BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041693
(156 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SRX9|BAH1_ARATH E3 ubiquitin-protein ligase BAH1 OS=Arabidopsis thaliana GN=BAH1
PE=1 SV=1
Length = 335
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/163 (60%), Positives = 126/163 (77%), Gaps = 7/163 (4%)
Query: 1 VALHINLGETNVSS-----STAEAISS--EGYRLTFNDDKVSLSCQLFDSIRLDIELTCP 53
+A HINL E+ S S + + +G LTF+D K LSC+L DS+++DI+LTC
Sbjct: 173 MAFHINLKESKKESGATITSPPPPVHALFDGCALTFDDGKPLLSCELSDSVKVDIDLTCS 232
Query: 54 VCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCRKAGVYQGAIHLT 113
+CL+TVFDP+SLTCGHI C MCACSAASV++VDGLK A+ TEKCPLCR+ GVY+GA+HL
Sbjct: 233 ICLDTVFDPISLTCGHIYCYMCACSAASVNVVDGLKTAEATEKCPLCREDGVYKGAVHLD 292
Query: 114 ELGILLSRSCREYWEKRLQIERVERVKQAKEYWENQCRAFMGI 156
EL ILL RSCR+YWE+R + ER ER++QAKEYW+ QCR+F GI
Sbjct: 293 ELNILLKRSCRDYWEERRKTERAERLQQAKEYWDYQCRSFTGI 335
>sp|B8B5U8|BAHL2_ORYSI Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa
subsp. indica GN=OsI_27296 PE=3 SV=1
Length = 321
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 122/156 (78%), Gaps = 2/156 (1%)
Query: 1 VALHINLGETNVSSSTAEAISSEGYRLTFNDDKVSLSCQLFDSIRLDIELTCPVCLETVF 60
+A ++NL + ++ E L F+DDK ++SC LFDS+R+DI LTC +CL+TVF
Sbjct: 168 MAFYMNLRRSKKNNGAMELFGD--CSLVFDDDKPTISCNLFDSMRVDISLTCSICLDTVF 225
Query: 61 DPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCRKAGVYQGAIHLTELGILLS 120
DPV+L+CGHI C +C+CSAASV+IVDGLK A+ KCPLCR+AGV+ A+HL EL +LLS
Sbjct: 226 DPVALSCGHIYCYLCSCSAASVTIVDGLKSAERKSKCPLCRQAGVFPNAVHLDELNMLLS 285
Query: 121 RSCREYWEKRLQIERVERVKQAKEYWENQCRAFMGI 156
SC EYWEKR+Q+ERVERV+ AKE+WE+QCRAF+G+
Sbjct: 286 YSCPEYWEKRIQMERVERVRLAKEHWESQCRAFLGM 321
>sp|Q7XI73|BAHL2_ORYSJ Probable E3 ubiquitin-protein ligase BAH1-like 2 OS=Oryza sativa
subsp. japonica GN=Os07g0673200 PE=2 SV=1
Length = 321
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 122/156 (78%), Gaps = 2/156 (1%)
Query: 1 VALHINLGETNVSSSTAEAISSEGYRLTFNDDKVSLSCQLFDSIRLDIELTCPVCLETVF 60
+A ++NL + ++ E L F+DDK ++SC LFDS+R+DI LTC +CL+TVF
Sbjct: 168 MAFYMNLRRSKKNNGAMELFGD--CSLVFDDDKPTISCNLFDSMRVDISLTCSICLDTVF 225
Query: 61 DPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCRKAGVYQGAIHLTELGILLS 120
DPV+L+CGHI C +C+CSAASV+IVDGLK A+ KCPLCR+AGV+ A+HL EL +LLS
Sbjct: 226 DPVALSCGHIYCYLCSCSAASVTIVDGLKSAERKSKCPLCRQAGVFPNAVHLDELNMLLS 285
Query: 121 RSCREYWEKRLQIERVERVKQAKEYWENQCRAFMGI 156
SC EYWEKR+Q+ERVERV+ AKE+WE+QCRAF+G+
Sbjct: 286 YSCPEYWEKRIQMERVERVRLAKEHWESQCRAFLGM 321
>sp|Q8GW10|BAH1L_ARATH Probable E3 ubiquitin-protein ligase BAH1-like OS=Arabidopsis
thaliana GN=RF178 PE=2 SV=1
Length = 335
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 99/156 (63%), Gaps = 6/156 (3%)
Query: 2 ALHINLGETNVSS--STAEAISSEGYRLTFNDDKVSLSCQLFDSIRLDIELTCPVCLETV 59
A ++N G NV + ++ ++ E N+D+ L L +SI L+ +LTC +CLETV
Sbjct: 183 AFYLNSGLDNVGNFKNSFGRVACE----NLNEDQPVLKLMLPNSIELEYDLTCAICLETV 238
Query: 60 FDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCRKAGVYQGAIHLTELGILL 119
