BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041695
(301 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From
Royal Palm Tree
Length = 304
Score = 335 bits (860), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 167/302 (55%), Positives = 211/302 (69%), Gaps = 1/302 (0%)
Query: 1 LQVGFYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSN 60
LQ+GFY SC +AE +V+ V + + G+A GL+RMHFHDCFVRGCDASVL+DST++N
Sbjct: 2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61
Query: 61 TAEKDSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPS 120
TAEKD+ NNPSLRGFEVI AK+A+E+ C VSCADI+AFAARDS ++G + Y VPS
Sbjct: 62 TAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPS 121
Query: 121 GRRDGRISLASEALTNLPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSN 180
GRRDG +SLASEA +P P F QL SFANK T +EMVTLSGAH+IG +HC+SF+N
Sbjct: 122 GRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSFTN 181
Query: 181 RLYNFSGTMSQDPSLNPMYAAQLKQQCLQDGTN-PNLVVPMNPGSPSIADTGYYIDILRN 239
RLYNF+ DP+L+P YAA L+ C + T + V ++ +PS+ D YY +
Sbjct: 182 RLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLT 241
Query: 240 RGLFTSDQTLLSDPATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCRV 299
GL TSDQ L+++ ++ V NA W + FA AMVKMGQI VLT + GEIR NC V
Sbjct: 242 LGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSV 301
Query: 300 VN 301
VN
Sbjct: 302 VN 303
>pdb|1SCH|A Chain A, Peanut Peroxidase
pdb|1SCH|B Chain B, Peanut Peroxidase
Length = 294
Score = 265 bits (677), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 190/301 (63%), Gaps = 8/301 (2%)
Query: 1 LQVGFYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSN 60
L FY C +A +K V +V K+ + A L+R+HFHDCFV+GCDASVL+D TS+
Sbjct: 2 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61
Query: 61 TAEKDSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPS 120
T EK + N S+RGFEVID K+ +ES+C G+VSCADI+A AARDSV GG ++V
Sbjct: 62 TGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLL 121
Query: 121 GRRDGRISLASEALTNLPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSN 180
GRRD + S A ++LP P F ++ L +F+NKGFT +E+VTLSGAHTIG++ CT+F
Sbjct: 122 GRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRT 181
Query: 181 RLYNFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNR 240
R+YN + +++P YA L+ C G + NL P + +P+ D YYI++ +
Sbjct: 182 RIYN-------ESNIDPTYAKSLQANCPSVGGDTNL-SPFDVTTPNKFDNAYYINLRNKK 233
Query: 241 GLFTSDQTLLSDPATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCRVV 300
GL SDQ L + +T SQV + + T+F AM+KMG + LT ++G+IR NCR
Sbjct: 234 GLLHSDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKT 293
Query: 301 N 301
N
Sbjct: 294 N 294
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
pdb|1GX2|B Chain B, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
Length = 309
Score = 247 bits (631), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 134/301 (44%), Positives = 180/301 (59%), Gaps = 5/301 (1%)
Query: 5 FYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEK 64
FY NSC + IV+D + + D +AA ++R+HFHDCFV GCDAS+L+D+T+S EK
Sbjct: 7 FYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEK 66
Query: 65 DSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPSGRRD 124
D+ N S RGF VID KAA+ES C VSCAD++ AA+ SV ++GG + VP GRRD
Sbjct: 67 DAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRD 126
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQ-EEMVTLSGAHTIGRSHCTSFSNRLY 183
+ A NLP P FT+ QL SF N G + ++V LSG HT G++ C S +RLY
Sbjct: 127 SLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRSIMDRLY 186
Query: 184 NFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLF 243
NFS T DP+LN Y L+ C +G N + +V + +P+I D YY+++ +GL
Sbjct: 187 NFSNTGLPDPTLNTTYLQTLRGLCPLNG-NLSALVDFDLRTPTIFDNKYYVNLEEQKGLI 245
Query: 244 TSDQTLLSDP---ATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCRVV 300
SDQ L S P T V A + + + F AM +MG I LT + G+IR NCRVV
Sbjct: 246 QSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVV 305
Query: 301 N 301
N
Sbjct: 306 N 306
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|3ATJ|B Chain B, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|1GWT|A Chain A, Recombinant Horseradish Peroxidase C1a Phe221met
Length = 309
Score = 247 bits (630), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 134/301 (44%), Positives = 180/301 (59%), Gaps = 5/301 (1%)
Query: 5 FYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEK 64
FY NSC + IV+D + + D +AA ++R+HFHDCFV GCDAS+L+D+T+S EK
Sbjct: 7 FYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEK 66
Query: 65 DSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPSGRRD 124
D+ N S RGF VID KAA+ES C VSCAD++ AA+ SV ++GG + VP GRRD
Sbjct: 67 DAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRD 126
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQ-EEMVTLSGAHTIGRSHCTSFSNRLY 183
+ A NLP P FT+ QL SF N G + ++V LSG HT G++ C +RLY
Sbjct: 127 SLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLY 186
Query: 184 NFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLF 243
NFS T DP+LN Y L+ C +G N + +V M+ +P+I D YY+++ +GL
Sbjct: 187 NFSNTGLPDPTLNTTYLQTLRGLCPLNG-NLSALVDMDLRTPTIFDNKYYVNLEEQKGLI 245
Query: 244 TSDQTLLSDP---ATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCRVV 300
SDQ L S P T V A + + + F AM +MG I LT + G+IR NCRVV
Sbjct: 246 QSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVV 305
Query: 301 N 301
N
Sbjct: 306 N 306
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate
pdb|1W4Y|A Chain A, Ferrous Horseradish Peroxidase C1a In Complex With Carbon
Monoxide
Length = 323
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 179/301 (59%), Gaps = 5/301 (1%)
Query: 5 FYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEK 64
FY NSC + IV+D + + D +AA ++R+HFHDCFV GCDAS+L+D+T+S EK
Sbjct: 6 FYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEK 65
Query: 65 DSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPSGRRD 124
D+ N S RGF VID KAA+ES C VSCAD++ AA+ SV ++GG + VP GRRD
Sbjct: 66 DAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRD 125
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQ-EEMVTLSGAHTIGRSHCTSFSNRLY 183
+ A NLP P FT+ QL SF N G + ++V LSG HT G++ C +RLY
Sbjct: 126 SLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLY 185
Query: 184 NFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLF 243
NFS T DP+LN Y L+ C +G N + +V + +P+I D YY+++ +GL
Sbjct: 186 NFSNTGLPDPTLNTTYLQTLRGLCPLNG-NLSALVDFDLRTPTIFDNKYYVNLEEQKGLI 244
Query: 244 TSDQTLLSDP---ATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCRVV 300
SDQ L S P T V A + + + F AM +MG I LT + G+IR NCRVV
Sbjct: 245 QSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVV 304
Query: 301 N 301
N
Sbjct: 305 N 305
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|B Chain B, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|C Chain C, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|D Chain D, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|E Chain E, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|F Chain F, Recombinant Horseradish Peroxidase C1a
pdb|1HCH|A Chain A, Structure Of Horseradish Peroxidase C1a Compound I
Length = 306
Score = 244 bits (624), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 179/301 (59%), Gaps = 5/301 (1%)
Query: 5 FYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEK 64
FY NSC + IV+D + + D +AA ++R+HFHDCFV GCDAS+L+D+T+S EK
Sbjct: 6 FYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEK 65
Query: 65 DSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPSGRRD 124
D+ N S RGF VID KAA+ES C VSCAD++ AA+ SV ++GG + VP GRRD
Sbjct: 66 DAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRD 125
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQ-EEMVTLSGAHTIGRSHCTSFSNRLY 183
+ A NLP P FT+ QL SF N G + ++V LSG HT G++ C +RLY
Sbjct: 126 SLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLY 185
Query: 184 NFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLF 243
