652)
Q Consensus 172 ~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~--~~~~~~~~~l~~L~~L~ls~ 247 (652)
+|++++|.++. ..+..+..+ +|++|++++|++++++.. +. ++|++|++++|. ...+..+..+++|+.|++++
T Consensus 151 ~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~-~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~ 226 (332)
T 2ft3_A 151 CIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKD-LP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGH 226 (332)
T ss_dssp EEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSS-SC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCS
T ss_pred EEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCcc-cc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCC
Confidence 99999999963 677778887 999999999999975443 33 789999999996 33446789999999999999
Q ss_pred ccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCC------CCCceEEeecCc
Q 041689 248 NNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKL------SYLEHLNLSFNK 321 (652)
Q Consensus 248 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~L~~N~ 321 (652)
|++++..+..|..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+|++..+..|... ..|+.|++++|+
T Consensus 227 N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~ 305 (332)
T 2ft3_A 227 NQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNP 305 (332)
T ss_dssp SCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSS
T ss_pred CcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCc
Confidence 9999888888999999999999999998 778889999999999999999998777777653 678999999999
Q ss_pred Cc--ccCCC-CCCCCCcccccccCCc
Q 041689 322 LE--GEIPK-GGSFGNFSAESFEGNK 344 (652)
Q Consensus 322 l~--~~~p~-~~~~~~l~~~~~~~N~ 344 (652)
++ +..|. ...+..++.+++++|.
T Consensus 306 ~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 306 VPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccccccCcccccccchhhhhhccccc
Confidence 87 33332 3566777888887774
No 288
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=6.9e-34 Score=308.57 Aligned_cols=297 Identities=23% Similarity=0.328 Sum_probs=184.8
Q ss_pred CCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccC-----CCccccccCCCCCcccccccCCCCCCcEEEc
Q 041689 27 NPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLS-----SIADNYLTSSTPELSFLSSLSNCKSLVVFLL 101 (652)
Q Consensus 27 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-----~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L 101 (652)
++.+++.|++++|.++. +| .+..+++|++|+|++|.+++.++ .+....+..+.. .....+.++++|++|+|
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~l~~n~l--~~~~~~~~l~~L~~L~L 119 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI--ADITPLANLTNLTGLTL 119 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCC--CCCGGGTTCTTCCEEEC
T ss_pred HhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchhhhccccCCEEECCCCcc--ccChhhcCCCCCCEEEC
Confidence 36799999999999985 45 48899999999999999986653 111112222111 11122556666666666
Q ss_pred ccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccc
Q 041689 102 SNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLE 181 (652)
Q Consensus 102 s~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 181 (652)
++|.++++++ +..+++ |++|++++|++++. + .+..+++|+.|+++ |.+.+.. .+.++++|++|++++|.++
T Consensus 120 ~~n~l~~~~~---~~~l~~-L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 120 FNNQITDIDP---LKNLTN-LNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVS 190 (466)
T ss_dssp CSSCCCCCGG---GTTCTT-CSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred CCCCCCCChH---HcCCCC-CCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCC
Confidence 6666665532 445554 66666666666542 2 24444444444443 2222221 2666777777777777776
Q ss_pred cccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCccCcccccCC
Q 041689 182 GTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSL 261 (652)
Q Consensus 182 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 261 (652)
+. + .+..+++|++|++++|.+++..+ ++.+++|++|++++|.......+..+++|+.|++++|.+++..+ +..+
T Consensus 191 ~~-~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l 264 (466)
T 1o6v_A 191 DI-S-VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGL 264 (466)
T ss_dssp CC-G-GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred CC-h-hhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccchhhhcCCCCCEEECCCCccccchh--hhcC
Confidence 43 2 36677777777777777776554 56667777777777753333456666777777777777765433 6666
Q ss_pred CCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCCCCCCCCccccccc
Q 041689 262 KDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKGGSFGNFSAESFE 341 (652)
Q Consensus 262 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~~~~~ 341 (652)
++|++|++++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|++++|++++..| ...+..++.+++.
T Consensus 265 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~ 339 (466)
T 1o6v_A 265 TKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFY 339 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECC
T ss_pred CCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECC
Confidence 777777777777764433 6666677777777777765443 5666677777777777666555 4455666666666
Q ss_pred CCccCC
Q 041689 342 GNKLLC 347 (652)
Q Consensus 342 ~N~~~c 347 (652)
+|++..
T Consensus 340 ~n~l~~ 345 (466)
T 1o6v_A 340 NNKVSD 345 (466)
T ss_dssp SSCCCC
T ss_pred CCccCC
Confidence 666544
No 289
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.9e-34 Score=305.73 Aligned_cols=293 Identities=18% Similarity=0.184 Sum_probs=258.5
Q ss_pred CCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcc
Q 041689 23 PSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLS 102 (652)
Q Consensus 23 p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls 102 (652)
+..+.+.+++.|++++|.++.+.+..|..+++|++|+|++|+|+++++. .|.++++|++|+|+
T Consensus 39 ~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~-----------------~~~~l~~L~~L~L~ 101 (390)
T 3o6n_A 39 FEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTY-----------------AFAYAHTIQKLYMG 101 (390)
T ss_dssp CSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTT-----------------TTTTCTTCCEEECC
T ss_pred ccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChh-----------------hccCCCCcCEEECC
Confidence 4445679999999999999987777789999999999999999876653 58899999999999
Q ss_pred cCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCcccc
Q 041689 103 NNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEG 182 (652)
Q Consensus 103 ~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 182 (652)
+|.++++++. .+..+++ |++|+|++|+|+.+.+..|.++++|++|+|++|++++..+..|.++++|++|++++|++++
T Consensus 102 ~n~l~~~~~~-~~~~l~~-L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 102 FNAIRYLPPH-VFQNVPL-LTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp SSCCCCCCTT-TTTTCTT-CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred CCCCCcCCHH-HhcCCCC-CCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 9999999887 7888887 9999999999997777778999999999999999998889999999999999999999995
Q ss_pred ccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCCcccCCCCccceEecccccCCccCcccccCC
Q 041689 183 TIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSL 261 (652)
Q Consensus 183 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 261 (652)
. .+..+++|+.|++++|.+++. ...++|++|++++|. ..+|.. ..++|+.|++++|.+++. ..+..+
T Consensus 180 ~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~~~~--~~~~L~~L~l~~n~l~~~--~~l~~l 247 (390)
T 3o6n_A 180 V---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGP--VNVELTILKLQHNNLTDT--AWLLNY 247 (390)
T ss_dssp C---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEEECC--CCSSCCEEECCSSCCCCC--GGGGGC
T ss_pred c---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeecccc--ccccccEEECCCCCCccc--HHHcCC
Confidence 4 366788999999999999854 345689999999997 334433 357899999999999974 688999
Q ss_pred CCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCCCCCCCCccccccc
Q 041689 262 KDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKGGSFGNFSAESFE 341 (652)
Q Consensus 262 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~~~~~ 341 (652)
++|++|+|++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|++++.++....+..++.+++.
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~ 326 (390)
T 3o6n_A 248 PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLD 326 (390)
T ss_dssp TTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECC
T ss_pred CCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcceecCccccccCcCCEEECC
Confidence 999999999999998889999999999999999999984 5667788999999999999999777666778899999999
Q ss_pred CCccCC
Q 041689 342 GNKLLC 347 (652)
Q Consensus 342 ~N~~~c 347 (652)
+|++.-
T Consensus 327 ~N~i~~ 332 (390)
T 3o6n_A 327 HNSIVT 332 (390)
T ss_dssp SSCCCC
T ss_pred CCccce
Confidence 998754
No 290
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=7.5e-34 Score=296.17 Aligned_cols=281 Identities=25% Similarity=0.382 Sum_probs=244.7
Q ss_pred eeeceeEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCC
Q 041689 4 ISIGKLELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPE 83 (652)
Q Consensus 4 ~~l~~l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~ 83 (652)
++|+.|+|+.|.+.. +|..-++++|++|+|++|+++.+ ..|..+++|++|+|++|++++..
T Consensus 66 ~~L~~L~l~~n~i~~---~~~~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n~i~~~~-------------- 126 (347)
T 4fmz_A 66 TNLEYLNLNGNQITD---ISPLSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNISDIS-------------- 126 (347)
T ss_dssp TTCCEEECCSSCCCC---CGGGTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECTTSCCCCCG--------------
T ss_pred CCccEEEccCCcccc---chhhhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEECcCCcccCch--------------
Confidence 578999999998884 55533789999999999999964 46999999999999999997432
Q ss_pred cccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCcc
Q 041689 84 LSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFT 163 (652)
Q Consensus 84 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 163 (652)
.+.++++|++|++++|......+ .+..++. |++|++++|.+.+..+ +..+++|++|++++|.+.+..+
T Consensus 127 -----~~~~l~~L~~L~l~~n~~~~~~~--~~~~l~~-L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~-- 194 (347)
T 4fmz_A 127 -----PLANLTKMYSLNLGANHNLSDLS--PLSNMTG-LNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP-- 194 (347)
T ss_dssp -----GGTTCTTCCEEECTTCTTCCCCG--GGTTCTT-CCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--
T ss_pred -----hhccCCceeEEECCCCCCccccc--chhhCCC-CcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--
Confidence 26789999999999996655444 3677776 9999999999996654 8999999999999999996544
Q ss_pred ccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceE
Q 041689 164 LRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGI 243 (652)
Q Consensus 164 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L 243 (652)
+..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|++|++++|.......+..+++|+.|
T Consensus 195 ~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L 270 (347)
T 4fmz_A 195 LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDINAVKDLTKLKML 270 (347)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEE
T ss_pred ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCChhHhcCCCcCEE
Confidence 8999999999999999996544 8899999999999999997665 89999999999999974445679999999999
Q ss_pred ecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCc
Q 041689 244 DFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLE 323 (652)
Q Consensus 244 ~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 323 (652)
++++|++++. ..+..+++|+.|++++|++++..|..+..+++|+.|+|++|++++..| +..+++|+.|++++|+++
T Consensus 271 ~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 271 NVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp ECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 9999999975 568999999999999999998889999999999999999999997766 889999999999999986
No 291
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.7e-33 Score=291.38 Aligned_cols=287 Identities=20% Similarity=0.182 Sum_probs=232.0
Q ss_pred CCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCcc
Q 041689 29 HNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNG 108 (652)
Q Consensus 29 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 108 (652)
.+++.++++++.++. +|..+. ++|+.|+|++|+|+++++. .|.++++|++|+|++|++++
T Consensus 31 c~l~~l~~~~~~l~~-lp~~~~--~~l~~L~L~~n~i~~~~~~-----------------~~~~l~~L~~L~L~~n~l~~ 90 (330)
T 1xku_A 31 CHLRVVQCSDLGLEK-VPKDLP--PDTALLDLQNNKITEIKDG-----------------DFKNLKNLHTLILINNKISK 90 (330)
T ss_dssp EETTEEECTTSCCCS-CCCSCC--TTCCEEECCSSCCCCBCTT-----------------TTTTCTTCCEEECCSSCCCC
T ss_pred CCCeEEEecCCCccc-cCccCC--CCCeEEECCCCcCCEeChh-----------------hhccCCCCCEEECCCCcCCe
Confidence 378999999999984 666553 6899999999999876552 47889999999999999998
Q ss_pred cCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCcccc--ccCc
Q 041689 109 ILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEG--TIPY 186 (652)
Q Consensus 109 ~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~ 186 (652)
+.|. .+..+++ |++|++++|+|+.+ |..+. ++|++|++++|++++..+..|.++++|++|++++|.++. ..+.
T Consensus 91 ~~~~-~~~~l~~-L~~L~Ls~n~l~~l-~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 165 (330)
T 1xku_A 91 ISPG-AFAPLVK-LERLYLSKNQLKEL-PEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENG 165 (330)
T ss_dssp BCTT-TTTTCTT-CCEEECCSSCCSBC-CSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTT
T ss_pred eCHH-HhcCCCC-CCEEECCCCcCCcc-Chhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChh
Confidence 8777 7888886 99999999999854 44443 789999999999998888889999999999999999964 6778
Q ss_pred cccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC--CCCCcccCCCCccceEecccccCCccCcccccCCCCC
Q 041689 187 DIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND--GPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDL 264 (652)
Q Consensus 187 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~--~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L 264 (652)
.+..+++|++|++++|.++.++...+ ++|++|++++|. ...|..+..+++|+.|++++|.+++..+..|..+++|
T Consensus 166 ~~~~l~~L~~L~l~~n~l~~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 242 (330)
T 1xku_A 166 AFQGMKKLSYIRIADTNITTIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHL 242 (330)
T ss_dssp GGGGCTTCCEEECCSSCCCSCCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTC
T ss_pred hccCCCCcCEEECCCCccccCCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCC
Confidence 88999999999999999986543332 789999999986 3346678889999999999999998877788889999
Q ss_pred cEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCC------CCCceEEeecCcCcc--cC-CCCCCCCCc
Q 041689 265 QYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKL------SYLEHLNLSFNKLEG--EI-PKGGSFGNF 335 (652)
Q Consensus 265 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~L~~N~l~~--~~-p~~~~~~~l 335 (652)
++|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|... ..|+.|++++|++.. .. +....+..+
T Consensus 243 ~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l 321 (330)
T 1xku_A 243 RELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVR 321 (330)
T ss_dssp CEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCG
T ss_pred CEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccce
Confidence 99999999998 778888889999999999999987777777543 678889999998864 22 223456667
Q ss_pred ccccccCCc
Q 041689 336 SAESFEGNK 344 (652)
Q Consensus 336 ~~~~~~~N~ 344 (652)
+.+++++|.
T Consensus 322 ~~l~L~~N~ 330 (330)
T 1xku_A 322 AAVQLGNYK 330 (330)
T ss_dssp GGEEC----
T ss_pred eEEEecccC
Confidence 777777763
No 292
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=7.1e-34 Score=317.87 Aligned_cols=294 Identities=18% Similarity=0.179 Sum_probs=260.5
Q ss_pred CCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcc
Q 041689 23 PSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLS 102 (652)
Q Consensus 23 p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls 102 (652)
+..+.+.+++.|++++|.++.+.+..|.++++|++|+|++|.|+++++. .|.++++|++|+|+
T Consensus 45 ~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~-----------------~~~~l~~L~~L~L~ 107 (597)
T 3oja_B 45 FEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTY-----------------AFAYAHTIQKLYMG 107 (597)
T ss_dssp CSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTT-----------------TTTTCTTCCEEECC
T ss_pred cccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChH-----------------HhcCCCCCCEEECC
Confidence 3445678999999999999988888899999999999999999977663 58899999999999
Q ss_pred cCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCcccc
Q 041689 103 NNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEG 182 (652)
Q Consensus 103 ~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 182 (652)
+|.++++++. .++.++. |++|+|++|+|+++++..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.|++
T Consensus 108 ~n~l~~~~~~-~~~~l~~-L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 108 FNAIRYLPPH-VFQNVPL-LTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp SSCCCCCCTT-TTTTCTT-CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred CCcCCCCCHH-HHcCCCC-CCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 9999999887 7888887 9999999999998888889999999999999999999999999999999999999999996
Q ss_pred ccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCCcccCCCCccceEecccccCCccCcccccCC
Q 041689 183 TIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSL 261 (652)
Q Consensus 183 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 261 (652)
. + +..+++|+.|++++|.+++. ...++|+.|++++|. ..++..+ .++|+.|+|++|.+++ +..+..+
T Consensus 186 ~-~--~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~--~~~L~~L~L~~n~l~~--~~~l~~l 253 (597)
T 3oja_B 186 V-D--LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTD--TAWLLNY 253 (597)
T ss_dssp C-C--GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCCEEECSC--CSCCCEEECCSSCCCC--CGGGGGC
T ss_pred c-C--hhhhhhhhhhhcccCccccc-----cCCchhheeeccCCccccccccc--CCCCCEEECCCCCCCC--ChhhccC
Confidence 4 3 56688999999999999864 345789999999997 3344333 3689999999999997 4789999
Q ss_pred CCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCCCCCCCCccccccc
Q 041689 262 KDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKGGSFGNFSAESFE 341 (652)
Q Consensus 262 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~~~~~ 341 (652)
++|+.|+|++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|++++.++....++.++.++++
T Consensus 254 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~l~~L~~L~L~ 332 (597)
T 3oja_B 254 PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLD 332 (597)
T ss_dssp TTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECC
T ss_pred CCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCCccCcccccCCCCCEEECC
Confidence 999999999999999999999999999999999999995 5777788999999999999999776666778899999999
Q ss_pred CCccCCC
Q 041689 342 GNKLLCG 348 (652)
Q Consensus 342 ~N~~~c~ 348 (652)
+|++...
T Consensus 333 ~N~l~~~ 339 (597)
T 3oja_B 333 HNSIVTL 339 (597)
T ss_dssp SSCCCCC
T ss_pred CCCCCCc
Confidence 9997543
No 293
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=7.4e-33 Score=298.41 Aligned_cols=295 Identities=17% Similarity=0.136 Sum_probs=236.4
Q ss_pred eeeceeEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCC
Q 041689 4 ISIGKLELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPE 83 (652)
Q Consensus 4 ~~l~~l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~ 83 (652)
++|+.|+|+.|.+.. +|..-.+++|++|+|++|+|+++ | |..+++|++|+|++|+|++.
T Consensus 42 ~~L~~L~Ls~n~l~~---~~~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~--------------- 100 (457)
T 3bz5_A 42 ATLTSLDCHNSSITD---MTGIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL--------------- 100 (457)
T ss_dssp TTCCEEECCSSCCCC---CTTGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC---------------
T ss_pred CCCCEEEccCCCccc---ChhhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee---------------
Confidence 468899999998884 56433789999999999999975 4 89999999999999998753
Q ss_pred cccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCcc
Q 041689 84 LSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFT 163 (652)
Q Consensus 84 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 163 (652)
.+.++++|++|+|++|++++++ ++.+++ |++|++++|+++++ + ++.+++|++|++++|+..+.. .
T Consensus 101 -----~~~~l~~L~~L~L~~N~l~~l~----~~~l~~-L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~ 165 (457)
T 3bz5_A 101 -----DVTPLTKLTYLNCDTNKLTKLD----VSQNPL-LTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--D 165 (457)
T ss_dssp -----CCTTCTTCCEEECCSSCCSCCC----CTTCTT-CCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--C
T ss_pred -----ecCCCCcCCEEECCCCcCCeec----CCCCCc-CCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--c
Confidence 1667889999999999998862 567776 99999999999874 3 888999999999999655444 4
Q ss_pred ccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCCcccCCCCccce
Q 041689 164 LRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEIGNLKVLIG 242 (652)
Q Consensus 164 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~~~~~l~~L~~ 242 (652)
+..+++|++|++++|+|++ +| +..+++|+.|++++|++++. .+..+++|++|++++|+ ..+| ++.+++|+.
T Consensus 166 ~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip--~~~l~~L~~ 237 (457)
T 3bz5_A 166 VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEID--VTPLTQLTY 237 (457)
T ss_dssp CTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCCC--CTTCTTCSE
T ss_pred cccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccccC--ccccCCCCE
Confidence 7888999999999999995 45 78888999999999999876 38888999999999997 3455 888899999
Q ss_pred EecccccCCccCcccccCCC-------CCcEEEccCCcCCCcccccccccccCcceeccccccCCCCch--------hhc
Q 041689 243 IDFSMNNFSSVIPTTIGSLK-------DLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPL--------LLE 307 (652)
Q Consensus 243 L~ls~N~l~~~~~~~~~~l~-------~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~--------~~~ 307 (652)
|++++|++++..+..+.+++ +|+.|++++|.+.+.+| +..+++|+.|+|++|.+.+.+|. .+.
T Consensus 238 L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~ 315 (457)
T 3bz5_A 238 FDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLS 315 (457)
T ss_dssp EECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCT
T ss_pred EEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechh
Confidence 99999999987655555554 55666666666665555 56778899999999987665553 255
Q ss_pred CCCCCceEEeecCcCcccCCCCCCCCCcccccccCCccC
Q 041689 308 KLSYLEHLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLL 346 (652)
Q Consensus 308 ~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~~~~~~N~~~ 346 (652)
++++|+.|++++|++++. + ...++.++.+++++|.+.
T Consensus 316 ~~~~L~~L~L~~N~l~~l-~-l~~l~~L~~L~l~~N~l~ 352 (457)
T 3bz5_A 316 QNPKLVYLYLNNTELTEL-D-VSHNTKLKSLSCVNAHIQ 352 (457)
T ss_dssp TCTTCCEEECTTCCCSCC-C-CTTCTTCSEEECCSSCCC
T ss_pred hcccCCEEECCCCccccc-c-cccCCcCcEEECCCCCCC
Confidence 667889999999999885 3 667788888888888775
No 294
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.1e-33 Score=290.56 Aligned_cols=279 Identities=18% Similarity=0.200 Sum_probs=196.0
Q ss_pred CCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCc
Q 041689 28 PHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLN 107 (652)
Q Consensus 28 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 107 (652)
++.....++++|+++. +|..+. ++|++|+|++|+|+++++. .|.++++|++|+|++|+++
T Consensus 30 C~~~~~c~~~~~~l~~-iP~~~~--~~L~~L~l~~n~i~~~~~~-----------------~~~~l~~L~~L~L~~n~l~ 89 (353)
T 2z80_A 30 CDRNGICKGSSGSLNS-IPSGLT--EAVKSLDLSNNRITYISNS-----------------DLQRCVNLQALVLTSNGIN 89 (353)
T ss_dssp ECTTSEEECCSTTCSS-CCTTCC--TTCCEEECTTSCCCEECTT-----------------TTTTCTTCCEEECTTSCCC
T ss_pred CCCCeEeeCCCCCccc-cccccc--ccCcEEECCCCcCcccCHH-----------------HhccCCCCCEEECCCCccC
Confidence 3444557777777763 444443 3677777777777655442 3566777777777777777
Q ss_pred ccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCC-ccccCCCCCcEEecccC-ccccccC
Q 041689 108 GILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIP-FTLRELQKLQYVGLKDN-KLEGTIP 185 (652)
Q Consensus 108 ~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~~ 185 (652)
++.+. .+..+++ |++|+|++|+|+++.+..|.++++|++|+|++|+++++.+ ..|.++++|++|++++| .+++..+
T Consensus 90 ~~~~~-~~~~l~~-L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 167 (353)
T 2z80_A 90 TIEED-SFSSLGS-LEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQR 167 (353)
T ss_dssp EECTT-TTTTCTT-CCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred ccCHh-hcCCCCC-CCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCH
Confidence 66655 5666665 7777777777776555557777777777777777775444 46777777777777777 4665556
Q ss_pred ccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCCcc-cCCCCccceEecccccCCccCccccc---C
Q 041689 186 YDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLE-IGNLKVLIGIDFSMNNFSSVIPTTIG---S 260 (652)
Q Consensus 186 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~~-~~~l~~L~~L~ls~N~l~~~~~~~~~---~ 260 (652)
..|..+++|++|++++|++++..|..|..+++|++|++++|. ..+|.. +..+++|+.|++++|.+++..+..+. .
T Consensus 168 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~ 247 (353)
T 2z80_A 168 KDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGET 247 (353)
T ss_dssp TTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------C
T ss_pred HHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccc
Confidence 667777777777777777777777777777777777777775 333333 34567788888888888776554433 3
Q ss_pred CCCCcEEEccCCcCCC----cccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCC
Q 041689 261 LKDLQYLFLGYNILKG----SIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPK 328 (652)
Q Consensus 261 l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 328 (652)
...++.++|++|.+++ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+++|.+|.
T Consensus 248 ~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 248 NSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp CCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 5678888888888875 3677888899999999999999855555568999999999999999988763
No 295
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.9e-31 Score=287.37 Aligned_cols=287 Identities=18% Similarity=0.167 Sum_probs=227.4
Q ss_pred eeeceeEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCC
Q 041689 4 ISIGKLELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPE 83 (652)
Q Consensus 4 ~~l~~l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~ 83 (652)
++|+.|+|+.|.+.. +| .-++++|++|+|++|+|+++ + |..+++|++|+|++|+++++
T Consensus 64 ~~L~~L~Ls~n~l~~---~~-~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l--------------- 121 (457)
T 3bz5_A 64 TGLTKLICTSNNITT---LD-LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL--------------- 121 (457)
T ss_dssp TTCSEEECCSSCCSC---CC-CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC---------------
T ss_pred CCCCEEEccCCcCCe---Ec-cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee---------------
Confidence 578999999999885 55 22789999999999999975 3 99999999999999999743
Q ss_pred cccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCcc
Q 041689 84 LSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFT 163 (652)
Q Consensus 84 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 163 (652)
.+.++++|++|++++|+++++ .++.++. |++|++++|+..+.+ .+..+++|+.|+|++|+++++ |
T Consensus 122 -----~~~~l~~L~~L~l~~N~l~~l----~l~~l~~-L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~-- 186 (457)
T 3bz5_A 122 -----DVSQNPLLTYLNCARNTLTEI----DVSHNTQ-LTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D-- 186 (457)
T ss_dssp -----CCTTCTTCCEEECTTSCCSCC----CCTTCTT-CCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C--
T ss_pred -----cCCCCCcCCEEECCCCcccee----ccccCCc-CCEEECCCCCccccc--ccccCCcCCEEECCCCcccee-c--
Confidence 156789999999999999986 2556765 999999999655444 488899999999999999964 4
Q ss_pred ccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCC-cccCCCC---
Q 041689 164 LRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLP-LEIGNLK--- 238 (652)
Q Consensus 164 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~-~~~~~l~--- 238 (652)
+..+++|+.|++++|++++. .+..+++|++|++++|+++++ | +..+++|++|++++|. ..+| ..+.++.
T Consensus 187 l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~ 260 (457)
T 3bz5_A 187 VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLH 260 (457)
T ss_dssp CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEE
T ss_pred cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEe
Confidence 88899999999999999964 388889999999999999974 4 8889999999999996 2233 2333333
Q ss_pred ----ccceEecccccCCccCcccccCCCCCcEEEccCCcCCCcccc--------cccccccCcceeccccccCCCCchhh
Q 041689 239 ----VLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPD--------SVGDLISLKSLNFSNNNLSGAIPLLL 306 (652)
Q Consensus 239 ----~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~--------~~~~l~~L~~L~L~~N~l~~~~~~~~ 306 (652)
+|+.|++++|.+.+.+| ++.+++|+.|++++|...+.+|. .+..+++|+.|+|++|+|++. + +
T Consensus 261 l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~--l 335 (457)
T 3bz5_A 261 CIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D--V 335 (457)
T ss_dssp CTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C--C
T ss_pred ccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c--c
Confidence 45566666666665554 56789999999999987666553 356678899999999999974 3 8
Q ss_pred cCCCCCceEEeecCcCcccCCCCCCCCCcccccccCCcc
Q 041689 307 EKLSYLEHLNLSFNKLEGEIPKGGSFGNFSAESFEGNKL 345 (652)
Q Consensus 307 ~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~~~~~~N~~ 345 (652)
..+++|+.|++++|++++. +.+..+.+..|.+
T Consensus 336 ~~l~~L~~L~l~~N~l~~l-------~~L~~L~l~~n~l 367 (457)
T 3bz5_A 336 SHNTKLKSLSCVNAHIQDF-------SSVGKIPALNNNF 367 (457)
T ss_dssp TTCTTCSEEECCSSCCCBC-------TTGGGSSGGGTSE
T ss_pred ccCCcCcEEECCCCCCCCc-------cccccccccCCcE
Confidence 8999999999999999973 2344455555544
No 296
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-32 Score=286.73 Aligned_cols=272 Identities=17% Similarity=0.145 Sum_probs=232.3
Q ss_pred eEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCccccc
Q 041689 9 LELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLS 88 (652)
Q Consensus 9 l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~ 88 (652)
.+++.+.++ ++|..+ .++|++|+|++|+|+++.+..|.++++|++|+|++|+|+++.+.
T Consensus 36 c~~~~~~l~---~iP~~~-~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~----------------- 94 (353)
T 2z80_A 36 CKGSSGSLN---SIPSGL-TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEED----------------- 94 (353)
T ss_dssp EECCSTTCS---SCCTTC-CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTT-----------------
T ss_pred eeCCCCCcc---cccccc-cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHh-----------------
Confidence 455555555 799987 67999999999999988888999999999999999999977653
Q ss_pred ccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCC-ccccCCCCCCEEEecCc-cccccCCccccC
Q 041689 89 SLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIP-EEIGNLTNLTAIYLGGN-KLNGSIPFTLRE 166 (652)
Q Consensus 89 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~ 166 (652)
.|.++++|++|+|++|+++++++. .+..+++ |++|+|++|+++++.+ ..|.++++|++|++++| .+....+..|.+
T Consensus 95 ~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~-L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 172 (353)
T 2z80_A 95 SFSSLGSLEHLDLSYNYLSNLSSS-WFKPLSS-LTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAG 172 (353)
T ss_dssp TTTTCTTCCEEECCSSCCSSCCHH-HHTTCTT-CSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT
T ss_pred hcCCCCCCCEEECCCCcCCcCCHh-HhCCCcc-CCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccC
Confidence 588999999999999999987665 5788886 9999999999997655 58999999999999999 588777889999
Q ss_pred CCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCC-Ccc---cCCCCccc
Q 041689 167 LQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPL-PLE---IGNLKVLI 241 (652)
Q Consensus 167 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~-~~~---~~~l~~L~ 241 (652)
+++|++|++++|++++..|..+..+++|++|++++|+++...+..+..+++|++|++++|. ... +.. ......++
T Consensus 173 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~ 252 (353)
T 2z80_A 173 LTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIK 252 (353)
T ss_dssp CCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCC
T ss_pred CCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhh
Confidence 9999999999999999889999999999999999999987766667779999999999996 222 222 23456778
Q ss_pred eEecccccCCc----cCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCc
Q 041689 242 GIDFSMNNFSS----VIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIP 303 (652)
Q Consensus 242 ~L~ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 303 (652)
.+++++|.+++ .+|..+..+++|++|+|++|+|+...+..|..+++|+.|+|++|++++..|
T Consensus 253 ~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 253 KFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp EEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 88888888875 357789999999999999999995544456999999999999999997654
No 297
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=100.00 E-value=1.4e-31 Score=289.30 Aligned_cols=252 Identities=24% Similarity=0.257 Sum_probs=223.4
Q ss_pred CCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCccc
Q 041689 54 TLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVS 133 (652)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~ 133 (652)
+...++.+++.++.++..+ .++|++|+|++|+|+++.+. .|.++++ |++|+|++|+|+
T Consensus 55 ~~~~v~c~~~~l~~iP~~~--------------------~~~l~~L~L~~n~i~~~~~~-~~~~l~~-L~~L~Ls~n~i~ 112 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGI--------------------PSNTRYLNLMENNIQMIQAD-TFRHLHH-LEVLQLGRNSIR 112 (452)
T ss_dssp SSCEEECCSSCCSSCCSCC--------------------CTTCSEEECCSSCCCEECTT-TTTTCTT-CCEEECCSSCCC
T ss_pred CCcEEEECCCCcCccCCCC--------------------CCCccEEECcCCcCceECHH-HcCCCCC-CCEEECCCCccC
Confidence 4567888888887655431 25789999999999998877 7888887 999999999999
Q ss_pred ccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccccCCCCCcEEEccC-CcccccccccC
Q 041689 134 GGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGG-NKLSGSILTCF 212 (652)
Q Consensus 134 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~ 212 (652)
++.+..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|..+++|++|+|++ |.+..+.+..|
T Consensus 113 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~ 192 (452)
T 3zyi_A 113 QIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAF 192 (452)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTT
T ss_pred CcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhc
Confidence 98889999999999999999999988888899999999999999999977777899999999999998 67777777789
Q ss_pred CCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCccee
Q 041689 213 SNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLN 292 (652)
Q Consensus 213 ~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 292 (652)
..+++|++|+|++|.......+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+
T Consensus 193 ~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 272 (452)
T 3zyi_A 193 EGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELN 272 (452)
T ss_dssp TTCTTCCEEECTTSCCSSCCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCCCCEEECCCCcccccccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEE
Confidence 99999999999999744445688999999999999999999999999999999999999999988899999999999999
Q ss_pred ccccccCCCCchhhcCCCCCceEEeecCcCcccCC
Q 041689 293 FSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIP 327 (652)
Q Consensus 293 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 327 (652)
|++|+|++..+..|..+++|+.|+|++|++.|.+.
T Consensus 273 L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 273 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 99999998888889999999999999999998765
No 298
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.98 E-value=1.9e-31 Score=287.15 Aligned_cols=231 Identities=26% Similarity=0.291 Sum_probs=154.5
Q ss_pred CCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEe
Q 041689 95 SLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVG 174 (652)
Q Consensus 95 ~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 174 (652)
+++.|+|++|+|+++.+. .|.++++ |++|+|++|+|+++.+..|.++++|++|+|++|+|+.+.+..|..+++|++|+
T Consensus 65 ~l~~L~L~~n~i~~~~~~-~~~~l~~-L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 142 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVN-SFKHLRH-LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELW 142 (440)
T ss_dssp TCSEEECCSCCCCEECTT-TTSSCSS-CCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEE
T ss_pred CCcEEEccCCcCCeeCHH-HhhCCCC-CCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceee
Confidence 344444444444444433 3444443 55555555555544445555555555555555555544444555555555555
Q ss_pred cccCccccccCccccCCCCCcEEEccC-CcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCcc
Q 041689 175 LKDNKLEGTIPYDIFRLVKLYKLDLGG-NKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSV 253 (652)
Q Consensus 175 L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~ 253 (652)
|++|+|+...+..|..+++|++|+|++ |.+..+.+..|.++++|++|+|++|.......+..+++|+.|+|++|+++++
T Consensus 143 L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 143 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCCCTTCSSCCEEECTTSCCCEE
T ss_pred CCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccccccCCCcccCEEECCCCccCcc
Confidence 555555544444555555556666655 3444444445666666666666666522223467778888888888888888
Q ss_pred CcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCC
Q 041689 254 IPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIP 327 (652)
Q Consensus 254 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 327 (652)
.|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.|.+.
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 88899999999999999999998888889999999999999999998888888889999999999999987654
No 299
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.98 E-value=2.4e-32 Score=279.51 Aligned_cols=273 Identities=20% Similarity=0.198 Sum_probs=234.2
Q ss_pred CEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCccccc
Q 041689 56 KDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGG 135 (652)
Q Consensus 56 ~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~ 135 (652)
+.++.+++.++.++.. + .++|++|+|++|+++.+++. .+..+++ |++|+|++|+++..
T Consensus 10 ~~l~c~~~~l~~ip~~------------------~--~~~l~~L~L~~n~l~~i~~~-~~~~l~~-L~~L~L~~n~l~~~ 67 (306)
T 2z66_A 10 TEIRCNSKGLTSVPTG------------------I--PSSATRLELESNKLQSLPHG-VFDKLTQ-LTKLSLSSNGLSFK 67 (306)
T ss_dssp TEEECCSSCCSSCCSC------------------C--CTTCCEEECCSSCCCCCCTT-TTTTCTT-CSEEECCSSCCCEE
T ss_pred CEEEcCCCCcccCCCC------------------C--CCCCCEEECCCCccCccCHh-Hhhcccc-CCEEECCCCccCcc
Confidence 4678888888755442 1 25799999999999987765 6788886 99999999999844
Q ss_pred --CCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccC-ccccCCCCCcEEEccCCcccccccccC
Q 041689 136 --IPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIP-YDIFRLVKLYKLDLGGNKLSGSILTCF 212 (652)
Q Consensus 136 --~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~ 212 (652)
.+..+..+++|++|+|++|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..+..|
T Consensus 68 ~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 146 (306)
T 2z66_A 68 GCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF 146 (306)
T ss_dssp EEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTT
T ss_pred cCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhc
Confidence 3677888999999999999998 466679999999999999999996655 578999999999999999999999999
Q ss_pred CCCCCCCEEEccCCCC---CCCcccCCCCccceEecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCc
Q 041689 213 SNLASLRTLSLSYNDG---PLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLK 289 (652)
Q Consensus 213 ~~l~~L~~L~Ls~N~~---~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 289 (652)
..+++|++|++++|.. ..|..+..+++|+.|++++|++++..|..|..+++|++|+|++|++++..+..+..+++|+
T Consensus 147 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 226 (306)
T 2z66_A 147 NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 226 (306)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCC
T ss_pred ccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCC
Confidence 9999999999999962 4788899999999999999999998899999999999999999999988777899999999
Q ss_pred ceeccccccCCCCchhhcCCC-CCceEEeecCcCcccCCCC---CCCCCcccccccCCccCCCCCC
Q 041689 290 SLNFSNNNLSGAIPLLLEKLS-YLEHLNLSFNKLEGEIPKG---GSFGNFSAESFEGNKLLCGSPN 351 (652)
Q Consensus 290 ~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~---~~~~~l~~~~~~~N~~~c~~~~ 351 (652)
.|+|++|++++..|..+..++ +|+.|+|++|+++|.++.. ..+...+.+.+..+...|..|.
T Consensus 227 ~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 227 VLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp EEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred EeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCch
Confidence 999999999999999999985 9999999999999876532 1222334455667888888764
No 300
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.98 E-value=7e-32 Score=276.06 Aligned_cols=278 Identities=22% Similarity=0.222 Sum_probs=165.1
Q ss_pred ceeEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCccc
Q 041689 7 GKLELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSF 86 (652)
Q Consensus 7 ~~l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~ 86 (652)
+.++.+.+.++ ++|..+ +++|++|+|++|+++.+.+..|.++++|++|+|++|+|+.... .
T Consensus 10 ~~l~c~~~~l~---~ip~~~-~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~---------------~ 70 (306)
T 2z66_A 10 TEIRCNSKGLT---SVPTGI-PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGC---------------C 70 (306)
T ss_dssp TEEECCSSCCS---SCCSCC-CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEE---------------E
T ss_pred CEEEcCCCCcc---cCCCCC-CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccC---------------c
Confidence 34445554444 566665 5677777777777775555556777777777777777653210 0
Q ss_pred ccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCC-ccccCCCCCCEEEecCccccccCCcccc
Q 041689 87 LSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIP-EEIGNLTNLTAIYLGGNKLNGSIPFTLR 165 (652)
Q Consensus 87 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 165 (652)
...+..+++|++|+|++|.++++++ .+..+++ |++|++++|++++..+ ..|..+++|++|+|++|.+.+..+..|.
T Consensus 71 ~~~~~~~~~L~~L~Ls~n~i~~l~~--~~~~l~~-L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 147 (306)
T 2z66_A 71 SQSDFGTTSLKYLDLSFNGVITMSS--NFLGLEQ-LEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 147 (306)
T ss_dssp EHHHHSCSCCCEEECCSCSEEEEEE--EEETCTT-CCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTT
T ss_pred ccccccccccCEEECCCCccccChh--hcCCCCC-CCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcc
Confidence 0123345666666666666665433 2444444 6666666666654443 4555566666666666666555555555
Q ss_pred CCCCCcEEecccCcccc-ccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEe
Q 041689 166 ELQKLQYVGLKDNKLEG-TIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGID 244 (652)
Q Consensus 166 ~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ 244 (652)
++++|++|+|++|.+++ ..|..+..+++|++|+|++|++++..+..| ..+++|+.|+
T Consensus 148 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~----------------------~~l~~L~~L~ 205 (306)
T 2z66_A 148 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF----------------------NSLSSLQVLN 205 (306)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT----------------------TTCTTCCEEE
T ss_pred cCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHh----------------------cCCCCCCEEE
Confidence 55666666666665554 345555555555555555555555444444 4455555555
Q ss_pred cccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccc-cCcceeccccccCCCCc--hhhcCCCCCceEEeecCc
Q 041689 245 FSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLI-SLKSLNFSNNNLSGAIP--LLLEKLSYLEHLNLSFNK 321 (652)
Q Consensus 245 ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~L~~N~ 321 (652)
+++|++++..+..|..+++|++|+|++|++++..|..+..++ +|+.|+|++|++++..+ .....+...+.+....+.
T Consensus 206 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~ 285 (306)
T 2z66_A 206 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVER 285 (306)
T ss_dssp CTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGG
T ss_pred CCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccc
Confidence 566666666666677777777888888877777777777774 78888888887765322 112223344555566677
Q ss_pred CcccCCC
Q 041689 322 LEGEIPK 328 (652)
Q Consensus 322 l~~~~p~ 328 (652)
+.|..|.
T Consensus 286 ~~C~~p~ 292 (306)
T 2z66_A 286 MECATPS 292 (306)
T ss_dssp CBEEESG
T ss_pred cccCCch
Confidence 7776654
No 301
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=8.1e-32 Score=272.66 Aligned_cols=251 Identities=23% Similarity=0.190 Sum_probs=225.2
Q ss_pred CcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEec
Q 041689 96 LVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGL 175 (652)
Q Consensus 96 L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 175 (652)
-+.++.+++.++.++.. ++.+|++|++++|+|+++.+..|..+++|++|+|++|+++++.|..|.++++|++|+|
T Consensus 13 ~~~~~c~~~~l~~ip~~-----~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 87 (285)
T 1ozn_A 13 KVTTSCPQQGLQAVPVG-----IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDL 87 (285)
T ss_dssp SCEEECCSSCCSSCCTT-----CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CeEEEcCcCCcccCCcC-----CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeC
Confidence 37899999999987543 2446999999999999988899999999999999999999888999999999999999
Q ss_pred ccCc-cccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCC-cccCCCCccceEecccccCCc
Q 041689 176 KDNK-LEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLP-LEIGNLKVLIGIDFSMNNFSS 252 (652)
Q Consensus 176 ~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~-~~~~~l~~L~~L~ls~N~l~~ 252 (652)
++|. ++...|..|..+++|++|++++|++++..+..|..+++|++|++++|. ..++ ..++.+++|+.|++++|++++
T Consensus 88 ~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 167 (285)
T 1ozn_A 88 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS 167 (285)
T ss_dssp CSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccc
Confidence 9997 887778899999999999999999999989999999999999999997 4444 448999999999999999998
Q ss_pred cCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCCCCCC
Q 041689 253 VIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKGGSF 332 (652)
Q Consensus 253 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 332 (652)
+.+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|++.|..+....+
T Consensus 168 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~ 247 (285)
T 1ozn_A 168 VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLW 247 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHH
T ss_pred cCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHH
Confidence 88888999999999999999999888999999999999999999999888888999999999999999999887655445
Q ss_pred CCcccccccCCccCCCCCC
Q 041689 333 GNFSAESFEGNKLLCGSPN 351 (652)
Q Consensus 333 ~~l~~~~~~~N~~~c~~~~ 351 (652)
..++......+.+.|..|.