F+P +L CGHI C CACSAASV I G+K A KCP+CR+AGVY A+H+ EL +LL
Sbjct: 239 FNPYALKCGHIFCNSCACSAASVLIFQGIKAAPRHSKCPICREAGVYAEAVHMIELHLLL 298
Query: 120 SRSCREYWEKRLQIERVERVKQAKEYWENQCRAFMG 155
+EYW++R+ ER E VKQ+K +W Q + +G
Sbjct: 299 KTRSKEYWKERMMNERSEMVKQSKMFWNEQTKHMIG 334
>sp|Q7XZZ3|BAHL1_ORYSJ Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa
subsp. japonica GN=Os03g0650900 PE=2 SV=1
Length = 339
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 100/157 (63%), Gaps = 2/157 (1%)
Query: 2 ALHINLGETNVSSSTAEAISS--EGYRLTFNDDKVSLSCQLFDSIRLDIELTCPVCLETV 59
A H+N +++ + + + + + + ++ + ++++ + LTCP+CL+T+
Sbjct: 183 AFHLNCNSSDIDETVGFLKNEFFKNFSCDLTEARPLMTMAISETMKYEYSLTCPICLDTL 242
Query: 60 FDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCRKAGVYQGAIHLTELGILL 119
F+P +L+CGH+ CK CAC AASV I G+K A P KCP+CR GV+ A+H+TEL +L+
Sbjct: 243 FNPYALSCGHLFCKGCACGAASVYIFQGVKSAPPEAKCPVCRSDGVFAHAVHMTELDLLI 302
Query: 120 SRSCREYWEKRLQIERVERVKQAKEYWENQCRAFMGI 156
++YW +RL+ ER E VKQ+KEYW++Q MGI
Sbjct: 303 KTRSKDYWRQRLREERNEMVKQSKEYWDSQAMLSMGI 339
>sp|A2XK56|BAHL1_ORYSI Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa
subsp. indica GN=OsI_12825 PE=3 SV=1
Length = 339
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 100/157 (63%), Gaps = 2/157 (1%)
Query: 2 ALHINLGETNVSSSTAEAISS--EGYRLTFNDDKVSLSCQLFDSIRLDIELTCPVCLETV 59
A H+N +++ + + + + + + ++ + ++++ + LTCP+CL+T+
Sbjct: 183 AFHLNCNSSDIDETVGFLKNEFFKNFSCDLTEARPLMTMAISETMKYEYSLTCPICLDTL 242
Query: 60 FDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCRKAGVYQGAIHLTELGILL 119
F+P +L+CGH+ CK CAC AASV I G+K A P KCP+CR GV+ A+H+TEL +L+
Sbjct: 243 FNPYALSCGHLFCKGCACGAASVYIFQGVKSAPPEAKCPVCRSDGVFAHAVHMTELDLLI 302
Query: 120 SRSCREYWEKRLQIERVERVKQAKEYWENQCRAFMGI 156
++YW +RL+ ER E VKQ+KEYW++Q MGI
Sbjct: 303 KTRSKDYWRQRLREERNEMVKQSKEYWDSQAMLSMGI 339
>sp|Q495X7|TRI60_HUMAN Tripartite motif-containing protein 60 OS=Homo sapiens GN=TRIM60
PE=2 SV=2
Length = 471
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 44 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCRKA 103
+ L E +CP+CLE + DPV++ CGH C+ C SVS D D T CP+CR
Sbjct: 8 VNLQEESSCPICLEYLKDPVTINCGHNFCRSC----LSVSWKD----LDDTFPCPVCRFC 59
Query: 104 GVYQGAIHLTELGILLSRSCREYWEKRLQIERVERVKQAK 143
Y+ +L L + K+LQI R +R +Q +
Sbjct: 60 FPYKSFRRNPQLRNLTEIA------KQLQIRRSKRKRQKE 93
>sp|Q3ZEE5|TRIM5_HYLLA Tripartite motif-containing protein 5 OS=Hylobates lar GN=TRIM5
PE=3 SV=1
Length = 493
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + P+SL CGH C+ C + S+ DG + CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPDGER------SCPVCR 58
>sp|Q8IYM9|TRI22_HUMAN E3 ubiquitin-protein ligase TRIM22 OS=Homo sapiens GN=TRIM22 PE=1
SV=1
Length = 498
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 6/61 (9%)
Query: 43 SIRLDIE--LTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLC 100
S+++DIE +TCP+CLE + +P+SL CGH C+ C + S++ ++ CP+C
Sbjct: 4 SVKVDIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVI----ISRGESSCPVC 59