NFS T DP+LN Y L+ C +G N + +V + +P+I D YY+++ +GL
Sbjct: 186 NFSNTGLPDPTLNTTYLQTLRGLCPLNG-NLSALVDFDLRTPTIFDNKYYVNLEEQKGLI 244
Query: 244 TSDQTLLSDP---ATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCRVV 300
SDQ L S P T V A + + + F AM +MG I LT + G+IR NCRVV
Sbjct: 245 QSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVV 304
Query: 301 N 301
N
Sbjct: 305 N 305
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic
Acid
pdb|7ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Complex With
Cyanide And Ferulic Acid
pdb|1H5D|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-11% Dose)
pdb|1H5E|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (11-22% Dose)
pdb|1H5F|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (22-33% Dose)
pdb|1H5G|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (33-44% Dose)
pdb|1H5I|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (56-67% Dose)
pdb|1H5J|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (67-78% Dose)
pdb|1H5K|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (78-89% Dose)
pdb|1H5M|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-100% Dose)
pdb|1H55|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Ii
pdb|1H57|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Iii
pdb|1H58|A Chain A, Structure Of Ferrous Horseradish Peroxidase C1a
pdb|1H5A|A Chain A, Structure Of Ferric Horseradish Peroxidase C1a In Complex
With Acetate
pdb|1H5C|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (100-200% Dose)
pdb|1H5H|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (44-56% Dose)
pdb|1H5L|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (89-100% Dose)
Length = 308
Score = 244 bits (624), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 179/301 (59%), Gaps = 5/301 (1%)
Query: 5 FYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEK 64
FY NSC + IV+D + + D +AA ++R+HFHDCFV GCDAS+L+D+T+S EK
Sbjct: 6 FYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEK 65
Query: 65 DSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPSGRRD 124
D+ N S RGF VID KAA+ES C VSCAD++ AA+ SV ++GG + VP GRRD
Sbjct: 66 DAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRD 125
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQ-EEMVTLSGAHTIGRSHCTSFSNRLY 183
+ A NLP P FT+ QL SF N G + ++V LSG HT G++ C +RLY
Sbjct: 126 SLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLY 185
Query: 184 NFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLF 243
NFS T DP+LN Y L+ C +G N + +V + +P+I D YY+++ +GL
Sbjct: 186 NFSNTGLPDPTLNTTYLQTLRGLCPLNG-NLSALVDFDLRTPTIFDNKYYVNLEEQKGLI 244
Query: 244 TSDQTLLSDP---ATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCRVV 300
SDQ L S P T V A + + + F AM +MG I LT + G+IR NCRVV
Sbjct: 245 QSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVV 304
Query: 301 N 301
N
Sbjct: 305 N 305
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln
Length = 309
Score = 244 bits (624), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 179/301 (59%), Gaps = 5/301 (1%)
Query: 5 FYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEK 64
FY NSC + IV+D + + D +AA ++R+HFHDCFV GCDAS+L+D+T+S EK
Sbjct: 7 FYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEK 66
Query: 65 DSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPSGRRD 124
D+ N S RGF VID KAA+ES C VSCAD++ AA+ SV ++GG + VP GRRD
Sbjct: 67 DAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRD 126
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQ-EEMVTLSGAHTIGRSHCTSFSNRLY 183
+ A NLP P FT+ QL SF N G + ++V LSG HT G++ C +RLY
Sbjct: 127 SLQAFLDLANANLPQPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLY 186
Query: 184 NFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLF 243
NFS T DP+LN Y L+ C +G N + +V + +P+I D YY+++ +GL
Sbjct: 187 NFSNTGLPDPTLNTTYLQTLRGLCPLNG-NLSALVDFDLRTPTIFDNKYYVNLEEQKGLI 245
Query: 244 TSDQTLLSDP---ATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCRVV 300
SDQ L S P T V A + + + F AM +MG I LT + G+IR NCRVV
Sbjct: 246 QSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVV 305
Query: 301 N 301
N
Sbjct: 306 N 306
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
pdb|2ATJ|B Chain B, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
Length = 308
Score = 244 bits (624), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 179/301 (59%), Gaps = 5/301 (1%)
Query: 5 FYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEK 64
FY NSC + IV+D + + D +AA ++R+HFHDCFV GCDAS+L+D+T+S EK
Sbjct: 7 FYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEK 66
Query: 65 DSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPSGRRD 124
D+ N S RGF VID KAA+ES C VSCAD++ AA+ SV ++GG + VP GRRD
Sbjct: 67 DAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRD 126
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQ-EEMVTLSGAHTIGRSHCTSFSNRLY 183
+ A NLP P FT+ QL SF N G + ++V LSG HT G++ C +RLY
Sbjct: 127 SLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLY 186
Query: 184 NFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLF 243
NFS T DP+LN Y L+ C +G N + +V + +P+I D YY+++ +GL
Sbjct: 187 NFSNTGLPDPTLNTTYLQTLRGLCPLNG-NLSALVDFDLRTPTIFDNKYYVNLEEQKGLI 245
Query: 244 TSDQTLLSDP---ATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCRVV 300
SDQ L S P T V A + + + F AM +MG I LT + G+IR NCRVV
Sbjct: 246 QSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVV 305
Query: 301 N 301
N
Sbjct: 306 N 306
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly
Length = 309
Score = 244 bits (622), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 179/301 (59%), Gaps = 5/301 (1%)
Query: 5 FYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEK 64
FY NSC + IV+D + + D +AA ++R+HFHDCFV GCDAS+L+D+T+S EK
Sbjct: 7 FYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEK 66
Query: 65 DSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPSGRRD 124
D+ N S RGF VID KAA+ES C VSCAD++ AA+ SV ++GG + VP GRRD
Sbjct: 67 DAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRD 126
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQ-EEMVTLSGAHTIGRSHCTSFSNRLY 183
+ A NLP P FT+ QL SF N G + ++V LSG HT G++ C +RLY
Sbjct: 127 SLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLY 186
Query: 184 NFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLF 243
NFS T DP+LN Y L+ C +G N + +V + +P+I D YY+++ +GL
Sbjct: 187 NFSNTGLPDPTLNTTYLQTLRGLCPLNG-NLSALVDFDLRTPTIFDNKYYVNLEEQKGLI 245
Query: 244 TSDQTLLSDP---ATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCRVV 300
SDQ L S P T V A + + + F AM +MG I LT + G+IR NCRVV
Sbjct: 246 QSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVV 305
Query: 301 N 301
N
Sbjct: 306 N 306
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In
Complex With Ferulic Acid
Length = 308
Score = 243 bits (621), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 132/301 (43%), Positives = 179/301 (59%), Gaps = 5/301 (1%)
Query: 5 FYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEK 64
FY NSC + IV+D + + D +AA ++R+HFHDCFV GCDAS+L+D+T+S EK
Sbjct: 6 FYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEK 65
Query: 65 DSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPSGRRD 124
D+ N S RGF VID KAA+ES C VSCAD++ AA+ SV ++GG + VP GRRD
Sbjct: 66 DAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRD 125
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQ-EEMVTLSGAHTIGRSHCTSFSNRLY 183
+ A NLP P FT+ QL SF N G + ++V LSG H+ G++ C +RLY
Sbjct: 126 SLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHSFGKNQCRFIMDRLY 185
Query: 184 NFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLF 243
NFS T DP+LN Y L+ C +G N + +V + +P+I D YY+++ +GL
Sbjct: 186 NFSNTGLPDPTLNTTYLQTLRGLCPLNG-NLSALVDFDLRTPTIFDNKYYVNLEEQKGLI 244
Query: 244 TSDQTLLSDP---ATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCRVV 300
SDQ L S P T V A + + + F AM +MG I LT + G+IR NCRVV
Sbjct: 245 QSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVV 304
Query: 301 N 301