T Consensus 248 ~~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 248 AWLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp HHHHHCCSEECCCBEEESG
T ss_pred HHHHhcccccCccccCCch
Confidence 5666677788888898764
No 302
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.97 E-value=1.2e-30 Score=280.83 Aligned_cols=280 Identities=26% Similarity=0.284 Sum_probs=143.6
Q ss_pred CCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCC---ccccccCCCCCcccccccCCCCCCcEEEcccCC
Q 041689 29 HNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSI---ADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNP 105 (652)
Q Consensus 29 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~---~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~ 105 (652)
++|++|+|++|++++ +| .|.++++|++|++++|++++++... ....+..+... .+..+.++++|++|++++|+
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~~~~~L~~L~L~~n~l~--~l~~~~~l~~L~~L~l~~N~ 206 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNS 206 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCCCcccccEEECcCCcCC--cCccccCCCCCCEEECCCCc
Confidence 578888888888886 55 5888888888888888887644321 11122222111 12245666666666666666
Q ss_pred CcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccC
Q 041689 106 LNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIP 185 (652)
Q Consensus 106 l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 185 (652)
+++++.. +.+|++|++++|+++ .+| .|..+++|++|++++|++++ +|.. +++|++|++++|++++ +|
T Consensus 207 l~~l~~~------~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~ 273 (454)
T 1jl5_A 207 LKKLPDL------PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LP 273 (454)
T ss_dssp CSSCCCC------CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CC
T ss_pred CCcCCCC------cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cC
Confidence 6654321 123666666666666 344 26666666666666666664 2321 3566666666666663 34
Q ss_pred ccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCC-CccceEecccccCCccCcccccCCCCC
Q 041689 186 YDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNL-KVLIGIDFSMNNFSSVIPTTIGSLKDL 264 (652)
Q Consensus 186 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l-~~L~~L~ls~N~l~~~~~~~~~~l~~L 264 (652)
.. .++|++|++++|+++++. . -.++|++|++++|.... +..+ ++|+.|++++|++++ +|.. +++|
T Consensus 274 ~~---~~~L~~L~ls~N~l~~l~-~---~~~~L~~L~l~~N~l~~---i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L 339 (454)
T 1jl5_A 274 EL---PQSLTFLDVSENIFSGLS-E---LPPNLYYLNASSNEIRS---LCDLPPSLEELNVSNNKLIE-LPAL---PPRL 339 (454)
T ss_dssp CC---CTTCCEEECCSSCCSEES-C---CCTTCCEEECCSSCCSE---ECCCCTTCCEEECCSSCCSC-CCCC---CTTC
T ss_pred cc---cCcCCEEECcCCccCccc-C---cCCcCCEEECcCCcCCc---ccCCcCcCCEEECCCCcccc-cccc---CCcC
Confidence 32 256666666666666532 1 12466666666664211 1122 366677777777765 3332 4667
Q ss_pred cEEEccCCcCCCcccccccccccCcceeccccccCC--CCchhhcCC-------------CCCceEEeecCcCcc--cCC
Q 041689 265 QYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSG--AIPLLLEKL-------------SYLEHLNLSFNKLEG--EIP 327 (652)
Q Consensus 265 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l-------------~~L~~L~L~~N~l~~--~~p 327 (652)
+.|++++|+++ .+|. .+++|+.|+|++|++++ .+|..+..+ ++|+.|++++|++++ .+|
T Consensus 340 ~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP 415 (454)
T 1jl5_A 340 ERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIP 415 (454)
T ss_dssp CEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC-----------------------------
T ss_pred CEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccch
Confidence 77777777776 3444 35667777777777766 556666555 566666666666665 333
Q ss_pred CCCCCCCcccccccCCccCCC
Q 041689 328 KGGSFGNFSAESFEGNKLLCG 348 (652)
Q Consensus 328 ~~~~~~~l~~~~~~~N~~~c~ 348 (652)
. .++.+.+.+|.+.|.
T Consensus 416 ~-----sl~~L~~~~~~~~~~ 431 (454)
T 1jl5_A 416 E-----SVEDLRMNSERVVDP 431 (454)
T ss_dssp ---------------------
T ss_pred h-----hHhheeCcCcccCCc
Confidence 2 234444555555444
No 303
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.97 E-value=2.3e-30 Score=278.74 Aligned_cols=296 Identities=30% Similarity=0.323 Sum_probs=209.0
Q ss_pred eeceeEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccC---CCccccccCCC
Q 041689 5 SIGKLELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLS---SIADNYLTSST 81 (652)
Q Consensus 5 ~l~~l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~~l~~~~ 81 (652)
+++.|+++.|.++ .+|.. +++|++|++++|++++ +|.. +++|++|++++|+++++.. .+....+..+.
T Consensus 72 ~l~~L~l~~~~l~---~lp~~--~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~ 142 (454)
T 1jl5_A 72 QAHELELNNLGLS---SLPEL--PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQ 142 (454)
T ss_dssp TCSEEECTTSCCS---CCCSC--CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCSCCTTCCEEECCSSC
T ss_pred CCCEEEecCCccc---cCCCC--cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccCCCCCCCEEECcCCC
Confidence 4688899999877 46663 5789999999999997 5543 4789999999999886432 33333343333
Q ss_pred CCcccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCC
Q 041689 82 PELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIP 161 (652)
Q Consensus 82 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 161 (652)
.. .+..|.++++|++|++++|++++++.. +.+|++|++++|++++ +| .|.++++|++|++++|++++ +|
T Consensus 143 l~--~lp~~~~l~~L~~L~l~~N~l~~lp~~------~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~ 211 (454)
T 1jl5_A 143 LE--KLPELQNSSFLKIIDVDNNSLKKLPDL------PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LP 211 (454)
T ss_dssp CS--SCCCCTTCTTCCEEECCSSCCSCCCCC------CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CC
T ss_pred CC--CCcccCCCCCCCEEECCCCcCcccCCC------cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CC
Confidence 22 123588999999999999999876432 1259999999999997 45 58999999999999999986 44
Q ss_pred ccccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCCcccCCCCcc
Q 041689 162 FTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEIGNLKVL 240 (652)
Q Consensus 162 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~~~~~l~~L 240 (652)
... ++|++|++++|+++ .+| .+..+++|++|++++|++++++ . .+++|++|++++|. ..+|.. +++|
T Consensus 212 ~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~-~---~~~~L~~L~l~~N~l~~l~~~---~~~L 279 (454)
T 1jl5_A 212 DLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLP-D---LPPSLEALNVRDNYLTDLPEL---PQSL 279 (454)
T ss_dssp CCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCC-S---CCTTCCEEECCSSCCSCCCCC---CTTC
T ss_pred CCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCccc-c---cccccCEEECCCCcccccCcc---cCcC
Confidence 332 58999999999998 667 4888999999999999998643 3 24788999999986 344543 3678
Q ss_pred ceEecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecC
Q 041689 241 IGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFN 320 (652)
Q Consensus 241 ~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 320 (652)
+.|++++|+++++. .. .++|+.|++++|++++ ++.. .++|+.|++++|++++ +|.. +++|+.|++++|
T Consensus 280 ~~L~ls~N~l~~l~-~~---~~~L~~L~l~~N~l~~-i~~~---~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N 347 (454)
T 1jl5_A 280 TFLDVSENIFSGLS-EL---PPNLYYLNASSNEIRS-LCDL---PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFN 347 (454)
T ss_dssp CEEECCSSCCSEES-CC---CTTCCEEECCSSCCSE-ECCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSS
T ss_pred CEEECcCCccCccc-Cc---CCcCCEEECcCCcCCc-ccCC---cCcCCEEECCCCcccc-cccc---CCcCCEEECCCC
Confidence 88888888888632 11 1466677777776663 2211 1366677777777764 3432 456667777777
Q ss_pred cCcccCCCCCCCCCcccccccCCccCC
Q 041689 321 KLEGEIPKGGSFGNFSAESFEGNKLLC 347 (652)
Q Consensus 321 ~l~~~~p~~~~~~~l~~~~~~~N~~~c 347 (652)
.+++ +|. .+..++.+++++|++.+
T Consensus 348 ~l~~-lp~--~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 348 HLAE-VPE--LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CCSC-CCC--CCTTCCEEECCSSCCSS
T ss_pred cccc-ccc--hhhhccEEECCCCCCCc
Confidence 7664 333 35566666666666655
No 304
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=7.1e-31 Score=282.69 Aligned_cols=245 Identities=19% Similarity=0.200 Sum_probs=157.1
Q ss_pred CCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCcccC
Q 041689 31 LEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNGIL 110 (652)
Q Consensus 31 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 110 (652)
...++.++++++ .+|..+. ++++.|+|++|+|+++.+. .|.++++|++|+|++|+|+++.
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~-----------------~~~~l~~L~~L~Ls~n~i~~i~ 104 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVN-----------------SFKHLRHLEILQLSRNHIRTIE 104 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTT-----------------TTSSCSSCCEEECCSSCCCEEC
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHH-----------------HhhCCCCCCEEECCCCcCCccC
Confidence 445566666665 3444332 4566666666666544431 3555566666666666666555
Q ss_pred CccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEeccc-CccccccCcccc
Q 041689 111 PRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKD-NKLEGTIPYDIF 189 (652)
Q Consensus 111 ~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~ 189 (652)
+. .|.++++ |++|+|++|+|+++.+..|..+++|++|+|++|+|+.+.+..|.++++|++|+|++ |.++...+..|.
T Consensus 105 ~~-~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~ 182 (440)
T 3zyj_A 105 IG-AFNGLAN-LNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFE 182 (440)
T ss_dssp GG-GGTTCSS-CCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTT
T ss_pred hh-hccCCcc-CCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhh
Confidence 44 4555554 66666666666655555566666666666666666655555666666666666665 334433334555
Q ss_pred CCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC--CCCCcccCCCCccceEecccccCCccCcccccCCCCCcEE
Q 041689 190 RLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND--GPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYL 267 (652)
Q Consensus 190 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~--~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L 267 (652)
.+++|++|+|++|+++.++ .+..+++|++|+|++|. ...|..|.++++|+.|+|++|+++++.+..|.++++|+.|
T Consensus 183 ~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 260 (440)
T 3zyj_A 183 GLSNLRYLNLAMCNLREIP--NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEI 260 (440)
T ss_dssp TCSSCCEEECTTSCCSSCC--CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEE
T ss_pred cccccCeecCCCCcCcccc--ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEE
Confidence 6666666666666665332 35566666666666664 2235556677777777777888888888888888999999
Q ss_pred EccCCcCCCcccccccccccCcceeccccccC
Q 041689 268 FLGYNILKGSIPDSVGDLISLKSLNFSNNNLS 299 (652)
Q Consensus 268 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 299 (652)
+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 261 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 261 NLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp ECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 99999998877788888899999999999886
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=8.5e-31 Score=283.07 Aligned_cols=207 Identities=20% Similarity=0.189 Sum_probs=119.7
Q ss_pred cCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCC
Q 041689 90 LSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQK 169 (652)
Q Consensus 90 l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 169 (652)
|.++++|++|+|++|+|+++.+. .|.++++ |++|+|++|+|+++.+..|.++++|++|+|++|+|+.+.+..|.++++
T Consensus 95 ~~~l~~L~~L~Ls~n~i~~~~~~-~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 172 (452)
T 3zyi_A 95 FRHLHHLEVLQLGRNSIRQIEVG-AFNGLAS-LNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPS 172 (452)
T ss_dssp TTTCTTCCEEECCSSCCCEECTT-TTTTCTT-CCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTT
T ss_pred cCCCCCCCEEECCCCccCCcChh-hccCccc-CCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCc
Confidence 44444444455554444444443 3444443 555555555554444444555555555555555555444444555555
Q ss_pred CcEEeccc-CccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC--CCCCcccCCCCccceEecc
Q 041689 170 LQYVGLKD-NKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND--GPLPLEIGNLKVLIGIDFS 246 (652)
Q Consensus 170 L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~--~~~~~~~~~l~~L~~L~ls 246 (652)
|++|+|++ |.++...+..|..+++|++|+|++|+++++ ..+..+++|++|+|++|. ...|..|.++++|+.|+++
T Consensus 173 L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 250 (452)
T 3zyi_A 173 LMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM--PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVM 250 (452)
T ss_dssp CCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC--CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECT
T ss_pred ccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc--ccccccccccEEECcCCcCcccCcccccCccCCCEEEeC
Confidence 55555554 333323333444455555555555555433 124455555555555553 2234445566666666677
Q ss_pred cccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCC
Q 041689 247 MNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSG 300 (652)
Q Consensus 247 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 300 (652)
+|+++++.+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 251 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 251 NSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 777777778888888888888888888887777778888888888888888763
No 306
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=1.1e-30 Score=264.17 Aligned_cols=184 Identities=29% Similarity=0.334 Sum_probs=96.0
Q ss_pred cCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCc-ccccCCccccCCCCCCEEEecCccccccCCccccCCC
Q 041689 90 LSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCN-VSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQ 168 (652)
Q Consensus 90 l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 168 (652)
|.++++|++|+|++|.++++.+. .+..+++ |++|++++|+ ++...+..|..+++|++|+|++|++++..|..|.+++
T Consensus 52 ~~~~~~L~~L~l~~n~l~~~~~~-~~~~l~~-L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 129 (285)
T 1ozn_A 52 FRACRNLTILWLHSNVLARIDAA-AFTGLAL-LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLA 129 (285)
T ss_dssp TTTCTTCCEEECCSSCCCEECTT-TTTTCTT-CCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCT
T ss_pred cccCCCCCEEECCCCccceeCHh-hcCCccC-CCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCc
Confidence 44445555555555555544443 3444443 5555555554 5544455555566666666666666555555566666
Q ss_pred CCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC--CCCCcccCCCCccceEecc
Q 041689 169 KLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND--GPLPLEIGNLKVLIGIDFS 246 (652)
Q Consensus 169 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~--~~~~~~~~~l~~L~~L~ls 246 (652)
+|++|+|++|++++..+..|..+++|++|+|++|+++++.+..|..+++|++|++++|. ...|..+..+++|+.|+++
T Consensus 130 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 209 (285)
T 1ozn_A 130 ALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLF 209 (285)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCC
Confidence 66666666666664444455566666666666666665555555555555555544442 1112233333334444444
Q ss_pred cccCCccCcccccCCCCCcEEEccCCcCC
Q 041689 247 MNNFSSVIPTTIGSLKDLQYLFLGYNILK 275 (652)
Q Consensus 247 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 275 (652)
+|++++..+..+..+++|+.|++++|++.
T Consensus 210 ~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 210 ANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp SSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred CCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 44444444444555555555555555544
No 307
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.97 E-value=3.4e-32 Score=279.68 Aligned_cols=247 Identities=21% Similarity=0.216 Sum_probs=173.8
Q ss_pred CCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCC
Q 041689 27 NPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPL 106 (652)
Q Consensus 27 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 106 (652)
.+++|++|+|++|+|+++.|..|..+++|++|+|++|++++.++ |..+++|++|+|++|++
T Consensus 32 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-------------------~~~l~~L~~L~Ls~n~l 92 (317)
T 3o53_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-------------------LESLSTLRTLDLNNNYV 92 (317)
T ss_dssp TGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-------------------ETTCTTCCEEECCSSEE
T ss_pred cCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-------------------hhhcCCCCEEECcCCcc
Confidence 35688888888888887777788888888888888888875432 56778888888888888
Q ss_pred cccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCc
Q 041689 107 NGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPY 186 (652)
Q Consensus 107 ~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 186 (652)
+++++. + +|++|++++|+|++..+.. +++|++|+|++|++++..+..|..+++|++|+|++|++++..+.
T Consensus 93 ~~l~~~------~-~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 162 (317)
T 3o53_A 93 QELLVG------P-SIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA 162 (317)
T ss_dssp EEEEEC------T-TCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGG
T ss_pred ccccCC------C-CcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHH
Confidence 765432 3 3888888888887665543 46778888888888777677777777778888887777766666
Q ss_pred ccc-CCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCccCcccccCCCCCc
Q 041689 187 DIF-RLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQ 265 (652)
Q Consensus 187 ~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~ 265 (652)
.+. .+++|++|+|++|+|++.... ..+++|+.|++++|+++++. ..|..+++|+
T Consensus 163 ~~~~~l~~L~~L~L~~N~l~~~~~~------------------------~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~L~ 217 (317)
T 3o53_A 163 ELAASSDTLEHLNLQYNFIYDVKGQ------------------------VVFAKLKTLDLSSNKLAFMG-PEFQSAAGVT 217 (317)
T ss_dssp GGGGGTTTCCEEECTTSCCCEEECC------------------------CCCTTCCEEECCSSCCCEEC-GGGGGGTTCS
T ss_pred HHhhccCcCCEEECCCCcCcccccc------------------------cccccCCEEECCCCcCCcch-hhhcccCccc
Confidence 654 567777777777777654221 12445555555666666543 3466777777
Q ss_pred EEEccCCcCCCcccccccccccCcceeccccccC-CCCchhhcCCCCCceEEee-cCcCcccCCC
Q 041689 266 YLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLS-GAIPLLLEKLSYLEHLNLS-FNKLEGEIPK 328 (652)
Q Consensus 266 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~-~N~l~~~~p~ 328 (652)
+|+|++|+|+ .+|..+..+++|+.|+|++|+++ +..|..+..+++|+.|+++ .+.+++..|.
T Consensus 218 ~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 218 WISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp EEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred EEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 7777777777 45666777777777777777776 5666777777777777777 4455555554
No 308
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.97 E-value=3.2e-32 Score=279.90 Aligned_cols=259 Identities=18% Similarity=0.114 Sum_probs=155.2
Q ss_pred CCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCcccC
Q 041689 31 LEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNGIL 110 (652)
Q Consensus 31 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 110 (652)
++.++++.+++....+..+..+++|++|+|++|+|++..+ ..|.++++|++|+|++|++++..
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~-----------------~~~~~l~~L~~L~Ls~n~l~~~~ 74 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISA-----------------ADLAPFTKLELLNLSSNVLYETL 74 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCH-----------------HHHTTCTTCCEEECTTSCCEEEE
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCH-----------------HHhhCCCcCCEEECCCCcCCcch
Confidence 4444555555554444444555555555555555553322 13445555555555555555443
Q ss_pred CccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccccC
Q 041689 111 PRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFR 190 (652)
Q Consensus 111 ~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 190 (652)
+ +..+++ |++|++++|+|+++. ..++|++|++++|++++..+.. +++|++|++++|++++..+..+..
T Consensus 75 ~---~~~l~~-L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~ 142 (317)
T 3o53_A 75 D---LESLST-LRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGC 142 (317)
T ss_dssp E---ETTCTT-CCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGG
T ss_pred h---hhhcCC-CCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhc
Confidence 2 334443 555555555555322 1245555555555554333322 334455555555555444444444
Q ss_pred CCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCccCcccccCCCCCcEEEcc
Q 041689 191 LVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLG 270 (652)
Q Consensus 191 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~ 270 (652)
+++|++|+|++|++++..+..+ +..+++|+.|++++|.+++. + ....+++|++|+|+
T Consensus 143 l~~L~~L~Ls~N~l~~~~~~~~---------------------~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls 199 (317)
T 3o53_A 143 RSRVQYLDLKLNEIDTVNFAEL---------------------AASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLS 199 (317)
T ss_dssp GSSEEEEECTTSCCCEEEGGGG---------------------GGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECC
T ss_pred cCCCCEEECCCCCCCcccHHHH---------------------hhccCcCCEEECCCCcCccc-c-cccccccCCEEECC
Confidence 4455555555554444333332 13456677777777777765 2 33358999999999
Q ss_pred CCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcc-cCCC-CCCCCCcccccccCC
Q 041689 271 YNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEG-EIPK-GGSFGNFSAESFEGN 343 (652)
Q Consensus 271 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~-~~~~~~l~~~~~~~N 343 (652)
+|+|++ +|..+..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|+++| .+|. ...++.++.+++.++
T Consensus 200 ~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~ 272 (317)
T 3o53_A 200 SNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTV 272 (317)
T ss_dssp SSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCc
Confidence 999995 4556999999999999999999 578889999999999999999993 3332 245666777777744
No 309
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97 E-value=1.5e-31 Score=294.75 Aligned_cols=209 Identities=18% Similarity=0.063 Sum_probs=145.2
Q ss_pred eeccccceEEEEEEe-CCCcEEEEEEeecc----------cchhhhhHHHHHHHHHhc-CCCeeeeEEeeeecCCceEEE
Q 041689 432 LIGKGGFGTIYKSRI-GDGMEVAVKVFHLQ----------CGRAFKSFDIECEIMKSI-HYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 432 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 499 (652)
..+.|++|.+..++. -.|+.||||++... .....+++.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 355666666666542 35889999999654 123456799999999999 799999999999999999999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|||++|++|.+++...+ .++.. +|+.||+.||+|+|++ |||||||||+|||++++|.+||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~- 392 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD- 392 (569)
T ss_dssp EECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC-
Confidence 99999999999998765 56654 4889999999999999 9999999999999999999999999999865322
Q ss_pred CccccccccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCC----------cchhhhhhhcccchhhhccccCc
Q 041689 580 QSMTQTQTLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQ----------CVSFVFNLAMECTIESLELRINA 649 (652)
Q Consensus 580 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p----------~~~~l~~l~~~~l~~~p~~Rpt~ 649 (652)
.......+||+.|||||++.+ .+..++|+||+|++++++.++..+ .......+...+...+|..||..
T Consensus 393 -~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 470 (569)
T 4azs_A 393 -CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNWLYAVWQEPVERWNFVLLLALFEKKAKLPSAEQ 470 (569)
T ss_dssp --CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHHHHHHHTSCGGGCSHHHHHHHHHTGGGSCCGGG
T ss_pred -CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchhHHHhhcCCCCCCcHHHHHHHHhCCCCCCCCCh
Confidence 223345679999999999865 567789999999998887655443 33334556666667777777765
Q ss_pred c
Q 041689 650 K 650 (652)
Q Consensus 650 ~ 650 (652)
.
T Consensus 471 ~ 471 (569)
T 4azs_A 471 Q 471 (569)
T ss_dssp S
T ss_pred h
Confidence 4
No 310
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=4.8e-30 Score=264.59 Aligned_cols=226 Identities=19% Similarity=0.244 Sum_probs=208.6
Q ss_pred CCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcE
Q 041689 93 CKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQY 172 (652)
Q Consensus 93 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 172 (652)
..+++.|+|++|.++.+++ .++.+++ |++|+|++|+|+ .+|..|.++++|++|+|++|+++ .+|..|.++++|++
T Consensus 80 ~~~l~~L~L~~n~l~~lp~--~l~~l~~-L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~ 154 (328)
T 4fcg_A 80 QPGRVALELRSVPLPQFPD--QAFRLSH-LQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRE 154 (328)
T ss_dssp STTCCEEEEESSCCSSCCS--CGGGGTT-CSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCE
T ss_pred ccceeEEEccCCCchhcCh--hhhhCCC-CCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCE
Confidence 4789999999999997655 4677876 999999999999 78899999999999999999999 77889999999999
Q ss_pred EecccCccccccCccccC---------CCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCCcccCCCCccce
Q 041689 173 VGLKDNKLEGTIPYDIFR---------LVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEIGNLKVLIG 242 (652)
Q Consensus 173 L~L~~N~l~~~~~~~~~~---------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~~~~~l~~L~~ 242 (652)
|+|++|.+.+.+|..+.. +++|++|+|++|+++ .+|..|..+++|++|+|++|. ..+|..++.+++|+.
T Consensus 155 L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~ 233 (328)
T 4fcg_A 155 LSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEE 233 (328)
T ss_dssp EEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCE
T ss_pred EECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCE
Confidence 999999888899987765 999999999999999 677889999999999999997 667888999999999
Q ss_pred EecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcC
Q 041689 243 IDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKL 322 (652)
Q Consensus 243 L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 322 (652)
|++++|++.+.+|..|.++++|++|+|++|.+.+.+|..+..+++|+.|+|++|++.+.+|..+.++++|+.+++..|.+
T Consensus 234 L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 234 LDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp EECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred EECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred cc
Q 041689 323 EG 324 (652)
Q Consensus 323 ~~ 324 (652)
..
T Consensus 314 ~~ 315 (328)
T 4fcg_A 314 AQ 315 (328)
T ss_dssp CC
T ss_pred HH
Confidence 63
No 311
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.97 E-value=3.8e-29 Score=277.45 Aligned_cols=261 Identities=23% Similarity=0.238 Sum_probs=218.9
Q ss_pred eeceeEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCc
Q 041689 5 SIGKLELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPEL 84 (652)
Q Consensus 5 ~l~~l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~ 84 (652)
.++.|+++.|.+. ++|..+ +++|++|+|++|+|+. +|. .+++|++|+|++|+|++++.
T Consensus 41 ~l~~L~ls~n~L~---~lp~~l-~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~-------------- 98 (622)
T 3g06_A 41 GNAVLNVGESGLT---TLPDCL-PAHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTSLPV-------------- 98 (622)
T ss_dssp CCCEEECCSSCCS---CCCSCC-CTTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSCCCC--------------
T ss_pred CCcEEEecCCCcC---ccChhh-CCCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCcCCC--------------
Confidence 5788999999988 789887 5899999999999995 554 57999999999999975332
Q ss_pred ccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccc
Q 041689 85 SFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTL 164 (652)
Q Consensus 85 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 164 (652)
.+++|++|+|++|+|++++. . +.+|+.|++++|+|++ +|.. +++|++|+|++|+|+++ |.
T Consensus 99 -------~l~~L~~L~Ls~N~l~~l~~-----~-l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~~-- 158 (622)
T 3g06_A 99 -------LPPGLLELSIFSNPLTHLPA-----L-PSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL-PA-- 158 (622)
T ss_dssp -------CCTTCCEEEECSCCCCCCCC-----C-CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC--
T ss_pred -------CCCCCCEEECcCCcCCCCCC-----C-CCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc-CC--
Confidence 46889999999999998755 2 3359999999999996 4443 58999999999999954 43
Q ss_pred cCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCCcccCCCCccceE
Q 041689 165 RELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEIGNLKVLIGI 243 (652)
Q Consensus 165 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~~~~~l~~L~~L 243 (652)
.+++|+.|++++|+|++ +| ..+++|+.|+|++|+|+++++ .+++|+.|++++|. ..+|. .+++|+.|
T Consensus 159 -~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~l~~l~~---~~~~L~~L 226 (622)
T 3g06_A 159 -LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASLPT----LPSELYKLWAYNNRLTSLPA---LPSGLKEL 226 (622)
T ss_dssp -CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSSCCC---CCTTCCEE
T ss_pred -ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCCCC----ccchhhEEECcCCcccccCC---CCCCCCEE
Confidence 35789999999999994 66 456899999999999996443 35899999999997 44554 34789999
Q ss_pred ecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCc
Q 041689 244 DFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLE 323 (652)
Q Consensus 244 ~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 323 (652)
++++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++
T Consensus 227 ~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~ 297 (622)
T 3g06_A 227 IVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLS 297 (622)
T ss_dssp ECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCC
T ss_pred EccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCC
Confidence 999999997 44 56689999999999999 5565 6789999999999999 77888999999999999999999
Q ss_pred ccCCC
Q 041689 324 GEIPK 328 (652)
Q Consensus 324 ~~~p~ 328 (652)
+.+|.
T Consensus 298 ~~~~~ 302 (622)
T 3g06_A 298 ERTLQ 302 (622)
T ss_dssp HHHHH
T ss_pred CcCHH
Confidence 87664
No 312
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2.3e-29 Score=259.52 Aligned_cols=233 Identities=20% Similarity=0.228 Sum_probs=136.9
Q ss_pred CCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCc
Q 041689 28 PHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLN 107 (652)
Q Consensus 28 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 107 (652)
..++++|+|++|+++ .+|..+..+++|++|+|++|.|+.++. .+.++++|++|+|++|+++
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~~lp~------------------~~~~l~~L~~L~Ls~n~l~ 140 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLMELPD------------------TMQQFAGLETLTLARNPLR 140 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCCCCCS------------------CGGGGTTCSEEEEESCCCC
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCccchhH------------------HHhccCCCCEEECCCCccc
Confidence 356777777777776 456666667777777777777662221 3556666666666666666
Q ss_pred ccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCcc
Q 041689 108 GILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYD 187 (652)
Q Consensus 108 ~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 187 (652)
.+ |. .+..+++ |++|+|++|++.+.+|..+... ..+..|.++++|++|+|++|+|+ .+|..
T Consensus 141 ~l-p~-~l~~l~~-L~~L~L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~ 201 (328)
T 4fcg_A 141 AL-PA-SIASLNR-LRELSIRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPAS 201 (328)
T ss_dssp CC-CG-GGGGCTT-CCEEEEEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGG
T ss_pred cC-cH-HHhcCcC-CCEEECCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHh
Confidence 43 33 4555554 6666666666555555554330 00011223444555555555554 44444
Q ss_pred ccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC--CCCCcccCCCCccceEecccccCCccCcccccCCCCCc
Q 041689 188 IFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND--GPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQ 265 (652)
Q Consensus 188 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~--~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~ 265 (652)
+..+++|++|+|++|+++++ |..|..+++|++|+|++|. ..+|..++.+++|+.|++++|++.+.+|..+..+++|+
T Consensus 202 l~~l~~L~~L~L~~N~l~~l-~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~ 280 (328)
T 4fcg_A 202 IANLQNLKSLKIRNSPLSAL-GPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLE 280 (328)
T ss_dssp GGGCTTCCEEEEESSCCCCC-CGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCC
T ss_pred hcCCCCCCEEEccCCCCCcC-chhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCC
Confidence 44455555555555555432 2234445555555555542 34455555556666666666666667777777777777
Q ss_pred EEEccCCcCCCcccccccccccCcceeccccccC
Q 041689 266 YLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLS 299 (652)
Q Consensus 266 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 299 (652)
+|+|++|.+.+.+|..+..+++|+.+++..|.+.
T Consensus 281 ~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 281 KLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp EEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred EEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 7777777777777777777777777777776665
No 313
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.96 E-value=1.4e-32 Score=298.08 Aligned_cols=341 Identities=17% Similarity=0.131 Sum_probs=215.5
Q ss_pred ceeeeceeEeccCCCcCCccCCCCC-CCCCCCEEECCCCcCccc----CCccccCCCCCCEEEcCCCcCeeccC------
Q 041689 2 FSISIGKLELNVDDIESPCEIPSEI-NPHNLEELLLGQNNLVGV----VPAAIFDVSTLKDLALQDNYLSGSLS------ 70 (652)
Q Consensus 2 ~~~~l~~l~l~~~~~~~~~~ip~~~-~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~------ 70 (652)
+|++++.|+|+.|.+... .+...+ .+++|++|+|++|+++.. ++..|..+++|++|+|++|.++....
T Consensus 1 l~~~l~~L~Ls~~~l~~~-~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 79 (461)
T 1z7x_W 1 MSLDIQSLDIQCEELSDA-RWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQG 79 (461)
T ss_dssp -CEEEEEEEEESCCCCHH-HHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHT
T ss_pred CCccceehhhhhcccCch-hHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHH
Confidence 588999999999988742 122223 578999999999998843 46678888999999999998864211
Q ss_pred ------CCccccccCCCCCc----ccccccCCCCCCcEEEcccCCCcccCCccchhc-----ccccCcEEEccCCccccc
Q 041689 71 ------SIADNYLTSSTPEL----SFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGN-----LSHSLEIFDMSKCNVSGG 135 (652)
Q Consensus 71 ------~~~~~~l~~~~~~~----~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~-----l~~~L~~L~L~~N~l~~~ 135 (652)
.+....+..+.... .....+.++++|++|+|++|.+++..+. .+.. .+ +|++|+|++|++++.
T Consensus 80 l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~-~l~~~l~~~~~-~L~~L~L~~n~l~~~ 157 (461)
T 1z7x_W 80 LQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQ-LLCEGLLDPQC-RLEKLQLEYCSLSAA 157 (461)
T ss_dssp TCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHH-HHHHHHTSTTC-CCCEEECTTSCCBGG
T ss_pred HhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHH-HHHHHHhcCCC-cceEEECCCCCCCHH
Confidence 23333333333221 1234566777777777777777654332 1111 12 377777777777753
Q ss_pred ----CCccccCCCCCCEEEecCccccccCCcccc-----CCCCCcEEecccCccccc----cCccccCCCCCcEEEccCC
Q 041689 136 ----IPEEIGNLTNLTAIYLGGNKLNGSIPFTLR-----ELQKLQYVGLKDNKLEGT----IPYDIFRLVKLYKLDLGGN 202 (652)
Q Consensus 136 ----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N 202 (652)
++..+..+++|++|+|++|.++...+..+. ..++|++|+|++|.+++. ++..+..+++|++|++++|
T Consensus 158 ~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n 237 (461)
T 1z7x_W 158 SCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSN 237 (461)
T ss_dssp GHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSS
T ss_pred HHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCC
Confidence 255566677777777777777644333332 255777777777777753 4556666777777777777
Q ss_pred cccccc-----cccCCCCCCCCEEEccCCCCC------CCcccCCCCccceEecccccCCccCcccccC-----CCCCcE
Q 041689 203 KLSGSI-----LTCFSNLASLRTLSLSYNDGP------LPLEIGNLKVLIGIDFSMNNFSSVIPTTIGS-----LKDLQY 266 (652)
Q Consensus 203 ~l~~~~-----~~~~~~l~~L~~L~Ls~N~~~------~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-----l~~L~~ 266 (652)
++++.. +..+..+++|++|++++|... ++..+..+++|+.|++++|.++...+..+.. .++|++
T Consensus 238 ~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~ 317 (461)
T 1z7x_W 238 KLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLES 317 (461)
T ss_dssp BCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCE
T ss_pred cCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCcccee
Confidence 776432 333445677777777777521 3555666777777777777776443333322 257777
Q ss_pred EEccCCcCCCc----ccccccccccCcceeccccccCCCCchhhcC-----CCCCceEEeecCcCcc----cCCC-CCCC
Q 041689 267 LFLGYNILKGS----IPDSVGDLISLKSLNFSNNNLSGAIPLLLEK-----LSYLEHLNLSFNKLEG----EIPK-GGSF 332 (652)
Q Consensus 267 L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~----~~p~-~~~~ 332 (652)
|+|++|.+++. ++..+..+++|+.|+|++|++++..+..+.. .++|+.|++++|.+++ .+|. ...+
T Consensus 318 L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~ 397 (461)
T 1z7x_W 318 LWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLAN 397 (461)
T ss_dssp EECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHC
T ss_pred eEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhC
Confidence 77777777654 3455566677777777777776554444432 5677777777777764 3332 2345
Q ss_pred CCcccccccCCcc
Q 041689 333 GNFSAESFEGNKL 345 (652)
Q Consensus 333 ~~l~~~~~~~N~~ 345 (652)
++++.+++++|++
T Consensus 398 ~~L~~L~l~~N~i 410 (461)
T 1z7x_W 398 HSLRELDLSNNCL 410 (461)
T ss_dssp CCCCEEECCSSSC
T ss_pred CCccEEECCCCCC
Confidence 6677777777754
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.1e-30 Score=267.75 Aligned_cols=253 Identities=18% Similarity=0.185 Sum_probs=197.5
Q ss_pred CCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeec-cCCCccccccCCCCCcccccccCCCCCCcEEEcccCC
Q 041689 27 NPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGS-LSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNP 105 (652)
Q Consensus 27 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~ 105 (652)
+..+|++|++++|++ .+|..+... |+.|+|++|+++.. .+.... ...-.+.++++|++|+|++|+
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~----------~~~~~~~~l~~L~~L~L~~n~ 106 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRIL----------FGALRVLGISGLQELTLENLE 106 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHH----------HHHHHHHTTSCCCEEEEEEEB
T ss_pred cCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHH----------HHHHHhcCcCCccEEEccCCc
Confidence 356789999999999 567666554 88999999998532 110000 000012267899999999999
Q ss_pred CcccCCccch-hcccccCcEEEccCCcccccCCccccCC-----CCCCEEEecCccccccCCccccCCCCCcEEecccCc
Q 041689 106 LNGILPRMSI-GNLSHSLEIFDMSKCNVSGGIPEEIGNL-----TNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNK 179 (652)
Q Consensus 106 l~~~~~~~~~-~~l~~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 179 (652)
+++..|...+ ..+++ |++|+|++|++++. |..+..+ ++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 107 l~~~~~~~~~~~~l~~-L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 184 (312)
T 1wwl_A 107 VTGTAPPPLLEATGPD-LNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNP 184 (312)
T ss_dssp CBSCCCCCSSSCCSCC-CSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCT
T ss_pred ccchhHHHHHHhcCCC-ccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCC
Confidence 9877666332 67775 99999999999977 7888877 899999999999998888899999999999999999
Q ss_pred cccc--cCccc--cCCCCCcEEEccCCcccc---cccccCCCCCCCCEEEccCCC--CCCC-cccCCCCccceEeccccc
Q 041689 180 LEGT--IPYDI--FRLVKLYKLDLGGNKLSG---SILTCFSNLASLRTLSLSYND--GPLP-LEIGNLKVLIGIDFSMNN 249 (652)
Q Consensus 180 l~~~--~~~~~--~~l~~L~~L~L~~N~l~~---~~~~~~~~l~~L~~L~Ls~N~--~~~~-~~~~~l~~L~~L~ls~N~ 249 (652)
+.+. .+..+ ..+++|++|+|++|+|++ .....+..+++|++|+|++|. ...| ..+..+++|+.|+|++|+
T Consensus 185 l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~ 264 (312)
T 1wwl_A 185 ELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTG 264 (312)
T ss_dssp TCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSC
T ss_pred cCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCc
Confidence 8765 23344 788999999999999983 333556788999999999996 2233 456778999999999999
Q ss_pred CCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCC
Q 041689 250 FSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSG 300 (652)
Q Consensus 250 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 300 (652)
|+. +|..+. ++|++|+|++|+|++. |. +..+++|+.|+|++|++++
T Consensus 265 l~~-ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 265 LKQ-VPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CSS-CCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cCh-hhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 994 566665 8999999999999966 66 9999999999999999985
No 315
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=9.7e-30 Score=276.50 Aligned_cols=245 Identities=22% Similarity=0.229 Sum_probs=187.0
Q ss_pred CCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCc
Q 041689 28 PHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLN 107 (652)
Q Consensus 28 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 107 (652)
+++|++|+|++|+|+++.|..|..+++|++|+|++|.|++.++ |..+++|++|+|++|.|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-------------------l~~l~~L~~L~Ls~N~l~ 93 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-------------------LESLSTLRTLDLNNNYVQ 93 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-------------------CTTCTTCCEEECCSSEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-------------------cccCCCCCEEEecCCcCC
Confidence 4489999999999999888999999999999999999986543 678899999999999998
Q ss_pred ccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCcc
Q 041689 108 GILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYD 187 (652)
Q Consensus 108 ~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 187 (652)
++++. + +|++|++++|+|++..+. .+++|+.|+|++|.|++..|..|..+++|++|+|++|.|++.+|..
T Consensus 94 ~l~~~------~-~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 163 (487)
T 3oja_A 94 ELLVG------P-SIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAE 163 (487)
T ss_dssp EEEEC------T-TCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGG
T ss_pred CCCCC------C-CcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHH
Confidence 76542 3 499999999999977664 3578899999999998888888888889999999999988878877
Q ss_pred cc-CCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCccCcccccCCCCCcE
Q 041689 188 IF-RLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQY 266 (652)
Q Consensus 188 ~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~ 266 (652)
+. .+++|+.|+|++|.|++..+ +..+++ |+.|+|++|.+++++| .|..+++|+.
T Consensus 164 l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~----------------------L~~L~Ls~N~l~~~~~-~~~~l~~L~~ 218 (487)
T 3oja_A 164 LAASSDTLEHLNLQYNFIYDVKG--QVVFAK----------------------LKTLDLSSNKLAFMGP-EFQSAAGVTW 218 (487)
T ss_dssp GGGGTTTCCEEECTTSCCCEEEC--CCCCTT----------------------CCEEECCSSCCCEECG-GGGGGTTCSE
T ss_pred HhhhCCcccEEecCCCccccccc--cccCCC----------------------CCEEECCCCCCCCCCH-hHcCCCCccE
Confidence 76 68888888888888886532 223444 4555555566665433 3666777777
Q ss_pred EEccCCcCCCcccccccccccCcceeccccccC-CCCchhhcCCCCCceEEee-------cCcCcccCC
Q 041689 267 LFLGYNILKGSIPDSVGDLISLKSLNFSNNNLS-GAIPLLLEKLSYLEHLNLS-------FNKLEGEIP 327 (652)
Q Consensus 267 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~-------~N~l~~~~p 327 (652)
|+|++|.|+ .+|..+..+++|+.|++++|.+. +.+|..+..++.|+.++++ .|+..|..+
T Consensus 219 L~Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~c~~~ 286 (487)
T 3oja_A 219 ISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVP 286 (487)
T ss_dssp EECTTSCCC-EECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHHHHHHHTSSSSCCCSST
T ss_pred EEecCCcCc-ccchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEeccccccccCCCcccccCC
Confidence 777777777 35666777777777777777776 5566667777777777775 555555443
No 316
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=3e-30 Score=280.50 Aligned_cols=241 Identities=18% Similarity=0.140 Sum_probs=155.9
Q ss_pred CCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEE
Q 041689 94 KSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYV 173 (652)
Q Consensus 94 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 173 (652)
++|++|+|++|.++++++. .+..+++ |++|+|++|.|++..| |..+++|++|+|++|.|++..+ .++|++|
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~-~~~~l~~-L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAA-DLAPFTK-LELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp GGCCEEECCSSCCCCCCGG-GGTTCTT-CCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred CCccEEEeeCCcCCCCCHH-HHhCCCC-CCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 3555555555555554443 4445544 5555555555554433 5555555555555555553322 1555555
Q ss_pred ecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC--CCCCcccC-CCCccceEecccccC
Q 041689 174 GLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND--GPLPLEIG-NLKVLIGIDFSMNNF 250 (652)
Q Consensus 174 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~--~~~~~~~~-~l~~L~~L~ls~N~l 250 (652)
+|++|.|++..+. .+++|+.|+|++|.+++..|..|..+++|++|+|++|. ...|..+. .+++|+.|+|++|.+
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 5555555544332 23455566666666655555555555666666666654 22344443 567777777778888
Q ss_pred CccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcc-cCC-C
Q 041689 251 SSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEG-EIP-K 328 (652)
Q Consensus 251 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p-~ 328 (652)
++.. .+..+++|+.|+|++|.|++..| .+..+++|+.|+|++|.|++ +|..+..+++|+.|++++|++.| .+| .