Query: 101 R 101
+
Sbjct: 60 Q 60
>sp|Q5D7I2|TRIM5_PITPI Tripartite motif-containing protein 5 OS=Pithecia pithecia GN=TRIM5
PE=3 SV=1
Length = 494
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + +P+SL CGH C+ C + S+ L CPLCR
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKKSM-----LHQGERSCPLCR 59
>sp|Q1ACD7|TRIM5_NOMLE Tripartite motif-containing protein 5 OS=Nomascus leucogenys
GN=TRIM5 PE=3 SV=1
Length = 494
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + P+SL CGH C+ C + S+ D + CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPD-----EGERSCPVCR 59
>sp|Q5C8U4|TRIM5_CERPY Tripartite motif-containing protein 5 OS=Cercopithecus pygerythrus
GN=TRIM5 PE=2 SV=1
Length = 515
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 44 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
+ + E+TCP+CLE + +P+SL CGH LC+ C + S++ + CP+CR
Sbjct: 7 VNVKEEVTCPICLELLTEPLSLPCGHSLCQACITANHKESML----YKEEERSCPVCR 60
>sp|Q1ACD6|TRIM5_HYLSY Tripartite motif-containing protein 5 OS=Hylobates syndactylus
GN=TRIM5 PE=3 SV=1
Length = 494
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + P+SL CGH C+ C + S+ D + CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPD-----EGERSCPVCR 59
>sp|Q5D7I0|TRIM5_SAISC Tripartite motif-containing protein 5 OS=Saimiri sciureus GN=TRIM5
PE=3 SV=1
Length = 494
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + +P+SL CGH C+ C + S+ L CPLCR
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESM-----LHQGERSCPLCR 59
>sp|Q5BN31|TRIM5_SAIBB Tripartite motif-containing protein 5 OS=Saimiri boliviensis
boliviensis GN=TRIM5 PE=2 SV=1
Length = 494
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + +P+SL CGH C+ C + S+ L CPLCR
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESM-----LHQGERSCPLCR 59
>sp|Q2YEM8|TRIM5_HOOHO Tripartite motif-containing protein 5 OS=Hoolock hoolock GN=TRIM5
PE=3 SV=1
Length = 494
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + P+SL CGH C+ C + S+ D + CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPD-----EGERSCPVCR 59
>sp|Q5D7H8|TRIM5_CALDO Tripartite motif-containing protein 5 OS=Callicebus donacophilus
GN=TRIM5 PE=3 SV=1
Length = 494
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 44 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
+ + E+TCP+CLE + +P+SL CGH C+ C + S L CPLCR
Sbjct: 7 VNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKEST-----LHQGERSCPLCR 59
>sp|O77666|TRI26_PIG Tripartite motif-containing protein 26 OS=Sus scrofa GN=TRIM26 PE=3
SV=2
Length = 545
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 22/95 (23%)
Query: 46 LDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCRKAGV 105
L+ E+TC +CL+ + DPV++ CGH+ C+ C VS P CPLC+K
Sbjct: 10 LEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSG------GRPV--CPLCKKP-- 59
Query: 106 YQGAIHLTELGILLSRSCREYWEKRLQIERVERVK 140
+ R W+ +E +ER+K
Sbjct: 60 ------------FTKENIRPVWQLASLVENIERLK 82