N
Sbjct: 305 N 305
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y
Length = 306
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/301 (43%), Positives = 178/301 (59%), Gaps = 5/301 (1%)
Query: 5 FYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEK 64
FY NSC + IV+D + + D +AA ++R+HFHDCFV GCDAS+L+D+T+S EK
Sbjct: 6 FYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEK 65
Query: 65 DSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPSGRRD 124
D+ N S RGF VID KAA+ES C VSCAD++ AA+ SV ++GG + VP GRRD
Sbjct: 66 DAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRD 125
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQ-EEMVTLSGAHTIGRSHCTSFSNRLY 183
+ A NLP P FT+ QL SF N G + ++V L G HT G++ C +RLY
Sbjct: 126 SLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALYGGHTFGKNQCRFIMDRLY 185
Query: 184 NFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLF 243
NFS T DP+LN Y L+ C +G N + +V + +P+I D YY+++ +GL
Sbjct: 186 NFSNTGLPDPTLNTTYLQTLRGLCPLNG-NLSALVDFDLRTPTIFDNKYYVNLEEQKGLI 244
Query: 244 TSDQTLLSDP---ATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCRVV 300
SDQ L S P T V A + + + F AM +MG I LT + G+IR NCRVV
Sbjct: 245 QSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVV 304
Query: 301 N 301
N
Sbjct: 305 N 305
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
pdb|4ATJ|B Chain B, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
Length = 309
Score = 241 bits (615), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/301 (43%), Positives = 178/301 (59%), Gaps = 5/301 (1%)
Query: 5 FYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEK 64
FY NSC + IV+D + + D +AA ++R+HF DCFV GCDAS+L+D+T+S EK
Sbjct: 7 FYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFEDCFVNGCDASILLDNTTSFRTEK 66
Query: 65 DSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPSGRRD 124
D+ N S RGF VID KAA+ES C VSCAD++ AA+ SV ++GG + VP GRRD
Sbjct: 67 DAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRD 126
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQ-EEMVTLSGAHTIGRSHCTSFSNRLY 183
+ A NLP P FT+ QL SF N G + ++V LSG HT G++ C +RLY
Sbjct: 127 SLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLY 186
Query: 184 NFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLF 243
NFS T DP+LN Y L+ C +G N + +V + +P+I D YY+++ +GL
Sbjct: 187 NFSNTGLPDPTLNTTYLQTLRGLCPLNG-NLSALVDFDLRTPTIFDNKYYVNLEEQKGLI 245
Query: 244 TSDQTLLSDP---ATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCRVV 300
SDQ L S P T V A + + + F AM +MG I LT + G+IR NCRVV
Sbjct: 246 QSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVV 305
Query: 301 N 301
N
Sbjct: 306 N 306
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2
pdb|1QO4|A Chain A, Arabidopsis Thaliana Peroxidase A2 At Room Temperature
Length = 306
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 185/303 (61%), Gaps = 3/303 (0%)
Query: 1 LQVGFYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSN 60
L FY +C +A IV+ +++++ D + A L+R+HFHDCFV GCDAS+L+D T S
Sbjct: 3 LNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSI 62
Query: 61 TAEKDSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPS 120
+EK++ N S RGF V+DN K ALE+ C G+VSC+D++A A+ SV ++GG + V
Sbjct: 63 QSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLL 122
Query: 121 GRRDGRISLASEALTNLPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSN 180
GRRD + + A +++P P +++ +T F+ G ++V LSGAHT GR+ C F+N
Sbjct: 123 GRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNN 182
Query: 181 RLYNFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNR 240
RL+NFSGT + DP+LN + L+Q C Q+G+ + + ++ +P D Y+ ++ N
Sbjct: 183 RLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGS-ASTITNLDLSTPDAFDNNYFANLQSND 241
Query: 241 GLFTSDQTLLSD--PATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCR 298
GL SDQ L S +T + V A L+ FA +M+ MG I LT S GEIR +C+
Sbjct: 242 GLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCK 301
Query: 299 VVN 301
VN
Sbjct: 302 KVN 304
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant
Horseradish Peroxidase C (hrp C)
Length = 308
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/301 (43%), Positives = 177/301 (58%), Gaps = 5/301 (1%)
Query: 5 FYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEK 64
FY NSC + IV+D + + D +AA ++ +HF DCFV GCDAS+L+D+T+S EK
Sbjct: 6 FYDNSCPNVSNIVRDTIVNELRSDPRIAASILSLHFEDCFVNGCDASILLDNTTSFRTEK 65
Query: 65 DSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPSGRRD 124
D+ N S RGF VID KAA+ES C VSCAD++ AA+ SV ++GG + VP GRRD
Sbjct: 66 DAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRD 125
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQ-EEMVTLSGAHTIGRSHCTSFSNRLY 183
+ A NLP P FT+ QL SF N G + ++V LSG HT G++ C +RLY
Sbjct: 126 SLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLY 185
Query: 184 NFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLF 243
NFS T DP+LN Y L+ C +G N + +V + +P+I D YY+++ +GL
Sbjct: 186 NFSNTGLPDPTLNTTYLQTLRGLCPLNG-NLSALVDFDLRTPTIFDNKYYVNLEEQKGLI 244
Query: 244 TSDQTLLSDP---ATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCRVV 300
SDQ L S P T V A + + + F AM +MG I LT + G+IR NCRVV
Sbjct: 245 QSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVV 304
Query: 301 N 301
N
Sbjct: 305 N 305
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
Length = 309
Score = 234 bits (596), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 129/307 (42%), Positives = 193/307 (62%), Gaps = 16/307 (5%)
Query: 1 LQVGFYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSN 60
L FY +C AE IV++ V+++V KD G+AAGL+R+HFHDCFV+GCDASVL+D +++
Sbjct: 9 LSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLDGSATG 68
Query: 61 TAEKDSPVN---NPSLRGFEVIDNAKAALESVCKG-IVSCADIVAFAARDSVEISGGLGY 116
E+ +P N PS F+ +++ + LE C+G +VSC+DI+A AARDSV +SGG Y
Sbjct: 69 PGEQQAPPNLTLRPS--AFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPDY 126
Query: 117 DVPSGRRDGRISLAS--EALTNLPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSH 174
VP GRRD R S AS + L++LP P+ V L G ++VT+SG HTIG +H
Sbjct: 127 RVPLGRRDSR-SFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTIGLAH 185
Query: 175 CTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYI 234
C+SF +RL+ DP+++P + ++LK+ C GT+ V+ + +P++ D YYI
Sbjct: 186 CSSFEDRLFP-----RPDPTISPTFLSRLKRTCPAKGTDRRTVLDVR--TPNVFDNKYYI 238
Query: 235 DILRNRGLFTSDQTLLSDPATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIR 294
D++ GLF SDQ L ++ T V + A++ + + F ++ KMGQ+ V T+ GE+R
Sbjct: 239 DLVNREGLFVSDQDLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEVR 298
Query: 295 ANCRVVN 301
NC V N
Sbjct: 299 RNCSVRN 305
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase
pdb|1FHF|B Chain B, The Structure Of Soybean Peroxidase
pdb|1FHF|C Chain C, The Structure Of Soybean Peroxidase
Length = 304
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 180/299 (60%), Gaps = 3/299 (1%)
Query: 5 FYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEK 64
FYR +C + IV + + D + A L+R+HFHDCFV+GCD SVL+++T + +E+
Sbjct: 6 FYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQ 65
Query: 65 DSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPSGRRD 124
D+ N S+RG +V+++ K A+E+ C VSCADI+A AA + + GG G+ VP GRRD
Sbjct: 66 DALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRD 125
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYN 184
+ + A NLP P F + QL SFA +G ++VTLSG HT GR+ C++F NRLYN
Sbjct: 126 SLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFINRLYN 185
Query: 185 FSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFT 244
FS T + DP+LN Y L+ +C Q+ T NL ++ +P D YY ++L+ GL
Sbjct: 186 FSNTGNPDPTLNTTYLEVLRARCPQNATGDNL-TNLDLSTPDQFDNRYYSNLLQLNGLLQ 244
Query: 245 SDQTLLSDPA--TASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCRVVN 301
SDQ L S P T VN + + +NF +M+KMG IGVLT GEIR C VN
Sbjct: 245 SDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVN 303
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase.