T Consensus 182 ~~~~--~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~ 257 (487)
T 3oja_A 182 YDVK--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (487)
T ss_dssp CEEE--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHH
T ss_pred cccc--ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHH
Confidence 8753 23468999999999999996544 59999999999999999994 67789999999999999999983 222 2
Q ss_pred CCCCCCccccccc-------CCccCCCCC
Q 041689 329 GGSFGNFSAESFE-------GNKLLCGSP 350 (652)
Q Consensus 329 ~~~~~~l~~~~~~-------~N~~~c~~~ 350 (652)
...++.+..+.+. +|++.|..+
T Consensus 258 ~~~l~~L~~l~~~~~~~~~~~~~~~c~~~ 286 (487)
T 3oja_A 258 FSKNQRVQTVAKQTVKKLTGQNEEECTVP 286 (487)
T ss_dssp HTTCHHHHHHHHHHHHHHTSSSSCCCSST
T ss_pred HHhCCCCcEEeccccccccCCCcccccCC
Confidence 3555666666665 788888765
No 317
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.96 E-value=1.6e-28 Score=247.19 Aligned_cols=227 Identities=20% Similarity=0.175 Sum_probs=197.1
Q ss_pred cEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecc
Q 041689 97 VVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLK 176 (652)
Q Consensus 97 ~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 176 (652)
..++.++..++.++.. ++.+|++|++++|+|+++.+..|.++++|++|+|++|+++++.+..|.++++|++|+|+
T Consensus 10 ~~~~c~~~~l~~ip~~-----l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 84 (276)
T 2z62_A 10 ITYQCMELNFYKIPDN-----LPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 84 (276)
T ss_dssp TEEECTTSCCSSCCSS-----SCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred ceEEecCCCccccCCC-----CCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECC
Confidence 3466677777766543 34469999999999998888899999999999999999998888889999999999999
Q ss_pred cCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCC---CCCcccCCCCccceEecccccCCcc
Q 041689 177 DNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDG---PLPLEIGNLKVLIGIDFSMNNFSSV 253 (652)
Q Consensus 177 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~---~~~~~~~~l~~L~~L~ls~N~l~~~ 253 (652)
+|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++|.. .+|..++++++|+.|++++|++++.
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~ 164 (276)
T 2z62_A 85 GNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (276)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred CCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcC
Confidence 9999988888899999999999999999988888899999999999999962 3688899999999999999999998
Q ss_pred CcccccCCCCCc----EEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCCC
Q 041689 254 IPTTIGSLKDLQ----YLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKG 329 (652)
Q Consensus 254 ~~~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 329 (652)
.+..|..+.+|+ .|++++|++++..+..+.. .+|+.|+|++|++++..+..|..+++|+.|++++|+++|.+|..
T Consensus 165 ~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 165 YCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred CHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 888888777777 8999999999666655544 58999999999999887788899999999999999999988754
No 318
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=4.6e-30 Score=263.17 Aligned_cols=248 Identities=21% Similarity=0.197 Sum_probs=208.2
Q ss_pred ccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCccc-ccCCcccc-------CCCCCCEEEecCccccccC
Q 041689 89 SLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVS-GGIPEEIG-------NLTNLTAIYLGGNKLNGSI 160 (652)
Q Consensus 89 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~-~~~~~~~~-------~l~~L~~L~L~~N~l~~~~ 160 (652)
.+...++|+.|++++|.+ .+ |. .+. ..|+.|+|++|+++ ..+|..+. ++++|++|+|++|++++..
T Consensus 38 ~~~~~~~L~~l~l~~n~l-~~-p~-~~~---~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 111 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE-AD-LG-QFT---DIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTA 111 (312)
T ss_dssp EEEEEEECTTHHHHCCTT-CC-CH-HHH---HHHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCC
T ss_pred EEccCCCceeEeeccccc-cc-HH-HHH---HHHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchh
Confidence 356678899999999999 33 43 233 33999999999995 44666665 7999999999999999888
Q ss_pred Cccc--cCCCCCcEEecccCccccccCccccCC-----CCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCC----
Q 041689 161 PFTL--RELQKLQYVGLKDNKLEGTIPYDIFRL-----VKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGP---- 229 (652)
Q Consensus 161 ~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~---- 229 (652)
|..+ ..+++|++|+|++|+|++. |..+..+ ++|++|+|++|++++..+..|..+++|++|+|++|+..
T Consensus 112 ~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 190 (312)
T 1wwl_A 112 PPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERG 190 (312)
T ss_dssp CCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHH
T ss_pred HHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchH
Confidence 8876 8999999999999999976 8888877 89999999999999999899999999999999999721
Q ss_pred CCccc--CCCCccceEecccccCCcc---CcccccCCCCCcEEEccCCcCCCccc-ccccccccCcceeccccccCCCCc
Q 041689 230 LPLEI--GNLKVLIGIDFSMNNFSSV---IPTTIGSLKDLQYLFLGYNILKGSIP-DSVGDLISLKSLNFSNNNLSGAIP 303 (652)
Q Consensus 230 ~~~~~--~~l~~L~~L~ls~N~l~~~---~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~ 303 (652)
.|..+ +.+++|++|++++|++++. ....+..+++|++|+|++|++++..| ..+..+++|+.|+|++|+|+ .+|
T Consensus 191 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip 269 (312)
T 1wwl_A 191 LISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVP 269 (312)
T ss_dssp HHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCC
T ss_pred HHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhh
Confidence 34444 8999999999999999842 23445688999999999999998775 55677899999999999998 667
Q ss_pred hhhcCCCCCceEEeecCcCcccCCCCCCCCCcccccccCCccCC
Q 041689 304 LLLEKLSYLEHLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLC 347 (652)
Q Consensus 304 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~~~~~~N~~~c 347 (652)
..+. ++|+.|+|++|++++. |....++.++.+++++|++..
T Consensus 270 ~~~~--~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 270 KGLP--AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp SSCC--SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCTTTC
T ss_pred hhcc--CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCCCCC
Confidence 6665 7999999999999987 558888999999999998854
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=3.1e-27 Score=262.03 Aligned_cols=258 Identities=24% Similarity=0.227 Sum_probs=213.5
Q ss_pred CCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCcc
Q 041689 29 HNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNG 108 (652)
Q Consensus 29 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 108 (652)
.++++|++++|+|+ .+|..+. ++|+.|+|++|+|+.+++ .+++|++|+|++|+|++
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~---------------------~l~~L~~L~Ls~N~l~~ 95 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA---------------------LPPELRTLEVSGNQLTS 95 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC---------------------CCTTCCEEEECSCCCSC
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC---------------------cCCCCCEEEcCCCcCCc
Confidence 46999999999999 5676665 899999999999984432 36889999999999998
Q ss_pred cCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccc
Q 041689 109 ILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDI 188 (652)
Q Consensus 109 ~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 188 (652)
++. .++ +|++|+|++|+|+++.+ .+++|+.|+|++|+|++ +|.. +++|++|+|++|+|++ +|.
T Consensus 96 lp~-----~l~-~L~~L~Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~-- 158 (622)
T 3g06_A 96 LPV-----LPP-GLLELSIFSNPLTHLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA-- 158 (622)
T ss_dssp CCC-----CCT-TCCEEEECSCCCCCCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC--
T ss_pred CCC-----CCC-CCCEEECcCCcCCCCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC--
Confidence 755 344 49999999999996544 67899999999999996 4443 4899999999999994 454
Q ss_pred cCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCCcccCCCCccceEecccccCCccCcccccCCCCCcEE
Q 041689 189 FRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYL 267 (652)
Q Consensus 189 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L 267 (652)
...+|+.|++++|+|++++ ..+++|+.|++++|. ..+|.. +++|+.|++++|.++.+ |. .+++|+.|
T Consensus 159 -~~~~L~~L~L~~N~l~~l~----~~~~~L~~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~~l-~~---~~~~L~~L 226 (622)
T 3g06_A 159 -LPSELCKLWAYNNQLTSLP----MLPSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLTSL-PA---LPSGLKEL 226 (622)
T ss_dssp -CCTTCCEEECCSSCCSCCC----CCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSSC-CC---CCTTCCEE
T ss_pred -ccCCCCEEECCCCCCCCCc----ccCCCCcEEECCCCCCCCCCCc---cchhhEEECcCCccccc-CC---CCCCCCEE
Confidence 3468999999999999754 557899999999997 445543 47899999999999964 43 35889999
Q ss_pred EccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCCCCCCCCcccccccCCccCC
Q 041689 268 FLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLC 347 (652)
Q Consensus 268 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~~~~~~N~~~c 347 (652)
+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|.|+..++....+++++.+++.+|++..
T Consensus 227 ~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~l~~ 298 (622)
T 3g06_A 227 IVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSE 298 (622)
T ss_dssp ECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSCCCCH
T ss_pred EccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCCCCCC
Confidence 999999995 55 45689999999999999 4554 6789999999999999665556788899999999999864
No 320
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=1.7e-27 Score=239.69 Aligned_cols=225 Identities=22% Similarity=0.257 Sum_probs=125.0
Q ss_pred CCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCC
Q 041689 14 DDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNC 93 (652)
Q Consensus 14 ~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l 93 (652)
|....+.++|..+ +++|++|+|++|+|+++.+..|.++++|++|+|++|+|+++.+. .|.++
T Consensus 14 c~~~~l~~ip~~l-~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-----------------~~~~l 75 (276)
T 2z62_A 14 CMELNFYKIPDNL-PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDG-----------------AYQSL 75 (276)
T ss_dssp CTTSCCSSCCSSS-CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTT-----------------TTTTC
T ss_pred ecCCCccccCCCC-CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHH-----------------HccCC
Confidence 3333445677776 56778888888887777666777777777777777777655442 35566
Q ss_pred CCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEE
Q 041689 94 KSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYV 173 (652)
Q Consensus 94 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 173 (652)
++|++|+|++|+++++.+. .+..+++ |++|++++|++++..+..+..+++|++|+|++|++++..
T Consensus 76 ~~L~~L~L~~n~l~~~~~~-~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------------- 140 (276)
T 2z62_A 76 SHLSTLILTGNPIQSLALG-AFSGLSS-LQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK------------- 140 (276)
T ss_dssp TTCCEEECTTCCCCEECTT-TTTTCTT-CCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCC-------------
T ss_pred cCCCEEECCCCccCccChh-hhcCCcc-ccEEECCCCCccccCchhcccCCCCCEEECcCCccceec-------------
Confidence 6666666666666655444 4444443 555555555555444444555555555555555544321
Q ss_pred ecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCcc
Q 041689 174 GLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSV 253 (652)
Q Consensus 174 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~ 253 (652)
+|..+..+++|++|+|++|+++++.+..|..+++|+.|.+ .|++++|.++++
T Consensus 141 ----------l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l------------------~L~ls~n~l~~~ 192 (276)
T 2z62_A 141 ----------LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL------------------SLDLSLNPMNFI 192 (276)
T ss_dssp ----------CCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCE------------------EEECCSSCCCEE
T ss_pred ----------CchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccce------------------eeecCCCccccc
Confidence 3445555555555555555555444444443333331110 344444445443
Q ss_pred CcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCC
Q 041689 254 IPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSG 300 (652)
Q Consensus 254 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 300 (652)
.+..+.. .+|+.|+|++|++++..+..|..+++|+.|+|++|++++
T Consensus 193 ~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 193 QPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred CccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 3333332 256666666666665555555666666666666666653
No 321
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.95 E-value=1.1e-30 Score=283.08 Aligned_cols=233 Identities=16% Similarity=0.092 Sum_probs=187.0
Q ss_pred CCCCCcEEEcccCCCcccCCc---cchhcccccCcEEEccCCcccccCCcccc-----CCCCCCEEEecCcccccc----
Q 041689 92 NCKSLVVFLLSNNPLNGILPR---MSIGNLSHSLEIFDMSKCNVSGGIPEEIG-----NLTNLTAIYLGGNKLNGS---- 159 (652)
Q Consensus 92 ~l~~L~~L~Ls~N~l~~~~~~---~~~~~l~~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~---- 159 (652)
..++|++|+|++|++++.... ..+..+++ |++|++++|.++...+..+. .+++|++|+|++|.++..
T Consensus 140 ~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~-L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 218 (461)
T 1z7x_W 140 PQCRLEKLQLEYCSLSAASCEPLASVLRAKPD-FKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRD 218 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHHHHCTT-CCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHH
T ss_pred CCCcceEEECCCCCCCHHHHHHHHHHHhhCCC-CCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHH
Confidence 467899999999999875321 13455565 99999999999876555554 367999999999999864
Q ss_pred CCccccCCCCCcEEecccCcccccc-----CccccCCCCCcEEEccCCccccc----ccccCCCCCCCCEEEccCCCCC-
Q 041689 160 IPFTLRELQKLQYVGLKDNKLEGTI-----PYDIFRLVKLYKLDLGGNKLSGS----ILTCFSNLASLRTLSLSYNDGP- 229 (652)
Q Consensus 160 ~~~~~~~l~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~~~- 229 (652)
++..+..+++|++|+|++|++++.. +..+..+++|++|++++|.++.. ++..+..+++|++|++++|...
T Consensus 219 l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 298 (461)
T 1z7x_W 219 LCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGD 298 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHH
T ss_pred HHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCch
Confidence 4777889999999999999998643 22333588999999999999864 5677888999999999999621
Q ss_pred -----CCccc-CCCCccceEecccccCCcc----CcccccCCCCCcEEEccCCcCCCcccccccc-----cccCcceecc
Q 041689 230 -----LPLEI-GNLKVLIGIDFSMNNFSSV----IPTTIGSLKDLQYLFLGYNILKGSIPDSVGD-----LISLKSLNFS 294 (652)
Q Consensus 230 -----~~~~~-~~l~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~ 294 (652)
+...+ ...++|+.|++++|.+++. ++..+..+++|++|+|++|++++..+..+.. .++|+.|+|+
T Consensus 299 ~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 378 (461)
T 1z7x_W 299 EGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLA 378 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECC
Confidence 11112 2336999999999999875 4666778899999999999998765555543 6799999999
Q ss_pred ccccCC----CCchhhcCCCCCceEEeecCcCccc
Q 041689 295 NNNLSG----AIPLLLEKLSYLEHLNLSFNKLEGE 325 (652)
Q Consensus 295 ~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~ 325 (652)
+|++++ .+|..+..+++|++|++++|++++.
T Consensus 379 ~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 379 DCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp TSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred CCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 999986 7788899999999999999999854
No 322
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=7.2e-27 Score=234.19 Aligned_cols=206 Identities=26% Similarity=0.259 Sum_probs=155.8
Q ss_pred CCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEe
Q 041689 95 SLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVG 174 (652)
Q Consensus 95 ~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 174 (652)
+.+.+++++|.++.++.. ++.+|++|+|++|+|+++.+..|.++++|++|+|++|+|+.+.+..|.++++|++|+
T Consensus 17 ~~~~l~~~~~~l~~ip~~-----~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~ 91 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSN-----IPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLW 91 (270)
T ss_dssp TTTEEECTTSCCSSCCSC-----CCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEE
T ss_pred CCCEEEccCCCCCccCCC-----CCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEE
Confidence 577888888888876543 234588888888888877777888888888888888888876667777888888888
Q ss_pred cccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCccC
Q 041689 175 LKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVI 254 (652)
Q Consensus 175 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~~ 254 (652)
|++|+|++..+..|..+++|++|+|++|+++++.+..|..+++|++|+ +++|+++++.
T Consensus 92 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~----------------------Ls~n~l~~~~ 149 (270)
T 2o6q_A 92 VTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS----------------------LGYNELQSLP 149 (270)
T ss_dssp CCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE----------------------CCSSCCCCCC
T ss_pred CCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE----------------------CCCCcCCccC
Confidence 888888866666677777788888888877766665555555555554 5556666666
Q ss_pred cccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCC
Q 041689 255 PTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIP 327 (652)
Q Consensus 255 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 327 (652)
+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.|..+
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 6667778888888888888887666778888888888888888887766778888888888888888877654
No 323
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=1.4e-26 Score=231.99 Aligned_cols=197 Identities=24% Similarity=0.313 Sum_probs=111.9
Q ss_pred ceeEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCccc
Q 041689 7 GKLELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSF 86 (652)
Q Consensus 7 ~~l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~ 86 (652)
+.++++.+.++ ++|..+ +.++++|+|++|+|+++.+..|.++++|++|+|++|+|+.+++.
T Consensus 19 ~~l~~~~~~l~---~ip~~~-~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~--------------- 79 (270)
T 2o6q_A 19 NSVDCSSKKLT---AIPSNI-PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAG--------------- 79 (270)
T ss_dssp TEEECTTSCCS---SCCSCC-CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTT---------------
T ss_pred CEEEccCCCCC---ccCCCC-CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChh---------------
Confidence 44555555544 455554 45566666666666655555566666666666666666543332
Q ss_pred ccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccC
Q 041689 87 LSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRE 166 (652)
Q Consensus 87 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 166 (652)
.|.++++|++|+|++|+++++++. .+..+++ |++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..
T Consensus 80 --~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 155 (270)
T 2o6q_A 80 --IFKELKNLETLWVTDNKLQALPIG-VFDQLVN-LAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDK 155 (270)
T ss_dssp --TTSSCTTCCEEECCSSCCCCCCTT-TTTTCSS-CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred --hhcCCCCCCEEECCCCcCCcCCHh-HcccccC-CCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccC
Confidence 245556666666666666655444 4445544 666666666666555555566666666666666665555555555
Q ss_pred CCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCC
Q 041689 167 LQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYN 226 (652)
Q Consensus 167 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 226 (652)
+++|++|+|++|+|++..+..|..+++|++|+|++|+++++++..|..+++|+.|+|++|
T Consensus 156 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 215 (270)
T 2o6q_A 156 LTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215 (270)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCC
Confidence 666666666666665444445555556666666666665555555555555555555554
No 324
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.95 E-value=1.3e-26 Score=234.56 Aligned_cols=201 Identities=23% Similarity=0.185 Sum_probs=112.5
Q ss_pred hcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccccCCCCCc
Q 041689 116 GNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLY 195 (652)
Q Consensus 116 ~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 195 (652)
.++++ ++++++++|+++.+ |..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.|++..+. ..+++|+
T Consensus 7 ~~l~~-l~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 7 SKVAS-HLEVNCDKRNLTAL-PPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp ECSTT-CCEEECTTSCCSSC-CSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred cccCC-ccEEECCCCCCCcC-CCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 34444 77777777777643 33332 5667777777777666666677777777777777777643332 5566666
Q ss_pred EEEccCCcccccccccCCCCCCCCEEEccCCC-CCCC-cccCCCCccceEecccccCCccCcccccCCCCCcEEEccCCc
Q 041689 196 KLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLP-LEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNI 273 (652)
Q Consensus 196 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 273 (652)
+|+|++|+|+ .+|..+..+++|++|+|++|+ ..+| ..|.++++|+.|+|++|+++++.+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 6666666666 344455555566666555554 2222 335555555555555555555444445555555555555555
Q ss_pred CCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcc
Q 041689 274 LKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEG 324 (652)
Q Consensus 274 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 324 (652)
|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++.|
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 55444444455555555555555555 334444444455555555555544
No 325
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.95 E-value=1.3e-26 Score=234.41 Aligned_cols=202 Identities=22% Similarity=0.200 Sum_probs=183.6
Q ss_pred cCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCC
Q 041689 90 LSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQK 169 (652)
Q Consensus 90 l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 169 (652)
+.++++|+.+++++|.++.+++. ++.+|+.|+|++|+|++..+..|..+++|++|+|++|+|+++.+. ..+++
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~-----~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~ 78 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPD-----LPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPV 78 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSC-----CCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTT
T ss_pred ccccCCccEEECCCCCCCcCCCC-----CCCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCc
Confidence 66889999999999999988764 234699999999999999999999999999999999999976553 78999
Q ss_pred CcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCCc-ccCCCCccceEeccc
Q 041689 170 LQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPL-EIGNLKVLIGIDFSM 247 (652)
Q Consensus 170 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~-~~~~l~~L~~L~ls~ 247 (652)
|++|+|++|+|+ .+|..+..+++|++|+|++|+|+++.+..|..+++|++|+|++|+ ..+|. .|..+++|+.|+|++
T Consensus 79 L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 157 (290)
T 1p9a_G 79 LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 157 (290)
T ss_dssp CCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCC
Confidence 999999999999 788889999999999999999999999999999999999999997 44444 478999999999999
Q ss_pred ccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCC
Q 041689 248 NNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSG 300 (652)
Q Consensus 248 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 300 (652)
|+|+++.+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|.+..
T Consensus 158 N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 158 NNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 9999988888899999999999999999 778888888999999999999974
No 326
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.94 E-value=8.9e-27 Score=233.74 Aligned_cols=209 Identities=22% Similarity=0.263 Sum_probs=111.6
Q ss_pred CCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCC
Q 041689 27 NPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPL 106 (652)
Q Consensus 27 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 106 (652)
++++|++|++++|.++.. ..+..+++|++|+|++|++++. ..+.++++|++|+|++|.+
T Consensus 39 ~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~-------------------~~l~~l~~L~~L~L~~n~l 97 (272)
T 3rfs_A 39 ELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI-------------------SALKELTNLTYLILTGNQL 97 (272)
T ss_dssp HHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC-------------------GGGTTCTTCCEEECTTSCC
T ss_pred cccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc-------------------hhhcCCCCCCEEECCCCcc
Confidence 345555666665555522 2355555566666655555421 1244555555555555555
Q ss_pred cccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCc
Q 041689 107 NGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPY 186 (652)
Q Consensus 107 ~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 186 (652)
+++++. .+..+++ |++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+.
T Consensus 98 ~~~~~~-~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 175 (272)
T 3rfs_A 98 QSLPNG-VFDKLTN-LKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEG 175 (272)
T ss_dssp CCCCTT-TTTTCTT-CCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CccChh-HhcCCcC-CCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHH
Confidence 555443 3444443 55555555555555555555555555555555555554455555555555555555555544444
Q ss_pred cccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCccCcccccCCCCCcE
Q 041689 187 DIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQY 266 (652)
Q Consensus 187 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~ 266 (652)
.|..+++|++|++++|++++..+..|..+++|++|++ ++|.+.+. +++|+.
T Consensus 176 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l----------------------~~N~~~~~-------~~~l~~ 226 (272)
T 3rfs_A 176 VFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWL----------------------HDNPWDCT-------CPGIRY 226 (272)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC----------------------CSSCBCCC-------TTTTHH
T ss_pred HhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEc----------------------cCCCcccc-------CcHHHH
Confidence 4555555555555555555555444555555555555 45544432 334566
Q ss_pred EEccCCcCCCccccccccccc
Q 041689 267 LFLGYNILKGSIPDSVGDLIS 287 (652)
Q Consensus 267 L~L~~N~l~~~~p~~~~~l~~ 287 (652)
|+++.|.++|.+|..++.++.
T Consensus 227 l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 227 LSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp HHHHHHHTGGGBBCTTSCBCG
T ss_pred HHHHHHhCCCcccCcccccCC
Confidence 666666666666665555443
No 327
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=2.6e-27 Score=259.55 Aligned_cols=186 Identities=18% Similarity=0.150 Sum_probs=144.1
Q ss_pred CccceeccccceEEEEEEeCCCcEEEEEEeecccc--------hhhhhHHHHHHHHHhcCCCeeeeEEeeeecCCceEEE
Q 041689 428 NENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCG--------RAFKSFDIECEIMKSIHYRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 428 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 499 (652)
...+.||+|+||.||+|.. .++.+|+|+...... ...+++.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 578899998643211 1234588999999999999999666555567778999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCC
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGED 579 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 579 (652)
|||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+||++++ .+||+|||+++......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999998875 457999999999999999 9999999999999998 99999999999763211
Q ss_pred Ccc-----ccccccCCccccCcccccc--CccCcccchhhHHHHHHHHHhCCCCcc
Q 041689 580 QSM-----TQTQTLATIGYIAPEYGRE--GRVFANGDVYSFGIMLMEIHSAKQQCV 628 (652)
Q Consensus 580 ~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~p~~ 628 (652)
... ......||+.|||||++.. ..|+...|+|+..+-..+...++.++.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 111 1134579999999999887 668888999999988888887776653
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.94 E-value=3e-26 Score=229.90 Aligned_cols=219 Identities=25% Similarity=0.273 Sum_probs=134.4
Q ss_pred CCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEe
Q 041689 95 SLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVG 174 (652)
Q Consensus 95 ~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 174 (652)
++..+++..+.+.+.. ....++. |+.|++++|.++.. ..+..+++|++|+|++|++++. ..+..+++|++|+
T Consensus 20 ~l~~l~l~~~~~~~~~---~~~~l~~-L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 91 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAV---TQNELNS-IDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLI 91 (272)
T ss_dssp HHHHHHHTCSCTTSEE---CHHHHTT-CCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEE
T ss_pred HHHHHHhcCccccccc---ccccccc-eeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEE
Confidence 3334444444444332 2233333 55555555555522 2355555555555555555532 2455555555555
Q ss_pred cccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCC-cccCCCCccceEecccccCCc
Q 041689 175 LKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLP-LEIGNLKVLIGIDFSMNNFSS 252 (652)
Q Consensus 175 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~-~~~~~l~~L~~L~ls~N~l~~ 252 (652)
|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|++++|. ..++ ..++.+++|+.|++++|++++
T Consensus 92 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 92 LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 55555554444445555556666666666555555555556666666666554 2222 235666667777777777777
Q ss_pred cCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCC
Q 041689 253 VIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPK 328 (652)
Q Consensus 253 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 328 (652)
..+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|.+.+. ++.|+.|++..|.++|.+|.
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBC
T ss_pred cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccC
Confidence 7777777888888888888888877777778888888888888887643 44678888888888887775
No 329
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.93 E-value=1.1e-25 Score=221.27 Aligned_cols=185 Identities=18% Similarity=0.197 Sum_probs=143.7
Q ss_pred CccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCc-CeeccCCCccccccCCCCCcccccccCCCCCCc
Q 041689 19 PCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNY-LSGSLSSIADNYLTSSTPELSFLSSLSNCKSLV 97 (652)
Q Consensus 19 ~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~ 97 (652)
+.++|. + +.+|++|+|++|+|+++.+..|.++++|++|+|++|+ ++++.+. .|.++++|+
T Consensus 23 l~~ip~-~-~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~-----------------~f~~l~~L~ 83 (239)
T 2xwt_C 23 IQRIPS-L-PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESH-----------------SFYNLSKVT 83 (239)
T ss_dssp CSSCCC-C-CTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTT-----------------TEESCTTCC
T ss_pred ccccCC-C-CCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHh-----------------HcCCCcCCc
Confidence 557888 6 6789999999999998888889999999999999996 8766552 477888899
Q ss_pred EEEccc-CCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCC---EEEecCc-cccccCCccccCCCCCc-
Q 041689 98 VFLLSN-NPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLT---AIYLGGN-KLNGSIPFTLRELQKLQ- 171 (652)
Q Consensus 98 ~L~Ls~-N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~- 171 (652)
+|+|++ |+++++++. .|..+++ |++|++++|++++ +|. |..+++|+ +|++++| +++++.+..|.++++|+
T Consensus 84 ~L~l~~~n~l~~i~~~-~f~~l~~-L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~ 159 (239)
T 2xwt_C 84 HIEIRNTRNLTYIDPD-ALKELPL-LKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETL 159 (239)
T ss_dssp EEEEEEETTCCEECTT-SEECCTT-CCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEE
T ss_pred EEECCCCCCeeEcCHH-HhCCCCC-CCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhccee
Confidence 999988 888887766 6777776 8888888888886 454 77888887 8888888 88877777788888888
Q ss_pred EEecccCccccccCccccCCCCCcEEEccCCc-ccccccccCCCC-CCCCEEEccCCC
Q 041689 172 YVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNK-LSGSILTCFSNL-ASLRTLSLSYND 227 (652)
Q Consensus 172 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l-~~L~~L~Ls~N~ 227 (652)
+|++++|+++ .+|...+..++|+.|+|++|+ ++++.+..|..+ ++|++|++++|.
T Consensus 160 ~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~ 216 (239)
T 2xwt_C 160 TLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTS 216 (239)
T ss_dssp EEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCC
T ss_pred EEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCc
Confidence 8888888888 444443344788888888884 877666677666 666666665553
No 330
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=2.4e-25 Score=227.86 Aligned_cols=225 Identities=16% Similarity=0.178 Sum_probs=172.6
Q ss_pred CCCcEEEcccCCCcccCCc--cchhcccccCcEEEccCCcccccCCccc--cCCCCCCEEEecCccccccCC----cccc
Q 041689 94 KSLVVFLLSNNPLNGILPR--MSIGNLSHSLEIFDMSKCNVSGGIPEEI--GNLTNLTAIYLGGNKLNGSIP----FTLR 165 (652)
Q Consensus 94 ~~L~~L~Ls~N~l~~~~~~--~~~~~l~~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~ 165 (652)
..++.|.++++.++...-. ..+..+++ |++|++++|++++..|..+ ..+++|++|+|++|++++..+ ..+.
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~-L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSR-LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSC-CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCc-eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 3578888888887642110 01223444 9999999999998888888 899999999999999986544 4456
Q ss_pred CCCCCcEEecccCccccccCccccCCCCCcEEEccCCccccc---c-cccCCCCCCCCEEEccCCCCC-CCc----ccCC
Q 041689 166 ELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGS---I-LTCFSNLASLRTLSLSYNDGP-LPL----EIGN 236 (652)
Q Consensus 166 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~-~~~~~~l~~L~~L~Ls~N~~~-~~~----~~~~ 236 (652)
.+++|++|+|++|+|++..+..|..+++|++|+|++|++.+. . +..+..+++|++|+|++|... ++. .+++
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~ 222 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAA 222 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhc
Confidence 788999999999999988888888999999999999998652 2 233477888999999988733 233 1467
Q ss_pred CCccceEecccccCCccCcccccCC---CCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCc
Q 041689 237 LKVLIGIDFSMNNFSSVIPTTIGSL---KDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLE 313 (652)
Q Consensus 237 l~~L~~L~ls~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 313 (652)
+++|++|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 7888888888888888777777666 58888888888888 5666664 6888888888888854 33 67788888
Q ss_pred eEEeecCcCcc
Q 041689 314 HLNLSFNKLEG 324 (652)
Q Consensus 314 ~L~L~~N~l~~ 324 (652)
.|+|++|+|+.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 88888888863
No 331
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.92 E-value=6.7e-25 Score=228.48 Aligned_cols=242 Identities=18% Similarity=0.146 Sum_probs=133.8
Q ss_pred CEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCcccCC
Q 041689 32 EELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNGILP 111 (652)
Q Consensus 32 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~ 111 (652)
++++.++|+++ .+|..+ .+++++|+|++|+|+.+++. +|.++++|++|+|++|++.+..+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~-----------------~f~~l~~L~~L~Ls~N~i~~~i~ 71 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKG-----------------AFSGFGDLEKIEISQNDVLEVIE 71 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTT-----------------SSTTCTTCCEEEEECCTTCCEEC
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHH-----------------HHcCCCCCCEEECcCCCCCCccC
Confidence 34555555555 234333 24555666666665544432 35555666666666666544333
Q ss_pred ccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEeccc-CccccccCccccC
Q 041689 112 RMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKD-NKLEGTIPYDIFR 190 (652)
Q Consensus 112 ~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~ 190 (652)
...|.++++.++.+.++.|+|+++.|+.|.++++|++|++++|+|+...+..+....++..|++.+ |++....+..|..
T Consensus 72 ~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~ 151 (350)
T 4ay9_X 72 ADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVG 151 (350)
T ss_dssp TTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTT
T ss_pred hhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhh
Confidence 324555554233455666777766677777777777777777777766666666666677777754 5666555555555
Q ss_pred CC-CCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCccCcccccCCCCCcEEEc
Q 041689 191 LV-KLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFL 269 (652)
Q Consensus 191 l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L 269 (652)
+. .++.|+|++|+|+.+.+..|. .++|++|++++ +|.++.+.+..|.++++|++|+|
T Consensus 152 ~~~~l~~L~L~~N~i~~i~~~~f~-~~~L~~l~l~~---------------------~n~l~~i~~~~f~~l~~L~~LdL 209 (350)
T 4ay9_X 152 LSFESVILWLNKNGIQEIHNSAFN-GTQLDELNLSD---------------------NNNLEELPNDVFHGASGPVILDI 209 (350)
T ss_dssp SBSSCEEEECCSSCCCEECTTSST-TEEEEEEECTT---------------------CTTCCCCCTTTTTTEECCSEEEC
T ss_pred cchhhhhhccccccccCCChhhcc-ccchhHHhhcc---------------------CCcccCCCHHHhccCcccchhhc
Confidence 54 466777777777655544443 23444444443 24444444445555666666666
Q ss_pred cCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeec
Q 041689 270 GYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSF 319 (652)
Q Consensus 270 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 319 (652)
++|+|+...+..|.++++|+.+++ +.++ .+| .+..+++|+.+++++
T Consensus 210 s~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~ 255 (350)
T 4ay9_X 210 SRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLEKLVALMEASLTY 255 (350)
T ss_dssp TTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSC
T ss_pred CCCCcCccChhhhccchHhhhccC--CCcC-cCC-CchhCcChhhCcCCC
Confidence 666665444444444444443332 2333 333 245556666666553
No 332
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=5.6e-25 Score=216.20 Aligned_cols=193 Identities=18% Similarity=0.184 Sum_probs=101.1
Q ss_pred CcEEEccCCcccccCCccccCCCCCCEEEecCcc-ccccCCccccCCCCCcEEeccc-CccccccCccccCCCCCcEEEc
Q 041689 122 LEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNK-LNGSIPFTLRELQKLQYVGLKD-NKLEGTIPYDIFRLVKLYKLDL 199 (652)
Q Consensus 122 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L 199 (652)
|++|++++|+|+++.+..|.++++|++|+|++|+ ++.+.+..|.++++|++|+|++ |+|++..+..|..+++|++|++
T Consensus 33 l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l 112 (239)
T 2xwt_C 33 TQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGI 112 (239)
T ss_dssp CCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEE
T ss_pred ccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeC
Confidence 4444444444444444444444444444444443 4444444444444444444444 4444333344444444555555
Q ss_pred cCCcccccccccCCCCCCCC---EEEccCC-C-CCCCc-ccCCCCccc-eEecccccCCccCcccccCCCCCcEEEccCC
Q 041689 200 GGNKLSGSILTCFSNLASLR---TLSLSYN-D-GPLPL-EIGNLKVLI-GIDFSMNNFSSVIPTTIGSLKDLQYLFLGYN 272 (652)
Q Consensus 200 ~~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~-~~~~~-~~~~l~~L~-~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N 272 (652)
++|+++++ |. |..+++|+ +|++++| . ..+|. .|.++++|+ .|++++|+++.+.+..|.. ++|+.|+|++|
T Consensus 113 ~~n~l~~l-p~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n 189 (239)
T 2xwt_C 113 FNTGLKMF-PD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKN 189 (239)
T ss_dssp EEECCCSC-CC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTC
T ss_pred CCCCCccc-cc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCC
Confidence 54444432 22 44444444 5555554 3 22222 245555555 5666666666444444444 66777777777
Q ss_pred c-CCCccccccccc-ccCcceeccccccCCCCchhhcCCCCCceEEeecC
Q 041689 273 I-LKGSIPDSVGDL-ISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFN 320 (652)
Q Consensus 273 ~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 320 (652)
+ +++..+..|..+ ++|+.|+|++|+|++..+. .+++|+.|+++++
T Consensus 190 ~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 190 KYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp TTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 4 665556666666 7777777777777643333 4556777776654
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.92 E-value=8.1e-27 Score=244.22 Aligned_cols=162 Identities=17% Similarity=0.139 Sum_probs=69.6
Q ss_pred EECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCC-CCcEEEcccCCCcccCCc
Q 041689 34 LLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCK-SLVVFLLSNNPLNGILPR 112 (652)
Q Consensus 34 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~~~ 112 (652)
++|++|++++.+|..+...++|++|+|++|.|++.... .....|.+++ +|++|+|++|++++..+.
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~-------------~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~ 69 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTV-------------ELIQAFANTPASVTSLNLSGNSLGFKNSD 69 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHH-------------HHHHHHHTCCTTCCEEECCSSCGGGSCHH
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHH-------------HHHHHHHhCCCceeEEECcCCCCCHHHHH
Confidence 34455555544444444444455555555554422210 0001233444 455555555555444333
Q ss_pred cchhcc----cccCcEEEccCCcccccCCcccc----CC-CCCCEEEecCccccccCCcccc----C-CCCCcEEecccC
Q 041689 113 MSIGNL----SHSLEIFDMSKCNVSGGIPEEIG----NL-TNLTAIYLGGNKLNGSIPFTLR----E-LQKLQYVGLKDN 178 (652)
Q Consensus 113 ~~~~~l----~~~L~~L~L~~N~l~~~~~~~~~----~l-~~L~~L~L~~N~l~~~~~~~~~----~-l~~L~~L~L~~N 178 (652)
.+..+ ..+|++|+|++|+|++..+..+. .+ ++|++|+|++|+|++..+..+. . .++|++|+|++|
T Consensus 70 -~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N 148 (362)
T 3goz_A 70 -ELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGN 148 (362)
T ss_dssp -HHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTS
T ss_pred -HHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCC
Confidence 23322 11255555555555544433222 22 4555555555555543333322 2 135555555555
Q ss_pred cccccc----CccccCCC-CCcEEEccCCccccccc
Q 041689 179 KLEGTI----PYDIFRLV-KLYKLDLGGNKLSGSIL 209 (652)
Q Consensus 179 ~l~~~~----~~~~~~l~-~L~~L~L~~N~l~~~~~ 209 (652)
+|++.. +..+..++ +|++|+|++|+|++..+
T Consensus 149 ~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~ 184 (362)
T 3goz_A 149 DLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNC 184 (362)
T ss_dssp CGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCH
T ss_pred cCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhH
Confidence 555322 22223333 55555555555544333
No 334
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.92 E-value=1.1e-24 Score=226.92 Aligned_cols=232 Identities=21% Similarity=0.203 Sum_probs=183.4
Q ss_pred cCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCC
Q 041689 17 ESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSL 96 (652)
Q Consensus 17 ~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L 96 (652)
..+++||+.+ ++++++|+|++|+|+.+.+++|.++++|++|+|++|++.+.++. .+|.++++|
T Consensus 19 ~~Lt~iP~~l-~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~----------------~~f~~L~~l 81 (350)
T 4ay9_X 19 SKVTEIPSDL-PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEA----------------DVFSNLPKL 81 (350)
T ss_dssp TTCCSCCTTC-CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECT----------------TSBCSCTTC
T ss_pred CCCCccCcCc-CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccCh----------------hHhhcchhh
Confidence 3345899998 88999999999999988888999999999999999998654442 357888887
Q ss_pred cE-EEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecC-ccccccCCccccCCC-CCcEE
Q 041689 97 VV-FLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGG-NKLNGSIPFTLRELQ-KLQYV 173 (652)
Q Consensus 97 ~~-L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L 173 (652)
+. ++++.|+|+.++++ .|..+++ |++|++++|+|+...+..+....++..|++.+ |++..+.+..|..+. .++.|
T Consensus 82 ~~~l~~~~N~l~~l~~~-~f~~l~~-L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L 159 (350)
T 4ay9_X 82 HEIRIEKANNLLYINPE-AFQNLPN-LQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVIL 159 (350)
T ss_dssp CEEEEEEETTCCEECTT-SBCCCTT-CCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEE
T ss_pred hhhhcccCCcccccCch-hhhhccc-cccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhh
Confidence 64 77788999999887 7888887 99999999999988888888888999999966 688877788888875 68999
Q ss_pred ecccCccccccCccccCCCCCcEEEcc-CCcccccccccCCCCCCCCEEEccCCC-CCCCcc-cCCCCccceEecccccC
Q 041689 174 GLKDNKLEGTIPYDIFRLVKLYKLDLG-GNKLSGSILTCFSNLASLRTLSLSYND-GPLPLE-IGNLKVLIGIDFSMNNF 250 (652)
Q Consensus 174 ~L~~N~l~~~~~~~~~~l~~L~~L~L~-~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~~-~~~l~~L~~L~ls~N~l 250 (652)
+|++|+|+ .+|...+...+|+.|+++ +|.++.+++++|..+++|++|+|++|+ ..+|.. +.+++.|+.+++ +++
T Consensus 160 ~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l 236 (350)
T 4ay9_X 160 WLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNL 236 (350)
T ss_dssp ECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTC
T ss_pred cccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCc
Confidence 99999999 556566667789999997 588887777889999999999888886 445543 444444433332 334
Q ss_pred CccCcccccCCCCCcEEEccCC
Q 041689 251 SSVIPTTIGSLKDLQYLFLGYN 272 (652)
Q Consensus 251 ~~~~~~~~~~l~~L~~L~L~~N 272 (652)
+. +| .+..+++|+.++++++
T Consensus 237 ~~-lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 237 KK-LP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp CC-CC-CTTTCCSCCEEECSCH
T ss_pred Cc-CC-CchhCcChhhCcCCCC
Confidence 43 34 3667777777777654
No 335
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.92 E-value=2.3e-24 Score=213.49 Aligned_cols=177 Identities=23% Similarity=0.260 Sum_probs=94.9
Q ss_pred eceeEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcc
Q 041689 6 IGKLELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELS 85 (652)
Q Consensus 6 l~~l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~ 85 (652)
.+.++++++.++ ++|..+ +++++.|+|++|+|+++.+..|.++++|++|+|++|+|++..+.
T Consensus 16 ~~~l~~~~~~l~---~~p~~~-~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-------------- 77 (251)
T 3m19_A 16 KKEVDCQGKSLD---SVPSGI-PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAG-------------- 77 (251)
T ss_dssp GTEEECTTCCCS---SCCSCC-CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT--------------
T ss_pred CeEEecCCCCcc---ccCCCC-CCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHh--------------
Confidence 344555555554 455555 45666666666666665555666666666666666666544331
Q ss_pred cccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCcccc
Q 041689 86 FLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLR 165 (652)
Q Consensus 86 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 165 (652)
.|.++++|++|+|++|+++++++. .+..+++ |++|+|++|+|+++.+..|..+++|++|+|++|+|+++.+..|.