>sp|Q3UWZ0|TRI75_MOUSE Tripartite motif-containing protein 75 OS=Mus musculus GN=Trim75
PE=2 SV=1
Length = 467
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 45 RLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCRKAG 104
RL E CP+CL+ + DPV++ CGH C+ C I D T CP+CR
Sbjct: 9 RLQKETKCPICLDDLTDPVTVECGHNFCRSC--------IKDFWAGQQATSSCPVCRHQC 60
Query: 105 VYQGAIHLTELGILL 119
++ +LG ++
Sbjct: 61 QHRNLRSNAQLGNMI 75
>sp|Q12899|TRI26_HUMAN Tripartite motif-containing protein 26 OS=Homo sapiens GN=TRIM26
PE=2 SV=1
Length = 539
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 22/95 (23%)
Query: 46 LDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCRKAGV 105
L+ E+TC +CL+ + DPV++ CGH+ C+ C +S + P CPLC+K
Sbjct: 10 LEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISG------SRPV--CPLCKKP-- 59
Query: 106 YQGAIHLTELGILLSRSCREYWEKRLQIERVERVK 140
+ R W+ +E +ER+K
Sbjct: 60 ------------FKKENIRPVWQLASLVENIERLK 82
>sp|Q7YR34|TRI26_PANTR Tripartite motif-containing protein 26 OS=Pan troglodytes GN=TRIM26
PE=3 SV=1
Length = 539
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 22/95 (23%)
Query: 46 LDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCRKAGV 105
L+ E+TC +CL+ + DPV++ CGH+ C+ C +S + P CPLC+K
Sbjct: 10 LEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISG------SRPV--CPLCKKP-- 59
Query: 106 YQGAIHLTELGILLSRSCREYWEKRLQIERVERVK 140
+ R W+ +E +ER+K
Sbjct: 60 ------------FKKENIRPVWQLASLVENIERLK 82
>sp|Q5D7J1|TRIM5_PANTR Tripartite motif-containing protein 5 OS=Pan troglodytes GN=TRIM5
PE=2 SV=1
Length = 493
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + P+SL CGH C+ C + S++D + + CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESS-----CPVCR 59
>sp|Q5D7I3|TRIM5_ERYPA Tripartite motif-containing protein 5 OS=Erythrocebus patas
GN=TRIM5 PE=2 SV=1
Length = 495
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 12 EVTCPICLELLTEPLSLPCGHSFCQACITANHKKSML----YKEEERSCPVCR 60
>sp|Q1ACD8|TRIM5_PANPA Tripartite motif-containing protein 5 OS=Pan paniscus GN=TRIM5 PE=3
SV=1
Length = 493
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + P+SL CGH C+ C + S++D + + CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESS-----CPVCR 59
>sp|Q9C035|TRIM5_HUMAN Tripartite motif-containing protein 5 OS=Homo sapiens GN=TRIM5 PE=1
SV=1
Length = 493
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + P+SL CGH C+ C + S++D + + CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESS-----CPVCR 59
>sp|Q5C8U3|TRIM5_CERTA Tripartite motif-containing protein 5 OS=Cercopithecus tantalus
GN=TRIM5 PE=2 SV=1
Length = 515
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 44 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
+ + E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 7 VNVKEEVTCPICLELLTEPLSLPCGHSFCQACITANHKESML----YKEEERSCPVCR 60
>sp|Q5C8T6|TRIM5_GORGO Tripartite motif-containing protein 5 OS=Gorilla gorilla gorilla
GN=TRIM5 PE=2 SV=1
Length = 493
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + P+SL CGH C+ C + S++D + + CP+CR