pdb|4A5G|B Chain B, Raphanus Sativus Anionic Peroxidase
Length = 308
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 180/303 (59%), Gaps = 3/303 (0%)
Query: 1 LQVGFYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSN 60
L FY +C +A +V+ V+++ D + A L+R+HFHDCFV GCDAS+L+D++ S
Sbjct: 4 LNATFYAGTCPNASAMVRTIVQQAFQSDSRIGASLIRLHFHDCFVLGCDASILLDNSGSI 63
Query: 61 TAEKDSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPS 120
+EK++ N S RGF V+DN K ALE+ C G+VSC D++A A++ SV +SGG + V
Sbjct: 64 ISEKNAGPNANSARGFNVVDNIKTALENACPGVVSCTDVLALASQASVSLSGGPSWTVDL 123
Query: 121 GRRDGRISLASEALTNLPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSN 180
GRRD + + A +++P PT ++ +T F+ G ++V LSGAHT GR+ C FSN
Sbjct: 124 GRRDTLTANQAGANSSIPSPTQGLSNITSKFSAVGLNTNDLVALSGAHTFGRATCGVFSN 183
Query: 181 RLYNFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNR 240
RL+NFSG + DP+LN + L++ C Q G ++ +P D Y+ ++ N
Sbjct: 184 RLFNFSGKGNPDPTLNTTLLSTLQELCPQKGRGSG-STNLDLSTPDAFDNNYFTNLQSNN 242
Query: 241 GLFTSDQTLLS--DPATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCR 298
GL SDQ L S AT + V A L+ FA +M+ MG I LT S+GEIR +C+
Sbjct: 243 GLLQSDQELFSTTGSATIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSSGEIRLDCK 302
Query: 299 VVN 301
N
Sbjct: 303 KTN 305
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N
pdb|1QGJ|B Chain B, Arabidopsis Thaliana Peroxidase N
Length = 300
Score = 219 bits (559), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 176/301 (58%), Gaps = 11/301 (3%)
Query: 5 FYRNSCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEK 64
Y SC + IV+ +V ++ + +AA L+R+HFHDCFV GCDAS+L+D S EK
Sbjct: 6 IYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADS---EK 62
Query: 65 DSPVNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPSGRRD 124
+ N S RGFEVID KAA+E+ C G+VSCADI+ AARDSV +SGG G+ V GR+D
Sbjct: 63 LAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKD 122
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYN 184
G ++ + A NLP P ++ + F ++V LSGAHT G++ C FSNRL+N
Sbjct: 123 GLVANQNSA-NNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFN 181
Query: 185 FSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFT 244
F+G + D +L + L+ C G N N+ P++ + D Y+ ++L +GL +
Sbjct: 182 FTGAGNPDATLETSLLSNLQTVCPLGG-NSNITAPLDRSTTDTFDNNYFKNLLEGKGLLS 240
Query: 245 SDQTLLSDP----ATASQVNQNAKTPKLWKTNFAAAMVKMGQIGVLTASAGEIRANCRVV 300
SDQ L S T V +++ L+ +F AM++MG I ++GE+R NCRV+
Sbjct: 241 SDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEVRTNCRVI 298
Query: 301 N 301
N
Sbjct: 299 N 299
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
pdb|3RIW|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
Length = 271
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 106/278 (38%), Gaps = 66/278 (23%)
Query: 31 VAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEKDSPVNNPSLR--------GFEVIDNA 82
+ L+R+ +H+ + S + +KD N+ S+R G + +D
Sbjct: 26 LGPSLIRLAWHE-------------AASYDCFKKDGSPNSASMRFKPECLYAGNKGLDIP 72
Query: 83 KAALESVCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTNLPPP 140
+ ALE++ K +S AD+ AA ++E GG GR D + LP
Sbjct: 73 RKALETLKKKYPQISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGPDGRLPDG 132
Query: 141 TFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHC-------------TSFSNRLYNFSG 187
+ T + + + F GF +E V L GAHT G +H F N F+
Sbjct: 133 SKTQSHVREVFRRLGFNDQETVALIGAHTCGETHIEFSGYHGPWTHDKNGFDNSF--FTQ 190
Query: 188 TMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQ 247
+ +D LNP +++Q L D L+ + SD
Sbjct: 191 LLDEDWVLNP----KVEQMQLMDRATTKLM------------------------MLPSDV 222
Query: 248 TLLSDPATASQVNQNAKTPKLWKTNFAAAMVKMGQIGV 285
LL DP+ V AK + +FA A K+ ++G
Sbjct: 223 CLLLDPSYRKYVELYAKDNDRFNKDFANAFKKLTELGT 260
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major
Peroxidase-Cytochrome C Complex
Length = 268
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 105/278 (37%), Gaps = 66/278 (23%)
Query: 31 VAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEKDSPVNNPSLR--------GFEVIDNA 82
+ L+R+ +H+ + S + +KD N+ S+R G + +D
Sbjct: 25 LGPSLIRLAWHE-------------AASYDCFKKDGSPNSASMRFKPECLYAGNKGLDIP 71
Query: 83 KAALESVCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTNLPPP 140
+ ALE++ K +S AD+ AA ++E GG GR D + LP
Sbjct: 72 RKALETLKKKYPQISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGPDGRLPDG 131
Query: 141 TFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHC-------------TSFSNRLYNFSG 187
+ T + + + F GF +E V L GAHT G H F N F+
Sbjct: 132 SKTQSHVREVFRRLGFNDQETVALIGAHTCGECHIEFSGYHGPWTHDKNGFDNSF--FTQ 189
Query: 188 TMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQ 247
+ +D LNP +++Q L D L+ + SD
Sbjct: 190 LLDEDWVLNP----KVEQMQLMDRATTKLM------------------------MLPSDV 221
Query: 248 TLLSDPATASQVNQNAKTPKLWKTNFAAAMVKMGQIGV 285
LL DP+ V AK + +FA A K+ ++G
Sbjct: 222 CLLLDPSYRKYVELYAKDNDRFNKDFANAFKKLTELGT 259
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
pdb|3RIV|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Length = 271
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 105/278 (37%), Gaps = 66/278 (23%)
Query: 31 VAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEKDSPVNNPSLR--------GFEVIDNA 82
+ L+R+ +H+ + S + +KD N+ S+R G + +D
Sbjct: 26 LGPSLIRLAWHE-------------AASYDCFKKDGSPNSASMRFKPECLYAGNKGLDIP 72
Query: 83 KAALESVCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTNLPPP 140
+ ALE++ K +S AD+ AA ++E GG GR D + LP
Sbjct: 73 RKALETLKKKYPQISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGPDGRLPDG 132
Query: 141 TFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHC-------------TSFSNRLYNFSG 187
+ T + + + F GF +E V L GAHT G H F N F+
Sbjct: 133 SKTQSHVREVFRRLGFNDQETVALIGAHTCGECHIEFSGYHGPWTHDKNGFDNSF--FTQ 190
Query: 188 TMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQ 247
+ +D LNP +++Q L D L+ + SD
Sbjct: 191 LLDEDWVLNP----KVEQMQLMDRATTKLM------------------------MLPSDV 222
Query: 248 TLLSDPATASQVNQNAKTPKLWKTNFAAAMVKMGQIGV 285
LL DP+ V AK + +FA A K+ ++G
Sbjct: 223 CLLLDPSYRKYVELYAKDNDRFNKDFANAFKKLTELGT 260
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant
Length = 261
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 76/201 (37%), Gaps = 45/201 (22%)
Query: 93 IVSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQLTQSFA 152
I+S AD A +VE++GG GR D + E LP T + L F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED-KPEPPPEG--RLPDATKGSDHLRDVFG 157
Query: 153 NK-GFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQCLQDG 211
G T +++V LSG HTIG +H F G + +
Sbjct: 158 KAMGLTDQDIVALSGGHTIGAAH-----KERSGFEGPWTSN------------------- 193
Query: 212 TNPNLVVPMNPGSPSIADTGYYIDIL--RNRGLFT--SDQTLLSDPATASQVNQNAKTPK 267
P I D Y+ ++L GL SD+ LLSDP V++ A
Sbjct: 194 -------------PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADED 240
Query: 268 LWKTNFAAAMVKMGQIGVLTA 288
+ ++A A K+ ++G A
Sbjct: 241 AFFADYAEAHQKLSELGFADA 261
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHC|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHD|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHE|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2VCN|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant W41a
pdb|2VNX|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a After Exposure To A High Dose Of X-Rays
pdb|2VNZ|X Chain X, Crystal Structure Of Dithinonite Reduced Soybean Ascorbate
Peroxidase Mutant W41a.