T Consensus 78 ---~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 152 (251)
T 3m19_A 78 ---VFDDLTELGTLGLANNQLASLPLG-VFDHLTQ-LDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFD 152 (251)
T ss_dssp ---TTTTCTTCCEEECTTSCCCCCCTT-TTTTCTT-CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred ---HhccCCcCCEEECCCCcccccChh-HhcccCC-CCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcC
Confidence 345555566666666655555444 3444443 55555555555544444455555555555555555544444455
Q ss_pred CCCCCcEEecccCccccccCccccCCCCCcEEEccCCccc
Q 041689 166 ELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLS 205 (652)
Q Consensus 166 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 205 (652)
.+++|++|+|++|+|++..+..|..+++|+.|+|++|.++
T Consensus 153 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 153 KLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred cCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 5555555555555555444444444555555555555544
No 336
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.92 E-value=4.1e-24 Score=218.24 Aligned_cols=215 Identities=20% Similarity=0.276 Sum_probs=162.0
Q ss_pred CCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEE
Q 041689 94 KSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYV 173 (652)
Q Consensus 94 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 173 (652)
.++..+.+..+.+++.. ....+++ |++|++++|+++.. + .+..+++|++|+|++|++++..+ +..+++|++|
T Consensus 19 ~~~~~~~l~~~~~~~~~---~~~~l~~-L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L 90 (308)
T 1h6u_A 19 ANAIKIAAGKSNVTDTV---TQADLDG-ITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITEL 90 (308)
T ss_dssp HHHHHHHTTCSSTTSEE---CHHHHHT-CCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEE
T ss_pred HHHHHHHhCCCCcCcee---cHHHcCC-cCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEE
Confidence 33444456666666543 2345555 88888888888753 3 57778888888888888875544 7888888888
Q ss_pred ecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCcc
Q 041689 174 GLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSV 253 (652)
Q Consensus 174 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~ 253 (652)
+|++|++++ ++ .+..+++|++|+|++|++++..+ +..+++|++|++++|.......++.+++|+.|++++|++++.
T Consensus 91 ~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~ 166 (308)
T 1h6u_A 91 ELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDL 166 (308)
T ss_dssp ECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred EccCCcCCC-ch-hhcCCCCCCEEECCCCCCCCchh--hcCCCCCCEEECCCCccCcCccccCCCCccEEEccCCcCCCC
Confidence 888888874 33 57778888888888888876532 788888888888888633333378888888888888988875
Q ss_pred CcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccC
Q 041689 254 IPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEI 326 (652)
Q Consensus 254 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 326 (652)
.+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|++++|++++.+
T Consensus 167 ~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 167 TP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp GG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECCC
T ss_pred hh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecCC
Confidence 44 8888999999999999986544 8888999999999999986553 788999999999999998643
No 337
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.92 E-value=1.1e-26 Score=245.65 Aligned_cols=135 Identities=19% Similarity=0.186 Sum_probs=60.1
Q ss_pred CCCcEEecccCccc-cccC---ccccCCCCCcEEEccCCcccc-----cccccCCCCCCCCEEEccCCCC------CCCc
Q 041689 168 QKLQYVGLKDNKLE-GTIP---YDIFRLVKLYKLDLGGNKLSG-----SILTCFSNLASLRTLSLSYNDG------PLPL 232 (652)
Q Consensus 168 ~~L~~L~L~~N~l~-~~~~---~~~~~l~~L~~L~L~~N~l~~-----~~~~~~~~l~~L~~L~Ls~N~~------~~~~ 232 (652)
++|++|+|++|+|+ +.++ ..+..+++|++|+|++|+|+. ..+..+..+++|++|+|++|.. .+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 44445555555444 1222 233344455555555555441 2222344444444444444421 1223
Q ss_pred ccCCCCccceEecccccCCcc----Cccccc--CCCCCcEEEccCCcCCC----cccccc-cccccCcceeccccccCCC
Q 041689 233 EIGNLKVLIGIDFSMNNFSSV----IPTTIG--SLKDLQYLFLGYNILKG----SIPDSV-GDLISLKSLNFSNNNLSGA 301 (652)
Q Consensus 233 ~~~~l~~L~~L~ls~N~l~~~----~~~~~~--~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~~~ 301 (652)
.+..+++|+.|+|++|.+++. ++..+. .+++|++|+|++|.+++ .+|..+ .++++|+.|+|++|++++.
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 333444444444444444432 233332 25555555555555554 244444 3355555555555555544
Q ss_pred C
Q 041689 302 I 302 (652)
Q Consensus 302 ~ 302 (652)
.
T Consensus 319 ~ 319 (386)
T 2ca6_A 319 D 319 (386)
T ss_dssp S
T ss_pred h
Confidence 4
No 338
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=5.9e-26 Score=237.63 Aligned_cols=251 Identities=16% Similarity=0.146 Sum_probs=175.9
Q ss_pred EEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCcccCC----ccchhcccccCcEEEccCCcc
Q 041689 57 DLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNGILP----RMSIGNLSHSLEIFDMSKCNV 132 (652)
Q Consensus 57 ~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~----~~~~~~l~~~L~~L~L~~N~l 132 (652)
.++|++|.+++.++. .+...++|++|+|++|.+++..+ . .+..++.+|++|+|++|+|
T Consensus 2 ~~~ls~n~~~~~~~~-----------------~~~~~~~L~~L~Ls~n~l~~~~~~~l~~-~l~~~~~~L~~L~Ls~N~l 63 (362)
T 3goz_A 2 NYKLTLHPGSNPVEE-----------------FTSIPHGVTSLDLSLNNLYSISTVELIQ-AFANTPASVTSLNLSGNSL 63 (362)
T ss_dssp EEECCCCTTCCHHHH-----------------HHTSCTTCCEEECTTSCGGGSCHHHHHH-HHHTCCTTCCEEECCSSCG
T ss_pred ccccccccchHHHHH-----------------HHhCCCCceEEEccCCCCChHHHHHHHH-HHHhCCCceeEEECcCCCC
Confidence 467888888766553 23445569999999999887765 3 4566663499999999999
Q ss_pred cccCCccccCC-----CCCCEEEecCccccccCCccc----cCC-CCCcEEecccCccccccCccccC-----CCCCcEE
Q 041689 133 SGGIPEEIGNL-----TNLTAIYLGGNKLNGSIPFTL----REL-QKLQYVGLKDNKLEGTIPYDIFR-----LVKLYKL 197 (652)
Q Consensus 133 ~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~----~~l-~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L 197 (652)
++..+..|..+ ++|++|+|++|++++..+..+ ..+ ++|++|+|++|+|++..+..+.. .++|++|
T Consensus 64 ~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L 143 (362)
T 3goz_A 64 GFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSL 143 (362)
T ss_dssp GGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEE
T ss_pred CHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEE
Confidence 88777777775 889999999999887666644 444 78999999999988665554433 2589999
Q ss_pred EccCCcccccc----cccCCCCC-CCCEEEccCCCC--CCCc----ccCCC-CccceEecccccCCcc----CcccccC-
Q 041689 198 DLGGNKLSGSI----LTCFSNLA-SLRTLSLSYNDG--PLPL----EIGNL-KVLIGIDFSMNNFSSV----IPTTIGS- 260 (652)
Q Consensus 198 ~L~~N~l~~~~----~~~~~~l~-~L~~L~Ls~N~~--~~~~----~~~~l-~~L~~L~ls~N~l~~~----~~~~~~~- 260 (652)
+|++|++++.. +..+..++ +|++|+|++|.. ..+. .+..+ ++|+.|||++|.++.. ++..+..
T Consensus 144 ~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~ 223 (362)
T 3goz_A 144 NLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSI 223 (362)
T ss_dssp ECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHS
T ss_pred EccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcC
Confidence 99999888533 33445555 888888888862 2222 23344 4788888888888763 3344444
Q ss_pred CCCCcEEEccCCcCCCccc----ccccccccCcceeccccccCCCCc-------hhhcCCCCCceEEeecCcCccc
Q 041689 261 LKDLQYLFLGYNILKGSIP----DSVGDLISLKSLNFSNNNLSGAIP-------LLLEKLSYLEHLNLSFNKLEGE 325 (652)
Q Consensus 261 l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~~-------~~~~~l~~L~~L~L~~N~l~~~ 325 (652)
.++|++|+|++|+|++..+ ..+..+++|+.|+|++|.+.+..+ ..+..+++|+.||+++|++.+.
T Consensus 224 ~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 224 PNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp CTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred CCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 3578888888888876443 344666788888888888554433 2456677788888888887654
No 339
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=1.5e-25 Score=232.22 Aligned_cols=250 Identities=17% Similarity=0.169 Sum_probs=127.1
Q ss_pred CCCEEECCCCcCcccCCccccCC--CCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCc
Q 041689 30 NLEELLLGQNNLVGVVPAAIFDV--STLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLN 107 (652)
Q Consensus 30 ~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 107 (652)
.++.|++++|++. +..+..+ ++++.|++++|.+++..+. +.++++|++|+|++|.++
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~------------------~~~~~~L~~L~L~~~~l~ 106 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE------------------HFSPFRVQHMDLSNSVIE 106 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS------------------CCCCBCCCEEECTTCEEC
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh------------------hccCCCCCEEEccCCCcC
Confidence 4556666666554 3444444 5566666666655543331 234555555555555554
Q ss_pred cc-CCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCc-ccccc-CCccccCCCCCcEEecccC-ccccc
Q 041689 108 GI-LPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGN-KLNGS-IPFTLRELQKLQYVGLKDN-KLEGT 183 (652)
Q Consensus 108 ~~-~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~ 183 (652)
+. .+. .+..+++ |++|+|++|++++..+..+..+++|++|+|++| .+++. .+..+.++++|++|++++| .+++.
T Consensus 107 ~~~~~~-~~~~~~~-L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~ 184 (336)
T 2ast_B 107 VSTLHG-ILSQCSK-LQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK 184 (336)
T ss_dssp HHHHHH-HHTTBCC-CSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH
T ss_pred HHHHHH-HHhhCCC-CCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH
Confidence 32 222 3344443 555555555555445555555555555555555 34431 3334445555555555555 55432
Q ss_pred -cCccccCCC-CCcEEEccCC--ccc-ccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEeccccc-CCccCccc
Q 041689 184 -IPYDIFRLV-KLYKLDLGGN--KLS-GSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNN-FSSVIPTT 257 (652)
Q Consensus 184 -~~~~~~~l~-~L~~L~L~~N--~l~-~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~-l~~~~~~~ 257 (652)
++..+..++ +|++|++++| .++ +.. |..+..+++|+.|++++|. +++..+..
T Consensus 185 ~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l----------------------~~~~~~~~~L~~L~l~~~~~l~~~~~~~ 242 (336)
T 2ast_B 185 HVQVAVAHVSETITQLNLSGYRKNLQKSDL----------------------STLVRRCPNLVHLDLSDSVMLKNDCFQE 242 (336)
T ss_dssp HHHHHHHHSCTTCCEEECCSCGGGSCHHHH----------------------HHHHHHCTTCSEEECTTCTTCCGGGGGG
T ss_pred HHHHHHHhcccCCCEEEeCCCcccCCHHHH----------------------HHHHhhCCCCCEEeCCCCCcCCHHHHHH
Confidence 334444455 5555555555 222 222 3334445555555555555 44445556
Q ss_pred ccCCCCCcEEEccCCc-CCCcccccccccccCcceeccccccCCCCchhhcCC-CCCceEEeecCcCcccCCC
Q 041689 258 IGSLKDLQYLFLGYNI-LKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKL-SYLEHLNLSFNKLEGEIPK 328 (652)
Q Consensus 258 ~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~p~ 328 (652)
+..+++|++|++++|. +.......+..+++|+.|++++| ++. ..+..+ ..+..|++++|.+++..|.
T Consensus 243 l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 243 FFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARP 311 (336)
T ss_dssp GGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCS
T ss_pred HhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCC
Confidence 6666677777777664 22111124566677777777766 332 122222 2355555677777766554
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=8.4e-24 Score=209.39 Aligned_cols=178 Identities=22% Similarity=0.242 Sum_probs=84.9
Q ss_pred CCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEe
Q 041689 95 SLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVG 174 (652)
Q Consensus 95 ~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 174 (652)
+.+.+++++|.++.++.. ++.+|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 15 ~~~~l~~~~~~l~~~p~~-----~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 89 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSG-----IPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLG 89 (251)
T ss_dssp GGTEEECTTCCCSSCCSC-----CCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCeEEecCCCCccccCCC-----CCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEE
Confidence 345555666655554432 122355555555555555555555555555555555555544444455555555555
Q ss_pred cccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCccC
Q 041689 175 LKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVI 254 (652)
Q Consensus 175 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~~ 254 (652)
|++|+|++..+..|..+++|++|+|++|+|+++.+..|.. +++|+.|+|++|+++++.
T Consensus 90 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----------------------l~~L~~L~Ls~N~l~~~~ 147 (251)
T 3m19_A 90 LANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDR----------------------LTKLKELRLNTNQLQSIP 147 (251)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT----------------------CTTCCEEECCSSCCCCCC
T ss_pred CCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhcc----------------------CCcccEEECcCCcCCccC
Confidence 5555554433344444444444444444444333222222 223333333344444444
Q ss_pred cccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccC
Q 041689 255 PTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLS 299 (652)
Q Consensus 255 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 299 (652)
+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+++
T Consensus 148 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 148 AGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred HHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 444555555555555555555444444455555555555555554
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=1.1e-24 Score=222.91 Aligned_cols=222 Identities=18% Similarity=0.201 Sum_probs=186.0
Q ss_pred CcEEEccCCcccccCCc---cccCCCCCCEEEecCccccccCCccc--cCCCCCcEEecccCccccccC----ccccCCC
Q 041689 122 LEIFDMSKCNVSGGIPE---EIGNLTNLTAIYLGGNKLNGSIPFTL--RELQKLQYVGLKDNKLEGTIP----YDIFRLV 192 (652)
Q Consensus 122 L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~l~ 192 (652)
++.|.+.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..+ ..+..++
T Consensus 66 l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~ 145 (310)
T 4glp_A 66 VRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKP 145 (310)
T ss_dssp CCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCS
T ss_pred eeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhcc
Confidence 78888888887632111 13345779999999999999999888 999999999999999997655 4556799
Q ss_pred CCcEEEccCCcccccccccCCCCCCCCEEEccCCCCC----C--CcccCCCCccceEecccccCCccCcc---cccCCCC
Q 041689 193 KLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGP----L--PLEIGNLKVLIGIDFSMNNFSSVIPT---TIGSLKD 263 (652)
Q Consensus 193 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~----~--~~~~~~l~~L~~L~ls~N~l~~~~~~---~~~~l~~ 263 (652)
+|++|+|++|++++..+..|..+++|++|+|++|+.. + +..++.+++|++|++++|+++...+. .+..+++
T Consensus 146 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~ 225 (310)
T 4glp_A 146 GLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQ 225 (310)
T ss_dssp CCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCC
T ss_pred CCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999722 3 23357899999999999999853221 3578899
Q ss_pred CcEEEccCCcCCCccccccccc---ccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCCCCCCCCcccccc
Q 041689 264 LQYLFLGYNILKGSIPDSVGDL---ISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKGGSFGNFSAESF 340 (652)
Q Consensus 264 L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~~~~ 340 (652)
|++|+|++|+|++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|+|++|++++. |....++.++.+++
T Consensus 226 L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~L 301 (310)
T 4glp_A 226 PHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQPDELPEVDNLTL 301 (310)
T ss_dssp CSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CCTTSCCCCSCEEC
T ss_pred CCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-chhhhCCCccEEEC
Confidence 9999999999998878888777 69999999999999 6676664 7999999999999975 44678899999999
Q ss_pred cCCccCC
Q 041689 341 EGNKLLC 347 (652)
Q Consensus 341 ~~N~~~c 347 (652)
++|++..
T Consensus 302 ~~N~l~~ 308 (310)
T 4glp_A 302 DGNPFLV 308 (310)
T ss_dssp SSTTTSC
T ss_pred cCCCCCC
Confidence 9999854
No 342
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.91 E-value=6.2e-24 Score=216.90 Aligned_cols=195 Identities=19% Similarity=0.279 Sum_probs=171.4
Q ss_pred cCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCC
Q 041689 90 LSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQK 169 (652)
Q Consensus 90 l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 169 (652)
+.++++|++|++++|.++.++ .+..+++ |++|+|++|++++..+ +..+++|++|+|++|++++. ..+..+++
T Consensus 37 ~~~l~~L~~L~l~~~~i~~l~---~~~~l~~-L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~ 108 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTTIE---GVQYLNN-LIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQS 108 (308)
T ss_dssp HHHHHTCCEEECTTSCCCCCT---TGGGCTT-CCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTT
T ss_pred HHHcCCcCEEEeeCCCccCch---hhhccCC-CCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCC
Confidence 557889999999999998763 4677776 9999999999997655 99999999999999999964 36999999
Q ss_pred CcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEeccccc
Q 041689 170 LQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNN 249 (652)
Q Consensus 170 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~ 249 (652)
|++|+|++|++++. + .+..+++|++|++++|++++..+ +..+++|++|++++|.......+..+++|+.|++++|+
T Consensus 109 L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 109 IKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNK 184 (308)
T ss_dssp CCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSC
T ss_pred CCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCc
Confidence 99999999999964 4 38999999999999999997665 89999999999999973333339999999999999999
Q ss_pred CCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCC
Q 041689 250 FSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSG 300 (652)
Q Consensus 250 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 300 (652)
+++..+ +..+++|++|+|++|++++..+ +..+++|+.|+|++|++++
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 997644 8899999999999999996553 8999999999999999984
No 343
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=4.9e-26 Score=240.58 Aligned_cols=238 Identities=25% Similarity=0.277 Sum_probs=187.2
Q ss_pred cccCCCCCCcEEEcccCCCcccCCcc---chhcccccCcEEEccCCc---ccccCCccc-------cCCCCCCEEEecCc
Q 041689 88 SSLSNCKSLVVFLLSNNPLNGILPRM---SIGNLSHSLEIFDMSKCN---VSGGIPEEI-------GNLTNLTAIYLGGN 154 (652)
Q Consensus 88 ~~l~~l~~L~~L~Ls~N~l~~~~~~~---~~~~l~~~L~~L~L~~N~---l~~~~~~~~-------~~l~~L~~L~L~~N 154 (652)
..+..+++|++|+|++|.+++..+.. .+..+++ |++|+|++|. +++.+|..+ ..+++|++|+|++|
T Consensus 26 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~-L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n 104 (386)
T 2ca6_A 26 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKD-LEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN 104 (386)
T ss_dssp HHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTT-CCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCC-ccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCC
Confidence 34667889999999999998754331 2445665 9999999964 444555555 78899999999999
Q ss_pred cccc----cCCccccCCCCCcEEecccCccccccCccccC----C---------CCCcEEEccCCccc-cccc---ccCC
Q 041689 155 KLNG----SIPFTLRELQKLQYVGLKDNKLEGTIPYDIFR----L---------VKLYKLDLGGNKLS-GSIL---TCFS 213 (652)
Q Consensus 155 ~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----l---------~~L~~L~L~~N~l~-~~~~---~~~~ 213 (652)
+++. .++..+..+++|++|+|++|.|+...+..+.. + ++|++|+|++|+++ ...+ ..+.
T Consensus 105 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~ 184 (386)
T 2ca6_A 105 AFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ 184 (386)
T ss_dssp CCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHH
Confidence 9986 46778899999999999999997554444443 3 89999999999997 3344 4677
Q ss_pred CCCCCCEEEccCCCCC-------CCcccCCCCccceEecccccCC----ccCcccccCCCCCcEEEccCCcCCCc----c
Q 041689 214 NLASLRTLSLSYNDGP-------LPLEIGNLKVLIGIDFSMNNFS----SVIPTTIGSLKDLQYLFLGYNILKGS----I 278 (652)
Q Consensus 214 ~l~~L~~L~Ls~N~~~-------~~~~~~~l~~L~~L~ls~N~l~----~~~~~~~~~l~~L~~L~L~~N~l~~~----~ 278 (652)
.+++|++|+|++|... .+..+..+++|+.|+|++|.++ ..+|..+..+++|++|+|++|.+++. +
T Consensus 185 ~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l 264 (386)
T 2ca6_A 185 SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAV 264 (386)
T ss_dssp HCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHH
T ss_pred hCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHH
Confidence 8889999999999633 3337888999999999999985 55677888899999999999999865 4
Q ss_pred cccc--cccccCcceeccccccCC----CCchhh-cCCCCCceEEeecCcCcccC
Q 041689 279 PDSV--GDLISLKSLNFSNNNLSG----AIPLLL-EKLSYLEHLNLSFNKLEGEI 326 (652)
Q Consensus 279 p~~~--~~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~L~~N~l~~~~ 326 (652)
+..+ +.+++|+.|+|++|++++ .+|..+ .++++|+.|++++|++++..
T Consensus 265 ~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 265 VDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 5666 338899999999999986 367666 66899999999999988554
No 344
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=2.3e-25 Score=230.75 Aligned_cols=255 Identities=16% Similarity=0.204 Sum_probs=193.0
Q ss_pred eeeeceeEeccCCCcCCccCCCCC-CC--CCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeec-cCCCcccccc
Q 041689 3 SISIGKLELNVDDIESPCEIPSEI-NP--HNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGS-LSSIADNYLT 78 (652)
Q Consensus 3 ~~~l~~l~l~~~~~~~~~~ip~~~-~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~~l~ 78 (652)
|..++.++++.+.+. |..+ .+ ++++.|++++|.+++..+. +..+++|++|+|++|.+++. .+
T Consensus 46 ~~~~~~l~l~~~~~~-----~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~-------- 111 (336)
T 2ast_B 46 ESLWQTLDLTGKNLH-----PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLH-------- 111 (336)
T ss_dssp STTSSEEECTTCBCC-----HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHH--------
T ss_pred chhheeeccccccCC-----HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHH--------
Confidence 344788888887766 2223 33 7999999999999987665 56899999999999998743 22
Q ss_pred CCCCCcccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCC-ccccc-CCccccCCCCCCEEEecCc-c
Q 041689 79 SSTPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKC-NVSGG-IPEEIGNLTNLTAIYLGGN-K 155 (652)
Q Consensus 79 ~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~L~~N-~ 155 (652)
..+.++++|++|+|++|.+++..+. .++.+++ |++|+|++| .+++. ++..+.++++|++|+|++| .
T Consensus 112 ---------~~~~~~~~L~~L~L~~~~l~~~~~~-~l~~~~~-L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~ 180 (336)
T 2ast_B 112 ---------GILSQCSKLQNLSLEGLRLSDPIVN-TLAKNSN-LVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFD 180 (336)
T ss_dssp ---------HHHTTBCCCSEEECTTCBCCHHHHH-HHTTCTT-CSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTT
T ss_pred ---------HHHhhCCCCCEEeCcCcccCHHHHH-HHhcCCC-CCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCC
Confidence 2467899999999999999876665 6777776 999999999 78863 6777999999999999999 9
Q ss_pred cccc-CCccccCCC-CCcEEecccC--ccc-cccCccccCCCCCcEEEccCCc-ccccccccCCCCCCCCEEEccCCCCC
Q 041689 156 LNGS-IPFTLRELQ-KLQYVGLKDN--KLE-GTIPYDIFRLVKLYKLDLGGNK-LSGSILTCFSNLASLRTLSLSYNDGP 229 (652)
Q Consensus 156 l~~~-~~~~~~~l~-~L~~L~L~~N--~l~-~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~~~ 229 (652)
+++. .+..+..++ +|++|+|++| .++ +.+|..+..+++|+.|++++|. +++..+..+..+++|++|++++|...
T Consensus 181 l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~ 260 (336)
T 2ast_B 181 FTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDI 260 (336)
T ss_dssp CCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTC
T ss_pred cChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCC
Confidence 9854 577789999 9999999999 455 4667788889999999999999 77777778888888888888877422
Q ss_pred CCcccCCCCccceEecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccc-cCcceeccccccCCCCchhhc
Q 041689 230 LPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLI-SLKSLNFSNNNLSGAIPLLLE 307 (652)
Q Consensus 230 ~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~ 307 (652)
.+.. ...+..+++|+.|++++| ++ ...+..+. +|..|++++|++++..|..+.
T Consensus 261 ~~~~---------------------~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 261 IPET---------------------LLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp CGGG---------------------GGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred CHHH---------------------HHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCccc
Confidence 2211 123445666666666666 22 22344442 366677777777776666554
No 345
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.90 E-value=3.1e-24 Score=215.60 Aligned_cols=166 Identities=15% Similarity=0.086 Sum_probs=130.2
Q ss_pred cHHHHHHHhcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccc------------------hhhhhHHHHHHHHHh
Q 041689 416 SYLEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCG------------------RAFKSFDIECEIMKS 477 (652)
Q Consensus 416 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~ 477 (652)
.+..+......|.+.+.||+|+||.||+|++.+|+.||+|+++.... .....+.+|++++++
T Consensus 81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 34455566677888899999999999999997799999999964321 134568899999999
Q ss_pred cCCCeeeeEEeeeecCCceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCee
Q 041689 478 IHYRNLVKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVL 557 (652)
Q Consensus 478 l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIl 557 (652)
++| +++.+++.. +..++||||++|++|.+ +.. .+...++.|++.||+|||++ ||+||||||+||+
T Consensus 161 l~~---~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NIL 225 (282)
T 1zar_A 161 LQG---LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVL 225 (282)
T ss_dssp TTT---SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEE
T ss_pred ccC---CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEE
Confidence 994 555554433 55699999999999998 432 12446999999999999999 9999999999999
Q ss_pred eCCCCcEEEecccCCccccCCCCccccccccCCccccCcccccc----------CccCcccchhh
Q 041689 558 LDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGRE----------GRVFANGDVYS 612 (652)
Q Consensus 558 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~sDvws 612 (652)
++ ++.+||+|||+++.. ..|+|||++.. ..|+..+|+|.
T Consensus 226 l~-~~~vkl~DFG~a~~~---------------~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSVEV---------------GEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp EE-TTEEEECCCTTCEET---------------TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred EE-CCcEEEEECCCCeEC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 99 999999999999742 34788997653 34556667664
No 346
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.89 E-value=8.7e-23 Score=195.98 Aligned_cols=182 Identities=23% Similarity=0.224 Sum_probs=142.8
Q ss_pred eceeEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcc
Q 041689 6 IGKLELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELS 85 (652)
Q Consensus 6 l~~l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~ 85 (652)
.+.++.+.+.+. ++|..+ +++|++|+|++|+++++.+..|.++++|++|+|++|+|+++++.
T Consensus 9 ~~~v~c~~~~l~---~~p~~~-~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-------------- 70 (208)
T 2o6s_A 9 GTTVECYSQGRT---SVPTGI-PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG-------------- 70 (208)
T ss_dssp TTEEECCSSCCS---SCCSCC-CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT--------------
T ss_pred CCEEEecCCCcc---CCCCCC-CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh--------------
Confidence 455666666655 688777 67899999999999887777888899999999999988865542
Q ss_pred cccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCcccc
Q 041689 86 FLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLR 165 (652)
Q Consensus 86 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 165 (652)
.|.++++|++|+|++|+++++++. .+..+++ |++|+|++|+|++..+..|..+++|++|+|++|++++..+..|.
T Consensus 71 ---~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 145 (208)
T 2o6s_A 71 ---VFNKLTSLTYLNLSTNQLQSLPNG-VFDKLTQ-LKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFD 145 (208)
T ss_dssp ---TTTTCTTCCEEECCSSCCCCCCTT-TTTTCTT-CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred ---hcCCCCCcCEEECCCCcCCccCHh-HhcCccC-CCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhc
Confidence 367788889999999988877665 5677776 88888888888877777788888888888888888877777788
Q ss_pred CCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCC
Q 041689 166 ELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLAS 217 (652)
Q Consensus 166 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 217 (652)
.+++|++|+|++|.+.+. +++|++|+++.|+++|.+|..++.++.
T Consensus 146 ~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 146 RLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred cCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCCceeeccCccccC
Confidence 888888888888877643 346788888888888887777665543
No 347
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=4.1e-22 Score=191.28 Aligned_cols=130 Identities=22% Similarity=0.204 Sum_probs=71.1
Q ss_pred CCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEe
Q 041689 95 SLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVG 174 (652)
Q Consensus 95 ~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 174 (652)
+|++|+|++|+++++++. .+..+++ |++|++++|+|+++.+..|..+++|++|+|++|+|++..+..|.++++|++|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~-~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNG-VFDELTS-LTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp TCSEEECCSSCCCCCCTT-TTTTCTT-CSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcEEEcCCCccCcCChh-hhccccc-CcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 455556666655555443 3444443 55555555555555444555555555555555555554444555555555555
Q ss_pred cccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCC
Q 041689 175 LKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYN 226 (652)
Q Consensus 175 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 226 (652)
|++|+|++..+..|..+++|++|+|++|+++++.+..|..+++|++|++++|
T Consensus 107 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 158 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 158 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSC
T ss_pred cCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCC
Confidence 5555555444444555555555555555555554444555555555555554
No 348
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.88 E-value=3.3e-24 Score=239.80 Aligned_cols=233 Identities=15% Similarity=0.109 Sum_probs=139.4
Q ss_pred ccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCC-ccccCCCCCCEEEecCcccc-ccCCccccC
Q 041689 89 SLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIP-EEIGNLTNLTAIYLGGNKLN-GSIPFTLRE 166 (652)
Q Consensus 89 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~ 166 (652)
.+..+++|+.|+++++....+ +. .+..+++ |++|+|++|.+++... ..+..+++|++|+|+ |.+. ..++..+..
T Consensus 265 ~l~~~~~L~~L~l~~~~~~~l-~~-~~~~~~~-L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~ 340 (592)
T 3ogk_B 265 NLVFPRKLCRLGLSYMGPNEM-PI-LFPFAAQ-IRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQY 340 (592)
T ss_dssp CCCCCTTCCEEEETTCCTTTG-GG-GGGGGGG-CCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHH
T ss_pred HhhccccccccCccccchhHH-HH-HHhhcCC-CcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHh
Confidence 455566666666666543332 22 3445554 7777777777654433 335677777777777 3333 223333456
Q ss_pred CCCCcEEecc-----------cCccccccC-ccccCCCCCcEEEccCCcccccccccCCC-CCCCCEEEcc----CCC-C
Q 041689 167 LQKLQYVGLK-----------DNKLEGTIP-YDIFRLVKLYKLDLGGNKLSGSILTCFSN-LASLRTLSLS----YND-G 228 (652)
Q Consensus 167 l~~L~~L~L~-----------~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~Ls----~N~-~ 228 (652)
+++|++|+|+ .|.+++... ..+..+++|++|+++.|.+++..+..+.. +++|++|+++ .|. .
T Consensus 341 ~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~ 420 (592)
T 3ogk_B 341 CKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERIT 420 (592)
T ss_dssp CTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCS
T ss_pred CCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCcccc
Confidence 6777777777 356654322 22344677777777777777655555554 7777777775 332 2
Q ss_pred CCC------cccCCCCccceEecccc--cCCccCccccc-CCCCCcEEEccCCcCCC-cccccccccccCcceecccccc
Q 041689 229 PLP------LEIGNLKVLIGIDFSMN--NFSSVIPTTIG-SLKDLQYLFLGYNILKG-SIPDSVGDLISLKSLNFSNNNL 298 (652)
Q Consensus 229 ~~~------~~~~~l~~L~~L~ls~N--~l~~~~~~~~~-~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l 298 (652)
..| ..+.++++|+.|+++.| .+++..+..+. .+++|++|+|++|++++ .++..+..+++|+.|+|++|.+
T Consensus 421 ~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l 500 (592)
T 3ogk_B 421 DLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCF 500 (592)
T ss_dssp SCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCC
T ss_pred CchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCC
Confidence 111 22555777777777643 35543333333 36777777777777765 2344456677777777777777
Q ss_pred CCC-CchhhcCCCCCceEEeecCcCccc
Q 041689 299 SGA-IPLLLEKLSYLEHLNLSFNKLEGE 325 (652)
Q Consensus 299 ~~~-~~~~~~~l~~L~~L~L~~N~l~~~ 325 (652)
++. ++..+..+++|+.|+|++|+++..
T Consensus 501 ~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 501 SERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp BHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred cHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 543 334445677777777777777643
No 349
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.87 E-value=6.3e-25 Score=245.67 Aligned_cols=39 Identities=8% Similarity=-0.024 Sum_probs=17.5
Q ss_pred cccCcceeccccccCC-CCchhhcCCCCCceEEeecCcCc
Q 041689 285 LISLKSLNFSNNNLSG-AIPLLLEKLSYLEHLNLSFNKLE 323 (652)
Q Consensus 285 l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~ 323 (652)
+++|+.|+|++|++++ .++..+..+++|+.|++++|+++
T Consensus 462 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 501 (592)
T 3ogk_B 462 SPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFS 501 (592)
T ss_dssp CTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCB
T ss_pred CccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCc
Confidence 3444444554444443 12233344445555555555443
No 350
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.87 E-value=6.7e-22 Score=206.63 Aligned_cols=174 Identities=26% Similarity=0.206 Sum_probs=120.7
Q ss_pred CEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccC-CCCCCcEEEcccCCCcccC
Q 041689 32 EELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLS-NCKSLVVFLLSNNPLNGIL 110 (652)
Q Consensus 32 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~-~l~~L~~L~Ls~N~l~~~~ 110 (652)
+.+++++|+++. +|..+. +.++.|+|++|+|+++.+. .|. ++++|++|+|++|+|+++.
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~-----------------~~~~~l~~L~~L~L~~N~i~~i~ 80 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAE-----------------WTPTRLTNLHSLLLSHNHLNFIS 80 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTT-----------------SSSSCCTTCCEEECCSSCCCEEC
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChh-----------------hhhhcccccCEEECCCCcCCccC
Confidence 567777777764 454443 3467777777777665543 244 6677777777777777776
Q ss_pred CccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccc--
Q 041689 111 PRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDI-- 188 (652)
Q Consensus 111 ~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-- 188 (652)
+. .|..+++ |++|+|++|+|+++.+..|.++++|+.|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|
T Consensus 81 ~~-~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~ 158 (361)
T 2xot_A 81 SE-AFVPVPN-LRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKD 158 (361)
T ss_dssp TT-TTTTCTT-CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC-
T ss_pred hh-hccCCCC-CCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcC
Confidence 65 5666665 7777777777777767777777777777777777777777777777777777777777774433334
Q ss_pred -cCCCCCcEEEccCCcccccccccCCCCCC--CCEEEccCCC
Q 041689 189 -FRLVKLYKLDLGGNKLSGSILTCFSNLAS--LRTLSLSYND 227 (652)
Q Consensus 189 -~~l~~L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~Ls~N~ 227 (652)
..+++|+.|+|++|+|+++.+..|..++. |+.|+|++|.
T Consensus 159 ~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~ 200 (361)
T 2xot_A 159 GNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNP 200 (361)
T ss_dssp ---CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSC
T ss_pred cccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCC
Confidence 45777888888888887776677777766 3778888874
No 351
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=1.1e-21 Score=214.99 Aligned_cols=187 Identities=20% Similarity=0.256 Sum_probs=144.1
Q ss_pred CCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEe
Q 041689 95 SLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVG 174 (652)
Q Consensus 95 ~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 174 (652)
+|+.|+|++|.|+++++. +. + +|++|+|++|+|+. +| ..+++|++|+|++|+|++ +|. |.+ +|++|+
T Consensus 60 ~L~~L~Ls~n~L~~lp~~--l~--~-~L~~L~Ls~N~l~~-ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~ 126 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDN--LP--P-QITVLEITQNALIS-LP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLD 126 (571)
T ss_dssp TCSEEECCSSCCSCCCSC--CC--T-TCSEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEE
T ss_pred CccEEEeCCCCCCccCHh--Hc--C-CCCEEECcCCCCcc-cc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEE
Confidence 899999999999986554 21 3 49999999999984 55 457899999999999987 555 655 899999
Q ss_pred cccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCCcccCCCCccceEecccccCCcc
Q 041689 175 LKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEIGNLKVLIGIDFSMNNFSSV 253 (652)
Q Consensus 175 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~~~~~l~~L~~L~ls~N~l~~~ 253 (652)
|++|+|++ +|. .+++|+.|+|++|+|++++ . .+++|++|+|++|. ..+|. +. ++|+.|+|++|+|+.
T Consensus 127 Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp-~---~l~~L~~L~Ls~N~L~~lp~-l~--~~L~~L~Ls~N~L~~- 194 (571)
T 3cvr_A 127 VDNNQLTM-LPE---LPALLEYINADNNQLTMLP-E---LPTSLEVLSVRNNQLTFLPE-LP--ESLEALDVSTNLLES- 194 (571)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSCCC-C---CCTTCCEEECCSSCCSCCCC-CC--TTCCEEECCSSCCSS-
T ss_pred CCCCcCCC-CCC---cCccccEEeCCCCccCcCC-C---cCCCcCEEECCCCCCCCcch-hh--CCCCEEECcCCCCCc-
Confidence 99999986 565 5788999999999998744 3 56788888888886 44666 55 788888888888885
Q ss_pred CcccccCCCCC-------cEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCC
Q 041689 254 IPTTIGSLKDL-------QYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLS 310 (652)
Q Consensus 254 ~~~~~~~l~~L-------~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 310 (652)
+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..+.
T Consensus 195 lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 195 LPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred hhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 444 554 66 88888888888 5677777788888888888888887777776543
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=2.7e-21 Score=211.89 Aligned_cols=181 Identities=23% Similarity=0.297 Sum_probs=153.8
Q ss_pred cCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccccCCCCCcEEEcc
Q 041689 121 SLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLG 200 (652)
Q Consensus 121 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 200 (652)
+|+.|+|++|+|++ +|..+ .++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.. +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 49999999999997 55544 389999999999999 455 457999999999999996 776 665 99999999
Q ss_pred CCcccccccccCCCCCCCCEEEccCCC-CCCCcccCCCCccceEecccccCCccCcccccCCCCCcEEEccCCcCCCccc
Q 041689 201 GNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIP 279 (652)
Q Consensus 201 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 279 (652)
+|+|++++ . .+++|+.|+|++|. ..+|. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|
T Consensus 129 ~N~l~~lp-~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 129 NNQLTMLP-E---LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SSCCSCCC-C---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CCcCCCCC-C---cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 99999844 4 68999999999997 44665 67899999999999998 555 66 89999999999999 666
Q ss_pred ccccccccC-------cceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCC
Q 041689 280 DSVGDLISL-------KSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPK 328 (652)
Q Consensus 280 ~~~~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 328 (652)
. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|.
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp C-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred h-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 6 665 77 99999999999 5777777899999999999999987664
No 353
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.86 E-value=7.2e-22 Score=191.11 Aligned_cols=156 Identities=22% Similarity=0.267 Sum_probs=107.3
Q ss_pred CEEEecCccccccCCccccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCC
Q 041689 147 TAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYN 226 (652)
Q Consensus 147 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 226 (652)
+.+++++|.++. +|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|+|+++.|..|.++++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L-------- 82 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL-------- 82 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSC--------
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCC--------
Confidence 456777777763 343332 456666666666665555566666666666666666665555555555554
Q ss_pred CCCCCcccCCCCccceEecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhh
Q 041689 227 DGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLL 306 (652)
Q Consensus 227 ~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 306 (652)
+.|+|++|+|+++.+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|
T Consensus 83 --------------~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 148 (220)
T 2v9t_B 83 --------------NSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF 148 (220)
T ss_dssp --------------CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTT
T ss_pred --------------CEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHH
Confidence 555555566666666667777888888888888887777778888888888888888887777777
Q ss_pred cCCCCCceEEeecCcCcccCC
Q 041689 307 EKLSYLEHLNLSFNKLEGEIP 327 (652)
Q Consensus 307 ~~l~~L~~L~L~~N~l~~~~p 327 (652)
..+++|+.|+|++|+|.|...
T Consensus 149 ~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 149 SPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp TTCTTCCEEECCSSCEECSGG
T ss_pred hCCCCCCEEEeCCCCcCCCCc
Confidence 888888888888888876543
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.86 E-value=5.6e-22 Score=200.56 Aligned_cols=192 Identities=25% Similarity=0.356 Sum_probs=115.5
Q ss_pred CCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcE
Q 041689 93 CKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQY 172 (652)
Q Consensus 93 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 172 (652)
+.++..+.+..+.+++..+ ...+++ |+.|++++|.++.. + .+..+++|++|+|++|++++..+ +..+++|++
T Consensus 23 l~~~~~~~l~~~~~~~~~~---~~~l~~-L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~ 94 (291)
T 1h6t_A 23 FAETIKDNLKKKSVTDAVT---QNELNS-IDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGW 94 (291)
T ss_dssp HHHHHHHHTTCSCTTSEEC---HHHHHT-CCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred HHHHHHHHhcCCCcccccc---hhhcCc-ccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCE
Confidence 3445555666666665432 345554 77777777777754 2 36777777777777777775444 777777777
Q ss_pred EecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCc
Q 041689 173 VGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSS 252 (652)
Q Consensus 173 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~ 252 (652)
|+|++|++++ +| .+..+++|++|+|++|++++. ..+..+++|++|++++ |++++
T Consensus 95 L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~----------------------n~l~~ 148 (291)
T 1h6t_A 95 LFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGN----------------------NKITD 148 (291)
T ss_dssp EECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCS----------------------SCCCC
T ss_pred EECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccC----------------------CcCCc
Confidence 7777777764 33 366677777777777777643 2344555555555554 44444
Q ss_pred cCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcc
Q 041689 253 VIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEG 324 (652)
Q Consensus 253 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 324 (652)
. ..+..+++|++|+|++|++++..| +..+++|+.|+|++|+|++. + .+..+++|+.|++++|+++.
T Consensus 149 ~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 149 I--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred c--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 3 345555556666666665554333 55555666666666666532 2 25556666666666666554
No 355
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.86 E-value=6.5e-22 Score=191.41 Aligned_cols=156 Identities=23% Similarity=0.240 Sum_probs=114.7
Q ss_pred CEEEecCccccccCCccccCCCCCcEEecccCccccccC-ccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccC
Q 041689 147 TAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIP-YDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSY 225 (652)
Q Consensus 147 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 225 (652)
+.+++++|.++. +|..+. +.+++|+|++|+|++..+ ..|..+++|++|+|++|+|+++.+..|..+++|
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L------- 83 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGV------- 83 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTC-------
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCC-------
Confidence 477778887774 444432 245677777777775544 346677777777777777776665555555555
Q ss_pred CCCCCCcccCCCCccceEecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchh
Q 041689 226 NDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLL 305 (652)
Q Consensus 226 N~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 305 (652)
+.|+|++|+++++.+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..
T Consensus 84 ---------------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 148 (220)
T 2v70_A 84 ---------------NEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGA 148 (220)
T ss_dssp ---------------CEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTT
T ss_pred ---------------CEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHH
Confidence 45555566677777777888888888888888888777888888888888888888888777888
Q ss_pred hcCCCCCceEEeecCcCcccCC
Q 041689 306 LEKLSYLEHLNLSFNKLEGEIP 327 (652)
Q Consensus 306 ~~~l~~L~~L~L~~N~l~~~~p 327 (652)
|..+++|+.|+|++|+|+|.++
T Consensus 149 ~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 149 FDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTTCTTCCEEECCSCCEECSGG
T ss_pred hcCCCCCCEEEecCcCCcCCCc
Confidence 8888888888888888887665
No 356
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.86 E-value=3.6e-21 Score=194.65 Aligned_cols=191 Identities=22% Similarity=0.293 Sum_probs=137.5
Q ss_pred CcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccccCCCCCcEEEccC
Q 041689 122 LEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGG 201 (652)
Q Consensus 122 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 201 (652)
+..+.+..+.++...+ +..+++|+.|++++|.++.. + .+..+++|++|+|++|++++..+ +..+++|++|+|++
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 4444555665554322 34566666666666666633 2 25566666666666666664332 55556666666666
Q ss_pred CcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCccCcccccCCCCCcEEEccCCcCCCccccc
Q 041689 202 NKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDS 281 (652)
Q Consensus 202 N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 281 (652)
|++++ +..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++. ..