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHEKSMLDKGESS-----CPVCR 59
>sp|Q5D7I5|TRIM5_CALPY Tripartite motif-containing protein 5 OS=Callithrix pygmaea
GN=TRIM5 PE=3 SV=1
Length = 494
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 44 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
+ + E+TCP+CLE + +P+SL CGH C+ C + S L CPLCR
Sbjct: 7 VNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKEST-----LHQGERSCPLCR 59
>sp|Q587N7|TRIM5_CHLAE Tripartite motif-containing protein 5 OS=Chlorocebus aethiops
GN=TRIM5 PE=2 SV=1
Length = 515
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 12 EVTCPICLELLTEPLSLPCGHSFCQACITANHKESML----YKEEERSCPVCR 60
>sp|Q5C8T8|TRIM5_PONAB Tripartite motif-containing protein 5 OS=Pongo abelii GN=TRIM5 PE=2
SV=1
Length = 493
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 44 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
+ + E+TCP+CLE + P+SL CGH C+ C + S +D + + CP+CR
Sbjct: 7 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSTLDKGERS-----CPVCR 59
>sp|Q5D7I1|TRIM5_ATEGE Tripartite motif-containing protein 5 OS=Ateles geoffroyi GN=TRIM5
PE=2 SV=1
Length = 547
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + +P+SL CGH C+ C + S L CPLCR
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKEST-----LHQGERSCPLCR 59
>sp|Q2YEM9|TRIM5_PONPY Tripartite motif-containing protein 5 OS=Pongo pygmaeus GN=TRIM5
PE=2 SV=1
Length = 493
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 44 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
+ + E+TCP+CLE + P+SL CGH C+ C + S +D + + CP+CR
Sbjct: 7 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSTLDKGERS-----CPVCR 59
>sp|Q5D7J0|TRIM5_COLGU Tripartite motif-containing protein 5 OS=Colobus guereza GN=TRIM5
PE=3 SV=1
Length = 495
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 44 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
+ + E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 7 VNIKEEVTCPICLELLTEPLSLHCGHSFCQACITANHKKSML----YKEGERSCPVCR 60
>sp|Q8R0K2|TRI31_MOUSE E3 ubiquitin-protein ligase TRIM31 OS=Mus musculus GN=Trim31 PE=1
SV=1
Length = 507
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 20/123 (16%)
Query: 36 LSCQLFDSIRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTE 95
L+CQL + E+TCP+C+E + DPV++ CGH C C S
Sbjct: 6 LACQLQE------EVTCPICMEILQDPVTIDCGHNFCLQCISQVGKTS---------EKI 50
Query: 96 KCPLCRKAGVYQGAIHLTELGILLSRSCREYWEKRLQIE----RVERVKQAKEYWENQCR 151
+CPLC K V + +L L+ + +Q E R +R K+ Y+ Q
Sbjct: 51 QCPLC-KLSVNKNTFRPNKLLASLAEKIQSMDPADIQAEKEDSRCQRHKEKLHYFCEQDG 109
Query: 152 AFM 154
AF+
Sbjct: 110 AFL 112
>sp|Q587N6|TRIM5_MACFA Tripartite motif-containing protein 5 OS=Macaca fascicularis
GN=TRIM5 PE=2 SV=1
Length = 495
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 12 EVTCPICLELLTEPLSLHCGHSFCQACITANHKKSML----YKEGERSCPVCR 60
>sp|Q5D7I9|TRIM5_PYGNE Tripartite motif-containing protein 5 OS=Pygathrix nemaeus GN=TRIM5
PE=3 SV=1