pdb|2VO2|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a Subjected To Low Dose X-Rays
pdb|2WD4|A Chain A, Ascorbate Peroxidase As A Heme Oxygenase: W41a Variant
Product With T-Butyl Peroxide
Length = 261
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 77/201 (38%), Gaps = 45/201 (22%)
Query: 93 IVSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQLTQSFA 152
I+S AD A +VE++GG GR D + E LP T + L F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED-KPEPPPEG--RLPDATKGSDHLRDVFG 157
Query: 153 NK-GFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQCLQDG 211
G T +++V LSG HTIG +H F G + NP+
Sbjct: 158 KAMGLTDQDIVALSGGHTIGAAH-----KERSGFEGPWTS----NPL------------- 195
Query: 212 TNPNLVVPMNPGSPSIADTGYYIDIL--RNRGLFT--SDQTLLSDPATASQVNQNAKTPK 267
I D Y+ ++L GL SD+ LLSDP V++ A
Sbjct: 196 ---------------IFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADED 240
Query: 268 LWKTNFAAAMVKMGQIGVLTA 288
+ ++A A K+ ++G A
Sbjct: 241 AFFADYAEAHQKLSELGFADA 261
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant
Length = 261
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 77/201 (38%), Gaps = 45/201 (22%)
Query: 93 IVSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQLTQSFA 152
I+S AD A +VE++GG GR D + E LP T + L F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED-KPEPPPEG--RLPDATKGSDHLRDVFG 157
Query: 153 NK-GFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQCLQDG 211
G T +++V LSG HTIG +H F G + NP+
Sbjct: 158 KAMGLTDQDIVALSGGHTIGAAH-----KEASGFEGPWTS----NPL------------- 195
Query: 212 TNPNLVVPMNPGSPSIADTGYYIDIL--RNRGLFT--SDQTLLSDPATASQVNQNAKTPK 267
I D Y+ ++L GL SD+ LLSDP V++ A
Sbjct: 196 ---------------IFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADED 240
Query: 268 LWKTNFAAAMVKMGQIGVLTA 288
+ ++A A K+ ++G A
Sbjct: 241 AFFADYAEAHQKLSELGFADA 261
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant
Length = 249
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 77/201 (38%), Gaps = 45/201 (22%)
Query: 93 IVSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQLTQSFA 152
I+S AD A +VE++GG GR D + E LP T + L F
Sbjct: 89 ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED-KPEPPPEG--RLPDATKGSDHLRDVFG 145
Query: 153 NK-GFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQCLQDG 211
G T +++V LSG HTIG +H F G + NP+
Sbjct: 146 KAMGLTDQDIVALSGGHTIGAAH-----KERSGFEGPWTS----NPL------------- 183
Query: 212 TNPNLVVPMNPGSPSIADTGYYIDIL--RNRGLFT--SDQTLLSDPATASQVNQNAKTPK 267
I D Y+ ++L GL SD+ LLSDP V++ A
Sbjct: 184 ---------------IFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADED 228
Query: 268 LWKTNFAAAMVKMGQIGVLTA 288
+ ++A A K+ ++G A
Sbjct: 229 AFFADYAEAHQKLSELGFADA 249
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii
pdb|2XIH|A Chain A, The Structure Of Ascorbate Peroxidase Compound Iii
pdb|2XI6|A Chain A, The Structure Of Ascorbate Peroxidase Compound I
pdb|2XJ6|A Chain A, The Structure Of Ferrous Ascorbate Peroxidase
Length = 249
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 77/201 (38%), Gaps = 45/201 (22%)
Query: 93 IVSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQLTQSFA 152
I+S AD A +VE++GG GR D + E LP T + L F
Sbjct: 89 ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED-KPEPPPEG--RLPDATKGSDHLRDVFG 145
Query: 153 NK-GFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQCLQDG 211
G T +++V LSG HTIG +H F G + NP+
Sbjct: 146 KAMGLTDQDIVALSGGHTIGAAH-----KERSGFEGPWTS----NPL------------- 183
Query: 212 TNPNLVVPMNPGSPSIADTGYYIDIL--RNRGLFT--SDQTLLSDPATASQVNQNAKTPK 267
I D Y+ ++L GL SD+ LLSDP V++ A
Sbjct: 184 ---------------IFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADED 228
Query: 268 LWKTNFAAAMVKMGQIGVLTA 288
+ ++A A K+ ++G A
Sbjct: 229 AFFADYAEAHQKLSELGFADA 249
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant
Length = 249
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 77/201 (38%), Gaps = 45/201 (22%)
Query: 93 IVSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQLTQSFA 152
I+S AD A +VE++GG GR D + E LP T + L F
Sbjct: 89 ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED-KPEPPPEG--RLPDATKGSDHLRDVFG 145
Query: 153 NK-GFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQCLQDG 211
G T +++V LSG HTIG +H F G + NP+
Sbjct: 146 KAMGLTDQDIVALSGGHTIGAAH-----KERSGFEGPWTS----NPL------------- 183
Query: 212 TNPNLVVPMNPGSPSIADTGYYIDIL--RNRGLFT--SDQTLLSDPATASQVNQNAKTPK 267
I D Y+ ++L GL SD+ LLSDP V++ A
Sbjct: 184 ---------------IFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADED 228
Query: 268 LWKTNFAAAMVKMGQIGVLTA 288
+ ++A A K+ ++G A
Sbjct: 229 AFFADYAEAHQKLSELGFADA 249
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase
Length = 264
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 76/201 (37%), Gaps = 45/201 (22%)
Query: 93 IVSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQLTQSFA 152
I+S AD A +VE++GG GR D + E LP T + L F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED-KPEPPPEG--RLPDATKGSDHLRDVFG 157
Query: 153 NK-GFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQCLQDG 211
G T +++V LSG HTIG +H F G + +
Sbjct: 158 KAMGLTDQDIVALSGGHTIGAAH-----KERSGFEGPWTSN------------------- 193
Query: 212 TNPNLVVPMNPGSPSIADTGYYIDIL--RNRGLFT--SDQTLLSDPATASQVNQNAKTPK 267
P I D Y+ ++L GL SD+ LLSDP V++ A
Sbjct: 194 -------------PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADED 240
Query: 268 LWKTNFAAAMVKMGQIGVLTA 288
+ ++A A K+ ++G A
Sbjct: 241 AFFADYAEAHQKLSELGFADA 261
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant
Length = 249
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 77/201 (38%), Gaps = 45/201 (22%)
Query: 93 IVSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQLTQSFA 152
I+S AD A +VE++GG GR D + E LP T + L F
Sbjct: 89 ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED-KPEPPPEG--RLPDATKGSDHLRDVFG 145
Query: 153 NK-GFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQCLQDG 211
G T +++V LSG HTIG +H F G + NP+
Sbjct: 146 KAMGLTDQDIVALSGGHTIGAAH-----KERSGFEGPWTS----NPL------------- 183
Query: 212 TNPNLVVPMNPGSPSIADTGYYIDIL--RNRGLFT--SDQTLLSDPATASQVNQNAKTPK 267
I D Y+ ++L GL SD+ LLSDP V++ A
Sbjct: 184 ---------------IFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADED 228
Query: 268 LWKTNFAAAMVKMGQIGVLTA 288
+ ++A A K+ ++G A
Sbjct: 229 AFFADYAEAHQKLSELGFADA 249
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant
Length = 261
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 76/201 (37%), Gaps = 45/201 (22%)
Query: 93 IVSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQLTQSFA 152
I+S AD A +VE++GG GR D + E LP T + L F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED-KPEPPPEG--RLPDATKGSDHLRDVFG 157
Query: 153 NK-GFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQCLQDG 211
G T +++V LSG HTIG +H F G + +
Sbjct: 158 KAMGLTDQDIVALSGGHTIGAAH-----KERSGFEGPWTSN------------------- 193
Query: 212 TNPNLVVPMNPGSPSIADTGYYIDIL--RNRGLFT--SDQTLLSDPATASQVNQNAKTPK 267
P I D Y+ ++L GL SD+ LLSDP V++ A
Sbjct: 194 -------------PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADED 240
Query: 268 LWKTNFAAAMVKMGQIGVLTA 288
+ ++A A K+ ++G A
Sbjct: 241 AFFADYAEAHQKLSELGFADA 261
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With
Ascorbate
pdb|1OAG|A Chain A, Ascorbate Peroxidase From Soybean Cytosol
pdb|1V0H|X Chain X, Ascobate Peroxidase From Soybean Cytosol In Complex With
Salicylhydroxamic Acid
pdb|2GHH|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHK|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
Length = 261
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 77/201 (38%), Gaps = 45/201 (22%)
Query: 93 IVSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQLTQSFA 152
I+S AD A +VE++GG GR D + E LP T + L F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED-KPEPPPEG--RLPDATKGSDHLRDVFG 157
Query: 153 NK-GFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQCLQDG 211