T Consensus 100 n~l~~------------------------~~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~ 151 (291)
T 1h6t_A 100 NKVKD------------------------LSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TV 151 (291)
T ss_dssp SCCCC------------------------GGGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GG
T ss_pred CcCCC------------------------ChhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hh
Confidence 65553 22355566666777777777764 4688899999999999999965 57
Q ss_pred ccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCCCCCCCCcccccccCCccCCCC
Q 041689 282 VGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGS 349 (652)
Q Consensus 282 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~~~~~~N~~~c~~ 349 (652)
+..+++|+.|+|++|++++..+ +..+++|+.|++++|.+++. |....+.+++.+++.+|++.+.+
T Consensus 152 l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~~l~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 152 LSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp GGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEEEEEEEEECCC
T ss_pred hccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-hhhccCCCCCEEECcCCcccCCc
Confidence 9999999999999999997665 89999999999999999975 55788899999999999987643
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.85 E-value=5.8e-21 Score=184.69 Aligned_cols=114 Identities=23% Similarity=0.250 Sum_probs=64.6
Q ss_pred cCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCC
Q 041689 90 LSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQK 169 (652)
Q Consensus 90 l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 169 (652)
|.++++|++|+|++|+|+++.+. .|..+++ |++|+|++|+|+.+.+..|.++++|++|+|++|+|++..|..|..+++
T Consensus 52 ~~~l~~L~~L~Ls~N~i~~~~~~-~~~~l~~-L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 129 (220)
T 2v9t_B 52 FSPYKKLRRIDLSNNQISELAPD-AFQGLRS-LNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHN 129 (220)
T ss_dssp STTCTTCCEEECCSSCCCEECTT-TTTTCSS-CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hhCCCCCCEEECCCCcCCCcCHH-HhhCCcC-CCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCC
Confidence 44445555555555555554444 4444443 555555555555444455555666666666666666555555666666
Q ss_pred CcEEecccCccccccCccccCCCCCcEEEccCCccc
Q 041689 170 LQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLS 205 (652)
Q Consensus 170 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 205 (652)
|++|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 130 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 130 LNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 666666666666555555556666666666666654
No 358
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.85 E-value=2.1e-21 Score=202.85 Aligned_cols=177 Identities=27% Similarity=0.231 Sum_probs=136.1
Q ss_pred CcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCcccc-CCCCCCEEEecCccccccCCccccCCCCCcEEe
Q 041689 96 LVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIG-NLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVG 174 (652)
Q Consensus 96 L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 174 (652)
-+.+++++|.|+.++.. ++..++.|+|++|+|+++.+..|. ++++|++|+|++|+|+++.+..|.++++|++|+
T Consensus 20 ~~~l~c~~~~l~~iP~~-----~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~ 94 (361)
T 2xot_A 20 SNILSCSKQQLPNVPQS-----LPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLD 94 (361)
T ss_dssp TTEEECCSSCCSSCCSS-----CCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCEEEeCCCCcCccCcc-----CCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEE
Confidence 36889999999877553 344588999999999988888887 889999999999999888888888899999999
Q ss_pred cccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCccC
Q 041689 175 LKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVI 254 (652)
Q Consensus 175 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~~ 254 (652)
|++|+|++..+..|..+++|++|+|++|+|+++.+..|..+++|++|+|++| +|+++.
T Consensus 95 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N----------------------~l~~l~ 152 (361)
T 2xot_A 95 LSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQN----------------------QISRFP 152 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS----------------------CCCSCC
T ss_pred CCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCC----------------------cCCeeC
Confidence 9999998777777888888888888888888777777777766666666655 454444
Q ss_pred cccc---cCCCCCcEEEccCCcCCCccccccccccc--CcceeccccccC
Q 041689 255 PTTI---GSLKDLQYLFLGYNILKGSIPDSVGDLIS--LKSLNFSNNNLS 299 (652)
Q Consensus 255 ~~~~---~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~ 299 (652)
+..| ..+++|+.|+|++|+|++..+..+..++. |+.|+|++|.+.
T Consensus 153 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 153 VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp GGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred HHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 4444 45777777888888777655566777766 477888888876
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.85 E-value=1.2e-21 Score=216.91 Aligned_cols=192 Identities=19% Similarity=0.234 Sum_probs=110.0
Q ss_pred CCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCc
Q 041689 28 PHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLN 107 (652)
Q Consensus 28 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 107 (652)
+.++..+.++.+.++.+.+ +..+++|+.|+|++|.|+.+. .+..+++|+.|+|++|+|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l~-------------------~l~~l~~L~~L~Ls~N~l~ 78 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQ-------------------GIQYLPNVTKLFLNGNKLT 78 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCCT-------------------TGGGCTTCCEEECTTSCCC
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCCh-------------------HHccCCCCCEEEeeCCCCC
Confidence 3445555666666654433 455666666666666664321 2455666666666666666
Q ss_pred ccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCcc
Q 041689 108 GILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYD 187 (652)
Q Consensus 108 ~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 187 (652)
++++ +..+++ |+.|+|++|+|++. +.+..+++|+.|+|++|+|+++ ..+..+++|+.|+|++|+|++. ..
T Consensus 79 ~~~~---l~~l~~-L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~ 148 (605)
T 1m9s_A 79 DIKP---LTNLKN-LGWLFLDENKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TV 148 (605)
T ss_dssp CCGG---GGGCTT-CCEEECCSSCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GG
T ss_pred CChh---hccCCC-CCEEECcCCCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hh
Confidence 5543 445554 66666666666642 2466666666666666666642 2456666666666666666643 45
Q ss_pred ccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCc
Q 041689 188 IFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSS 252 (652)
Q Consensus 188 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~ 252 (652)
+..+++|+.|+|++|+|++..| +..+++|+.|+|++|...-...+..+++|+.|+|++|.+.+
T Consensus 149 l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 149 LSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp GGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCSEEEEC
T ss_pred hcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCChHHccCCCCCEEEccCCcCcC
Confidence 6666666666666666665544 55666666666666542222345555555555555555554
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.85 E-value=1.1e-20 Score=182.64 Aligned_cols=131 Identities=20% Similarity=0.219 Sum_probs=88.1
Q ss_pred CcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEec
Q 041689 96 LVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGL 175 (652)
Q Consensus 96 L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 175 (652)
+++|+|++|+|+++.+...|..+++ |++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~-L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQ-LRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTT-CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCEEEcCCCcCCccCchhhhccCCC-CCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 4667777777776654434566665 777777777777666666777777777777777776666666677777777777
Q ss_pred ccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC
Q 041689 176 KDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND 227 (652)
Q Consensus 176 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 227 (652)
++|+|++..|..|..+++|++|+|++|+|+++.|..|..+++|++|+|++|.
T Consensus 113 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 164 (220)
T 2v70_A 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANP 164 (220)
T ss_dssp TTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred CCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcC
Confidence 7777776666666667777777777777766666666666666666666653
No 361
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.84 E-value=6.9e-21 Score=210.93 Aligned_cols=194 Identities=23% Similarity=0.323 Sum_probs=139.9
Q ss_pred CCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCc
Q 041689 92 NCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQ 171 (652)
Q Consensus 92 ~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 171 (652)
.+.++..+.++.+.+.++.+ +..++. |+.|++++|.|..+ + .+..+++|+.|+|++|+|++..+ +..+++|+
T Consensus 19 ~l~~l~~l~l~~~~i~~~~~---~~~L~~-L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~ 90 (605)
T 1m9s_A 19 AFAETIKDNLKKKSVTDAVT---QNELNS-IDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLG 90 (605)
T ss_dssp HHHHHHHHHTTCSCTTSEEC---HHHHTT-CCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCC
T ss_pred HHHHHHHHhccCCCcccccc---hhcCCC-CCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCC
Confidence 34566677788888776643 455665 88888888888854 3 57888888888888888886555 78888888
Q ss_pred EEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCC
Q 041689 172 YVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFS 251 (652)
Q Consensus 172 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~ 251 (652)
.|+|++|+|++ +| .+..+++|+.|+|++|+|+++ ..+..+++|+.|+|++|.......+..+++|+.|+|++|+|+
T Consensus 91 ~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~ 166 (605)
T 1m9s_A 91 WLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQIS 166 (605)
T ss_dssp EEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGGSCTTCSEEECCSSCCC
T ss_pred EEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCchhhcccCCCCEEECcCCcCC
Confidence 88888888874 33 677888888888888888754 347777777777777776333356677777777777777777
Q ss_pred ccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCC
Q 041689 252 SVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGA 301 (652)
Q Consensus 252 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 301 (652)
+..| +..+++|+.|+|++|+|++. | .+..+++|+.|+|++|++++.
T Consensus 167 ~~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 167 DIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEECC
T ss_pred Cchh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcCC
Confidence 6544 66777777777777777643 3 466677777777777777643
No 362
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=3.8e-20 Score=180.23 Aligned_cols=151 Identities=24% Similarity=0.289 Sum_probs=83.0
Q ss_pred ceeEeccCCCcCCccCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCccc
Q 041689 7 GKLELNVDDIESPCEIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSF 86 (652)
Q Consensus 7 ~~l~l~~~~~~~~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~ 86 (652)
+.++.+.+.+. ++|..+ +++|++|+|++|+|+++.|..|.++++|++|+|++|+|+.+++.
T Consensus 22 ~~v~c~~~~l~---~ip~~~-~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~--------------- 82 (229)
T 3e6j_A 22 TTVDCRSKRHA---SVPAGI-PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVG--------------- 82 (229)
T ss_dssp TEEECTTSCCS---SCCSCC-CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT---------------
T ss_pred CEeEccCCCcC---ccCCCC-CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChh---------------
Confidence 34444444444 566555 45666666666666666566666666666666666666544332
Q ss_pred ccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccC
Q 041689 87 LSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRE 166 (652)
Q Consensus 87 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 166 (652)
.|.++++|++|+|++|+|+++++. .+..+++ |++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..
T Consensus 83 --~~~~l~~L~~L~Ls~N~l~~l~~~-~~~~l~~-L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 157 (229)
T 3e6j_A 83 --VFDSLTQLTVLDLGTNQLTVLPSA-VFDRLVH-LKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDR 157 (229)
T ss_dssp --TTTTCTTCCEEECCSSCCCCCCTT-TTTTCTT-CCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTT
T ss_pred --hcccCCCcCEEECCCCcCCccChh-HhCcchh-hCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhC
Confidence 245555666666666666555443 3444443 555555555555 34445555555555555555555444444555
Q ss_pred CCCCcEEecccCccc
Q 041689 167 LQKLQYVGLKDNKLE 181 (652)
Q Consensus 167 l~~L~~L~L~~N~l~ 181 (652)
+++|+.|+|++|.+.
T Consensus 158 l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 158 LSSLTHAYLFGNPWD 172 (229)
T ss_dssp CTTCCEEECTTSCBC
T ss_pred CCCCCEEEeeCCCcc
Confidence 555555555555554
No 363
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=7.3e-20 Score=178.16 Aligned_cols=156 Identities=25% Similarity=0.309 Sum_probs=109.6
Q ss_pred CCEEEecCccccccCCccccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccC
Q 041689 146 LTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSY 225 (652)
Q Consensus 146 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 225 (652)
-+.++.++|.++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|+.+.+..|
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~------------- 84 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVF------------- 84 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT-------------
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhc-------------
Confidence 455666666666 3333222 556666666666665555556666666666666666654444444
Q ss_pred CCCCCCcccCCCCccceEecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchh
Q 041689 226 NDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLL 305 (652)
Q Consensus 226 N~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 305 (652)
..+++|+.|+|++|+|+++.+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..
T Consensus 85 ---------~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~ 154 (229)
T 3e6j_A 85 ---------DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGA 154 (229)
T ss_dssp ---------TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTT
T ss_pred ---------ccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHH
Confidence 44555555666667777777777888888888888888888 67788888888889999999888777777
Q ss_pred hcCCCCCceEEeecCcCcccCC
Q 041689 306 LEKLSYLEHLNLSFNKLEGEIP 327 (652)
Q Consensus 306 ~~~l~~L~~L~L~~N~l~~~~p 327 (652)
|..+++|+.|+|++|++.|.++
T Consensus 155 ~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 155 FDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp TTTCTTCCEEECTTSCBCTTBG
T ss_pred HhCCCCCCEEEeeCCCccCCcc
Confidence 8888889999999998887765
No 364
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.82 E-value=1.3e-22 Score=227.00 Aligned_cols=250 Identities=12% Similarity=0.066 Sum_probs=119.2
Q ss_pred CCCCCcEEEcccCC--CcccCCccchhcccccCcEEEccCC-cccccCCccccCCCCCCEEEecCcc-------------
Q 041689 92 NCKSLVVFLLSNNP--LNGILPRMSIGNLSHSLEIFDMSKC-NVSGGIPEEIGNLTNLTAIYLGGNK------------- 155 (652)
Q Consensus 92 ~l~~L~~L~Ls~N~--l~~~~~~~~~~~l~~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N~------------- 155 (652)
.+++|+.|+|++|. ++..........+++ |++|++++| .+++ ++..+..+++|+.|+++.+.
T Consensus 182 ~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~-L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~ 259 (594)
T 2p1m_B 182 TYTSLVSLNISCLASEVSFSALERLVTRCPN-LKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSV 259 (594)
T ss_dssp TCCCCCEEECTTCCSCCCHHHHHHHHHHCTT-CCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHH
T ss_pred cCCcCcEEEecccCCcCCHHHHHHHHHhCCC-CcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHH
Confidence 56677777777776 211100001122344 777777777 3333 55555666666666544331
Q ss_pred -------------ccc----cCCccccCCCCCcEEecccCccccccCc-cccCCCCCcEEEccCCccccc-ccccCCCCC
Q 041689 156 -------------LNG----SIPFTLRELQKLQYVGLKDNKLEGTIPY-DIFRLVKLYKLDLGGNKLSGS-ILTCFSNLA 216 (652)
Q Consensus 156 -------------l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~ 216 (652)
+.. .++..+..+++|++|+|++|.+++.... .+..+++|+.|++++| +... .+.....++
T Consensus 260 ~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~ 338 (594)
T 2p1m_B 260 ALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCK 338 (594)
T ss_dssp HHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCT
T ss_pred HHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCC
Confidence 111 1222233567788888888876643322 2446777888887777 4321 222223466
Q ss_pred CCCEEEccC---------CCCC--CCccc-CCCCccceEecccccCCccCccccc-CCCCCcEEEcc--C----CcCCCc
Q 041689 217 SLRTLSLSY---------NDGP--LPLEI-GNLKVLIGIDFSMNNFSSVIPTTIG-SLKDLQYLFLG--Y----NILKGS 277 (652)
Q Consensus 217 ~L~~L~Ls~---------N~~~--~~~~~-~~l~~L~~L~ls~N~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~ 277 (652)
+|++|++++ |... ....+ .++++|+.|+++.|.++......+. .+++|+.|+|+ + |.+++.
T Consensus 339 ~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~ 418 (594)
T 2p1m_B 339 DLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLE 418 (594)
T ss_dssp TCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCC
T ss_pred CCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCC
Confidence 777777733 1100 00011 2355566666666665543333333 35556666665 2 344411
Q ss_pred c-----cccccccccCcceeccccccCCCCchhhcC-CCCCceEEeecCcCcccCCC-C-CCCCCcccccccCCcc
Q 041689 278 I-----PDSVGDLISLKSLNFSNNNLSGAIPLLLEK-LSYLEHLNLSFNKLEGEIPK-G-GSFGNFSAESFEGNKL 345 (652)
Q Consensus 278 ~-----p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~p~-~-~~~~~l~~~~~~~N~~ 345 (652)
. +..+..+++|+.|+|++ .++...+..+.. +++|+.|+|++|.+++..+. . ..+++++.+++++|+.
T Consensus 419 ~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 419 PLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp CTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred chhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 1 11133445555555544 333333333332 44555555555554322110 0 1234455555555543
No 365
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.82 E-value=4.6e-22 Score=222.43 Aligned_cols=334 Identities=15% Similarity=0.130 Sum_probs=189.4
Q ss_pred eeceeEeccCCCcCCccCCCCC--CCCCCCEEECCCC-cCccc-CCccccCCCCCCEEEcCCCcCeeccC----------
Q 041689 5 SIGKLELNVDDIESPCEIPSEI--NPHNLEELLLGQN-NLVGV-VPAAIFDVSTLKDLALQDNYLSGSLS---------- 70 (652)
Q Consensus 5 ~l~~l~l~~~~~~~~~~ip~~~--~~~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~---------- 70 (652)
+|+.|+|+.|.+.. ..+..+ .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++...
T Consensus 106 ~L~~L~L~~~~~~~--~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 106 WLEEIRLKRMVVTD--DCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp TCCEEEEESCBCCH--HHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCeEEeeCcEEcH--HHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 56666666665542 222222 3456666666666 44322 22333456666666666666543211
Q ss_pred -CCccccccCCC--CCcccccc-cCCCCCCcEEEcccC-CCcccCCccchhcccccCcEEEccCCc--------------
Q 041689 71 -SIADNYLTSST--PELSFLSS-LSNCKSLVVFLLSNN-PLNGILPRMSIGNLSHSLEIFDMSKCN-------------- 131 (652)
Q Consensus 71 -~~~~~~l~~~~--~~~~~~~~-l~~l~~L~~L~Ls~N-~l~~~~~~~~~~~l~~~L~~L~L~~N~-------------- 131 (652)
.+....+.... .....+.. ..++++|++|+|++| .+.+ .+. .+..+++ |++|+++.+.
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~-~~~~~~~-L~~L~l~~~~~~~~~~~~~~l~~~ 260 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LAT-LLQRAPQ-LEELGTGGYTAEVRPDVYSGLSVA 260 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHH-HHHHCTT-CSEEECSBCCCCCCHHHHHHHHHH
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHH-HHhcCCc-ceEcccccccCccchhhHHHHHHH
Confidence 11111121111 00011111 234688888888888 4443 222 3445554 7777654431
Q ss_pred ------------cc----ccCCccccCCCCCCEEEecCccccccC-CccccCCCCCcEEecccCccccc-cCccccCCCC
Q 041689 132 ------------VS----GGIPEEIGNLTNLTAIYLGGNKLNGSI-PFTLRELQKLQYVGLKDNKLEGT-IPYDIFRLVK 193 (652)
Q Consensus 132 ------------l~----~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~ 193 (652)
+. ..++..+..+++|++|+|++|.+++.. ...+..+++|++|++++| ++.. ++.....+++
T Consensus 261 l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~ 339 (594)
T 2p1m_B 261 LSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKD 339 (594)
T ss_dssp HHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTT
T ss_pred HhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCC
Confidence 11 123334446788888888888876432 223567888888888887 4422 2222334778
Q ss_pred CcEEEc---------cCCcccccccccCC-CCCCCCEEEccCCCCC--CCccc-CCCCccceEecc--c----ccCCccC
Q 041689 194 LYKLDL---------GGNKLSGSILTCFS-NLASLRTLSLSYNDGP--LPLEI-GNLKVLIGIDFS--M----NNFSSVI 254 (652)
Q Consensus 194 L~~L~L---------~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~~~--~~~~~-~~l~~L~~L~ls--~----N~l~~~~ 254 (652)
|++|++ +.|.+++.....+. .+++|++|.++.|... .+..+ ..+++|+.|+++ + |.++...
T Consensus 340 L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~ 419 (594)
T 2p1m_B 340 LRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEP 419 (594)
T ss_dssp CCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCC
T ss_pred CCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCc
Confidence 888888 33555543333333 3678888877766421 12223 247788888888 4 5565321
Q ss_pred -----cccccCCCCCcEEEccCCcCCCcccccccc-cccCcceeccccccCCCCchhh-cCCCCCceEEeecCcCcccCC
Q 041689 255 -----PTTIGSLKDLQYLFLGYNILKGSIPDSVGD-LISLKSLNFSNNNLSGAIPLLL-EKLSYLEHLNLSFNKLEGEIP 327 (652)
Q Consensus 255 -----~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p 327 (652)
+..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++.....+ ..+++|+.|+|++|++++...
T Consensus 420 ~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~ 498 (594)
T 2p1m_B 420 LDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKAL 498 (594)
T ss_dssp THHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHH
T ss_pred hhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHH
Confidence 12256677888888876 566554445554 7788888888888865444444 567888888888888854322
Q ss_pred --CCCCCCCcccccccCCcc
Q 041689 328 --KGGSFGNFSAESFEGNKL 345 (652)
Q Consensus 328 --~~~~~~~l~~~~~~~N~~ 345 (652)
....+++++.+++++|+.
T Consensus 499 ~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 499 LANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHTGGGGGGSSEEEEESSCC
T ss_pred HHHHHhCCCCCEEeeeCCCC
Confidence 123456778888887765
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=1.5e-22 Score=223.03 Aligned_cols=203 Identities=20% Similarity=0.158 Sum_probs=120.5
Q ss_pred CCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCc-------------ccccCCccccCCCCCCEEE-ecCccc
Q 041689 91 SNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCN-------------VSGGIPEEIGNLTNLTAIY-LGGNKL 156 (652)
Q Consensus 91 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-L~~N~l 156 (652)
..+++|+.|+|++|+|+.+++ .++++++ |+.|++++|. +.+..|..++++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~~Lp~--~i~~l~~-L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~ 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKSTVLQS--ELESCKE-LQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL 422 (567)
T ss_dssp STTTTSSSCCCCHHHHHHHHH--HHHHHHH-HHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH
T ss_pred ccCccceeccCChhhHHhhHH--HHHHHHH-HHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc
Confidence 456666677777777665433 4566655 7777765554 3444555555555555555 444443
Q ss_pred cccCCccccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCCcccC
Q 041689 157 NGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEIG 235 (652)
Q Consensus 157 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~~~~ 235 (652)
. +|..+.+++|.|+...+ ..|+.|+|++|+|+++ |. |..+++|+.|+|++|. ..+|..++
T Consensus 423 ~-----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls~N~l~~lp~~~~ 483 (567)
T 1dce_A 423 D-----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-LEQLLLVTHLDLSHNRLRALPPALA 483 (567)
T ss_dssp H-----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-GGGGTTCCEEECCSSCCCCCCGGGG
T ss_pred c-----------hhhhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-ccccccCcEeecCcccccccchhhh
Confidence 2 23334455555553221 1466777777777653 33 6666666666666665 45566666
Q ss_pred CCCccceEecccccCCccCcccccCCCCCcEEEccCCcCCCcc-cccccccccCcceeccccccCCCCch---hhcCCCC
Q 041689 236 NLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSI-PDSVGDLISLKSLNFSNNNLSGAIPL---LLEKLSY 311 (652)
Q Consensus 236 ~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~ 311 (652)
++++|+.|+|++|+|++ +| .|+.+++|+.|+|++|+|++.. |..+..+++|+.|+|++|+|++.+|. .+..+++
T Consensus 484 ~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~ 561 (567)
T 1dce_A 484 ALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPS 561 (567)
T ss_dssp GCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTT
T ss_pred cCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcc
Confidence 66666666666666665 34 6666667777777777766554 66666666777777777766654442 2334566
Q ss_pred CceEEe
Q 041689 312 LEHLNL 317 (652)
Q Consensus 312 L~~L~L 317 (652)
|+.|++
T Consensus 562 L~~L~l 567 (567)
T 1dce_A 562 VSSILT 567 (567)
T ss_dssp CSEEEC
T ss_pred cCccCC
Confidence 666653
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.82 E-value=1.8e-20 Score=186.45 Aligned_cols=167 Identities=20% Similarity=0.245 Sum_probs=109.8
Q ss_pred CcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccccCCCCCcEEEccC
Q 041689 122 LEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGG 201 (652)
Q Consensus 122 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 201 (652)
+..+++++|.++++. .+..+++|++|++++|.|+. ++ .+..+++|++|+|++|+|++..+ +..+++|++|+|++
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 666777777777543 46677777777777777764 33 56677777777777777774433 66677777777777
Q ss_pred CcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCccCcccccCCCCCcEEEccCCcCCCccccc
Q 041689 202 NKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDS 281 (652)
Q Consensus 202 N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 281 (652)
|+++++.+ +.. ++|+.|++++|++++. ..+..+++|+.|+|++|+|++. + .
T Consensus 95 N~l~~l~~------------------------~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~ 145 (263)
T 1xeu_A 95 NRLKNLNG------------------------IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-M 145 (263)
T ss_dssp SCCSCCTT------------------------CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-G
T ss_pred CccCCcCc------------------------ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-H
Confidence 77664322 111 4555556666666653 2466777777777777777643 3 5
Q ss_pred ccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCccc
Q 041689 282 VGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGE 325 (652)
Q Consensus 282 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 325 (652)
+..+++|+.|+|++|++++. ..+..+++|+.|++++|++++.
T Consensus 146 l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 146 LGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp GGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred HccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 66777777777777777654 5567777777777777777655
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.81 E-value=1.4e-20 Score=187.37 Aligned_cols=169 Identities=22% Similarity=0.261 Sum_probs=123.6
Q ss_pred CCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCc
Q 041689 92 NCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQ 171 (652)
Q Consensus 92 ~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 171 (652)
++.+++.+++++|.++++. .+..+++ |++|++++|+|+.+ + .+..+++|++|+|++|+|++..+ +..+++|+
T Consensus 17 ~l~~l~~l~l~~~~i~~~~---~~~~l~~-L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~ 88 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV---SQKELSG-VQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLE 88 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE---CHHHHTT-CSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCC
T ss_pred HHHHHHHHHhcCCCccccc---chhhcCc-CcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCC
Confidence 5777888999999998875 3667776 99999999999954 4 78999999999999999997665 99999999
Q ss_pred EEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCC
Q 041689 172 YVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFS 251 (652)
Q Consensus 172 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~ 251 (652)
+|+|++|+|++ +|.. .. ++|+.|+|++|+|++. ..+..+++|++|+|++|+......+..+++|+.|++++|+++
T Consensus 89 ~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 89 ELSVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp EEECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCC
T ss_pred EEECCCCccCC-cCcc-cc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCc
Confidence 99999999995 4432 23 8999999999999864 246777777777777665221124555555555555555555
Q ss_pred ccCcccccCCCCCcEEEccCCcCC
Q 041689 252 SVIPTTIGSLKDLQYLFLGYNILK 275 (652)
Q Consensus 252 ~~~~~~~~~l~~L~~L~L~~N~l~ 275 (652)
+. ..+..+++|+.|++++|+++
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEE
T ss_pred ch--HHhccCCCCCEEeCCCCccc
Confidence 43 34455555555555555554
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.81 E-value=1.6e-22 Score=222.68 Aligned_cols=189 Identities=22% Similarity=0.178 Sum_probs=154.3
Q ss_pred ccccCcEEEccCCcccccCCccccCCCCCCEEEecCcc-------------ccccCCccccCCCCCcEEe-cccCccccc
Q 041689 118 LSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNK-------------LNGSIPFTLRELQKLQYVG-LKDNKLEGT 183 (652)
Q Consensus 118 l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-L~~N~l~~~ 183 (652)
.++ |+.|+|++|+|+ .+|..+++|++|+.|++++|. +.+..|..+.++++|+.|+ ++.|.+.
T Consensus 348 ~~~-L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-- 423 (567)
T 1dce_A 348 DEQ-LFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-- 423 (567)
T ss_dssp TTT-SSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH--
T ss_pred Ccc-ceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc--
Confidence 344 888888888887 567888888888888887765 3445566666677777776 5666553
Q ss_pred cCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCCcccCCCCccceEecccccCCccCcccccCCC
Q 041689 184 IPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLK 262 (652)
Q Consensus 184 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~ 262 (652)
+|..+.+++|.|+.+.+. .|+.|+|++|. ..+|. ++.+++|+.|+|++|+|+ .+|..|+.++
T Consensus 424 ---------~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 486 (567)
T 1dce_A 424 ---------DLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALR 486 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCT
T ss_pred ---------hhhhhhhhcccccccCcc------CceEEEecCCCCCCCcC-ccccccCcEeecCccccc-ccchhhhcCC
Confidence 344556677777755432 58999999997 55665 999999999999999999 5788999999
Q ss_pred CCcEEEccCCcCCCcccccccccccCcceeccccccCCCC-chhhcCCCCCceEEeecCcCcccCCCC
Q 041689 263 DLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAI-PLLLEKLSYLEHLNLSFNKLEGEIPKG 329 (652)
Q Consensus 263 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p~~ 329 (652)
+|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.. |..+..+++|+.|+|++|++++.+|..
T Consensus 487 ~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 487 CLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp TCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred CCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 99999999999996 67 8999999999999999999887 999999999999999999999888754
No 370
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.80 E-value=3.6e-20 Score=183.75 Aligned_cols=143 Identities=18% Similarity=0.204 Sum_probs=109.4
Q ss_pred HHHHhcCCCccceeccccceEEEEEEe-CCCcE--EEEEEeecccch------------------------hhhhHHHHH
Q 041689 420 VCRATYGFNENNLIGKGGFGTIYKSRI-GDGME--VAVKVFHLQCGR------------------------AFKSFDIEC 472 (652)
Q Consensus 420 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~ 472 (652)
+.....-|.+.+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|+
T Consensus 42 ~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 121 (258)
T 1zth_A 42 LSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEF 121 (258)
T ss_dssp HHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHH
T ss_pred HHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHH
Confidence 333333467889999999999999987 67889 999997543111 113678899
Q ss_pred HHHHhcCCCee--eeEEeeeecCCceEEEEEccCC-C----ChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHH-cCCCC
Q 041689 473 EIMKSIHYRNL--VKIISSCSNEEFKELVLEHMPH-G----SLEKCLYSSNCILDIFQRLNIMIDVASVLEYLH-FNFLV 544 (652)
Q Consensus 473 ~~l~~l~h~ni--v~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~ 544 (652)
++++++.|+++ +.++++ +..++||||+.+ | +|.++... .++..+..++.|++.||.||| +.
T Consensus 122 ~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~--- 190 (258)
T 1zth_A 122 RNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEA--- 190 (258)
T ss_dssp HHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTS---
T ss_pred HHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHC---
Confidence 99999988754 444443 356899999942 3 66665432 223456789999999999999 88
Q ss_pred CeEecCCCCCCeeeCCCCcEEEecccCCccc
Q 041689 545 PVIHCDLKPSNVLLDDTMVAHLSDFGITKLL 575 (652)
Q Consensus 545 ~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 575 (652)
||+||||||+|||+++ .++|+|||+|...
T Consensus 191 givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 191 ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999999998 8999999999754
No 371
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.80 E-value=1.3e-20 Score=213.85 Aligned_cols=177 Identities=21% Similarity=0.174 Sum_probs=69.9
Q ss_pred CCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccc---------cCCccccCCCCCCEEEecCccccccCCccc
Q 041689 94 KSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSG---------GIPEEIGNLTNLTAIYLGGNKLNGSIPFTL 164 (652)
Q Consensus 94 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~---------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 164 (652)
+.++.|+|++|.+...... .|+.++|+.|.|.+ ..++.|..+++|+.|+|++|.|. .+|..+
T Consensus 173 ~~~~~l~L~~n~~~~~~~~--------~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~ 243 (727)
T 4b8c_D 173 PLTPKIELFANGKDEANQA--------LLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANI 243 (727)
T ss_dssp ---------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGG
T ss_pred CccceEEeeCCCCCcchhh--------HhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhh
Confidence 5577888888888764322 15555555555543 23444555555555555555554 333333
Q ss_pred cCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEe
Q 041689 165 RELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGID 244 (652)
Q Consensus 165 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ 244 (652)
.++++|++|+|++|.|+ .+|..|..+++|++|+|++|+|+ .+|..++++++|+.|+
T Consensus 244 ~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-----------------------~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 244 FKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-----------------------SLPAELGSCFQLKYFY 299 (727)
T ss_dssp GGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-----------------------SCCSSGGGGTTCSEEE
T ss_pred cCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-----------------------ccChhhcCCCCCCEEE
Confidence 34555555555555555 44444555555555555555554 3444455555555555
Q ss_pred cccccCCccCcccccCCCCCcEEEccCCcCCCccccccccccc-CcceeccccccCCCCch
Q 041689 245 FSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLIS-LKSLNFSNNNLSGAIPL 304 (652)
Q Consensus 245 ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~ 304 (652)
|++|.|+. +|..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|.
T Consensus 300 L~~N~l~~-lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 300 FFDNMVTT-LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp CCSSCCCC-CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred CCCCCCCc-cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 55555552 3444555556666666666665555555544321 22355566666555543
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.80 E-value=4.3e-19 Score=168.49 Aligned_cols=155 Identities=17% Similarity=0.274 Sum_probs=95.4
Q ss_pred hhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccccCCCCC
Q 041689 115 IGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKL 194 (652)
Q Consensus 115 ~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 194 (652)
...+++ |++|++++|+|+. +| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..+..+..+++|
T Consensus 40 ~~~l~~-L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 40 EAQMNS-LTYITLANINVTD-LT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp HHHHHT-CCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred hhhcCC-ccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 344554 7777777777773 33 56777777777777776652 2356777777777777777776666667777777
Q ss_pred cEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCccCcccccCCCCCcEEEccCCcC
Q 041689 195 YKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNIL 274 (652)
Q Consensus 195 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 274 (652)
++|+|++|++++..+..|..+++|++|++++|. .++. +| .+..+++|++|++++|++
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~---------------------~i~~-~~-~l~~l~~L~~L~l~~n~i 171 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNG---------------------AITD-IM-PLKTLPELKSLNIQFDGV 171 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCT---------------------BCCC-CG-GGGGCSSCCEEECTTBCC
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCC---------------------Cccc-cH-hhcCCCCCCEEECCCCCC
Confidence 777777777776566666666666666665553 0332 22 355556666666666666
Q ss_pred CCcccccccccccCcceeccccccC
Q 041689 275 KGSIPDSVGDLISLKSLNFSNNNLS 299 (652)
Q Consensus 275 ~~~~p~~~~~l~~L~~L~L~~N~l~ 299 (652)
++ ++ .+..+++|+.|++++|++.
T Consensus 172 ~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 172 HD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CC-CT-TGGGCSSCCEEEECBC---
T ss_pred cC-hH-HhccCCCCCEEEeeCcccC
Confidence 53 22 4556666666666666654
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.80 E-value=2e-19 Score=170.82 Aligned_cols=151 Identities=18% Similarity=0.234 Sum_probs=74.0
Q ss_pred CCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCc
Q 041689 28 PHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLN 107 (652)
Q Consensus 28 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 107 (652)
+++|++|++++|+|+. +| .+..+++|++|++++|.++.. ..+..+++|++|++++|+++
T Consensus 43 l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~~~-------------------~~l~~l~~L~~L~l~~n~l~ 101 (197)
T 4ezg_A 43 MNSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHATNY-------------------NPISGLSNLERLRIMGKDVT 101 (197)
T ss_dssp HHTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCSCC-------------------GGGTTCTTCCEEEEECTTCB
T ss_pred cCCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCCcc-------------------hhhhcCCCCCEEEeECCccC
Confidence 4455555555555552 33 355555555555555544311 12444555555555555555
Q ss_pred ccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCcc-ccccCCccccCCCCCcEEecccCccccccCc
Q 041689 108 GILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNK-LNGSIPFTLRELQKLQYVGLKDNKLEGTIPY 186 (652)
Q Consensus 108 ~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 186 (652)
+..+. .+..+++ |++|++++|++++..+..+..+++|++|+|++|+ ++ .+| .+..+++|++|++++|++++ ++
T Consensus 102 ~~~~~-~l~~l~~-L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~- 175 (197)
T 4ezg_A 102 SDKIP-NLSGLTS-LTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR- 175 (197)
T ss_dssp GGGSC-CCTTCTT-CCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-
T ss_pred cccCh-hhcCCCC-CCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-
Confidence 43333 3444443 5555555555554445555555555555555554 33 222 34555555555555555552 22
Q ss_pred cccCCCCCcEEEccCCccc
Q 041689 187 DIFRLVKLYKLDLGGNKLS 205 (652)
Q Consensus 187 ~~~~l~~L~~L~L~~N~l~ 205 (652)
.+..+++|++|++++|+|.
T Consensus 176 ~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 176 GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp TGGGCSSCCEEEECBC---
T ss_pred HhccCCCCCEEEeeCcccC
Confidence 3444555555555555543
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=2.3e-19 Score=169.53 Aligned_cols=127 Identities=26% Similarity=0.273 Sum_probs=68.5
Q ss_pred cEEecccCccccccCccccCCCCCcEEEccCCcccccccc-cCCCCCCCCEEEccCCC--CCCCcccCCCCccceEeccc
Q 041689 171 QYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILT-CFSNLASLRTLSLSYND--GPLPLEIGNLKVLIGIDFSM 247 (652)
Q Consensus 171 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~--~~~~~~~~~l~~L~~L~ls~ 247 (652)
+.+++++|.|+ .+|..+.. +|++|+|++|+|+++.+. .|..+++|++|+|++|. ...|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56777777776 56655544 677777777777765553 35666666666555553 22233444444444444444
Q ss_pred ccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCC
Q 041689 248 NNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSG 300 (652)
Q Consensus 248 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 300 (652)
|+|+++.+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|.+++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 44444444444444444444444444444444444444444444444444443
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.78 E-value=1.8e-19 Score=185.76 Aligned_cols=281 Identities=15% Similarity=0.128 Sum_probs=150.3
Q ss_pred CCCCCEEECCCCcCcccCCccccC-CCCCCEEEcCCCcCe--eccCCCccc-cccCCCCCcccccccCC--------CCC
Q 041689 28 PHNLEELLLGQNNLVGVVPAAIFD-VSTLKDLALQDNYLS--GSLSSIADN-YLTSSTPELSFLSSLSN--------CKS 95 (652)
Q Consensus 28 ~~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~--~~~~~~~~~-~l~~~~~~~~~~~~l~~--------l~~ 95 (652)
+.++++|.++++ +....-..+.. +++|+.|||++|+|+ ......... .+...........+|.+ +++
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~ 102 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQT 102 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTT
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCC
Confidence 467888888865 22222223333 788999999999887 332221110 00000000000122333 444
Q ss_pred CcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCcc----ccccCCccccCCCCCc
Q 041689 96 LVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNK----LNGSIPFTLRELQKLQ 171 (652)
Q Consensus 96 L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~----l~~~~~~~~~~l~~L~ 171 (652)
|+.|+|.+ .++.+.+. .|.++++ |+.|++++|.+..+.+.+|.++.++..+.+..+. ...+.+.+|.++.+|+
T Consensus 103 L~~l~L~~-~i~~I~~~-aF~~~~~-L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~ 179 (329)
T 3sb4_A 103 LEKVILSE-KIKNIEDA-AFKGCDN-LKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLE 179 (329)
T ss_dssp CCC-CBCT-TCCEECTT-TTTTCTT-CCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCE
T ss_pred CcEEECCc-cccchhHH-HhhcCcc-cceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccc
Confidence 44445544 44444333 3444443 4444444444444444444444444444443321 1122233333333333
Q ss_pred -EEecccCccccccCccc----cCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC-CCCCc-ccCCCCccceEe
Q 041689 172 -YVGLKDNKLEGTIPYDI----FRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND-GPLPL-EIGNLKVLIGID 244 (652)
Q Consensus 172 -~L~L~~N~l~~~~~~~~----~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~~~-~~~~l~~L~~L~ 244 (652)
.+.+.... .++..+ ....++..+.+.++-...........+++|+.|+|++|. ..+|. .|.++++|+.|+
T Consensus 180 ~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~ 256 (329)
T 3sb4_A 180 TTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIK 256 (329)
T ss_dssp EEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEE
T ss_pred eeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEE
Confidence 22222111 111111 012233444444332211111111235677777777764 34443 377777777788
Q ss_pred cccccCCccCcccccCCCCCc-EEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEe
Q 041689 245 FSMNNFSSVIPTTIGSLKDLQ-YLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNL 317 (652)
Q Consensus 245 ls~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 317 (652)
+++| ++.+.+.+|.++.+|+ .+++.+ .++.+.+.+|.++++|+.|++++|+++.+.+.+|.++++|+.++.
T Consensus 257 l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 257 LPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred CCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 8777 7777788888888898 888888 677677788899999999999888888777888888888888864
No 376
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.77 E-value=1.6e-17 Score=174.96 Aligned_cols=263 Identities=10% Similarity=0.111 Sum_probs=137.6
Q ss_pred CCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCcc
Q 041689 29 HNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNG 108 (652)
Q Consensus 29 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 108 (652)
.+++.+.+.+ +++.+...+|.+. +|+.++|..| ++.+... +|.++ +|+.+.|.+ .++.
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~-----------------aF~~~-~L~~i~lp~-~l~~ 170 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDM-----------------AFFNS-TVQEIVFPS-TLEQ 170 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTT-----------------TTTTC-CCCEEECCT-TCCE
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHH-----------------hcCCC-CceEEEeCC-CccE
Confidence 3455555533 3444555555553 5666665554 4433321 34442 455555553 4554
Q ss_pred cCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccc
Q 041689 109 ILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDI 188 (652)
Q Consensus 109 ~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 188 (652)
+... .|.++++ |+.++|++|+++.+...+|. +.+|+.+.|..| ++.+...+|.++++|+.+++.+| ++.....+|
T Consensus 171 I~~~-aF~~c~~-L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF 245 (401)
T 4fdw_A 171 LKED-IFYYCYN-LKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAF 245 (401)
T ss_dssp ECSS-TTTTCTT-CCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTT
T ss_pred ehHH-HhhCccc-CCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccc
Confidence 4444 4555544 66666666666555555554 355666666533 55455555666666666666543 343444444
Q ss_pred cCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCC------C-CcccCCCCccceEecccccCCccCcccccCC
Q 041689 189 FRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGP------L-PLEIGNLKVLIGIDFSMNNFSSVIPTTIGSL 261 (652)
Q Consensus 189 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~------~-~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 261 (652)
.+ .+|+.+.+ .|.++.+...+|.++++|+.+++.+|... + ...|.++++|+.+++. |.++.+...+|.++
T Consensus 246 ~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c 322 (401)
T 4fdw_A 246 RE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGN 322 (401)
T ss_dssp TT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTC
T ss_pred cc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCC
Confidence 44 55666666 33445455556666666666666555321 2 2235555555555555 33555555556666
Q ss_pred CCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCC-CCceEEeecCcCc
Q 041689 262 KDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLS-YLEHLNLSFNKLE 323 (652)
Q Consensus 262 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 323 (652)
.+|+.++|..| ++.+.+.+|.++ +|+.+++++|.+....+..|.+++ .++.|++..|.+.