Length = 495
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 44 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
+ + E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 7 VNIKEEVTCPICLELLTEPLSLHCGHSFCQACITANHKKSML----YKEGERSCPVCR 60
>sp|Q2YEN0|TRIM5_MACNE Tripartite motif-containing protein 5 OS=Macaca nemestrina GN=TRIM5
PE=3 SV=1
Length = 495
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 12 EVTCPICLELLTEPLSLHCGHSFCQACITANHKKSML----YKEGERSCPVCR 60
>sp|Q2YEN2|TRIM5_MACAS Tripartite motif-containing protein 5 OS=Macaca assamensis GN=TRIM5
PE=3 SV=1
Length = 497
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 12 EVTCPICLELLTEPLSLHCGHSFCQACITANHKKSML----YKEGERSCPVCR 60
>sp|Q0PF16|TRIM5_MACMU Tripartite motif-containing protein 5 OS=Macaca mulatta GN=TRIM5
PE=1 SV=2
Length = 497
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 12 EVTCPICLELLTEPLSLHCGHSFCQACITANHKKSML----YKEGERSCPVCR 60
>sp|Q99PN3|TRI26_MOUSE Tripartite motif-containing protein 26 OS=Mus musculus GN=Trim26
PE=2 SV=3
Length = 545
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 22/95 (23%)
Query: 46 LDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCRKAGV 105
L+ E+TC +CL+ + DPV++ CGH+ C+ C +S + CPLC+K
Sbjct: 10 LEEEVTCSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPV--------CPLCKKP-- 59
Query: 106 YQGAIHLTELGILLSRSCREYWEKRLQIERVERVK 140
+ R W+ +E +ER+K
Sbjct: 60 ------------FKKENIRPVWQLASLVENIERLK 82
>sp|Q5D7J2|TRIM5_PAPAN Tripartite motif-containing protein 5 OS=Papio anubis GN=TRIM5 PE=3
SV=1
Length = 497
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
E+TCP+CLE + +P+SL CGH C+ C + S++ + CP+CR
Sbjct: 12 EVTCPICLELLTEPLSLPCGHSFCQACITANHRKSML----YKEGERSCPVCR 60
>sp|P62603|TRI26_RAT Tripartite motif-containing protein 26 OS=Rattus norvegicus
GN=Trim26 PE=2 SV=1
Length = 542
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 22/95 (23%)
Query: 46 LDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCRKAGV 105
L+ E+TC +CL+ + DPV++ CGH+ C+ C +S + CPLC+K
Sbjct: 10 LEEEVTCSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPV--------CPLCKKP-- 59
Query: 106 YQGAIHLTELGILLSRSCREYWEKRLQIERVERVK 140
+ R W+ +E +ER+K
Sbjct: 60 ------------FKKENIRPVWQLASLVENIERLK 82
>sp|Q1ACD5|TRIM5_SAGOE Tripartite motif-containing protein 5 OS=Saguinus oedipus GN=TRIM5
PE=3 SV=1
Length = 494
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 11/61 (18%)
Query: 44 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTE---KCPLC 100
+ + E+TCP+CLE + +P+SL CGH C+ C I K + P + CPLC
Sbjct: 7 VNIKEEVTCPICLELLTEPLSLDCGHSFCQAC--------ITANHKESTPHQGERSCPLC 58
Query: 101 R 101
R
Sbjct: 59 R 59
>sp|Q5C8U1|TRIM5_SAGLB Tripartite motif-containing protein 5 OS=Saguinus labiatus GN=TRIM5
PE=2 SV=1
Length = 494
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 11/61 (18%)
Query: 44 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTE---KCPLC 100
+ + E+TCP+CLE + +P+SL CGH C+ C I K + P + CPLC