G T +++V LSG HTIG +H F G + NP+
Sbjct: 158 KAMGLTDQDIVALSGGHTIGAAH-----KERSGFEGPWTS----NPL------------- 195
Query: 212 TNPNLVVPMNPGSPSIADTGYYIDIL--RNRGLFT--SDQTLLSDPATASQVNQNAKTPK 267
I D Y+ ++L GL SD+ LLSDP V++ A
Sbjct: 196 ---------------IFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADED 240
Query: 268 LWKTNFAAAMVKMGQIGVLTA 288
+ ++A A K+ ++G A
Sbjct: 241 AFFADYAEAHQKLSELGFADA 261
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant H42a
Length = 261
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 77/201 (38%), Gaps = 45/201 (22%)
Query: 93 IVSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQLTQSFA 152
I+S AD A +VE++GG GR D + E LP T + L F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED-KPEPPPEG--RLPDATKGSDHLRDVFG 157
Query: 153 NK-GFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQCLQDG 211
G T +++V LSG HTIG +H F G + NP+
Sbjct: 158 KAMGLTDQDIVALSGGHTIGAAH-----KERSGFEGPWTS----NPL------------- 195
Query: 212 TNPNLVVPMNPGSPSIADTGYYIDIL--RNRGLFT--SDQTLLSDPATASQVNQNAKTPK 267
I D Y+ ++L GL SD+ LLSDP V++ A
Sbjct: 196 ---------------IFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADED 240
Query: 268 LWKTNFAAAMVKMGQIGVLTA 288
+ ++A A K+ ++G A
Sbjct: 241 AFFADYAEAHQKLSELGFADA 261
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase
From Tobacco Plants And Structural Insights For Its
Instability
Length = 295
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 110/291 (37%), Gaps = 43/291 (14%)
Query: 9 SCSSAELIVKDEVRKSVLKDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEK-DSP 67
+ SA+L E K +LK K +VR+ +HD + +N + + D
Sbjct: 2 ASDSAQLKSAREDIKELLKTKFCHPIMVRLGWHDAGTYNKNIEEWPQRGGANGSLRFDVE 61
Query: 68 VNNPSLRGFEVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPSGRRDGRI 127
+ + + G N ++ G V+ AD+ A+ ++E +GG + GR D
Sbjct: 62 LKHGANAGLVNALNLLKPIKDKYSG-VTYADLFQLASATAIEEAGGPKIPMKYGRVDVTE 120
Query: 128 SLASEALTNLP---PPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYN 184
LP PP+ L F G +E+V LSGAHT+GRS +
Sbjct: 121 PEQCPEEGRLPDAGPPS-PAQHLRDVFYRMGLNDKEIVALSGAHTLGRSRP--------D 171
Query: 185 FSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIA------DTGYYIDILR 238
SG + + + +DG P PG S D Y+ DI
Sbjct: 172 RSGW------------GKPETKYTKDG-------PGAPGGQSWTAQWLKFDNSYFKDIKE 212
Query: 239 NRG----LFTSDQTLLSDPATASQVNQNAKTPKLWKTNFAAAMVKMGQIGV 285
R + +D L DP+ + A P+ + ++A A K+ +G
Sbjct: 213 RRDEDLLVLPTDAALFEDPSFKVYAEKYAADPEAFFKDYAEAHAKLSNLGA 263
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|B Chain B, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|C Chain C, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|D Chain D, Crystal Structure Of Recombinant Ascorbate Peroxidase
Length = 249
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 77/201 (38%), Gaps = 45/201 (22%)
Query: 93 IVSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQLTQSFA 152
IVS AD A +VEI+GG GR D + E LP T + L F
Sbjct: 89 IVSYADFYQLAGVVAVEITGGPEVPFHPGRED-KPEPPPEG--RLPDATKGSDHLRDVFG 145
Query: 153 NK-GFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQCLQDG 211
G + +++V LSG HTIG +H F G + NP+
Sbjct: 146 KAMGLSDQDIVALSGGHTIGAAH-----KERSGFEGPWTS----NPL------------- 183
Query: 212 TNPNLVVPMNPGSPSIADTGYYIDIL--RNRGLFT--SDQTLLSDPATASQVNQNAKTPK 267
I D Y+ ++L GL SD+ LL+D V + A
Sbjct: 184 ---------------IFDNSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADED 228
Query: 268 LWKTNFAAAMVKMGQIGVLTA 288
++ ++A A +K+ ++G A
Sbjct: 229 VFFADYAEAHLKLSELGFAEA 249
>pdb|4FCS|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 99/279 (35%), Gaps = 81/279 (29%)
Query: 36 VRMHFHDCFV-------RGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
+R+ FHD G D S++ + +T E + P N G + I +A+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPAN----AGIDEIVSAQKPF-- 91
Query: 89 VCKGIVSCADIVAFAARDSVE-ISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQL 147
V K +S D + FA V GG+ GR D ++A+ +P P +V+ +
Sbjct: 92 VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPD---AVAASPDHLVPEPFDSVDSI 148
Query: 148 TQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQC 207
+ GF+ E+V L +H+I +
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAA---------------------------------- 174
Query: 208 LQDGTNPNLVVPMNP--GSPSIADTGYYIDILRNRGLFT--------------------S 245
DG +P+ +P P +P + D+ ++I+ LF S
Sbjct: 175 --DGVDPS--IPGTPFDSTPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQS 230
Query: 246 DQTLLSDPATASQVNQNAKTPKLWKTNFAAAMVKMGQIG 284
D L DP TA + + FAA M KM +G
Sbjct: 231 DHLLARDPQTACEWQSMVNNQPKIQNRFAATMSKMALLG 269
>pdb|3FMU|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 98/257 (38%), Gaps = 37/257 (14%)
Query: 36 VRMHFHDCFV-------RGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
+R+ FHD G D S++ + +T E + P N G + I +A+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPAN----AGIDEIVSAQKPF-- 91
Query: 89 VCKGIVSCADIVAFAARDSVE-ISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQL 147
V K +S D + FA V GG+ GR D ++A+ +P P +V+ +
Sbjct: 92 VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPD---AVAASPDHLVPEPFDSVDSI 148
Query: 148 TQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQC 207
+ GF+ E+V+L +H+I + S F T ++ +Q +
Sbjct: 149 LARMGDAGFSPVEVVSLLASHSIAAADKVDPSIPGTPFDSTPG-------VFDSQFFIET 201
Query: 208 LQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAKTPK 267
G + PG+ + G L+ SD L DP TA +
Sbjct: 202 QLKGR-------LFPGTAD--NKGEAQSPLQGEIRLQSDHLLARDPQTACEWQSMVNNQP 252
Query: 268 LWKTNFAAAMVKMGQIG 284
+ FAA M KM +G
Sbjct: 253 KIQNRFAATMSKMALLG 269
>pdb|4FCN|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 319
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 99/279 (35%), Gaps = 81/279 (29%)
Query: 36 VRMHFHDCFV-------RGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
+R+ FHD G D S++ + +T E + P N G + I +A+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPAN----AGIDEIVSAQKPF-- 91
Query: 89 VCKGIVSCADIVAFAARDSVE-ISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQL 147
V K +S D + FA V GG+ GR D ++A+ +P P +V+ +
Sbjct: 92 VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPD---AVAASPDHLVPGPFDSVDSI 148
Query: 148 TQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQC 207
+ GF+ E+V L +H+I +
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAA---------------------------------- 174
Query: 208 LQDGTNPNLVVPMNP--GSPSIADTGYYIDILRNRGLFT--------------------S 245
DG +P+ +P P +P + D+ ++I+ LF S
Sbjct: 175 --DGVDPS--IPGTPFDSTPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQS 230
Query: 246 DQTLLSDPATASQVNQNAKTPKLWKTNFAAAMVKMGQIG 284
D L DP TA + + FAA M KM +G
Sbjct: 231 DHLLARDPQTACEWQSMVNNQPKIQNRFAATMSKMALLG 269
>pdb|3FM6|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 97/257 (37%), Gaps = 37/257 (14%)
Query: 36 VRMHFHDCFV-------RGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
+R+ FHD G D S++ + +T E + P N G + I +A+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPAN----AGIDEIVSAQKPF-- 91
Query: 89 VCKGIVSCADIVAFAARDSVE-ISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQL 147
V K +S D + FA V GG+ GR D ++A+ +P P +V+ +
Sbjct: 92 VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPD---AVAASPDHLVPEPQDSVDSI 148
Query: 148 TQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQC 207
+ GF+ E+V L +H+I + S F T ++ +Q +
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAADKVDPSIPGTPFDSTPG-------VFDSQFFIET 201
Query: 208 LQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAKTPK 267
G + PG+ + G L+ SD L DP TA +
Sbjct: 202 QLKGR-------LFPGTAD--NKGEAQSPLQGEIRLQSDHLLARDPQTACEWQSMVNNQP 252
Query: 268 LWKTNFAAAMVKMGQIG 284
+ FAA M KM +G
Sbjct: 253 KIQNRFAATMSKMALLG 269
>pdb|3FKG|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 97/257 (37%), Gaps = 37/257 (14%)
Query: 36 VRMHFHDCFV-------RGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