T Consensus 323 ~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 323 RKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred CCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 66666666443 444445556655 566666666655555555555553 4555555555443
No 377
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=1.7e-19 Score=204.77 Aligned_cols=163 Identities=24% Similarity=0.249 Sum_probs=49.9
Q ss_pred CCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCc
Q 041689 28 PHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLN 107 (652)
Q Consensus 28 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 107 (652)
.+.++.|+|++|.+.. .+.. .|+.++|++|.|++.... .+.+. .....|..+++|+.|+|++|.+.
T Consensus 172 ~~~~~~l~L~~n~~~~-~~~~-----~l~~l~Ls~~~i~~~~~~--~n~~~------~~~~~~~~l~~L~~L~Ls~n~l~ 237 (727)
T 4b8c_D 172 TPLTPKIELFANGKDE-ANQA-----LLQHKKLSQYSIDEDDDI--ENRMV------MPKDSKYDDQLWHALDLSNLQIF 237 (727)
T ss_dssp ----------------------------------------------------------------CCCCCCEEECTTSCCS
T ss_pred CCccceEEeeCCCCCc-chhh-----HhhcCccCcccccCcccc--cccee------cChhhhccCCCCcEEECCCCCCC
Confidence 3567788888888775 2322 355566666665532110 00000 00123444444555555555544
Q ss_pred ccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCcc
Q 041689 108 GILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYD 187 (652)
Q Consensus 108 ~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 187 (652)
.+++. +..++. |++|+|++|+|+ .+|..|.+|++|++|+|++|+|+ .+|..|.+|++|++|+|++|.|+ .+|..
T Consensus 238 ~l~~~--~~~l~~-L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~ 311 (727)
T 4b8c_D 238 NISAN--IFKYDF-LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWE 311 (727)
T ss_dssp CCCGG--GGGCCS-CSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSS
T ss_pred CCChh--hcCCCC-CCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChh
Confidence 33222 223333 444444444444 33444444444444444444444 33444444444444444444444 33434
Q ss_pred ccCCCCCcEEEccCCcccccccc
Q 041689 188 IFRLVKLYKLDLGGNKLSGSILT 210 (652)
Q Consensus 188 ~~~l~~L~~L~L~~N~l~~~~~~ 210 (652)
|..+++|+.|+|++|.|++.+|.
T Consensus 312 ~~~l~~L~~L~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 312 FGNLCNLQFLGVEGNPLEKQFLK 334 (727)
T ss_dssp TTSCTTCCCEECTTSCCCSHHHH
T ss_pred hhcCCCccEEeCCCCccCCCChH
Confidence 44444444444444444443333
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=2.2e-18 Score=162.84 Aligned_cols=128 Identities=26% Similarity=0.263 Sum_probs=82.9
Q ss_pred CEEEecCccccccCCccccCCCCCcEEecccCccccccCc-cccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccC
Q 041689 147 TAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPY-DIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSY 225 (652)
Q Consensus 147 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 225 (652)
+.+++++|.|+ .+|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|+++.|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56677777775 34443332 667777777777655443 366677777777777777766666777777777777777
Q ss_pred CC--CCCCcccCCCCccceEecccccCCccCcccccCCCCCcEEEccCCcCCCc
Q 041689 226 ND--GPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGS 277 (652)
Q Consensus 226 N~--~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 277 (652)
|. ...+..|.++++|+.|+|++|++++..|..|..+++|++|+|++|++.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 75 22333466677777777777777766666677777777777777766643
No 379
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.75 E-value=3.9e-18 Score=175.67 Aligned_cols=265 Identities=12% Similarity=0.094 Sum_probs=185.9
Q ss_pred eeceeEeccCCCc-CCccCCCCCCCCCCCEEECCCCcCc--------------------ccCCccccC--------CCCC
Q 041689 5 SIGKLELNVDDIE-SPCEIPSEINPHNLEELLLGQNNLV--------------------GVVPAAIFD--------VSTL 55 (652)
Q Consensus 5 ~l~~l~l~~~~~~-~~~~ip~~~~~~~L~~L~Ls~N~l~--------------------~~~p~~~~~--------l~~L 55 (652)
+|+.|.++++-.. ....++. .+++|++|||++|+|. .+.+.+|.+ +++|
T Consensus 26 ~l~~L~l~g~i~~~~~~~l~~--~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L 103 (329)
T 3sb4_A 26 SITHLTLTGKLNAEDFRHLRD--EFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTL 103 (329)
T ss_dssp HCSEEEEEEEECHHHHHHHHH--SCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTC
T ss_pred ceeEEEEeccccHHHHHHHHH--hhccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCC
Confidence 4566777654321 1111111 1677888888888887 456678888 9999
Q ss_pred CEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCc----
Q 041689 56 KDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCN---- 131 (652)
Q Consensus 56 ~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~---- 131 (652)
+.|+|++ .++.+.+ .+|.++++|+.|+|++|.+..+.+. .|..... +..+.+..+.
T Consensus 104 ~~l~L~~-~i~~I~~-----------------~aF~~~~~L~~l~l~~n~i~~i~~~-aF~~~~~-l~~l~~~~~~~~~~ 163 (329)
T 3sb4_A 104 EKVILSE-KIKNIED-----------------AAFKGCDNLKICQIRKKTAPNLLPE-ALADSVT-AIFIPLGSSDAYRF 163 (329)
T ss_dssp CC-CBCT-TCCEECT-----------------TTTTTCTTCCEEEBCCSSCCEECTT-SSCTTTC-EEEECTTCTHHHHT
T ss_pred cEEECCc-cccchhH-----------------HHhhcCcccceEEcCCCCccccchh-hhcCCCc-eEEecCcchhhhhc
Confidence 9999999 8876655 3689999999999999999988887 6766554 7777766632
Q ss_pred ccccCCccccCCCCCC-EEEecCccc-cccCCccccCCCCCcEEecccCccccccCcccc-CCCCCcEEEccCCcccccc
Q 041689 132 VSGGIPEEIGNLTNLT-AIYLGGNKL-NGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIF-RLVKLYKLDLGGNKLSGSI 208 (652)
Q Consensus 132 l~~~~~~~~~~l~~L~-~L~L~~N~l-~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~ 208 (652)
...+...+|.++.+|+ .+.+....- .......-....++..+.+.++-.. .....+. .+++|+.|+|++|+++.+.
T Consensus 164 ~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~ 242 (329)
T 3sb4_A 164 KNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIP 242 (329)
T ss_dssp STTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEEC
T ss_pred cccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceec
Confidence 3344566788888888 565554321 1011111123556677777665332 2222222 3678888888888888888
Q ss_pred cccCCCCCCCCEEEccCCCCCC-CcccCCCCccc-eEecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccc
Q 041689 209 LTCFSNLASLRTLSLSYNDGPL-PLEIGNLKVLI-GIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLI 286 (652)
Q Consensus 209 ~~~~~~l~~L~~L~Ls~N~~~~-~~~~~~l~~L~-~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 286 (652)
+.+|.++++|++|+|++|-..+ +..|.++++|+ .+++.+ .++.+.+.+|.++++|+.+++++|.++.+.+.+|.+++
T Consensus 243 ~~aF~~~~~L~~l~l~~ni~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~ 321 (329)
T 3sb4_A 243 DFTFAQKKYLLKIKLPHNLKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGV 321 (329)
T ss_dssp TTTTTTCTTCCEEECCTTCCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTC
T ss_pred HhhhhCCCCCCEEECCcccceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCc
Confidence 8888888888888888874333 34588888888 888887 77778888999999999999999999877788899999
Q ss_pred cCcceec
Q 041689 287 SLKSLNF 293 (652)
Q Consensus 287 ~L~~L~L 293 (652)
+|+.++.
T Consensus 322 ~L~~ly~ 328 (329)
T 3sb4_A 322 PSKLIYK 328 (329)
T ss_dssp CCCEEEC
T ss_pred chhhhcc
Confidence 9988763
No 380
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.75 E-value=8.7e-17 Score=169.32 Aligned_cols=242 Identities=11% Similarity=0.118 Sum_probs=207.7
Q ss_pred CCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCcc
Q 041689 29 HNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNG 108 (652)
Q Consensus 29 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 108 (652)
.+|+.++|..| ++.+...+|.+. +|+.+.|.. .++.+.. .+|.++++|+.++|++|+++.
T Consensus 135 ~~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~-----------------~aF~~c~~L~~l~l~~n~l~~ 194 (401)
T 4fdw_A 135 SQIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKE-----------------DIFYYCYNLKKADLSKTKITK 194 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECS-----------------STTTTCTTCCEEECTTSCCSE
T ss_pred CCccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehH-----------------HHhhCcccCCeeecCCCcceE
Confidence 48999999876 888888999994 799999986 6665544 368999999999999999999
Q ss_pred cCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccc
Q 041689 109 ILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDI 188 (652)
Q Consensus 109 ~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 188 (652)
+... .|.. . +|+.+.|.. .++.+...+|.++++|+.++|..| ++.+...+|.+ .+|+.+.+ .|.++...+.+|
T Consensus 195 I~~~-aF~~-~-~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF 267 (401)
T 4fdw_A 195 LPAS-TFVY-A-GIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAF 267 (401)
T ss_dssp ECTT-TTTT-C-CCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTT
T ss_pred echh-hEee-c-ccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHh
Confidence 8877 5653 4 499999985 488889999999999999999986 67688889988 89999999 566776778899
Q ss_pred cCCCCCcEEEccCCccc-----ccccccCCCCCCCCEEEccCCCCCC-CcccCCCCccceEecccccCCccCcccccCCC
Q 041689 189 FRLVKLYKLDLGGNKLS-----GSILTCFSNLASLRTLSLSYNDGPL-PLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLK 262 (652)
Q Consensus 189 ~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~~~~-~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~ 262 (652)
.++.+|+.+++.+|.+. .+.+.+|.++++|+.++|.++-..+ ...|.++++|+.+++..| ++.+.+.+|.++
T Consensus 268 ~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~- 345 (401)
T 4fdw_A 268 YYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT- 345 (401)
T ss_dssp TTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCTTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-
T ss_pred hCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCCceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-
Confidence 99999999999998876 5788999999999999999664333 456899999999999655 887888999999
Q ss_pred CCcEEEccCCcCCCcccccccccc-cCcceeccccccC
Q 041689 263 DLQYLFLGYNILKGSIPDSVGDLI-SLKSLNFSNNNLS 299 (652)
Q Consensus 263 ~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~ 299 (652)
+|+.+++++|.+....+..|.+++ +++.|++..|.+.
T Consensus 346 ~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 346 GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 999999999999877888899885 7899999988765
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=2.1e-18 Score=162.91 Aligned_cols=111 Identities=30% Similarity=0.359 Sum_probs=90.5
Q ss_pred CCCEEEccCCC-CCCCcccCCCCccceEecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccc
Q 041689 217 SLRTLSLSYND-GPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSN 295 (652)
Q Consensus 217 ~L~~L~Ls~N~-~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 295 (652)
+|++|+|++|. ..+|..+.++++|+.|+|++|+|+++.+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++
T Consensus 32 ~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 111 (193)
T 2wfh_A 32 DVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHG 111 (193)
T ss_dssp TCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCS
T ss_pred CCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCC
Confidence 44555555554 34455566677777777788888888888899999999999999999988888899999999999999
Q ss_pred cccCCCCchhhcCCCCCceEEeecCcCcccCC
Q 041689 296 NNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIP 327 (652)
Q Consensus 296 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 327 (652)
|+|++..+..|..+++|+.|+|++|++.|...
T Consensus 112 N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 112 NDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 99997777789999999999999999987654
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.74 E-value=7e-18 Score=155.70 Aligned_cols=137 Identities=21% Similarity=0.206 Sum_probs=107.2
Q ss_pred CCCCCEEECCCCcCc-ccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCC
Q 041689 28 PHNLEELLLGQNNLV-GVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPL 106 (652)
Q Consensus 28 ~~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 106 (652)
+++|++|+|++|+++ +.+|..|..+++|++|+|++|.|++. ..+..+++|++|+|++|++
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-------------------~~~~~l~~L~~L~Ls~N~l 83 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-------------------SNLPKLPKLKKLELSENRI 83 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-------------------SSCCCCSSCCEEEEESCCC
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-------------------hhhccCCCCCEEECcCCcC
Confidence 678999999999998 56788888999999999999988754 1467788889999999988
Q ss_pred cccCCccchhcccccCcEEEccCCcccccCC-ccccCCCCCCEEEecCccccccCC---ccccCCCCCcEEecccCcccc
Q 041689 107 NGILPRMSIGNLSHSLEIFDMSKCNVSGGIP-EEIGNLTNLTAIYLGGNKLNGSIP---FTLRELQKLQYVGLKDNKLEG 182 (652)
Q Consensus 107 ~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~ 182 (652)
++..|. .+..+++ |++|+|++|+|++... ..+..+++|+.|+|++|++++..+ ..|..+++|++|++++|.+.
T Consensus 84 ~~~~~~-~~~~l~~-L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~- 160 (168)
T 2ell_A 84 FGGLDM-LAEKLPN-LTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ- 160 (168)
T ss_dssp CSCCCH-HHHHCTT-CCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-
T ss_pred chHHHH-HHhhCCC-CCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-
Confidence 886555 5556765 8888888888886532 678888888888888888886555 46778888888888888877
Q ss_pred ccCc
Q 041689 183 TIPY 186 (652)
Q Consensus 183 ~~~~ 186 (652)
.+|+
T Consensus 161 ~~~~ 164 (168)
T 2ell_A 161 EAPD 164 (168)
T ss_dssp BCCS
T ss_pred hccc
Confidence 4443
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=5.6e-17 Score=153.10 Aligned_cols=126 Identities=23% Similarity=0.260 Sum_probs=111.7
Q ss_pred CcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEec
Q 041689 96 LVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGL 175 (652)
Q Consensus 96 L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 175 (652)
-+.+++++|.++.++.. ++.+|++|+|++|+|+ .+|..|.++++|+.|+|++|+|+++.+..|.++++|++|+|
T Consensus 12 ~~~l~~~~~~l~~ip~~-----~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~L 85 (193)
T 2wfh_A 12 DTVVRCSNKGLKVLPKG-----IPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLIL 85 (193)
T ss_dssp TTEEECTTSCCSSCCSC-----CCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEEEcCCCCCCcCCCC-----CCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEEC
Confidence 36899999999977654 2346999999999998 56789999999999999999999888889999999999999
Q ss_pred ccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC
Q 041689 176 KDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND 227 (652)
Q Consensus 176 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 227 (652)
++|+|++..|..|..+++|++|+|++|+|+.+.+..|..+++|+.|+|++|.
T Consensus 86 s~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 137 (193)
T 2wfh_A 86 SYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANP 137 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCC
Confidence 9999998888889999999999999999998888888888999988888884
No 384
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.71 E-value=5.6e-18 Score=174.23 Aligned_cols=144 Identities=15% Similarity=0.129 Sum_probs=104.1
Q ss_pred HHHHHHhcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccc--------------hhhh--------hHHHHHHHH
Q 041689 418 LEVCRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCG--------------RAFK--------SFDIECEIM 475 (652)
Q Consensus 418 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~--------~~~~E~~~l 475 (652)
..+.....=|++.+.||+|++|.||+|...+|+.||||+++.... .... ...+|...+
T Consensus 88 ~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL 167 (397)
T 4gyi_A 88 HTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFM 167 (397)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHH
Confidence 334444445899999999999999999998999999999753210 0001 123466666
Q ss_pred HhcCCCee--eeEEeeeecCCceEEEEEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCC
Q 041689 476 KSIHYRNL--VKIISSCSNEEFKELVLEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKP 553 (652)
Q Consensus 476 ~~l~h~ni--v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp 553 (652)
.++.+.++ ...+++ ...++||||++|+++.++... .....++.|++.+|.|||++ |||||||||
T Consensus 168 ~rL~~~gv~vp~p~~~----~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp 233 (397)
T 4gyi_A 168 KALYEEGFPVPEPIAQ----SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLAKH---GLIHGDFNE 233 (397)
T ss_dssp HHHHHTTCSCCCEEEE----ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHHHT---TEECSCCST
T ss_pred HHHHhcCCCCCeeeec----cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCH
Confidence 66644433 222222 124799999999888765332 12456889999999999999 999999999
Q ss_pred CCeeeCCCC----------cEEEecccCCccc
Q 041689 554 SNVLLDDTM----------VAHLSDFGITKLL 575 (652)
Q Consensus 554 ~NIll~~~~----------~~kl~Dfg~~~~~ 575 (652)
.|||+++++ .+.|+||+-+...
T Consensus 234 ~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 234 FNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp TSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 999998776 4899999987643
No 385
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.71 E-value=3.6e-17 Score=150.92 Aligned_cols=131 Identities=20% Similarity=0.233 Sum_probs=86.4
Q ss_pred CCCCcEEEcccCCCc-ccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCc
Q 041689 93 CKSLVVFLLSNNPLN-GILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQ 171 (652)
Q Consensus 93 l~~L~~L~Ls~N~l~-~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 171 (652)
.++|+.|+|++|.++ +..|. .+..+++ |++|++++|+|++. ..|..+++|++|+|++|++++.+|..+..+++|+
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~-~~~~l~~-L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEG-LTAEFVN-LEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSS-CCGGGGG-CCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred cccCCEEECCCCCCChhhHHH-HHHhCCC-CCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 466777777777776 33343 3556665 77777777777754 6667777777777777777765666666677777
Q ss_pred EEecccCccccccC-ccccCCCCCcEEEccCCccccccc---ccCCCCCCCCEEEccCCC
Q 041689 172 YVGLKDNKLEGTIP-YDIFRLVKLYKLDLGGNKLSGSIL---TCFSNLASLRTLSLSYND 227 (652)
Q Consensus 172 ~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~ 227 (652)
+|+|++|+|++..+ ..+..+++|+.|++++|.+++..+ ..|..+++|++|++++|.
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~ 158 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRE 158 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETT
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCC
Confidence 77777777764322 566667777777777777765544 356666666666666654
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.70 E-value=2.7e-17 Score=148.44 Aligned_cols=129 Identities=20% Similarity=0.223 Sum_probs=98.8
Q ss_pred CCCCCEEECCCCcCc-ccCCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCC
Q 041689 28 PHNLEELLLGQNNLV-GVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPL 106 (652)
Q Consensus 28 ~~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 106 (652)
+++|++|++++|+++ +.+|..|..+++|++|+|++|+|++. ..+.++++|++|+|++|++
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-------------------~~~~~l~~L~~L~Ls~n~i 76 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-------------------ANLPKLNKLKKLELSDNRV 76 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-------------------TTCCCCTTCCEEECCSSCC
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-------------------hhhhcCCCCCEEECCCCcc
Confidence 578999999999998 67888888999999999999988744 2467788888888888888
Q ss_pred cccCCccchhcccccCcEEEccCCccccc-CCccccCCCCCCEEEecCccccccCC---ccccCCCCCcEEeccc
Q 041689 107 NGILPRMSIGNLSHSLEIFDMSKCNVSGG-IPEEIGNLTNLTAIYLGGNKLNGSIP---FTLRELQKLQYVGLKD 177 (652)
Q Consensus 107 ~~~~~~~~~~~l~~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~ 177 (652)
++..|. .+..+++ |++|++++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|++|++++
T Consensus 77 ~~~~~~-~~~~l~~-L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 77 SGGLEV-LAEKCPN-LTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CSCTHH-HHHHCTT-CCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred cchHHH-HhhhCCC-CCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 875554 5555665 88888888888764 24677778888888888888776555 4677777777777653
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.70 E-value=1.1e-16 Score=149.11 Aligned_cols=93 Identities=19% Similarity=0.222 Sum_probs=51.0
Q ss_pred cCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCC
Q 041689 90 LSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQK 169 (652)
Q Consensus 90 l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 169 (652)
|.++++|++|+|++|+|+++++. .+..+++ |++|+|++|+|++..+..|..+++|++|+|++|+|+++.+..|..+++
T Consensus 48 ~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~-L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 125 (177)
T 2o6r_A 48 FDKLTQLTKLSLSQNQIQSLPDG-VFDKLTK-LTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTS 125 (177)
T ss_dssp TTTCTTCSEEECCSSCCCCCCTT-TTTTCTT-CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred hcCcccccEEECCCCcceEeChh-HccCCCc-cCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcc
Confidence 34445555555555555544443 3444443 555555555555555555555666666666666666555555555666
Q ss_pred CcEEecccCcccccc
Q 041689 170 LQYVGLKDNKLEGTI 184 (652)
Q Consensus 170 L~~L~L~~N~l~~~~ 184 (652)
|++|+|++|.+.+..
T Consensus 126 L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 126 LQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCEEECCSSCBCCCH
T ss_pred cCEEEecCCCeeccC
Confidence 666666666665433
No 388
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=2.7e-16 Score=146.33 Aligned_cols=128 Identities=22% Similarity=0.200 Sum_probs=104.4
Q ss_pred CCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEe
Q 041689 95 SLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVG 174 (652)
Q Consensus 95 ~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 174 (652)
+.+.+++++|+++.++.. ++.+|++|++++|+++++.+..|..+++|++|+|++|+|+++.+..|..+++|++|+
T Consensus 8 ~~~~l~~~~~~l~~~p~~-----~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (177)
T 2o6r_A 8 SGTEIRCNSKGLTSVPTG-----IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILY 82 (177)
T ss_dssp ETTEEECCSSCCSSCCTT-----CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEEecCCCCccCCCC-----CCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEE
Confidence 357888999998877543 223589999999999887777888899999999999999877777788889999999
Q ss_pred cccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCC
Q 041689 175 LKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYND 227 (652)
Q Consensus 175 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 227 (652)
|++|+|++..+..|..+++|++|+|++|+++++++..|..+++|++|+|++|.
T Consensus 83 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 135 (177)
T 2o6r_A 83 LHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 135 (177)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCC
Confidence 99999987777777888889999999998887777777777777777777774
No 389
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=4.2e-17 Score=147.17 Aligned_cols=129 Identities=19% Similarity=0.235 Sum_probs=95.0
Q ss_pred CCCCCcEEEcccCCCc-ccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCC
Q 041689 92 NCKSLVVFLLSNNPLN-GILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKL 170 (652)
Q Consensus 92 ~l~~L~~L~Ls~N~l~-~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 170 (652)
..++|+.|++++|.++ +..|. .+..+++ |++|++++|+|++. ..+..+++|++|+|++|++++.+|..+..+++|
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~-~~~~l~~-L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L 90 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEG-LTDEFEE-LEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNL 90 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCS-CCTTCTT-CCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTC
T ss_pred CCccCeEEEccCCcCChhHHHH-HHhhcCC-CcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCC
Confidence 3467888888888887 44444 5566665 88888888888765 667778888888888888876677777778888
Q ss_pred cEEecccCccccc-cCccccCCCCCcEEEccCCccccccc---ccCCCCCCCCEEEcc
Q 041689 171 QYVGLKDNKLEGT-IPYDIFRLVKLYKLDLGGNKLSGSIL---TCFSNLASLRTLSLS 224 (652)
Q Consensus 171 ~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls 224 (652)
++|++++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|++|+++
T Consensus 91 ~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 91 THLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 8888888888753 23677778888888888888876655 467777777777765
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.68 E-value=1.1e-16 Score=148.79 Aligned_cols=136 Identities=14% Similarity=0.173 Sum_probs=97.9
Q ss_pred CCCCCCCCCCCEEECCCCcCcccCCccccCCC-CCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEE
Q 041689 22 IPSEINPHNLEELLLGQNNLVGVVPAAIFDVS-TLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFL 100 (652)
Q Consensus 22 ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~ 100 (652)
.|.+.++.+|++|+|++|+++.+ |. +..+. +|++|+|++|+|++. + .|.++++|++|+
T Consensus 12 ~~~~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~-~------------------~l~~l~~L~~L~ 70 (176)
T 1a9n_A 12 AAQYTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL-D------------------GFPLLRRLKTLL 70 (176)
T ss_dssp SCEEECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE-C------------------CCCCCSSCCEEE
T ss_pred HHhcCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc-c------------------ccccCCCCCEEE
Confidence 45555788889999999988854 54 44444 888888888888754 2 367788888888
Q ss_pred cccCCCcccCCccchhcccccCcEEEccCCcccccCCc--cccCCCCCCEEEecCccccccCCc---cccCCCCCcEEec
Q 041689 101 LSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPE--EIGNLTNLTAIYLGGNKLNGSIPF---TLRELQKLQYVGL 175 (652)
Q Consensus 101 Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~L 175 (652)
|++|+|+++++. .+..+++ |++|+|++|+|+. +|. .+..+++|+.|+|++|.++...+. .+..+++|++|++
T Consensus 71 Ls~N~l~~~~~~-~~~~l~~-L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 71 VNNNRICRIGEG-LDQALPD-LTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp CCSSCCCEECSC-HHHHCTT-CCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETT
T ss_pred CCCCcccccCcc-hhhcCCC-CCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCC
Confidence 888888877654 4566765 8888888888864 343 677777888888888877743322 3677777777777
Q ss_pred ccCccc
Q 041689 176 KDNKLE 181 (652)
Q Consensus 176 ~~N~l~ 181 (652)
++|.+.
T Consensus 148 ~~n~~~ 153 (176)
T 1a9n_A 148 QKVKLK 153 (176)
T ss_dssp EECCHH
T ss_pred CcCCHH
Confidence 777765
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.66 E-value=1.4e-16 Score=148.06 Aligned_cols=133 Identities=15% Similarity=0.117 Sum_probs=109.8
Q ss_pred ccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCC
Q 041689 89 SLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQ 168 (652)
Q Consensus 89 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 168 (652)
.+.++.+|+.|+|++|+++.+ + .+..+.++|++|+|++|+|++. ..|..+++|++|+|++|+|++..+..|..++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~--~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-E--NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-C--CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred hcCCcCCceEEEeeCCCCchh-H--HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 467889999999999999976 3 2455553599999999999976 6789999999999999999977767779999
Q ss_pred CCcEEecccCccccccCc--cccCCCCCcEEEccCCcccccccc---cCCCCCCCCEEEccCCC
Q 041689 169 KLQYVGLKDNKLEGTIPY--DIFRLVKLYKLDLGGNKLSGSILT---CFSNLASLRTLSLSYND 227 (652)
Q Consensus 169 ~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~Ls~N~ 227 (652)
+|++|+|++|+|+ .+|. .+..+++|+.|++++|.++...+. .+..+++|+.|++++|.
T Consensus 89 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~ 151 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVK 151 (176)
T ss_dssp TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECC
T ss_pred CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCC
Confidence 9999999999997 5555 788899999999999999854332 47778888888888774
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.60 E-value=1.4e-17 Score=158.12 Aligned_cols=152 Identities=26% Similarity=0.274 Sum_probs=90.1
Q ss_pred CCCCCEEECCCCcCcccCCc------cccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEc
Q 041689 28 PHNLEELLLGQNNLVGVVPA------AIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLL 101 (652)
Q Consensus 28 ~~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L 101 (652)
..+++.++++.|.+++..|. .|..+++|++|+|++|+|++++ .+.++++|++|+|
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l~-------------------~~~~l~~L~~L~l 77 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS-------------------SLSGMENLRILSL 77 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCCC-------------------CHHHHTTCCEEEE
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcccc-------------------ccccCCCCCEEEC
Confidence 34556666666666665555 6677777777777777765421 2455666777777
Q ss_pred ccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCC-ccccCCCCCcEEecccCcc
Q 041689 102 SNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIP-FTLRELQKLQYVGLKDNKL 180 (652)
Q Consensus 102 s~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l 180 (652)
++|+++.++. .+..+++ |++|+|++|+|+++ | .+..+++|+.|+|++|++++..+ ..+..+++|++|++++|.+
T Consensus 78 ~~n~l~~l~~--~~~~~~~-L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l 152 (198)
T 1ds9_A 78 GRNLIKKIEN--LDAVADT-LEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp EEEEECSCSS--HHHHHHH-CSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHH
T ss_pred CCCCcccccc--hhhcCCc-CCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcc
Confidence 7777665432 3444444 77777777766653 3 46666666666666666664332 3566666666666666666
Q ss_pred ccccCcc----------ccCCCCCcEEEccCCccc
Q 041689 181 EGTIPYD----------IFRLVKLYKLDLGGNKLS 205 (652)
Q Consensus 181 ~~~~~~~----------~~~l~~L~~L~L~~N~l~ 205 (652)
++.+|.. +..+++|+.|| +|.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 153 YNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred ccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 6544432 45555555554 44443
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=1.5e-17 Score=158.02 Aligned_cols=81 Identities=20% Similarity=0.251 Sum_probs=36.0
Q ss_pred CcEEEccCCcccccCCc------cccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccccCCCCCc
Q 041689 122 LEIFDMSKCNVSGGIPE------EIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLY 195 (652)
Q Consensus 122 L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 195 (652)
++.++++.|.+++..|. .|..+++|++|+|++|++++ +| .+..+++|++|+|++|+|+ .+|..+..+++|+
T Consensus 20 l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 20 VVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96 (198)
T ss_dssp CCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCS
T ss_pred ccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCC
Confidence 44444444444444433 44444444444444444443 23 4444444444444444444 3333333334444
Q ss_pred EEEccCCccc
Q 041689 196 KLDLGGNKLS 205 (652)
Q Consensus 196 ~L~L~~N~l~ 205 (652)
+|+|++|+++
T Consensus 97 ~L~L~~N~l~ 106 (198)
T 1ds9_A 97 ELWISYNQIA 106 (198)
T ss_dssp EEEEEEEECC
T ss_pred EEECcCCcCC
Confidence 4444444443
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.57 E-value=8e-15 Score=135.23 Aligned_cols=91 Identities=20% Similarity=0.176 Sum_probs=78.3
Q ss_pred CccceEecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEe
Q 041689 238 KVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNL 317 (652)
Q Consensus 238 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 317 (652)
+.|+.|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 56777788888888888888889999999999999999777778889999999999999998777778889999999999
Q ss_pred ecCcCcccCCC
Q 041689 318 SFNKLEGEIPK 328 (652)
Q Consensus 318 ~~N~l~~~~p~ 328 (652)
++|+|+|.++.
T Consensus 110 ~~N~~~c~c~~ 120 (170)
T 3g39_A 110 LNNPWDCACSD 120 (170)
T ss_dssp CSSCBCTTBGG
T ss_pred CCCCCCCCchh
Confidence 99999887763
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.57 E-value=9.5e-15 Score=134.74 Aligned_cols=108 Identities=19% Similarity=0.160 Sum_probs=82.2
Q ss_pred CCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEe
Q 041689 95 SLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVG 174 (652)
Q Consensus 95 ~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 174 (652)
..+.|++++|.++.++.. ++.+|++|+|++|+|+++.|..|.++++|++|+|++|+|+++.+..|.++++|++|+
T Consensus 10 ~~~~l~~s~n~l~~ip~~-----~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~ 84 (170)
T 3g39_A 10 SGTTVDCSGKSLASVPTG-----IPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLS 84 (170)
T ss_dssp ETTEEECTTSCCSSCCSC-----CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEEeCCCCcCccCcc-----CCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEE
Confidence 356788888888876543 124588888888888877778888888888888888888877777778888888888
Q ss_pred cccCccccccCccccCCCCCcEEEccCCccccc
Q 041689 175 LKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGS 207 (652)
Q Consensus 175 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 207 (652)
|++|+|++..+..|..+++|++|+|++|.++..
T Consensus 85 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 85 LNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 888888866666677777888888888877643
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.55 E-value=1.8e-14 Score=133.41 Aligned_cols=107 Identities=20% Similarity=0.230 Sum_probs=81.7
Q ss_pred EEEccCCC-CCCCcccCCCCccceEecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceecccccc
Q 041689 220 TLSLSYND-GPLPLEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNL 298 (652)
Q Consensus 220 ~L~Ls~N~-~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 298 (652)
.+++++|. ..+|..+. ++|+.|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|
T Consensus 16 ~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l 93 (174)
T 2r9u_A 16 LVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL 93 (174)
T ss_dssp EEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCcc
Confidence 44444443 33444433 5677777788888887788888888888888888888876666778888888888888888
Q ss_pred CCCCchhhcCCCCCceEEeecCcCcccCCC
Q 041689 299 SGAIPLLLEKLSYLEHLNLSFNKLEGEIPK 328 (652)
Q Consensus 299 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 328 (652)
++..+..|..+++|+.|+|++|+|++.++.
T Consensus 94 ~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~ 123 (174)
T 2r9u_A 94 KSIPRGAFDNLKSLTHIYLYNNPWDCECRD 123 (174)
T ss_dssp CCCCTTTTTTCTTCSEEECCSSCBCTTBGG
T ss_pred ceeCHHHhccccCCCEEEeCCCCccccccc
Confidence 877666788888888899888888877653
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.54 E-value=2.4e-14 Score=132.49 Aligned_cols=106 Identities=19% Similarity=0.188 Sum_probs=76.2
Q ss_pred CcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEec
Q 041689 96 LVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGL 175 (652)
Q Consensus 96 L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 175 (652)
-+.+++++|+++.++.. ++.+|++|+|++|+|+++.|..|.++++|++|+|++|+|+++.+..|.++++|++|+|
T Consensus 14 ~~~l~~~~n~l~~iP~~-----~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L 88 (174)
T 2r9u_A 14 QTLVNCQNIRLASVPAG-----IPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDL 88 (174)
T ss_dssp SSEEECCSSCCSSCCSC-----CCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CcEEEeCCCCCCccCCC-----cCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEEC
Confidence 36778888888766543 1234788888888887777777777777888888777777666666777777777777
Q ss_pred ccCccccccCccccCCCCCcEEEccCCcccc
Q 041689 176 KDNKLEGTIPYDIFRLVKLYKLDLGGNKLSG 206 (652)
Q Consensus 176 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 206 (652)
++|+|++..+..|..+++|++|+|++|.+..
T Consensus 89 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 89 NDNHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CSSCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CCCccceeCHHHhccccCCCEEEeCCCCccc
Confidence 7777775555557777777777777777663
No 398
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.54 E-value=3.5e-13 Score=142.18 Aligned_cols=287 Identities=14% Similarity=0.054 Sum_probs=149.2
Q ss_pred cCCCCC--CCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCcccc--ccCC----CCCcccccccCC
Q 041689 21 EIPSEI--NPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNY--LTSS----TPELSFLSSLSN 92 (652)
Q Consensus 21 ~ip~~~--~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~--l~~~----~~~~~~~~~l~~ 92 (652)
+|...- ++.+|+++.|.. +++.+...+|.++++|+.++|..| ++.+....+.+- +... ........+|.+
T Consensus 61 sIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~ 138 (394)
T 4fs7_A 61 SIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKG 138 (394)
T ss_dssp EECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTT
T ss_pred EhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeec
Confidence 455433 677888888864 477777788888888888888755 444433322210 0000 000011122333
Q ss_pred CCCCcEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcE
Q 041689 93 CKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQY 172 (652)
Q Consensus 93 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 172 (652)
+..+........ ..+... .|.+... |+.+.+.++- ..+...+|.++.+|+.+++..| ++.+...+|.+++.|+.
T Consensus 139 ~~~~~~~~~~~~--~~i~~~-aF~~c~~-L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~ 212 (394)
T 4fs7_A 139 CDFKEITIPEGV--TVIGDE-AFATCES-LEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLEN 212 (394)
T ss_dssp CCCSEEECCTTC--CEECTT-TTTTCTT-CCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCB
T ss_pred ccccccccCccc--cccchh-hhcccCC-CcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccce
Confidence 332222222211 112222 3444433 5555554332 2244444555555555555444 33344444444444444
Q ss_pred EecccCcc---------------------ccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCC
Q 041689 173 VGLKDNKL---------------------EGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLP 231 (652)
Q Consensus 173 L~L~~N~l---------------------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~ 231 (652)
+.+..+.. +......|....+|+.+.+..+... +...+|..+..++.+....+. ...
T Consensus 213 i~~~~~~~~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~-i~~ 290 (394)
T 4fs7_A 213 MEFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVI-VPE 290 (394)
T ss_dssp CCCCTTCCEECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSE-ECT
T ss_pred eecCCCceEeehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCcee-ecc
Confidence 44443332 2233344555555555555554333 445555555555555554431 111
Q ss_pred cccCCCCccceEecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCC
Q 041689 232 LEIGNLKVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSY 311 (652)
Q Consensus 232 ~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 311 (652)
..|..+.+|+.+.+..+ ++.+...+|.++.+|+.++|..+ ++.+...+|.++.+|+.+++..| ++.+...+|.++.+
T Consensus 291 ~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~ 367 (394)
T 4fs7_A 291 KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCIN 367 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTT
T ss_pred ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCC
Confidence 23556667777777544 55556667777777777777644 55455667777777777777665 55556667777777
Q ss_pred CceEEeecC
Q 041689 312 LEHLNLSFN 320 (652)
Q Consensus 312 L~~L~L~~N 320 (652)
|+.+++..+
T Consensus 368 L~~i~lp~~ 376 (394)
T 4fs7_A 368 LKKVELPKR 376 (394)
T ss_dssp CCEEEEEGG
T ss_pred CCEEEECCC
Confidence 777777543
No 399
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.49 E-value=8.1e-13 Score=139.39 Aligned_cols=268 Identities=14% Similarity=0.064 Sum_probs=161.9
Q ss_pred cCcccCCccccCCCCCCEEEcCCCcCeeccCCCccc--cccCC----CCCcccccccCCCCCCcEEEcccCCCcccCCcc
Q 041689 40 NLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADN--YLTSS----TPELSFLSSLSNCKSLVVFLLSNNPLNGILPRM 113 (652)
Q Consensus 40 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--~l~~~----~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~ 113 (652)
+++.+-..+|.++++|+.+.|..+ ++.+....+.+ .|... ......-.+|.++.+|+.+.+..+ +..+...
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~- 134 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDSVKMIGRCTFSGCYALKSILLPLM-LKSIGVE- 134 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTTCCEECTTTTTTCTTCCCCCCCTT-CCEECTT-
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCCceEccchhhcccccchhhcccCc-eeeecce-
Confidence 577788899999999999999854 77665543321 11100 001111234555566665555433 3334333
Q ss_pred chhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccccCCCC
Q 041689 114 SIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVK 193 (652)
Q Consensus 114 ~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 193 (652)
.|.+.. +...... +.+..+...+|.++++|+.+.+..+. ..+...+|.++++|+.+.+..| ++......|.....
T Consensus 135 aF~~~~--~~~~~~~-~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~ 209 (394)
T 4fs7_A 135 AFKGCD--FKEITIP-EGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECIL 209 (394)
T ss_dssp TTTTCC--CSEEECC-TTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTT
T ss_pred eeeccc--ccccccC-ccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccc
Confidence 444432 3333322 33444567889999999999998765 4478889999999999999887 55466677777777
Q ss_pred CcEEEccCCccc---------------------ccccccCCCCCCCCEEEccCCCCCC-CcccCCCCccceEecccccCC
Q 041689 194 LYKLDLGGNKLS---------------------GSILTCFSNLASLRTLSLSYNDGPL-PLEIGNLKVLIGIDFSMNNFS 251 (652)
Q Consensus 194 L~~L~L~~N~l~---------------------~~~~~~~~~l~~L~~L~Ls~N~~~~-~~~~~~l~~L~~L~ls~N~l~ 251 (652)
|+.+.+..+... .+...+|..+..|+.+.+..+...+ ...|..+..++.+....+.+
T Consensus 210 L~~i~~~~~~~~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i- 288 (394)
T 4fs7_A 210 LENMEFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV- 288 (394)
T ss_dssp CCBCCCCTTCCEECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE-
T ss_pred cceeecCCCceEeehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee-
Confidence 777777655432 1222334444455555554443221 22344555555555544432
Q ss_pred ccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecC
Q 041689 252 SVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFN 320 (652)
Q Consensus 252 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 320 (652)
....|.++.+|+.+.+..+ ++.+...+|.++.+|+.++|.++ ++.+...+|.++.+|+.+++..|
T Consensus 289 --~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 289 --PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp --CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred --ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 2345666677777777654 44455666777777777777544 55555667777777777777655
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.42 E-value=1.2e-11 Score=130.44 Aligned_cols=283 Identities=12% Similarity=0.106 Sum_probs=172.4
Q ss_pred CCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCc---CeeccCCCccc--cccCC----CCCcccccccCCCCCCcEE
Q 041689 29 HNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNY---LSGSLSSIADN--YLTSS----TPELSFLSSLSNCKSLVVF 99 (652)
Q Consensus 29 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~~~~~~~--~l~~~----~~~~~~~~~l~~l~~L~~L 99 (652)
..|+.+.+.. .++.+-..+|.++++|+.+.++.|. ++.+....+.. .+... ......-.+|.++.+|+.+
T Consensus 64 ~~L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~~~~I~~~aF~~c~~L~~i 142 (394)
T 4gt6_A 64 YVLTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDSVTEIDSEAFHHCEELDTV 142 (394)
T ss_dssp SCCCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTTCSEECTTTTTTCTTCCEE
T ss_pred CcCEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCccceehhhhhhhhcccccc
Confidence 3588888865 4787888899999999999998774 44443332211 00000 0000111234555555555
Q ss_pred EcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCc
Q 041689 100 LLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNK 179 (652)
Q Consensus 100 ~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 179 (652)
.+..+ +..+... .|..... |+.+.+..+ ++.+...+|.+ .+|+.+.+..+-.. +...+|.+..+|.......+.
T Consensus 143 ~lp~~-~~~I~~~-~F~~c~~-L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~ 216 (394)
T 4gt6_A 143 TIPEG-VTSVADG-MFSYCYS-LHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTITSDSES 216 (394)
T ss_dssp ECCTT-CCEECTT-TTTTCTT-CCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSS
T ss_pred cccce-eeeeccc-ceecccc-cccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccccceecccccc
Confidence 55432 2333332 3444433 555555433 33344444443 34555555544332 445555555555555554444
Q ss_pred cccccCccc--------------cCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCC-CcccCCCCccceEe
Q 041689 180 LEGTIPYDI--------------FRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPL-PLEIGNLKVLIGID 244 (652)
Q Consensus 180 l~~~~~~~~--------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~-~~~~~~l~~L~~L~ 244 (652)
.. .....+ .....+..+.+. +.++.+...+|.++.+|+.+.+..+...+ ...|.+++.|+.+.