Sbjct: 7 VNIKEEVTCPICLELLTEPLSLDCGHSFCQAC--------ITANHKESTPHQGERSCPLC 58
Query: 101 R 101
R
Sbjct: 59 R 59
>sp|Q5D7H7|TRIM5_LAGLA Tripartite motif-containing protein 5 OS=Lagothrix lagotricha
GN=TRIM5 PE=3 SV=1
Length = 547
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 44 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
+ + E+TCP+CL+ + +P+SL CGH C+ C + S L CPLCR
Sbjct: 7 VNIKEEVTCPICLDLLTEPLSLDCGHSFCQACITADHKEST-----LHQGERSCPLCR 59
>sp|Q503I2|TRI13_DANRE Tripartite motif-containing 13 OS=Danio rerio GN=trim13 PE=2 SV=1
Length = 404
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 46 LDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLAD--PTEKCPLCRKA 103
L+ +LTCP+C DP L C H CK C I+DG + P KCP CRK
Sbjct: 4 LEEDLTCPICCCLFEDPRVLPCSHSFCKKCL-----EGILDGNRSPTWRPPFKCPTCRKE 58
Query: 104 GVYQGAIHLTELGILLSRSCREYWEKRLQIERVERVKQAK 143
V+ G L ++ S R EK +I + R+ Q +
Sbjct: 59 TVHNGIASLQ-----VNYSLRGIVEKYNRIRVMPRMSQCR 93
>sp|Q8BGE7|TRIM6_MOUSE Tripartite motif-containing protein 6 OS=Mus musculus GN=Trim6 PE=2
SV=1
Length = 488
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 43 SIRLDI--ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLC 100
++ +DI E+TCP+CLE + +P+S+ CGH C++C ++ S+ CP+C
Sbjct: 4 TVLVDIRDEVTCPICLELLTEPLSIDCGHSFCQVCIIGNSNNSVFG----QGGRSSCPVC 59
Query: 101 RKA 103
R +
Sbjct: 60 RTS 62
>sp|Q9BYJ4|TRI34_HUMAN Tripartite motif-containing protein 34 OS=Homo sapiens GN=TRIM34
PE=1 SV=2
Length = 488
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLC 100
E+TCP+CLE + +P+SL CGH LC+ C +VS + + CP+C
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSLCRAC----ITVSNKEAVTSMGGKSSCPVC 59
>sp|Q5D7I6|TRIM5_ALOSA Tripartite motif-containing protein 5 OS=Alouatta sara GN=TRIM5
PE=3 SV=1
Length = 551
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 9/58 (15%)
Query: 44 IRLDIELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCR 101
+ + E+TCP+CLE + +P+SL CGH C+ C + S CPLCR
Sbjct: 7 VNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKESR---------ERSCPLCR 55
>sp|Q9C030|TRIM6_HUMAN Tripartite motif-containing protein 6 OS=Homo sapiens GN=TRIM6 PE=1
SV=1
Length = 488
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 49 ELTCPVCLETVFDPVSLTCGHILCKMCACSAASVSIVDGLKLADPTEKCPLCRKA 103
E+TCP+CLE + +P+S+ CGH C+ C S++ + CP+C+ +
Sbjct: 12 EVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIG----QEGERSCPVCQTS 62
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,576,032
Number of Sequences: 539616
Number of extensions: 1928514
Number of successful extensions: 6021
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 250
Number of HSP's that attempted gapping in prelim test: 5547
Number of HSP's gapped (non-prelim): 685
length of query: 156
length of database: 191,569,459
effective HSP length: 107
effective length of query: 49
effective length of database: 133,830,547
effective search space: 6557696803
effective search space used: 6557696803
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)