+R+ FHD G D S++ + +T E + P N G + I +A+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPAN----AGIDEIVSAQKPF-- 91
Query: 89 VCKGIVSCADIVAFAARDSVE-ISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQL 147
V K +S D + FA V GG+ GR D ++A+ +P P +V+ +
Sbjct: 92 VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPD---AVAASPDHLVPEPFDSVDSI 148
Query: 148 TQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQC 207
+ GF+ E+V L +H+I + S F T ++ +Q +
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAADKVDPSIPGTPFDSTPE-------VFDSQFFIET 201
Query: 208 LQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAKTPK 267
G + PG+ + G L+ SD L DP TA +
Sbjct: 202 QLKGR-------LFPGTAD--NKGEAQSPLQGEIRLQSDHLLARDPQTACEWQSMVNNQP 252
Query: 268 LWKTNFAAAMVKMGQIG 284
+ FAA M KM +G
Sbjct: 253 KIQNRFAATMSKMALLG 269
>pdb|2BOQ|A Chain A, Crystal Structure Of Versatile Peroxidase
Length = 331
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 97/257 (37%), Gaps = 37/257 (14%)
Query: 36 VRMHFHDCFV-------RGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
+R+ FHD G D S++ + +T E + P N G + I +A+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPAN----AGIDEIVSAQKPF-- 91
Query: 89 VCKGIVSCADIVAFAARDSVE-ISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQL 147
V K +S D + FA V GG+ GR D ++A+ +P P +V+ +
Sbjct: 92 VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPD---AVAASPDHLVPEPFDSVDSI 148
Query: 148 TQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQC 207
+ GF+ E+V L +H+I + S F T ++ +Q +
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAADKVDPSIPGTPFDSTPE-------VFDSQFFIET 201
Query: 208 LQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAKTPK 267
G + PG+ + G L+ SD L DP TA +
Sbjct: 202 QLKGR-------LFPGTAD--NKGEAQSPLQGEIRLQSDHLLARDPQTACEWQSMVNNQP 252
Query: 268 LWKTNFAAAMVKMGQIG 284
+ FAA M KM +G
Sbjct: 253 KIQNRFAATMSKMALLG 269
>pdb|3FJW|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
pdb|3FJW|B Chain B, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 97/257 (37%), Gaps = 37/257 (14%)
Query: 36 VRMHFHDCFV-------RGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
+R+ FHD G D S++ + +T E + P N G + I +A+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPAN----AGIDEIVSAQKPF-- 91
Query: 89 VCKGIVSCADIVAFAARDSVE-ISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQL 147
V K +S D + FA V GG+ GR D ++A+ +P P +V+ +
Sbjct: 92 VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPD---AVAASPDHLVPEPFDSVDSI 148
Query: 148 TQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQC 207
+ GF+ E+V L +H+I + S F T ++ +Q +
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAADKVDPSIPGTPFDSTPG-------VFDSQFFIET 201
Query: 208 LQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAKTPK 267
G + PG+ + G L+ SD L DP TA +
Sbjct: 202 QLKGR-------LFPGTAD--NKGEAQSPLQGEIRLQSDHLLARDPQTACEWQSMVNNQP 252
Query: 268 LWKTNFAAAMVKMGQIG 284
+ FAA M KM +G
Sbjct: 253 KIQNRFAATMSKMALLG 269
>pdb|3FM1|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 35.0 bits (79), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 94/258 (36%), Gaps = 39/258 (15%)
Query: 36 VRMHFHDCFV-------RGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
+R+ FHD G D S++ + +T E + P N G + I +A+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPAN----AGIDEIVSAQKPF-- 91
Query: 89 VCKGIVSCADIVAFAARDSVE-ISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQL 147
V K +S D + FA V GG+ GR D ++A+ +P P +V+ +
Sbjct: 92 VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPD---AVAASPDHLVPEPFDSVDSI 148
Query: 148 TQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQC 207
+ GF+ E+V L +H+I + S F T Q QLK +
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAADKVDPSIPGTPFDST-PQVFDSQFFIETQLKGRL 207
Query: 208 LQDGTNPNLVVPMNPGSPSIADT-GYYIDILRNRGLFTSDQTLLSDPATASQVNQNAKTP 266
P AD G L+ SD L DP TA +
Sbjct: 208 F----------------PGTADNKGEAQSPLQGEIRLQSDHLLARDPQTACEWQSMVNNQ 251
Query: 267 KLWKTNFAAAMVKMGQIG 284
+ FAA M KM +G
Sbjct: 252 PKIQNRFAATMSKMALLG 269
>pdb|2W23|A Chain A, Structure Of Mutant W169y Of Pleurotus Eryngii Versatile
Peroxidase (Vp)
Length = 316
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 97/257 (37%), Gaps = 37/257 (14%)
Query: 36 VRMHFHDCFV-------RGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
+R+ FHD G D S++ + +T E + P N G + I +A+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPAN----AGIDEIVSAQKPF-- 91
Query: 89 VCKGIVSCADIVAFAARDSVE-ISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQL 147
V K +S D + FA V GG+ GR D ++A+ +P P +V+ +
Sbjct: 92 VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPD---AVAASPDHLVPEPFDSVDSI 148
Query: 148 TQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQC 207
+ GF+ E+V L +H+I + S F T ++ +Q +
Sbjct: 149 LARMGDAGFSPVEVVYLLASHSIAAADKVDPSIPGTPFDSTPG-------VFDSQFFIET 201
Query: 208 LQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAKTPK 267
G + PG+ + G L+ SD L DP TA +
Sbjct: 202 QLKGR-------LFPGTAD--NKGEAQSPLQGEIRLQSDHLLARDPQTACEWQSMVNNQP 252
Query: 268 LWKTNFAAAMVKMGQIG 284
+ FAA M KM +G
Sbjct: 253 KIQNRFAATMSKMALLG 269
>pdb|2VKA|A Chain A, Site-directed Mutagenesis Of The Catalytic Tryptophan
Environment In Pleurotus Eryngii Versatile Peroxidase
Length = 317
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 97/257 (37%), Gaps = 37/257 (14%)
Query: 36 VRMHFHDCFV-------RGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
+R+ FHD G D S++ + +T E + P N G + I +A+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPAN----AGIDEIVSAQKPF-- 91
Query: 89 VCKGIVSCADIVAFAARDSVE-ISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQL 147
V K +S D + FA V GG+ GR D ++A+ +P P +V+ +
Sbjct: 92 VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPD---AVAASPDHLVPEPFDSVDSI 148
Query: 148 TQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQC 207
+ GF+ E+V L +H+I + S F T ++ +Q +
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAADKVDPSIPGTPFDSTPG-------VFDSQFFIET 201
Query: 208 LQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAKTPK 267
G + PG+ + G L+ SD L DP TA +
Sbjct: 202 QLKGR-------LFPGTAD--NKGEAQSPLQGEIRLQSDHLLARDPQTACEWQSFVNNQP 252
Query: 268 LWKTNFAAAMVKMGQIG 284
+ FAA M KM +G
Sbjct: 253 KIQNRFAATMSKMALLG 269
>pdb|4FDQ|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 34.7 bits (78), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 97/257 (37%), Gaps = 37/257 (14%)
Query: 36 VRMHFHDCFV-------RGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
+R+ FHD G D S++ + +T E + P N G + I +A+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPAN----AGIDEIVSAQKPF-- 91
Query: 89 VCKGIVSCADIVAFAARDSVE-ISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQL 147
V K +S D + FA V GG+ GR D ++A+ +P P +V+ +
Sbjct: 92 VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPD---AVAASPDHLVPGPFDSVDSI 148
Query: 148 TQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQC 207
+ GF+ E+V L +H+I + S F T ++ +Q +
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAADKVDPSIPGTPFDSTPE-------VFDSQFFIET 201
Query: 208 LQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAKTPK 267
G + PG+ + G L+ SD L DP TA +
Sbjct: 202 QLKGR-------LFPGTAD--NKGEAQSPLQGEIRLQSDHLLARDPQTACEWQSMVNNQP 252
Query: 268 LWKTNFAAAMVKMGQIG 284
+ FAA M KM +G
Sbjct: 253 KIQNRFAATMSKMALLG 269
>pdb|3FM4|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 34.7 bits (78), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 97/257 (37%), Gaps = 37/257 (14%)
Query: 36 VRMHFHDCFV-------RGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
+R+ FHD G D S++ + +T E + P N G + I +A+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPAN----AGIDEIVSAQKPF-- 91
Query: 89 VCKGIVSCADIVAFAARDSVE-ISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQL 147
V K +S D + FA V GG+ GR D ++A+ +P P +V+ +
Sbjct: 92 VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPD---AVAASPDHLVPEPFDSVDSI 148