T Consensus 217 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~ 294 (394)
T 4gt6_A 217 YP-AIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIE 294 (394)
T ss_dssp SC-BSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEE
T ss_pred cc-cccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccceecCccccccccccccc
Confidence 33 111111 111223333332 23444556788889999999988775333 34578889999999
Q ss_pred cccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCc
Q 041689 245 FSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLE 323 (652)
Q Consensus 245 ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 323 (652)
+. +.++.+...+|.++.+|+.+++..+ ++.+...+|.++.+|+.+.|..+ ++.+-..+|.++.+|+.+++.+|...
T Consensus 295 l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 295 FS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp CC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH
T ss_pred CC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee
Confidence 86 5677777788999999999999865 66567788999999999999655 76677788999999999999887654
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.41 E-value=2e-13 Score=141.39 Aligned_cols=95 Identities=23% Similarity=0.160 Sum_probs=64.0
Q ss_pred CCcccCCCCccceEeccc-ccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcC
Q 041689 230 LPLEIGNLKVLIGIDFSM-NNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEK 308 (652)
Q Consensus 230 ~~~~~~~l~~L~~L~ls~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 308 (652)
+|. +..+++|+.|+|++ |+|+++.+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..
T Consensus 24 ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 102 (347)
T 2ifg_A 24 LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG 102 (347)
T ss_dssp TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS
T ss_pred cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHccc
Confidence 444 55555566666664 6666666666777777777777777777666667777777777777777777666666665
Q ss_pred CCCCceEEeecCcCcccC
Q 041689 309 LSYLEHLNLSFNKLEGEI 326 (652)
Q Consensus 309 l~~L~~L~L~~N~l~~~~ 326 (652)
++ |+.|+|++|+|.|.+
T Consensus 103 ~~-L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 103 LS-LQELVLSGNPLHCSC 119 (347)
T ss_dssp CC-CCEEECCSSCCCCCG
T ss_pred CC-ceEEEeeCCCccCCC
Confidence 55 777777777777654
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.41 E-value=4e-15 Score=155.08 Aligned_cols=162 Identities=19% Similarity=0.132 Sum_probs=76.4
Q ss_pred CCCCCEEECCCCcCcccCCccccCC-----CCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcc
Q 041689 28 PHNLEELLLGQNNLVGVVPAAIFDV-----STLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLS 102 (652)
Q Consensus 28 ~~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls 102 (652)
+++|++|+|++|+|+......|..+ ++|+.|+|++|.|+..... .-...+++|+.|+|+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~----------------~l~~~L~~L~~L~Ls 134 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLR----------------TLLPVFLRARKLGLQ 134 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHH----------------HTHHHHHTEEEEECC
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHH----------------HHHHHHHhccHhhcC
Confidence 3456666666666654333333222 4666666666665421100 001123455666666
Q ss_pred cCCCcccCCccchhcc----cccCcEEEccCCccccc----CCccccCCCCCCEEEecCcccccc----CCccccCCCCC
Q 041689 103 NNPLNGILPRMSIGNL----SHSLEIFDMSKCNVSGG----IPEEIGNLTNLTAIYLGGNKLNGS----IPFTLRELQKL 170 (652)
Q Consensus 103 ~N~l~~~~~~~~~~~l----~~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L 170 (652)
+|.|++.... .+... ..+|++|+|++|.|+.. ++..+..+++|++|+|++|.|+.. +...+...++|
T Consensus 135 ~n~l~~~~~~-~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L 213 (372)
T 3un9_A 135 LNSLGPEACK-DLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQL 213 (372)
T ss_dssp SSCCCHHHHH-HHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCC
T ss_pred CCCCCHHHHH-HHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCc
Confidence 6666543222 11110 12266666666665432 233334555566666666655432 13334445555
Q ss_pred cEEecccCccccc----cCccccCCCCCcEEEccCCcccc
Q 041689 171 QYVGLKDNKLEGT----IPYDIFRLVKLYKLDLGGNKLSG 206 (652)
Q Consensus 171 ~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~ 206 (652)
++|+|++|.|+.. ++..+...++|++|+|++|.|+.
T Consensus 214 ~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 214 QELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp CEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred CeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 5555555555532 22223334555555555555553
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.39 E-value=5.5e-15 Score=154.07 Aligned_cols=168 Identities=17% Similarity=0.181 Sum_probs=77.2
Q ss_pred cCcEEEccCCcccccCCccccCC-----CCCCEEEecCccccccCCccc-cCCCCCcEEecccCccccccCcccc-----
Q 041689 121 SLEIFDMSKCNVSGGIPEEIGNL-----TNLTAIYLGGNKLNGSIPFTL-RELQKLQYVGLKDNKLEGTIPYDIF----- 189 (652)
Q Consensus 121 ~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~----- 189 (652)
.|+.|+|++|.|+......+..+ ++|++|+|++|.|+......+ ..+++|++|+|++|.|+......+.
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 36666666666654433333222 456666666666543222222 2334555555555555433222221
Q ss_pred CCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCCcccCCCCccceEecccccCCcc----CcccccCCCCCc
Q 041689 190 RLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLPLEIGNLKVLIGIDFSMNNFSSV----IPTTIGSLKDLQ 265 (652)
Q Consensus 190 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~L~~L~ls~N~l~~~----~~~~~~~l~~L~ 265 (652)
..++|+.|+|++|.|+...... ++..+..+++|++|+|++|.|+.. ++..+...++|+
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~------------------l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~ 214 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAV------------------LMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQ 214 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHH------------------HHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCC
T ss_pred cCCccceeeCCCCCCChHHHHH------------------HHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcC
Confidence 2344555555555544211111 111222333444444444444421 133444555666
Q ss_pred EEEccCCcCCCc----ccccccccccCcceeccccccCCCCchhh
Q 041689 266 YLFLGYNILKGS----IPDSVGDLISLKSLNFSNNNLSGAIPLLL 306 (652)
Q Consensus 266 ~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 306 (652)
.|+|++|.|++. ++..+...++|+.|||++|.|+......+
T Consensus 215 ~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 215 ELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp EEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred eEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 666666666532 22233344566666666666654333333
No 404
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.39 E-value=1.8e-12 Score=128.51 Aligned_cols=147 Identities=13% Similarity=0.056 Sum_probs=116.3
Q ss_pred HHHhcCCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcC-CCeeeeEEeeeecCCceEEE
Q 041689 421 CRATYGFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH-YRNLVKIISSCSNEEFKELV 499 (652)
Q Consensus 421 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv 499 (652)
.....+|++....+.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..++++++++...+..|+|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 344567888888898999999999754 6899999987542233457899999999984 67788999999888899999
Q ss_pred EEccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcC--------------------------------------
Q 041689 500 LEHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFN-------------------------------------- 541 (652)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-------------------------------------- 541 (652)
|||++|.++.+.... ......++.++++++..||+.
T Consensus 89 ~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (263)
T 3tm0_A 89 MSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT 162 (263)
T ss_dssp EECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTC
T ss_pred EEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccc
Confidence 999999999875321 122346889999999999981
Q ss_pred ------------------CCCCeEecCCCCCCeeeCCCCcEEEecccCCcc
Q 041689 542 ------------------FLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL 574 (652)
Q Consensus 542 ------------------~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~ 574 (652)
..+.++|+|++|.||++++++.+.|+||+.+..
T Consensus 163 ~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 163 PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 013699999999999998776677999998763
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.36 E-value=3e-11 Score=127.29 Aligned_cols=283 Identities=13% Similarity=0.120 Sum_probs=195.2
Q ss_pred CCCCCCEEECCCCc---CcccCCccccCCCCCCEEEcCCCcCeeccCCCccc-------cccCCCCCcccccccCCCCCC
Q 041689 27 NPHNLEELLLGQNN---LVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADN-------YLTSSTPELSFLSSLSNCKSL 96 (652)
Q Consensus 27 ~~~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-------~l~~~~~~~~~~~~l~~l~~L 96 (652)
++.+|+.+.++.|. ++.+-..+|.+..+|+.+.+..+ ++.+....+.. .+.... ....-.+|.++.+|
T Consensus 85 ~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~~-~~I~~~~F~~c~~L 162 (394)
T 4gt6_A 85 NCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEGV-TSVADGMFSYCYSL 162 (394)
T ss_dssp TCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTC
T ss_pred CCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccccccee-eeecccceeccccc
Confidence 67899999988764 77667788888888888877654 44333332211 111111 11122468899999
Q ss_pred cEEEcccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccccCCcccc-----------
Q 041689 97 VVFLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLR----------- 165 (652)
Q Consensus 97 ~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~----------- 165 (652)
+.+.+..+ ++.+... .|.. . .|+.+.+..+-. .+...+|.++.+|+......+.........+.
T Consensus 163 ~~i~~~~~-~~~I~~~-aF~~-~-~l~~i~ip~~~~-~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (394)
T 4gt6_A 163 HTVTLPDS-VTAIEER-AFTG-T-ALTQIHIPAKVT-RIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIR 237 (394)
T ss_dssp CEEECCTT-CCEECTT-TTTT-C-CCSEEEECTTCC-EECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEE
T ss_pred ccccccce-eeEeccc-cccc-c-ceeEEEECCccc-ccccchhhhccccceecccccccccccceeecccccccccccc
Confidence 99999865 6666655 5554 3 499999986644 47788999999999998887766532222121
Q ss_pred --CCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCCC-cccCCCCccce
Q 041689 166 --ELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPLP-LEIGNLKVLIG 242 (652)
Q Consensus 166 --~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~-~~~~~l~~L~~ 242 (652)
....+..+.+. +.++.....+|..+.+|+.+.+..+..+ +...+|.++++|+.+.+..+-..++ ..|.++.+|+.
T Consensus 238 ~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~~i~~I~~~aF~~c~~L~~ 315 (394)
T 4gt6_A 238 YPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSSRITELPESVFAGCISLKS 315 (394)
T ss_dssp CCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCTTCCEECTTTTTTCTTCCE
T ss_pred cccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCCCcccccCceeecCCCCcCE
Confidence 22334444443 3344455678889999999999876654 7788999999999999986644444 45889999999
Q ss_pred EecccccCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcC
Q 041689 243 IDFSMNNFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKL 322 (652)
Q Consensus 243 L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 322 (652)
+++..+ ++.+...+|.++.+|+.+.+..+ ++.+...+|.++++|+.+++.+|... -..+.....|+.+.+..|.+
T Consensus 316 i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 316 IDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC----------
T ss_pred EEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCCE
Confidence 999765 77777889999999999999765 66677889999999999999998764 24677788899988877765
Q ss_pred c
Q 041689 323 E 323 (652)
Q Consensus 323 ~ 323 (652)
.
T Consensus 391 ~ 391 (394)
T 4gt6_A 391 D 391 (394)
T ss_dssp -
T ss_pred E
Confidence 4
No 406
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=3.4e-12 Score=132.16 Aligned_cols=99 Identities=22% Similarity=0.258 Sum_probs=56.8
Q ss_pred EEccCC-cccccCCccccCCCCCCEEEecC-ccccccCCccccCCCCCcEEecccCccccccCccccCCCCCcEEEccCC
Q 041689 125 FDMSKC-NVSGGIPEEIGNLTNLTAIYLGG-NKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGN 202 (652)
Q Consensus 125 L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 202 (652)
++++++ +|++ +|. +..+++|+.|+|++ |+|+++.+..|.+|++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455555 5553 344 55556666666664 6666555555666666666666666666555555666666666666666
Q ss_pred cccccccccCCCCCCCCEEEccCC
Q 041689 203 KLSGSILTCFSNLASLRTLSLSYN 226 (652)
Q Consensus 203 ~l~~~~~~~~~~l~~L~~L~Ls~N 226 (652)
+|+++++..|..++ |+.|+|++|
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N 113 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGN 113 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSS
T ss_pred ccceeCHHHcccCC-ceEEEeeCC
Confidence 66655555554443 555555544
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.27 E-value=1.4e-11 Score=121.97 Aligned_cols=137 Identities=14% Similarity=0.097 Sum_probs=102.7
Q ss_pred CCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCe--eeeEEeeeecCCceEEEEEcc
Q 041689 426 GFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRN--LVKIISSCSNEEFKELVLEHM 503 (652)
Q Consensus 426 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~ 503 (652)
+|.+....+.|..+.||++...+|..+++|+.... ....+..|+++++.+.+.+ +++++++...++..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34443333456679999998777888999997543 3356788999999986444 566888888878899999999
Q ss_pred CCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCC-----------------------------------------
Q 041689 504 PHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF----------------------------------------- 542 (652)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------------- 542 (652)
+|.++. ... .+ ...++.++++.+..||+..
T Consensus 98 ~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 98 PGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp SSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred CCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 998884 211 12 2357788888888888742
Q ss_pred --------------CCCeEecCCCCCCeeeCCCCcEEEecccCCcc
Q 041689 543 --------------LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL 574 (652)
Q Consensus 543 --------------~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~ 574 (652)
...++|+|++|.||++++++.+.|+|||.+..
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998877778999999863
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.16 E-value=2.9e-09 Score=111.43 Aligned_cols=282 Identities=12% Similarity=0.076 Sum_probs=170.6
Q ss_pred CCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCeeccCCCcccc-ccC----CCCCcccccccCCCCCCcEEEc
Q 041689 27 NPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLSGSLSSIADNY-LTS----STPELSFLSSLSNCKSLVVFLL 101 (652)
Q Consensus 27 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-l~~----~~~~~~~~~~l~~l~~L~~L~L 101 (652)
...+|+.+.+. ..++.+-..+|.++.+|+.++|..+ ++.+....+.+- +.. .......-.+|.+. +|+.+.+
T Consensus 44 ~~~~i~~v~ip-~~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c~l~~i~~~~~l~~I~~~aF~~~-~L~~i~l 120 (379)
T 4h09_A 44 DRDRISEVRVN-SGITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADTKLQSYTGMERVKKFGDYVFQGT-DLDDFEF 120 (379)
T ss_dssp GGGGCSEEEEC-TTEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCCCCEEEECTTCCEECTTTTTTC-CCSEEEC
T ss_pred cccCCEEEEeC-CCccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCCCCceEECCceeeEeccceeccC-CcccccC
Confidence 45678888885 4577777888999999999988754 665544332210 000 00000011123332 5666666
Q ss_pred ccCCCcccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCccccc------------cCCccccCCCC
Q 041689 102 SNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNG------------SIPFTLRELQK 169 (652)
Q Consensus 102 s~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~------------~~~~~~~~l~~ 169 (652)
..+ ++.+... .|.+. +|+.+.+.. .++.+...+|..+.+++.+.+..+.... .....+.....
T Consensus 121 p~~-~~~i~~~-~F~~~--~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (379)
T 4h09_A 121 PGA-TTEIGNY-IFYNS--SVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKT 195 (379)
T ss_dssp CTT-CCEECTT-TTTTC--CCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCC
T ss_pred CCc-ccccccc-ccccc--eeeeeeccc-eeeccccchhcccccccccccccccceeecccceecccccceecccccccc
Confidence 543 2223322 33322 255544433 3444555666666666666665543321 11122333344
Q ss_pred CcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCCCCCCCCEEEccCCCCCC-CcccCCCCccceEecccc
Q 041689 170 LQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFSNLASLRTLSLSYNDGPL-PLEIGNLKVLIGIDFSMN 248 (652)
Q Consensus 170 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~-~~~~~~l~~L~~L~ls~N 248 (652)
+..+.+..+.-. .....+....+|+.+.+..+ +..+...+|.++..|+.+.+..+-..+ ...|.++.+|+.+.+..+
T Consensus 196 ~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~v~~I~~~aF~~~~~l~~i~l~~~ 273 (379)
T 4h09_A 196 GTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKNVTSIGSFLLQNCTALKTLNFYAK 273 (379)
T ss_dssp CSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTTCCEECTTTTTTCTTCCEEEECCC
T ss_pred ccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCCccEeCccccceeehhcccccccc
Confidence 444444333322 44556667778888887655 455667788888888888887763233 345777888888888644
Q ss_pred cCCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecC
Q 041689 249 NFSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFN 320 (652)
Q Consensus 249 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 320 (652)
+..+...+|.++.+|+.+.+.++.++.+.+.+|.++.+|+.++|.++ ++.+-..+|.++.+|+.+.+..+
T Consensus 274 -i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 274 -VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp -CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred -ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 66566678888888888888888887666778888888888888655 66566778888888888877544
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.13 E-value=3.9e-09 Score=110.40 Aligned_cols=266 Identities=12% Similarity=0.095 Sum_probs=184.6
Q ss_pred ccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcEEEcccCCCcccCCccchhcccccCcEEE
Q 041689 47 AAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVVFLLSNNPLNGILPRMSIGNLSHSLEIFD 126 (652)
Q Consensus 47 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~ 126 (652)
.+|....+|+.+.+..+ ++.+.. .+|.++.+|+.++|..+ ++.+... +|.+. +|+.+.
T Consensus 40 ~~~~~~~~i~~v~ip~~-vt~Ig~-----------------~aF~~C~~L~~I~lp~~-v~~Ig~~-aF~~c--~l~~i~ 97 (379)
T 4h09_A 40 PWYKDRDRISEVRVNSG-ITSIGE-----------------ANFNSCYNMTKVTVAST-VTSIGDG-AFADT--KLQSYT 97 (379)
T ss_dssp TTGGGGGGCSEEEECTT-EEEECT-----------------TTTTTCTTCCEEEECTT-CCEECTT-TTTTC--CCCEEE
T ss_pred cccccccCCEEEEeCCC-ccChHH-----------------HHhhCCCCCCEEEeCCc-ceEechh-hhcCC--CCceEE
Confidence 35677788999988753 665544 36889999999999754 7777665 66665 388887
Q ss_pred ccCCcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcc--
Q 041689 127 MSKCNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKL-- 204 (652)
Q Consensus 127 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l-- 204 (652)
+.. +++.+...+|.++ +|+.+.+..+- +.+...+|.+. +|+...+..+ ++......|....+++.+.+..+..
T Consensus 98 ~~~-~l~~I~~~aF~~~-~L~~i~lp~~~-~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~ 172 (379)
T 4h09_A 98 GME-RVKKFGDYVFQGT-DLDDFEFPGAT-TEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNY 172 (379)
T ss_dssp ECT-TCCEECTTTTTTC-CCSEEECCTTC-CEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSE
T ss_pred CCc-eeeEeccceeccC-CcccccCCCcc-ccccccccccc-eeeeeeccce-eeccccchhccccccccccccccccee
Confidence 764 4666667777765 78888887653 32444555443 4555544433 3324444555555555555443221
Q ss_pred ---------------------------------cccccccCCCCCCCCEEEccCCCCCC-CcccCCCCccceEecccccC
Q 041689 205 ---------------------------------SGSILTCFSNLASLRTLSLSYNDGPL-PLEIGNLKVLIGIDFSMNNF 250 (652)
Q Consensus 205 ---------------------------------~~~~~~~~~~l~~L~~L~Ls~N~~~~-~~~~~~l~~L~~L~ls~N~l 250 (652)
.......|....+|+.+.+..+-..+ ...+.++..|+.+.+..+ +
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~~~~i~~~~f~~~~~L~~i~lp~~-v 251 (379)
T 4h09_A 173 VAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSGVTTLGDGAFYGMKALDEIAIPKN-V 251 (379)
T ss_dssp EEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTTCCEECTTTTTTCSSCCEEEECTT-C
T ss_pred ecccceecccccceeccccccccccccccccceeEEeecccccccccceeeeccceeEEccccccCCccceEEEcCCC-c
Confidence 12334567778899999998774333 445888999999999876 7
Q ss_pred CccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccccccCCCCchhhcCCCCCceEEeecCcCcccCCCC-
Q 041689 251 SSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSNNNLSGAIPLLLEKLSYLEHLNLSFNKLEGEIPKG- 329 (652)
Q Consensus 251 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~- 329 (652)
+.+...+|.++.+|+.+.+..+ ++.+...+|..+++|+.+.+.++.++.+...+|.++.+|+.++|..+ ++ .+...
T Consensus 252 ~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~a 328 (379)
T 4h09_A 252 TSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYA 328 (379)
T ss_dssp CEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTT
T ss_pred cEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHH
Confidence 7777889999999999999765 55567788999999999999999998788899999999999999755 54 23322
Q ss_pred -CCCCCcccccccCC
Q 041689 330 -GSFGNFSAESFEGN 343 (652)
Q Consensus 330 -~~~~~l~~~~~~~N 343 (652)
....+|+.+.+..+
T Consensus 329 F~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 329 FKNCKALSTISYPKS 343 (379)
T ss_dssp TTTCTTCCCCCCCTT
T ss_pred hhCCCCCCEEEECCc
Confidence 23345666666443
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.10 E-value=3.9e-10 Score=117.20 Aligned_cols=142 Identities=15% Similarity=0.180 Sum_probs=107.1
Q ss_pred ccceeccccceEEEEEEeCCCcEEEEEEee--ccc-chhhhhHHHHHHHHHhcC--CCeeeeEEeeeecC---CceEEEE
Q 041689 429 ENNLIGKGGFGTIYKSRIGDGMEVAVKVFH--LQC-GRAFKSFDIECEIMKSIH--YRNLVKIISSCSNE---EFKELVL 500 (652)
Q Consensus 429 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~---~~~~lv~ 500 (652)
..+.++.|.++.||++... +..+++|+.. ... ......+.+|.++++.+. +..+++++.++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4578899999999998875 4688898875 332 123457889999999996 45578888888766 4589999
Q ss_pred EccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCC--------------------------------------
Q 041689 501 EHMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF-------------------------------------- 542 (652)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------------------------------------- 542 (652)
||++|..+.+... ..++..++..++.+++++|..||+..
T Consensus 121 e~v~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 121 EFVSGRVLWDQSL---PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp ECCCCBCCCCTTC---TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred EecCCeecCCCcc---ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 9999988754211 13677888889999999999999731
Q ss_pred -----------------CCCeEecCCCCCCeeeCCCC--cEEEecccCCcc
Q 041689 543 -----------------LVPVIHCDLKPSNVLLDDTM--VAHLSDFGITKL 574 (652)
Q Consensus 543 -----------------~~~iiH~dlkp~NIll~~~~--~~kl~Dfg~~~~ 574 (652)
.+.++|+|++|.||+++.++ .+.|+||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 24799999999999998765 368999999874
No 411
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.05 E-value=4.2e-10 Score=113.99 Aligned_cols=194 Identities=16% Similarity=0.161 Sum_probs=128.1
Q ss_pred cceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcC-CCe--eeeEEeeeecCC---ceEEEEEcc
Q 041689 430 NNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH-YRN--LVKIISSCSNEE---FKELVLEHM 503 (652)
Q Consensus 430 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~e~~ 503 (652)
.+.++.|....||++. ..+++|+.... .....+.+|.++++.+. +.. +++++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4678999999999863 56899986533 34567889999998883 332 445555544333 458999999
Q ss_pred CCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcC------------------------------------------
Q 041689 504 PHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFN------------------------------------------ 541 (652)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~------------------------------------------ 541 (652)
+|.++.+.... .++..++..++.+++..+..||+.
T Consensus 99 ~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 99888753332 367777888889999999988861
Q ss_pred -------------CCCCeEecCCCCCCeeeCC--CCcEEEecccCCccccCCCCccccc-c------------ccCCccc
Q 041689 542 -------------FLVPVIHCDLKPSNVLLDD--TMVAHLSDFGITKLLIGEDQSMTQT-Q------------TLATIGY 593 (652)
Q Consensus 542 -------------~~~~iiH~dlkp~NIll~~--~~~~kl~Dfg~~~~~~~~~~~~~~~-~------------~~gt~~y 593 (652)
..+.++|+|++|.||++++ +..+.|+||+.+..-... ...... . .....++
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD-NDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT-HHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH-HHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 1136899999999999998 567899999998743110 000000 0 0000011
Q ss_pred cC-ccccccCccCcccchhhHHHHHHHHHhCCCCcchhhhhhh
Q 041689 594 IA-PEYGREGRVFANGDVYSFGIMLMEIHSAKQQCVSFVFNLA 635 (652)
Q Consensus 594 ~a-PE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~l~~l~ 635 (652)
.. |+... ......+.|++|.++|.+.+|..++-..-...+
T Consensus 255 ~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~~~~g~~~~ 295 (304)
T 3sg8_A 255 KDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDWYEEGLNEI 295 (304)
T ss_dssp SCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 11 22211 112335899999999999999999766544433
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.99 E-value=1.8e-10 Score=118.84 Aligned_cols=153 Identities=20% Similarity=0.219 Sum_probs=70.5
Q ss_pred ccCCCCCcEEecccCccccccCccccCCCCCcEEEccCCcccccccccCC--CCCCCCEEEccCC--C-C-C-----CCc
Q 041689 164 LRELQKLQYVGLKDNKLEGTIPYDIFRLVKLYKLDLGGNKLSGSILTCFS--NLASLRTLSLSYN--D-G-P-----LPL 232 (652)
Q Consensus 164 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N--~-~-~-----~~~ 232 (652)
+..+|+|+.|.|++|.-. .++. + .+++|+.|+|..+.+.......+. .+++|++|+|+.+ . + . +..
T Consensus 168 l~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~ 244 (362)
T 2ra8_A 168 LDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRP 244 (362)
T ss_dssp HHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGG
T ss_pred HhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHH
Confidence 344455555555554211 1121 2 245566666655555432222222 4556666655421 0 0 0 000
Q ss_pred cc--CCCCccceEecccccCCccCcccc---cCCCCCcEEEccCCcCCCc----ccccccccccCcceeccccccCCCCc
Q 041689 233 EI--GNLKVLIGIDFSMNNFSSVIPTTI---GSLKDLQYLFLGYNILKGS----IPDSVGDLISLKSLNFSNNNLSGAIP 303 (652)
Q Consensus 233 ~~--~~l~~L~~L~ls~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~ 303 (652)
.+ ..+++|+.|+|.+|.+....+..+ ..+++|++|+|+.|.|++. ++..+..+++|+.|+|++|.|+...-
T Consensus 245 ~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~ 324 (362)
T 2ra8_A 245 LFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMK 324 (362)
T ss_dssp GSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHH
T ss_pred HHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHH
Confidence 11 234556666666665543222222 2355666666666666542 23333455666666666666653333
Q ss_pred hhhcC-CCCCceEEeecCc
Q 041689 304 LLLEK-LSYLEHLNLSFNK 321 (652)
Q Consensus 304 ~~~~~-l~~L~~L~L~~N~ 321 (652)
..+.. + ...+++++|+
T Consensus 325 ~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 325 KELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHC--CSEEECCSBC
T ss_pred HHHHHHc--CCEEEecCCc
Confidence 33332 2 2345666555
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.92 E-value=2.3e-10 Score=118.15 Aligned_cols=209 Identities=14% Similarity=0.154 Sum_probs=118.0
Q ss_pred CCCCCCEEECCCCcCcc-c-------CCccccCCCCCCEEEcCCCcCeeccCCCccccccCCCCCcccccccCCCCCCcE
Q 041689 27 NPHNLEELLLGQNNLVG-V-------VPAAIFDVSTLKDLALQDNYLSGSLSSIADNYLTSSTPELSFLSSLSNCKSLVV 98 (652)
Q Consensus 27 ~~~~L~~L~Ls~N~l~~-~-------~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~ 98 (652)
.+..++.|.+......+ . +..+...+++|+.|.+..+...... ++.... ......+..+++|+.
T Consensus 105 ~~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~-------is~~~~-~~L~~ll~~~P~L~~ 176 (362)
T 2ra8_A 105 KLPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQE-------ISWIEQ-VDLSPVLDAMPLLNN 176 (362)
T ss_dssp TGGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCC-------GGGCBC-CBCHHHHHTCTTCCE
T ss_pred CchhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcc-------cccccc-cCHHHHHhcCCCCcE
Confidence 34566777777555432 1 1223445678888887665321100 000000 000122456678888
Q ss_pred EEcccCCCcccCCccchhcccccCcEEEccCCcccccCCcccc--CCCCCCEEEecC--cccccc-----CCccc--cCC
Q 041689 99 FLLSNNPLNGILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIG--NLTNLTAIYLGG--NKLNGS-----IPFTL--REL 167 (652)
Q Consensus 99 L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~--N~l~~~-----~~~~~--~~l 167 (652)
|+|++|.-..+.+ + .+++ |+.|+|..|.++......+. .+++|++|+|+. |...+. +...+ ..+
T Consensus 177 L~L~g~~~l~l~~---~-~~~~-L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~ 251 (362)
T 2ra8_A 177 LKIKGTNNLSIGK---K-PRPN-LKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRF 251 (362)
T ss_dssp EEEECCBTCBCCS---C-BCTT-CSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTC
T ss_pred EEEeCCCCceecc---c-cCCC-CcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCC
Confidence 8888773112221 1 2444 88888888887654434443 688888888863 222111 11122 247
Q ss_pred CCCcEEecccCccccccCcccc---CCCCCcEEEccCCcccccc----cccCCCCCCCCEEEccCCCCCCCcccCCCCc-
Q 041689 168 QKLQYVGLKDNKLEGTIPYDIF---RLVKLYKLDLGGNKLSGSI----LTCFSNLASLRTLSLSYNDGPLPLEIGNLKV- 239 (652)
Q Consensus 168 ~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~~~~~~~~~~l~~- 239 (652)
++|++|+|++|.+....+..+. .+++|++|+|+.|.|++.. +..+..+++|+.|+|++|... ......+..
T Consensus 252 p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~-d~~~~~l~~a 330 (362)
T 2ra8_A 252 PNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS-DEMKKELQKS 330 (362)
T ss_dssp TTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC-HHHHHHHHHH
T ss_pred CCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC-HHHHHHHHHH
Confidence 8899999988888754443333 4678999999999887642 333356788999999888411 111222222
Q ss_pred -cceEeccccc
Q 041689 240 -LIGIDFSMNN 249 (652)
Q Consensus 240 -L~~L~ls~N~ 249 (652)
...++++.|+
T Consensus 331 lg~~~~~~~~~ 341 (362)
T 2ra8_A 331 LPMKIDVSDSQ 341 (362)
T ss_dssp CCSEEECCSBC
T ss_pred cCCEEEecCCc
Confidence 2568888887
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.76 E-value=5.9e-08 Score=98.85 Aligned_cols=136 Identities=16% Similarity=0.173 Sum_probs=103.1
Q ss_pred CCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCC----CeeeeEEeeeecCCceEEEEE
Q 041689 426 GFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHY----RNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 426 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~lv~e 501 (652)
.+...+.++.|..+.||++ |..+++|+.... .....+.+|.++++.+.+ ..+++++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5667788999999999998 677999986433 223568899999998865 234555555 56789999
Q ss_pred ccCCCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCC--------------------------------------
Q 041689 502 HMPHGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFL-------------------------------------- 543 (652)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-------------------------------------- 543 (652)
|++|.++...... .++..+...++.+++..+..||+...
T Consensus 108 ~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9999988643321 35666777788888888888885421
Q ss_pred ----------------------CCeEecCCCCCCeeeCCCCcEEEecccCCcc
Q 041689 544 ----------------------VPVIHCDLKPSNVLLDDTMVAHLSDFGITKL 574 (652)
Q Consensus 544 ----------------------~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~ 574 (652)
+.++|+|++|.||++++++.+.|+||+.+..
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2459999999999999977779999999864
No 415
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.64 E-value=1.6e-07 Score=93.82 Aligned_cols=77 Identities=13% Similarity=0.069 Sum_probs=61.5
Q ss_pred CccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCC---eeeeEEeeeecCCceEEEEEccC
Q 041689 428 NENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYR---NLVKIISSCSNEEFKELVLEHMP 504 (652)
Q Consensus 428 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~~ 504 (652)
...+.++.|.++.||++...+|+.++||+...........+..|++.++.+.+. .+++++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 345789999999999999888999999986543333346789999999999764 577888763 3689999999
Q ss_pred CCCh
Q 041689 505 HGSL 508 (652)
Q Consensus 505 ~g~L 508 (652)
++++
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9864
No 416
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.58 E-value=4.4e-07 Score=91.64 Aligned_cols=136 Identities=13% Similarity=0.105 Sum_probs=96.8
Q ss_pred cceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCC---eeeeEEeeee-cCCceEEEEEccCC
Q 041689 430 NNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYR---NLVKIISSCS-NEEFKELVLEHMPH 505 (652)
Q Consensus 430 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~ 505 (652)
.+.++.|....||+. |..+++|+... ......+.+|.++++.+.+. .+.+++.+.. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456888888899987 57789998532 23456788999999999642 3566666664 45667899999999
Q ss_pred CChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcC--------------------------------------------
Q 041689 506 GSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFN-------------------------------------------- 541 (652)
Q Consensus 506 g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-------------------------------------------- 541 (652)
.++.+.... .++..+...++.++++.|..||+.
T Consensus 98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 888763221 234455555666666666666642
Q ss_pred -------------CCCCeEecCCCCCCeeeCC---CCc-EEEecccCCcc
Q 041689 542 -------------FLVPVIHCDLKPSNVLLDD---TMV-AHLSDFGITKL 574 (652)
Q Consensus 542 -------------~~~~iiH~dlkp~NIll~~---~~~-~kl~Dfg~~~~ 574 (652)
..+.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235799999999999987 345 58999998864
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.58 E-value=8.6e-09 Score=100.84 Aligned_cols=96 Identities=21% Similarity=0.265 Sum_probs=56.4
Q ss_pred EEccCCccc---ccCCccccCCCCCCEEEecCcccccc--CCccccCCCCCcEEecccCccccccCccccCCC--CCcEE
Q 041689 125 FDMSKCNVS---GGIPEEIGNLTNLTAIYLGGNKLNGS--IPFTLRELQKLQYVGLKDNKLEGTIPYDIFRLV--KLYKL 197 (652)
Q Consensus 125 L~L~~N~l~---~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L 197 (652)
++++.|... ...+-...++++|+.|+|++|+|+++ +|..+..+++|+.|+|++|+|++. ..+..+. +|+.|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 556666433 11222234567777777777777753 345566777777777777777754 2233333 77777
Q ss_pred EccCCccccccc-------ccCCCCCCCCEEE
Q 041689 198 DLGGNKLSGSIL-------TCFSNLASLRTLS 222 (652)
Q Consensus 198 ~L~~N~l~~~~~-------~~~~~l~~L~~L~ 222 (652)
+|++|.+.+..| ..+..+++|+.||
T Consensus 226 ~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 226 WLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp ECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 777777765433 2345566666664
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.57 E-value=8.9e-09 Score=100.74 Aligned_cols=108 Identities=24% Similarity=0.254 Sum_probs=79.0
Q ss_pred cccCCCCCCcE--EEcccCCCcccCC--ccchhcccccCcEEEccCCccccc--CCccccCCCCCCEEEecCccccccCC
Q 041689 88 SSLSNCKSLVV--FLLSNNPLNGILP--RMSIGNLSHSLEIFDMSKCNVSGG--IPEEIGNLTNLTAIYLGGNKLNGSIP 161 (652)
Q Consensus 88 ~~l~~l~~L~~--L~Ls~N~l~~~~~--~~~~~~l~~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~ 161 (652)
+.|...+.|+. ++++.|+...+.. .....+++. |+.|+|++|+|+++ +|..+..+++|+.|+|++|+|++.
T Consensus 135 s~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~-L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-- 211 (267)
T 3rw6_A 135 KGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPE-LLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-- 211 (267)
T ss_dssp TTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTT-CCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--
T ss_pred HHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCC-CCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--
Confidence 34555566666 7788886543321 102245665 99999999999984 457788999999999999999965
Q ss_pred ccccCCC--CCcEEecccCccccccCc-------cccCCCCCcEEE
Q 041689 162 FTLRELQ--KLQYVGLKDNKLEGTIPY-------DIFRLVKLYKLD 198 (652)
Q Consensus 162 ~~~~~l~--~L~~L~L~~N~l~~~~~~-------~~~~l~~L~~L~ 198 (652)
..+..+. +|++|+|++|.+.+..|+ .+..+++|+.||
T Consensus 212 ~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 212 RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 3344444 999999999999976663 467788999885
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.54 E-value=1.8e-08 Score=93.71 Aligned_cols=116 Identities=14% Similarity=0.107 Sum_probs=69.5
Q ss_pred ccCCCCCCcEEEcccC-CCcccCCcc---chhcccccCcEEEccCCccccc----CCccccCCCCCCEEEecCcccccc-
Q 041689 89 SLSNCKSLVVFLLSNN-PLNGILPRM---SIGNLSHSLEIFDMSKCNVSGG----IPEEIGNLTNLTAIYLGGNKLNGS- 159 (652)
Q Consensus 89 ~l~~l~~L~~L~Ls~N-~l~~~~~~~---~~~~l~~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~- 159 (652)
.+...++|++|+|++| .|....... .+...+ +|++|+|++|+|... +...+...++|++|+|++|.|...
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~-~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNT-YVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCC-SCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCC-CcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 3567788888888888 876431110 122223 377777777777642 334455556777777777777632
Q ss_pred ---CCccccCCCCCcEEec--ccCccccc----cCccccCCCCCcEEEccCCccc
Q 041689 160 ---IPFTLRELQKLQYVGL--KDNKLEGT----IPYDIFRLVKLYKLDLGGNKLS 205 (652)
Q Consensus 160 ---~~~~~~~l~~L~~L~L--~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~ 205 (652)
+...+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2444556666777777 66776643 2233444456666666666664
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.52 E-value=9e-07 Score=87.61 Aligned_cols=136 Identities=19% Similarity=0.096 Sum_probs=99.0
Q ss_pred ceeccccce-EEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHHhcC-CCeeeeEEeeeecCCceEEEEEccCCCC
Q 041689 431 NLIGKGGFG-TIYKSRIG-DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH-YRNLVKIISSCSNEEFKELVLEHMPHGS 507 (652)
Q Consensus 431 ~~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g~ 507 (652)
+.+..|..| .||+.... ++..+++|+-... ....+.+|...++.+. +--+.++++++.+.+..++|||+++|.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 345556555 68988754 4678999986543 3456788999998884 3336788888888899999999999988
Q ss_pred hhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCC---------------------------------------------
Q 041689 508 LEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNF--------------------------------------------- 542 (652)
Q Consensus 508 L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------------------------------------------- 542 (652)
+.+...... .....+..+++..|..||...
T Consensus 107 ~~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 107 AFQVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred ccccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 877543221 223346667777777777421
Q ss_pred ----------CCCeEecCCCCCCeeeCCCCcEEEecccCCcc
Q 041689 543 ----------LVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL 574 (652)
Q Consensus 543 ----------~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~ 574 (652)
.+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11379999999999999887778999998864
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.48 E-value=3.5e-08 Score=91.73 Aligned_cols=105 Identities=14% Similarity=0.239 Sum_probs=56.0
Q ss_pred CcEEEccCC-ccccc----CCccccCCCCCCEEEecCcccccc----CCccccCCCCCcEEecccCccccc----cCccc
Q 041689 122 LEIFDMSKC-NVSGG----IPEEIGNLTNLTAIYLGGNKLNGS----IPFTLRELQKLQYVGLKDNKLEGT----IPYDI 188 (652)
Q Consensus 122 L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~ 188 (652)
|++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+.. +...+
T Consensus 38 L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L 117 (185)
T 1io0_A 38 LEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEAL 117 (185)
T ss_dssp CCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGG
T ss_pred CCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHH
Confidence 777777776 66532 334455566677777777766521 223344455666666666666532 23344
Q ss_pred cCCCCCcEEEc--cCCcccccc----cccCCCCCCCCEEEccCC
Q 041689 189 FRLVKLYKLDL--GGNKLSGSI----LTCFSNLASLRTLSLSYN 226 (652)
Q Consensus 189 ~~l~~L~~L~L--~~N~l~~~~----~~~~~~l~~L~~L~Ls~N 226 (652)
...++|++|+| ++|.|.... ...+...++|++|+|++|
T Consensus 118 ~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n 161 (185)
T 1io0_A 118 QSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFT 161 (185)
T ss_dssp GGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCS
T ss_pred HhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCC
Confidence 45555666666 556665321 222333344555555444
No 422
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.45 E-value=4e-07 Score=94.15 Aligned_cols=81 Identities=5% Similarity=-0.070 Sum_probs=57.6
Q ss_pred ccee-ccccceEEEEEEeC-------CCcEEEEEEeeccc---chhhhhHHHHHHHHHhcC-C--CeeeeEEeeeecC--
Q 041689 430 NNLI-GKGGFGTIYKSRIG-------DGMEVAVKVFHLQC---GRAFKSFDIECEIMKSIH-Y--RNLVKIISSCSNE-- 493 (652)
Q Consensus 430 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~-- 493 (652)
.+.| +.|..+.+|+.... ++..+++|+..... ......+.+|+++++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88889999998754 26789999865432 111356788999998884 3 3567788877655
Q ss_pred -CceEEEEEccCCCChhh
Q 041689 494 -EFKELVLEHMPHGSLEK 510 (652)
Q Consensus 494 -~~~~lv~e~~~~g~L~~ 510 (652)
+..++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 45689999999877653
No 423
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.45 E-value=8.9e-07 Score=91.54 Aligned_cols=77 Identities=6% Similarity=0.094 Sum_probs=57.9
Q ss_pred CCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCe--eeeEEeeeecC-CceEEEEEcc
Q 041689 427 FNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRN--LVKIISSCSNE-EFKELVLEHM 503 (652)
Q Consensus 427 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~-~~~~lv~e~~ 503 (652)
....+.++.|....+|+... ++..+++|+.... ..+..|..+++.+.... +.+++.++... +..|+||||+
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 34457788999999999876 5788999987432 35788999999886433 56677776654 6789999999
Q ss_pred CCCChh
Q 041689 504 PHGSLE 509 (652)
Q Consensus 504 ~~g~L~ 509 (652)
+|.++.
T Consensus 117 ~G~~l~ 122 (362)
T 3ovc_A 117 QGVTLQ 122 (362)
T ss_dssp CSEETT
T ss_pred CCCCcc
Confidence 986654
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.13 E-value=9e-06 Score=85.27 Aligned_cols=75 Identities=15% Similarity=0.142 Sum_probs=50.3
Q ss_pred cceeccccceEEEEEEeC-CCcEEEEEEeecccc-------hhhhhHHHHHHHHHhcCC--C-eeeeEEeeeecCCceEE
Q 041689 430 NNLIGKGGFGTIYKSRIG-DGMEVAVKVFHLQCG-------RAFKSFDIECEIMKSIHY--R-NLVKIISSCSNEEFKEL 498 (652)
Q Consensus 430 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~l 498 (652)
.+.+|.|..+.||++... +++.|+||....... .....+..|.++++.+.. | .+++++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999754 468899998653211 123456789999988742 3 34566654 3445689
Q ss_pred EEEccCCC
Q 041689 499 VLEHMPHG 506 (652)
Q Consensus 499 v~e~~~~g 506 (652)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.04 E-value=2e-05 Score=80.69 Aligned_cols=139 Identities=14% Similarity=0.124 Sum_probs=79.8
Q ss_pred ceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCC--CeeeeEEee------eecCCceEEEEEc
Q 041689 431 NLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHY--RNLVKIISS------CSNEEFKELVLEH 502 (652)
Q Consensus 431 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~------~~~~~~~~lv~e~ 502 (652)
+.++.|..+.||++...+| .+++|+.... ...+..|.++++.+.. -.+++++.. ....+..+++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566677899999987554 5999998652 1334456666655531 123334331 1245678899999
Q ss_pred cCCCChh-----h------h---hhc----C--CC-------CCCHHHH-------------------------------
Q 041689 503 MPHGSLE-----K------C---LYS----S--NC-------ILDIFQR------------------------------- 524 (652)
Q Consensus 503 ~~~g~L~-----~------~---l~~----~--~~-------~l~~~~~------------------------------- 524 (652)
++|..+. . . ++. . .. ...|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 0 0 110 0 00 0112110
Q ss_pred HHHHHHHHHHHHHHHc----------CCCCCeEecCCCCCCeeeCCCCcEEEecccCCcc
Q 041689 525 LNIMIDVASVLEYLHF----------NFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL 574 (652)
Q Consensus 525 ~~i~~~i~~~L~~LH~----------~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~ 574 (652)
..+..++..++++|+. .....++|+|+++.||+++.++.+.|+||+.+..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 0111223445666653 1234899999999999998888999999998863
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=98.01 E-value=4.7e-05 Score=76.49 Aligned_cols=137 Identities=14% Similarity=0.083 Sum_probs=92.1
Q ss_pred ccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcC---CCeeeeEEeeeecCCceEEEEEccCC
Q 041689 429 ENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH---YRNLVKIISSCSNEEFKELVLEHMPH 505 (652)
Q Consensus 429 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~ 505 (652)
..+.|+.|....+|+... ++..+++|+.... ....+..|.+.++.+. ...+++++.+....+..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 346789999999999876 5678999987643 3466888999998883 35688889888888889999999998
Q ss_pred CChhh-----------hhhcCCC---------------------CCCHHHHH---HHH----------------HHHHHH
Q 041689 506 GSLEK-----------CLYSSNC---------------------ILDIFQRL---NIM----------------IDVASV 534 (652)
Q Consensus 506 g~L~~-----------~l~~~~~---------------------~l~~~~~~---~i~----------------~~i~~~ 534 (652)
..+.. .++.... .-+|.+.. ++. .+++..
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 75421 1111110 01333211 111 111112
Q ss_pred H-HHHHc-CCCCCeEecCCCCCCeeeCCCCcEEEeccc
Q 041689 535 L-EYLHF-NFLVPVIHCDLKPSNVLLDDTMVAHLSDFG 570 (652)
Q Consensus 535 L-~~LH~-~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg 570 (652)
+ ..|.. ...+.++|+|+.+.|++++.++ +.|+||.
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 2 23321 2246899999999999999887 8999984
No 427
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.75 E-value=0.00014 Score=72.42 Aligned_cols=78 Identities=13% Similarity=0.074 Sum_probs=57.8
Q ss_pred CCCccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcC-C--CeeeeEEeeeecCCceEEEEEc
Q 041689 426 GFNENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH-Y--RNLVKIISSCSNEEFKELVLEH 502 (652)
Q Consensus 426 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~~~lv~e~ 502 (652)
.....+.+|.|..+.||+.+..+|+.|++|+...........++.|++.|+.+. . --+++++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 345567899999999999999999999999876544344456889999999884 2 2345555542 34789999
Q ss_pred cCCCC
Q 041689 503 MPHGS 507 (652)
Q Consensus 503 ~~~g~ 507 (652)
++++.
T Consensus 92 l~~~~ 96 (288)
T 3f7w_A 92 VDERP 96 (288)
T ss_dssp CCCCC
T ss_pred ecccC
Confidence 98764
No 428
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.75 E-value=0.00014 Score=73.58 Aligned_cols=158 Identities=13% Similarity=0.121 Sum_probs=90.1
Q ss_pred cccHHHHHHHhcCCCcc-----ceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCe--eeeE
Q 041689 414 RFSYLEVCRATYGFNEN-----NLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRN--LVKI 486 (652)
Q Consensus 414 ~~~~~~~~~~~~~y~~~-----~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~ 486 (652)
.++.+++.....+|... +.|+.|....+|+....+| .+++|+.... .....+..|.++++.+.... ++++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 45666666666666542 4566688889999887555 7889988653 12345667888887774222 3344
Q ss_pred Eee------eecCCceEEEEEccCCCChhh-----h---------hhcC----CCC----CC---HHHHHH---------
Q 041689 487 ISS------CSNEEFKELVLEHMPHGSLEK-----C---------LYSS----NCI----LD---IFQRLN--------- 526 (652)
Q Consensus 487 ~~~------~~~~~~~~lv~e~~~~g~L~~-----~---------l~~~----~~~----l~---~~~~~~--------- 526 (652)
+.. ....+..+++|+|++|..+.. + ++.. ... .. |.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 322 122356789999999865321 0 1110 000 01 111000
Q ss_pred ---HHHHHHHHHHHHHcC----CCCCeEecCCCCCCeeeCCCCcEEEecccCCcc
Q 041689 527 ---IMIDVASVLEYLHFN----FLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL 574 (652)
Q Consensus 527 ---i~~~i~~~L~~LH~~----~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~ 574 (652)
+...+...+++++.. ...+++|+|+.+.||++++++.+.++||+.+..
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 001133445555432 134799999999999999876668999998763
No 429
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.72 E-value=0.00013 Score=77.06 Aligned_cols=74 Identities=7% Similarity=0.045 Sum_probs=46.2
Q ss_pred ccceeccccceEEEEEEeCCCcEEEEEEeeccc-------c--hhhhhHHHHHHHHH-hcCCCeeeeEEeeeecCCceEE
Q 041689 429 ENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQC-------G--RAFKSFDIECEIMK-SIHYRNLVKIISSCSNEEFKEL 498 (652)
Q Consensus 429 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-------~--~~~~~~~~E~~~l~-~l~h~niv~~~~~~~~~~~~~l 498 (652)
..+.+|.|..+.||++.. +++.++||...... . .....++.|+..+. ......+++++.+. .+..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 346789999999999965 56789999532210 0 02223444443332 22334567777665 466789
Q ss_pred EEEcc-CC
Q 041689 499 VLEHM-PH 505 (652)
Q Consensus 499 v~e~~-~~ 505 (652)
||||+ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 430
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.69 E-value=1.8e-05 Score=71.74 Aligned_cols=84 Identities=15% Similarity=0.090 Sum_probs=58.2
Q ss_pred CccceEecccccCCccCcccccCCCCCcEEEccCCc-CCCccccccccc----ccCcceecccc-ccCCCCchhhcCCCC
Q 041689 238 KVLIGIDFSMNNFSSVIPTTIGSLKDLQYLFLGYNI-LKGSIPDSVGDL----ISLKSLNFSNN-NLSGAIPLLLEKLSY 311 (652)
Q Consensus 238 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N-~l~~~~~~~~~~l~~ 311 (652)
..|+.||++++.++..--..+.++++|++|+|+++. |++.--..+..+ ++|+.|+|+++ ++|..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 457777777777765444556778888888888884 664333344443 46888888887 476443445677888
Q ss_pred CceEEeecCc
Q 041689 312 LEHLNLSFNK 321 (652)
Q Consensus 312 L~~L~L~~N~ 321 (652)
|+.|++++++
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 8888888765
No 431
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.65 E-value=1.8e-05 Score=71.66 Aligned_cols=81 Identities=11% Similarity=0.058 Sum_probs=42.6
Q ss_pred CcEEEccCCcccccCCccccCCCCCCEEEecCcc-ccccCCccccCC----CCCcEEecccCc-cccccCccccCCCCCc
Q 041689 122 LEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNK-LNGSIPFTLREL----QKLQYVGLKDNK-LEGTIPYDIFRLVKLY 195 (652)
Q Consensus 122 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~L~~N~-l~~~~~~~~~~l~~L~ 195 (652)
|+.||++++.|+..--..+.++++|++|+|+++. |+..--..+..+ ++|++|+|++|. |+..--..+..+++|+
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~ 142 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLK 142 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCC
Confidence 7777777777765544556667777777777764 442222223332 245555555543 4432222334444555
Q ss_pred EEEccCC
Q 041689 196 KLDLGGN 202 (652)
Q Consensus 196 ~L~L~~N 202 (652)
+|+|+++
T Consensus 143 ~L~L~~c 149 (176)
T 3e4g_A 143 YLFLSDL 149 (176)
T ss_dssp EEEEESC
T ss_pred EEECCCC
Confidence 5555444
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.62 E-value=0.00027 Score=71.92 Aligned_cols=139 Identities=11% Similarity=0.055 Sum_probs=74.3
Q ss_pred ceeccccceE-EEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCC--CeeeeEEeeeecCCceEEEEEccCCCC
Q 041689 431 NLIGKGGFGT-IYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHY--RNLVKIISSCSNEEFKELVLEHMPHGS 507 (652)
Q Consensus 431 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~g~ 507 (652)
+.++.|.... +|+....+|..+++|...... ...+..|+++++.+.. -.+++++.+....+ +++||++++..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4566665554 667765447788888654321 1345667777777742 23556666643333 78999997766
Q ss_pred hhhhhhcCC-------------------------CCCCHHHHH-------H-H------------HHHHHHHHHHHH---
Q 041689 508 LEKCLYSSN-------------------------CILDIFQRL-------N-I------------MIDVASVLEYLH--- 539 (652)
Q Consensus 508 L~~~l~~~~-------------------------~~l~~~~~~-------~-i------------~~~i~~~L~~LH--- 539 (652)
+.+.+.... ..++..... . + ...+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 643332110 011111100 0 0 001111222221
Q ss_pred cCCCCCeEecCCCCCCeeeCCC----CcEEEecccCCcc
Q 041689 540 FNFLVPVIHCDLKPSNVLLDDT----MVAHLSDFGITKL 574 (652)
Q Consensus 540 ~~~~~~iiH~dlkp~NIll~~~----~~~kl~Dfg~~~~ 574 (652)
......++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1123489999999999999874 6899999998874
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.60 E-value=8.3e-05 Score=64.17 Aligned_cols=52 Identities=23% Similarity=0.324 Sum_probs=45.1
Q ss_pred CCCcCCc--cCCCCCCCCCCCEEECCCCcCcccCCccccCCCCCCEEEcCCCcCe
Q 041689 14 DDIESPC--EIPSEINPHNLEELLLGQNNLVGVVPAAIFDVSTLKDLALQDNYLS 66 (652)
Q Consensus 14 ~~~~~~~--~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 66 (652)
|..+.++ ++|..+ +.+|++|+|++|+|+.+.++.|..+++|+.|+|++|.+.
T Consensus 15 Cs~~~L~~~~vP~~l-p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 15 CGRRGLTWASLPTAF-PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp CCSSCCCTTTSCSCC-CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred eCCCCCccccCCCCC-CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3344444 799988 889999999999999988899999999999999999875
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.51 E-value=0.00025 Score=71.09 Aligned_cols=72 Identities=4% Similarity=-0.016 Sum_probs=46.6
Q ss_pred ccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCee-eeEEeeeecCCceEEEEEcc-CCC
Q 041689 429 ENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNL-VKIISSCSNEEFKELVLEHM-PHG 506 (652)
Q Consensus 429 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~~g 506 (652)
..+.|+.|....+|++ ..+++|+...... ......+|..+++.+....+ .+++++. .+..++++||+ +|.
T Consensus 22 ~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 22 GPLERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQ 93 (301)
T ss_dssp SCEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCE
T ss_pred ceeEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCc
Confidence 3678999999999998 5689998765422 12334678888877742222 4566543 33356899999 665
Q ss_pred Ch
Q 041689 507 SL 508 (652)
Q Consensus 507 ~L 508 (652)
++
T Consensus 94 ~l 95 (301)
T 3dxq_A 94 TM 95 (301)
T ss_dssp EC
T ss_pred cC
Confidence 44
No 435
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.50 E-value=0.00027 Score=72.97 Aligned_cols=139 Identities=12% Similarity=0.113 Sum_probs=83.0
Q ss_pred ceeccccceEEEEEEeC--------CCcEEEEEEeecccchhhhhHHHHHHHHHhcC-CCeeeeEEeeeecCCceEEEEE
Q 041689 431 NLIGKGGFGTIYKSRIG--------DGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH-YRNLVKIISSCSNEEFKELVLE 501 (652)
Q Consensus 431 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 501 (652)
+.+..|-...+|++... +++.|++|+.... ........+|.++++.+. +.-.+++++.+.. .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 56777888999999864 2578999986332 123455678999998884 3334667776654 28999
Q ss_pred ccCCCChhhh-----------------hhcCC----CCCC--HHHHHHHHHHHHH-------------------HHHHHH
Q 041689 502 HMPHGSLEKC-----------------LYSSN----CILD--IFQRLNIMIDVAS-------------------VLEYLH 539 (652)
Q Consensus 502 ~~~~g~L~~~-----------------l~~~~----~~l~--~~~~~~i~~~i~~-------------------~L~~LH 539 (652)
|++|.++..- ++... .... +.++.++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998655311 01111 0112 2344444443321 223332
Q ss_pred ----cC-CCCCeEecCCCCCCeeeCCC----CcEEEecccCCcc
Q 041689 540 ----FN-FLVPVIHCDLKPSNVLLDDT----MVAHLSDFGITKL 574 (652)
Q Consensus 540 ----~~-~~~~iiH~dlkp~NIll~~~----~~~kl~Dfg~~~~ 574 (652)
.. ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 21 23479999999999999876 7899999998874
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.49 E-value=0.00013 Score=62.93 Aligned_cols=56 Identities=14% Similarity=0.147 Sum_probs=43.7
Q ss_pred cEEEcccCCCc--ccCCccchhcccccCcEEEccCCcccccCCccccCCCCCCEEEecCcccc
Q 041689 97 VVFLLSNNPLN--GILPRMSIGNLSHSLEIFDMSKCNVSGGIPEEIGNLTNLTAIYLGGNKLN 157 (652)
Q Consensus 97 ~~L~Ls~N~l~--~~~~~~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 157 (652)
..++.+++.|+ .++.. +|.+|+.|+|++|+|+.+.++.|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~-----lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTA-----FPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSC-----CCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCC-----CCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47888888887 55432 4556888888888888877788888888888888888775
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.44 E-value=4.8e-05 Score=70.21 Aligned_cols=17 Identities=12% Similarity=0.089 Sum_probs=9.4
Q ss_pred CCCCCCcEEEcccC-CCc
Q 041689 91 SNCKSLVVFLLSNN-PLN 107 (652)
Q Consensus 91 ~~l~~L~~L~Ls~N-~l~ 107 (652)
.+-+.|+.|+|++| +|.
T Consensus 38 ~~n~~L~~L~L~~nn~ig 55 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVS 55 (197)
T ss_dssp TTCSSCCEEECTTCCSSC
T ss_pred hcCCCccEEECCCCCCCC
Confidence 34455666666654 554
No 438
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.44 E-value=0.0007 Score=68.57 Aligned_cols=158 Identities=10% Similarity=0.098 Sum_probs=88.9
Q ss_pred ccccHHHHHHHhcCCC-----ccceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCC--eeee
Q 041689 413 RRFSYLEVCRATYGFN-----ENNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYR--NLVK 485 (652)
Q Consensus 413 ~~~~~~~~~~~~~~y~-----~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~ 485 (652)
...+.+++...-..|. ....++ |....||++...+|+.+++|+..... .....+..|..+++.+... .+++
T Consensus 9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~ 86 (328)
T 1zyl_A 9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAA 86 (328)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecc
Confidence 3444444444433332 224566 77889999877678789999986431 1235667788888877422 2444
Q ss_pred EEee-----eecCCceEEEEEccCCCChh-----hh---------hh----cC----CCCCCHHHH----HHH-------
Q 041689 486 IISS-----CSNEEFKELVLEHMPHGSLE-----KC---------LY----SS----NCILDIFQR----LNI------- 527 (652)
Q Consensus 486 ~~~~-----~~~~~~~~lv~e~~~~g~L~-----~~---------l~----~~----~~~l~~~~~----~~i------- 527 (652)
++.. ....+..+++|||++|..+. .+ ++ .. ...++.... ..+
T Consensus 87 ~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (328)
T 1zyl_A 87 PVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLI 166 (328)
T ss_dssp CCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSS
T ss_pred eeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcC
Confidence 4443 12245667899999885432 10 10 00 001222110 001
Q ss_pred --------HHHHHHHHHHHHcC----CCCCeEecCCCCCCeeeCCCCcEEEecccCCcc
Q 041689 528 --------MIDVASVLEYLHFN----FLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKL 574 (652)
Q Consensus 528 --------~~~i~~~L~~LH~~----~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~ 574 (652)
...+...++.+... ....++|+|+++.||+++ + .+.++||+.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 167 PSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 01111222333211 234789999999999999 4 899999988764
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.39 E-value=0.00037 Score=73.54 Aligned_cols=73 Identities=16% Similarity=0.137 Sum_probs=49.7
Q ss_pred cceeccccceEEEEEEeCC--------CcEEEEEEeecccchhhhhHHHHHHHHHhcC-CCeeeeEEeeeecCCceEEEE
Q 041689 430 NNLIGKGGFGTIYKSRIGD--------GMEVAVKVFHLQCGRAFKSFDIECEIMKSIH-YRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 430 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 500 (652)
.+.|+.|....+|++...+ +..|++|+..... ....+..|..+++.+. +.-.+++++.+.. .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3578888889999998653 5789999884321 1144557999888884 3223567766543 2899
Q ss_pred EccCCCCh
Q 041689 501 EHMPHGSL 508 (652)
Q Consensus 501 e~~~~g~L 508 (652)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987443
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.39 E-value=5.4e-05 Score=69.89 Aligned_cols=107 Identities=13% Similarity=0.199 Sum_probs=81.1
Q ss_pred cCcEEEccCC-ccccc----CCccccCCCCCCEEEecCcccccc----CCccccCCCCCcEEecccCcccccc----Ccc
Q 041689 121 SLEIFDMSKC-NVSGG----IPEEIGNLTNLTAIYLGGNKLNGS----IPFTLRELQKLQYVGLKDNKLEGTI----PYD 187 (652)
Q Consensus 121 ~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~----~~~ 187 (652)
+|++|+|++| +|... +.+++..-+.|+.|+|++|+|... +..++..-+.|++|+|++|.|+..- ...
T Consensus 42 ~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~a 121 (197)
T 1pgv_A 42 DLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRS 121 (197)
T ss_dssp SCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHH
T ss_pred CccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHH
Confidence 4999999996 88632 456677788999999999999733 3344567789999999999998543 335
Q ss_pred ccCCCCCcEEEccCC---cccc----cccccCCCCCCCCEEEccCCC
Q 041689 188 IFRLVKLYKLDLGGN---KLSG----SILTCFSNLASLRTLSLSYND 227 (652)
Q Consensus 188 ~~~l~~L~~L~L~~N---~l~~----~~~~~~~~l~~L~~L~Ls~N~ 227 (652)
+..-+.|+.|+|++| .+.. .+..++..-+.|+.|+++.|.
T Consensus 122 L~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 122 TLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp TTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 556678999999876 4442 234456677899999999885
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.36 E-value=0.0008 Score=71.33 Aligned_cols=74 Identities=16% Similarity=0.119 Sum_probs=49.2
Q ss_pred cceeccccceEEEEEEeCC-CcEEEEEEeecccchhhhhHHHHHHHHHhcCCCee-eeEEeeeecCCceEEEEEccCCCC
Q 041689 430 NNLIGKGGFGTIYKSRIGD-GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNL-VKIISSCSNEEFKELVLEHMPHGS 507 (652)
Q Consensus 430 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~g~ 507 (652)
.+.|+.|-...+|++...+ +..|++|+...... ...+..+|..+++.+...++ +++++.+.. ..||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence 3578888889999998765 57899998754322 12233689999998864444 577777632 25999999854
Q ss_pred h
Q 041689 508 L 508 (652)
Q Consensus 508 L 508 (652)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.19 E-value=0.00078 Score=69.58 Aligned_cols=73 Identities=11% Similarity=0.163 Sum_probs=45.4
Q ss_pred ceeccccceEEEEEEeCC---------CcEEEEEEeecccchhhhhHHHHHHHHHhcCCCe-eeeEEeeeecCCceEEEE
Q 041689 431 NLIGKGGFGTIYKSRIGD---------GMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRN-LVKIISSCSNEEFKELVL 500 (652)
Q Consensus 431 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~ 500 (652)
+.++.|....+|++...+ +..|++|+...... .......|.++++.+...+ ++++++... -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 567788888999998653 26889998754322 2223467888888874223 456665542 36899
Q ss_pred EccCCCCh
Q 041689 501 EHMPHGSL 508 (652)
Q Consensus 501 e~~~~g~L 508 (652)
||++|.++
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99998543
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=97.17 E-value=0.00096 Score=67.98 Aligned_cols=64 Identities=13% Similarity=0.135 Sum_probs=42.6
Q ss_pred ceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcC---CCeeeeEEee------eecCCceEEEEEccCCCCh
Q 041689 438 FGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIH---YRNLVKIISS------CSNEEFKELVLEHMPHGSL 508 (652)
Q Consensus 438 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~------~~~~~~~~lv~e~~~~g~L 508 (652)
...||+....+| .+++|+...... ..|..+++.+. -|.+++++.. ....+..++||+|++|..+
T Consensus 36 ~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G~~~ 108 (339)
T 3i1a_A 36 NAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNG 108 (339)
T ss_dssp SCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCCCBT
T ss_pred ccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCCCcC
Confidence 679999987667 999998765431 35666666553 2324555432 2335677899999998765
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.95 E-value=0.0031 Score=65.28 Aligned_cols=140 Identities=15% Similarity=0.131 Sum_probs=83.4
Q ss_pred ceeccccceEEEEEEeCC--------CcEEEEEEeecccch-----------h-------hhhHHHHHHHHHhcC-CCee
Q 041689 431 NLIGKGGFGTIYKSRIGD--------GMEVAVKVFHLQCGR-----------A-------FKSFDIECEIMKSIH-YRNL 483 (652)
Q Consensus 431 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-----------~-------~~~~~~E~~~l~~l~-h~ni 483 (652)
+.|..|-...+|++...+ +..|.+++.-..... . .+....|.++++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 567778888999988653 367899887543211 0 112234888888874 4445
Q ss_pred eeEEeeeecCCceEEEEEccCCCChhh--h---------------hhcCC----CCCC--HHHHHHHHHHHH--------
Q 041689 484 VKIISSCSNEEFKELVLEHMPHGSLEK--C---------------LYSSN----CILD--IFQRLNIMIDVA-------- 532 (652)
Q Consensus 484 v~~~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~~----~~l~--~~~~~~i~~~i~-------- 532 (652)
.++++++..+ +|+||++|.+|.. + ++... .... +....++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 6777776532 8999999755421 1 01111 1122 223333333221
Q ss_pred --------------HHHH----HHHcC-CCCCeEecCCCCCCeeeCCC------CcEEEecccCCcc
Q 041689 533 --------------SVLE----YLHFN-FLVPVIHCDLKPSNVLLDDT------MVAHLSDFGITKL 574 (652)
Q Consensus 533 --------------~~L~----~LH~~-~~~~iiH~dlkp~NIll~~~------~~~kl~Dfg~~~~ 574 (652)
.-+. ++... ....++|+|+.+.||+++++ +.+.++||..+..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 23221 23479999999999999876 7899999998864
No 445
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.83 E-value=0.0019 Score=59.87 Aligned_cols=117 Identities=13% Similarity=0.014 Sum_probs=78.7
Q ss_pred ChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCccccCCCCcccccc
Q 041689 507 SLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITKLLIGEDQSMTQTQ 586 (652)
Q Consensus 507 ~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 586 (652)
+|.+.+...+.++++.+++.++.|.+.+|.-+-....+ ..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc-------------
Confidence 88999988888999999999999999998876221111 1233456888888888887664 1111
Q ss_pred ccCCccccCccccccCccCcccchhhHHHHHHHHHhCCCC------cchhhhhhhcccchh
Q 041689 587 TLATIGYIAPEYGREGRVFANGDVYSFGIMLMEIHSAKQQ------CVSFVFNLAMECTIE 641 (652)
Q Consensus 587 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p------~~~~l~~l~~~~l~~ 641 (652)
.....+.|||... ...+.+.=|||+|+++|.-+-=..| .++.+.+++..|...
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~eE~eLS~~LE~LL~~Mt~~ 156 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENEERELSPPLEQLIDHMANT 156 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTEEECCCHHHHHHHHHHTTC
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcccchhhCHHHHHHHHHHHhc
Confidence 1122466888753 3456778999999999998864444 666788888888755
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.51 E-value=0.0065 Score=63.49 Aligned_cols=74 Identities=12% Similarity=0.177 Sum_probs=49.9
Q ss_pred cceeccccceEEEEEEeCC--------CcEEEEEEeecccchhhhhHHHHHHHHHhcC-CCeeeeEEeeeecCCceEEEE
Q 041689 430 NNLIGKGGFGTIYKSRIGD--------GMEVAVKVFHLQCGRAFKSFDIECEIMKSIH-YRNLVKIISSCSNEEFKELVL 500 (652)
Q Consensus 430 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 500 (652)
.+.+..|-...+|++...+ +..|++|+..... ....+..+|.++++.+. +.-.+++++.+. -+.||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 3567778888999998653 5789999865432 22234567888888874 333456665432 26899
Q ss_pred EccCCCCh
Q 041689 501 EHMPHGSL 508 (652)
Q Consensus 501 e~~~~g~L 508 (652)
||++|.++
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998654
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.07 E-value=0.068 Score=55.50 Aligned_cols=30 Identities=27% Similarity=0.368 Sum_probs=25.8
Q ss_pred CeEecCCCCCCeee------CCCCcEEEecccCCcc
Q 041689 545 PVIHCDLKPSNVLL------DDTMVAHLSDFGITKL 574 (652)
Q Consensus 545 ~iiH~dlkp~NIll------~~~~~~kl~Dfg~~~~ 574 (652)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46899999999999 4567899999999874
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=88.08 E-value=1.3 Score=40.98 Aligned_cols=116 Identities=9% Similarity=0.160 Sum_probs=77.4
Q ss_pred CCCeeeeEEeeeecCCceEEEEEccCC-CChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCee
Q 041689 479 HYRNLVKIISSCSNEEFKELVLEHMPH-GSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNVL 557 (652)
Q Consensus 479 ~h~niv~~~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NIl 557 (652)
.||+.+.. .+-.+.+.+.+.++.-+. -++.. ++ ..+...+++++.+|+...++++.. +|--+.|+||+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik----~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK----SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG----GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH----hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEE
Confidence 57888765 455556655555554332 23333 22 367889999999999888766644 68899999999
Q ss_pred eCCCCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchh-hHHHHHHHHHhCCCCcchh
Q 041689 558 LDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVY-SFGIMLMEIHSAKQQCVSF 630 (652)
Q Consensus 558 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvw-slG~vl~elltg~~p~~~~ 630 (652)
++.++.+++.-.|+...+ +|.- .+ ..|.| .+=|++..+++++..|++-
T Consensus 112 f~~~~~p~i~~RGik~~l-------------------~P~~-----~~-ee~fL~qyKAliiall~~K~~Fe~l 160 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVV-------------------DPLP-----VS-EAEFLTRYKALVICAFNEKQSFDAL 160 (215)
T ss_dssp ECTTSCEEESCCEETTTB-------------------SCCC-----CC-HHHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred EcCCCCEEEEEccCccCC-------------------CCCC-----CC-HHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 999999999988865432 2211 11 12333 4667888888888876553
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.06 E-value=2.7 Score=38.87 Aligned_cols=115 Identities=9% Similarity=0.150 Sum_probs=76.3
Q ss_pred CCCeeeeEEeeeecCCceEEEEEccCCC-ChhhhhhcCCCCCCHHHHHHHHHHHHHHHH-HHHcCCCCCeEecCCCCCCe
Q 041689 479 HYRNLVKIISSCSNEEFKELVLEHMPHG-SLEKCLYSSNCILDIFQRLNIMIDVASVLE-YLHFNFLVPVIHCDLKPSNV 556 (652)
Q Consensus 479 ~h~niv~~~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~-~LH~~~~~~iiH~dlkp~NI 556 (652)
.||++ -...-.+++.+.+.++.-+++ +.. .++ ..+..++++++.+++.... +++. -+|--+.|+||
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i~----~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AIR----KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HHH----TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HHH----hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceE
Confidence 57887 344446667776666655343 333 333 3678889999998888776 5553 47888999999
Q ss_pred eeCCCCcEEEecccCCccccCCCCccccccccCCccccCccccccCccCcccchh-hHHHHHHHHHhCCCCcchh
Q 041689 557 LLDDTMVAHLSDFGITKLLIGEDQSMTQTQTLATIGYIAPEYGREGRVFANGDVY-SFGIMLMEIHSAKQQCVSF 630 (652)
Q Consensus 557 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvw-slG~vl~elltg~~p~~~~ 630 (652)
++|.++.+++.-.|+-..+ +|.-+. ..|.| .+=|++..++.++..|++-
T Consensus 116 ~f~~~~~p~i~hRGi~~~l-------------------pP~e~~------ee~fl~qyKali~all~~K~~Fe~l 165 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKESL-------------------PPDEWD------DERLLREVKATVLALTEGEYRFDEY 165 (219)
T ss_dssp EECTTCCEEESCCEETTTB-------------------SSCSCC------HHHHHHHHHHHHHHHTTCSSCHHHH
T ss_pred EEeCCCcEEEEEcCCcccC-------------------CCCCCC------HHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999999988865422 232111 12333 4667777777777776654
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=81.37 E-value=1.8 Score=28.60 Aligned_cols=17 Identities=18% Similarity=0.354 Sum_probs=7.2
Q ss_pred chhhhhhHhhhhhhhhh
Q 041689 369 ALFLGIVLSFSTIFMVV 385 (652)
Q Consensus 369 ~~~~~~v~~~~~~~~~~ 385 (652)
.+.+|++.+++++++++
T Consensus 12 ~IA~gVVgGv~~~~ii~ 28 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVA 28 (44)
T ss_dssp SSTHHHHHHHHHHHHHH
T ss_pred eEEeehhHHHHHHHHHH
Confidence 34444444444443333
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=76.45 E-value=0.3 Score=51.62 Aligned_cols=59 Identities=12% Similarity=0.053 Sum_probs=16.7
Q ss_pred ccceeccccceEEEEEEeCC-CcEEEE------EEeeccc--chhhhhHHHHHHHHHhcCCCeeeeEEeee
Q 041689 429 ENNLIGKGGFGTIYKSRIGD-GMEVAV------KVFHLQC--GRAFKSFDIECEIMKSIHYRNLVKIISSC 490 (652)
Q Consensus 429 ~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 490 (652)
..+.+| ||.||+|.+.. ..+||+ |..+... ......+.+|..+++..+|||+++.+++.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 345666 99999998753 467888 7665432 22334677899999999999999988765
No 452
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=70.42 E-value=4.4 Score=26.68 Aligned_cols=12 Identities=8% Similarity=0.191 Sum_probs=4.6
Q ss_pred hhhhhHhhhhhh
Q 041689 371 FLGIVLSFSTIF 382 (652)
Q Consensus 371 ~~~~v~~~~~~~ 382 (652)
.+|++.++++++
T Consensus 13 A~gVVgGv~~v~ 24 (44)
T 2l2t_A 13 AAGVIGGLFILV 24 (44)
T ss_dssp HHHHHHHHHHHH
T ss_pred EEeehHHHHHHH
Confidence 333333344433
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=65.12 E-value=12 Score=29.76 Aligned_cols=48 Identities=15% Similarity=-0.024 Sum_probs=31.5
Q ss_pred CcccccCCccccCCCCCCEEEecCccccccCCccccCCCCCcEEecccC
Q 041689 130 CNVSGGIPEEIGNLTNLTAIYLGGNKLNGSIPFTLRELQKLQYVGLKDN 178 (652)
Q Consensus 130 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 178 (652)
..++.+-..+|.+|++|+.+.+-.+ ++.+-..+|.++.+|+.+.+...
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 3455566667777777777777665 44466667777777777776653
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=61.25 E-value=6.8 Score=25.72 Aligned_cols=10 Identities=10% Similarity=0.285 Sum_probs=4.7
Q ss_pred chhhhhhHhh
Q 041689 369 ALFLGIVLSF 378 (652)
Q Consensus 369 ~~~~~~v~~~ 378 (652)
..+++.++++
T Consensus 12 ~~Ia~~vVGv 21 (44)
T 2jwa_A 12 TSIISAVVGI 21 (44)
T ss_dssp HHHHHHHHHH
T ss_pred cchHHHHHHH
Confidence 3345555553
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=60.42 E-value=20 Score=28.37 Aligned_cols=45 Identities=7% Similarity=-0.003 Sum_probs=21.5
Q ss_pred CCccCcccccCCCCCcEEEccCCcCCCcccccccccccCcceeccc
Q 041689 250 FSSVIPTTIGSLKDLQYLFLGYNILKGSIPDSVGDLISLKSLNFSN 295 (652)
Q Consensus 250 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 295 (652)
++.+...+|.++.+|+.+.+-.+ ++.+-..+|.++.+|+.+.+.+
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33444445555555555555443 2224444555555555555443
No 456
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=57.04 E-value=6.3 Score=25.41 Aligned_cols=10 Identities=10% Similarity=0.215 Sum_probs=3.9
Q ss_pred hhhhhHhhhh
Q 041689 371 FLGIVLSFST 380 (652)
Q Consensus 371 ~~~~v~~~~~ 380 (652)
.++++.++..
T Consensus 16 ~~~vv~Gv~l 25 (41)
T 2k9y_A 16 IGGVAVGVVL 25 (41)
T ss_dssp HHHHHHHHHH
T ss_pred EeehhHHHHH
Confidence 3343333333
No 457
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=50.51 E-value=2.8e+02 Score=30.27 Aligned_cols=44 Identities=25% Similarity=0.174 Sum_probs=32.7
Q ss_pred HHHHHHHHHH--HHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCc
Q 041689 523 QRLNIMIDVA--SVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITK 573 (652)
Q Consensus 523 ~~~~i~~~i~--~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~ 573 (652)
.+..++..+| ..+.|+=.- +|=.++||||+..|++.=+|||.+-
T Consensus 530 ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 530 VMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 3445555554 345566533 7888999999999999999999874
No 458
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=47.46 E-value=73 Score=31.34 Aligned_cols=136 Identities=16% Similarity=0.059 Sum_probs=68.5
Q ss_pred cceeccccceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHHhcCCCeeeeEEee--------------------
Q 041689 430 NNLIGKGGFGTIYKSRIGDGMEVAVKVFHLQCGRAFKSFDIECEIMKSIHYRNLVKIISS-------------------- 489 (652)
Q Consensus 430 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~-------------------- 489 (652)
.+....|.. .||.+.. ++..|+||... ....+.+-.++...-.+.-|+..-+.-.
T Consensus 74 I~~s~~Gst-gvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~ 148 (342)
T 1cja_A 74 IERSEKGTE-GLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRV 148 (342)
T ss_dssp EEECCSTTS-CEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCH
T ss_pred EEeccCCCC-CeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHH
Confidence 344455654 4555544 57789999441 1122333333333334455553222211
Q ss_pred --eecCCceEEEEEccCCCChhhhhhcC-CCCCCHHHHHHHHHHH--HHHHHHHHcCCCC-C-eEecCCCCCCeeeCCCC
Q 041689 490 --CSNEEFKELVLEHMPHGSLEKCLYSS-NCILDIFQRLNIMIDV--ASVLEYLHFNFLV-P-VIHCDLKPSNVLLDDTM 562 (652)
Q Consensus 490 --~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i--~~~L~~LH~~~~~-~-iiH~dlkp~NIll~~~~ 562 (652)
....+...++|||.+|..|.+.-... ...+... ...++ +-++.....+... + +.+.--.++|||+++++
T Consensus 149 l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n 224 (342)
T 1cja_A 149 ITTLANQANILLMELVRGITLNKLTTTSAPEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERG 224 (342)
T ss_dssp HHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBT
T ss_pred HHHhhcccceehhhhcCCCccccchhhhhhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCC
Confidence 00122466999999986665431110 0012222 23332 3345555544331 1 11223578999997654
Q ss_pred -cEEEecccCCcc
Q 041689 563 -VAHLSDFGITKL 574 (652)
Q Consensus 563 -~~kl~Dfg~~~~ 574 (652)
.+.++|-+.+..
T Consensus 225 ~~~~~IDhn~af~ 237 (342)
T 1cja_A 225 ATVVPIDSKIIPL 237 (342)
T ss_dssp TCEEECSCCCCCC
T ss_pred CeEEEEcCCcccc
Confidence 499999999864
No 459
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=46.91 E-value=16 Score=23.15 Aligned_cols=11 Identities=0% Similarity=0.365 Sum_probs=6.2
Q ss_pred cchhhhhhHhh
Q 041689 368 NALFLGIVLSF 378 (652)
Q Consensus 368 ~~~~~~~v~~~ 378 (652)
...++|++++.
T Consensus 10 ~GaIAGiVvG~ 20 (38)
T 2k1k_A 10 GGEIVAVIFGL 20 (38)
T ss_dssp HHHHHHHHHHH
T ss_pred CCceeeeehHH
Confidence 44556666654
No 460
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=38.71 E-value=22 Score=23.33 Aligned_cols=28 Identities=7% Similarity=0.108 Sum_probs=12.4
Q ss_pred cchhhhhhHhhhhhhhhhhhhhhhhhcc
Q 041689 368 NALFLGIVLSFSTIFMVVVILLIVKYQK 395 (652)
Q Consensus 368 ~~~~~~~v~~~~~~~~~~~~~~~~~~~k 395 (652)
...++|.++.++.+++++.+++.+|+++
T Consensus 14 A~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 14 ATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred EeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 4444444444444444454444444333
No 461
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=37.10 E-value=4.2e+02 Score=28.40 Aligned_cols=45 Identities=24% Similarity=0.144 Sum_probs=33.1
Q ss_pred HHHHHHHHHHH--HHHHHHHcCCCCCeEecCCCCCCeeeCCCCcEEEecccCCc
Q 041689 522 FQRLNIMIDVA--SVLEYLHFNFLVPVIHCDLKPSNVLLDDTMVAHLSDFGITK 573 (652)
Q Consensus 522 ~~~~~i~~~i~--~~L~~LH~~~~~~iiH~dlkp~NIll~~~~~~kl~Dfg~~~ 573 (652)
..+..++..+| ..+.|+=.- +|=.++|||++.+|++.=+|||.+-
T Consensus 455 ~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 455 EVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 34455555554 346666633 5778999999999999999999874
No 462
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=20.67 E-value=53 Score=23.52 Aligned_cols=19 Identities=11% Similarity=0.086 Sum_probs=9.4
Q ss_pred hhhhHhhhhhhhhhhhhhh
Q 041689 372 LGIVLSFSTIFMVVVILLI 390 (652)
Q Consensus 372 ~~~v~~~~~~~~~~~~~~~ 390 (652)
.|++++++.+++.+++++.
T Consensus 20 gGLifA~vLfi~GI~iilS 38 (67)
T 2jp3_A 20 GGLIFGGLLCIAGIALALS 38 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred cchhhHHHHHHHHHHHHHc
Confidence 5555555555444444443
No 463
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=20.18 E-value=5.8e+02 Score=26.76 Aligned_cols=135 Identities=10% Similarity=0.004 Sum_probs=86.1
Q ss_pred eeccccceEEEEEEeCCCcEEEEEEeeccc----chhhhhHHHHHHHHHhcCCCeeeeEEeeee----------------
Q 041689 432 LIGKGGFGTIYKSRIGDGMEVAVKVFHLQC----GRAFKSFDIECEIMKSIHYRNLVKIISSCS---------------- 491 (652)
Q Consensus 432 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~---------------- 491 (652)
.+.-|--|.|-.+..--+-+++.|+++..- ....+..+...++.+ +|..+-++.+..+
T Consensus 313 i~APGikGmVM~VFTLPSf~~VFKvIKD~F~p~K~~tr~~Vk~KY~LVK--~hDRVGRMADT~Efsn~~fp~~Rfs~eLL 390 (578)
T 3eps_A 313 IEAPGIRGMVMLVFTLPGFDRVFKVIKDKFAPQKEMSAAHVRACYQLVK--EHDRVGRMADTQEFENFVLEKRHISPALM 390 (578)
T ss_dssp EECSSCCCSSEEEEECTTCSEEEEEECSSCCTTCCCCHHHHHHHHHHHH--TSCCTTTBCCCEEEEEEEEEGGGBCHHHH
T ss_pred EECCCCCceEEEEEcCCCCceEEEEEccCCCCccccCHHHHHHHHHHHH--hhhhhhhhhhhhhhhcccCchhhCCHHHH
Confidence 367788888888865557789999997541 112233333333333 3444433332211
Q ss_pred -------------cCCceEEEEEccC--CCChhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecCCCCCCe
Q 041689 492 -------------NEEFKELVLEHMP--HGSLEKCLYSSNCILDIFQRLNIMIDVASVLEYLHFNFLVPVIHCDLKPSNV 556 (652)
Q Consensus 492 -------------~~~~~~lv~e~~~--~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~dlkp~NI 556 (652)
+++...|=.=|++ ...|.-++.+. +..++...+.+--.|++.|-.. +|.-||.=-.|+
T Consensus 391 ~EL~~~~ps~le~~gd~liIkHlYiERRMtPLNLYL~~a----~~~~~~~av~eYG~AIKqLAaA---NIFPGDML~KNF 463 (578)
T 3eps_A 391 ELLLQEAAEKITDLGEQIVIRHLYIERRMVPLNIWLEQV----EGQQLRDAIEEYGNAIRQLAAA---NIFPGDMLFKNF 463 (578)
T ss_dssp HHHHHHSGGGEEEETTEEEEEEEEEEECCEEHHHHHHHC----CTHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGE
T ss_pred HHHHHhCCccEEEcCCeeEeeeeeeeccccchhHHHhhC----CHHHHHHHHHHHHHHHHHHHHh---cCCCcccccccC
Confidence 1222221111111 22455555543 4456777888899999999999 999999999999
Q ss_pred eeCCCCcEEEecccCCccc
Q 041689 557 LLDDTMVAHLSDFGITKLL 575 (652)
Q Consensus 557 ll~~~~~~kl~Dfg~~~~~ 575 (652)
=++..|+|..-|+.-...+
T Consensus 464 GVTRhgRVVFYDYDEI~yl 482 (578)
T 3eps_A 464 GVTRHGRVVFYDYDEICYM 482 (578)
T ss_dssp EECTTCCEEECCGGGCEES
T ss_pred CccccceEEEecccceeee
Confidence 9999999999999877665
Done!