Query: 148 TQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQC 207
+ GF+ E+V L +H+I + S F T ++ +Q +
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAAAKVDPSIPGTPFDSTPG-------VFDSQFFIET 201
Query: 208 LQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAKTPK 267
G + PG+ + G L+ SD L DP TA +
Sbjct: 202 QLKGR-------LFPGTAD--NKGEAQSPLQGEIRLQSDHLLARDPQTACEWQSMVNNQP 252
Query: 268 LWKTNFAAAMVKMGQIG 284
+ FAA M KM +G
Sbjct: 253 KIQNRFAATMSKMALLG 269
>pdb|4G05|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 317
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 97/257 (37%), Gaps = 37/257 (14%)
Query: 36 VRMHFHDCFV-------RGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
+R+ FHD G D S++ + +T E + P N G + I +A+
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPAN----AGIDEIVSAQKPF-- 91
Query: 89 VCKGIVSCADIVAFAARDSVE-ISGGLGYDVPSGRRDGRISLASEALTNLPPPTFTVNQL 147
V K +S D + FA V GG+ GR D ++A+ +P P +V+ +
Sbjct: 92 VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPD---AVAASPDHLVPGPFDSVDSI 148
Query: 148 TQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQC 207
+ GF+ E+V L +H+I + S F T ++ +Q +
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAADKVDPSIPGTPFDSTPE-------VFDSQFFIET 201
Query: 208 LQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAKTPK 267
G + PG+ + G L+ SD L DP TA +
Sbjct: 202 QLKGR-------LFPGTAD--NKGEAQSPLQGEIRLQSDHLLARDPQTACEWQSMVNNQP 252
Query: 268 LWKTNFAAAMVKMGQIG 284
+ FAA M KM +G
Sbjct: 253 KIQNRFAATMSKMALLG 269
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In
Cytochrome C Peroxidase (Ccp)
Length = 294
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 97/263 (36%), Gaps = 36/263 (13%)
Query: 30 GVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALESV 89
G LVR+ +H D + T N+PS G + N LE +
Sbjct: 41 GYGPVLVRLAWHTSGT--WDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEPI 95
Query: 90 CKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFTV 144
K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 96 HKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKDA 151
Query: 145 NQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSL--NPMYAAQ 202
+ + F E+V L GAHT+G++H + + G + +P++ N Y
Sbjct: 152 DYVRTFFQRLNMNDREVVALMGAHTLGKTHLKNSG-----YEGPWTANPNVFDNSFYLNL 206
Query: 203 LKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQN 262
L + + + N + +GY + +D +L+ DP S V +
Sbjct: 207 LNEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEY 251
Query: 263 AKTPKLWKTNFAAAMVKMGQIGV 285
A + +F+ A K+ + G+
Sbjct: 252 ANDQDKFFKDFSKAFEKLLENGI 274
>pdb|1MN2|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant E35q,
D179n
Length = 357
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 34/157 (21%)
Query: 35 LVRMHFHDCFV----------RGCDASVLIDST-----SSNTAEKDSPVNNPSLRGFEVI 79
++R+ FHD G D S+L+ T S+N DS VNN L F
Sbjct: 40 VIRLTFHDAIAISRSQGPKAGGGADGSMLLFPTVEPNFSANNGIDDS-VNN--LIPFMQK 96
Query: 80 DNAKAALESVCKGIVSCADIVAFAARDSVE-ISGGLGYDVPSGRRDGRISLASEALTNLP 138
N +S AD+V FA ++ G + +GR + I+ A + L +P
Sbjct: 97 HN-----------TISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIA-AVDGL--IP 142
Query: 139 PPTFTVNQLTQSFANKG-FTQEEMVTLSGAHTIGRSH 174
P +V ++ Q F + G FT E+V+L +H++ R++
Sbjct: 143 EPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARAN 179
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m3
Length = 294
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 94/261 (36%), Gaps = 32/261 (12%)
Query: 30 GVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALESV 89
G LVR+ +H D + T N+PS G + N LE +
Sbjct: 41 GYGPVLVRLAWHTSGT--WDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEPI 95
Query: 90 CKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFTV 144
K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 96 HKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKDA 151
Query: 145 NQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLK 204
+ + F E+V LSGAHT+G++H N Y T + + N Y L
Sbjct: 152 DYVRTFFQRLNMNDREVVALSGAHTLGKTHL---KNSGYEGPWTANNNVFDNSFYLNLLN 208
Query: 205 QQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAK 264
+ + + N + +GY +D +L+ DP S V + A
Sbjct: 209 EDWKLEKNDAN-------NEQWDSKSGYL--------QLPTDYSLIQDPKYLSIVKEYAN 253
Query: 265 TPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 254 DQDKFFKDFSKAFEKLLENGI 274
>pdb|1MN1|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant D179n
Length = 357
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 34/157 (21%)
Query: 35 LVRMHFHDCFV----------RGCDASVLIDST-----SSNTAEKDSPVNNPSLRGFEVI 79
++R+ FHD G D S+L+ T S+N DS VNN L F
Sbjct: 40 VIRLTFHDAIAISRSQGPKAGGGADGSMLLFPTVEPNFSANNGIDDS-VNN--LIPFMQK 96
Query: 80 DNAKAALESVCKGIVSCADIVAFAARDSVE-ISGGLGYDVPSGRRDGRISLASEALTNLP 138
N +S AD+V FA ++ G + +GR + I+ A + L +P
Sbjct: 97 HN-----------TISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIA-AVDGL--IP 142
Query: 139 PPTFTVNQLTQSFANKG-FTQEEMVTLSGAHTIGRSH 174
P +V ++ Q F + G FT E+V+L +H++ R++
Sbjct: 143 EPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARAN 179
>pdb|1YYD|A Chain A, High Resolution Crystal Structure Of Manganese Peroxidase
pdb|1YYG|A Chain A, Manganese Peroxidase Complexed With Cd(Ii) Inhibitor
pdb|1YZP|A Chain A, Substrate-free Manganese Peroxidase
pdb|1YZR|A Chain A, Manganese Peroxidase-Sm(Iii) Complex
pdb|1MNP|A Chain A, Manganese Peroxidase
pdb|3M5Q|A Chain A, 0.93 A Structure Of Manganese-Bound Manganese Peroxidase
pdb|3M8M|A Chain A, 1.05 A Structure Of Manganese-Free Manganese Peroxidase
Length = 357
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 34/156 (21%)
Query: 35 LVRMHFHDCFV----------RGCDASVLIDST-----SSNTAEKDSPVNNPSLRGFEVI 79
++R+ FHD G D S+L+ T S+N DS VNN L F
Sbjct: 40 VIRLTFHDAIAISRSQGPKAGGGADGSMLLFPTVEPNFSANNGIDDS-VNN--LIPFMQK 96
Query: 80 DNAKAALESVCKGIVSCADIVAFAARDSVE-ISGGLGYDVPSGRRDGRISLASEALTNLP 138
N +S AD+V FA ++ G + +GR + I+ A + L +P
Sbjct: 97 HN-----------TISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIA-AVDGL--IP 142
Query: 139 PPTFTVNQLTQSFANKG-FTQEEMVTLSGAHTIGRS 173
P +V ++ Q F + G FT E+V+L +H++ R+
Sbjct: 143 EPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARA 178
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding
Variant Of Cytochrome C Peroxidase
Length = 294
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 94/261 (36%), Gaps = 32/261 (12%)
Query: 30 GVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALESV 89
G LVR+ +H D + T N+PS G + N LE +
Sbjct: 41 GYGPVLVRLAWHTSGT--WDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEPI 95
Query: 90 CKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFTV 144
K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 96 HKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKDA 151
Query: 145 NQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLK 204
+ + F E+V L GAHT+G++H N Y T + + N Y L
Sbjct: 152 DYVRTFFQRLNMNDREVVALMGAHTLGKTHL---KNSGYEGPWTANNNVFDNSFYLNLLN 208
Query: 205 QQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAK 264
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 209 EDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYAN 253
Query: 265 TPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 254 DQDKFFKDFSKAFEKLLENGI 274
>pdb|1LY8|A Chain A, The Crystal Structure Of A Mutant Enzyme Of Coprinus
Cinereus Peroxidase Provides An Understanding Of Its
Increased Thermostability And Insight Into Modelling Of
Protein Structures
pdb|1LY8|B Chain B, The Crystal Structure Of A Mutant Enzyme Of Coprinus
Cinereus Peroxidase Provides An Understanding Of Its
Increased Thermostability And Insight Into Modelling Of
Protein Structures
Length = 343
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 20/150 (13%)
Query: 137 LPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLN 196
+P P TV + F + GF+ +E+V L AH++ S N + S S
Sbjct: 152 IPGPGNTVTAILDRFGDAGFSPDEVVDLLAAHSLA-------SQEGLNSAIFRSPLDSTP 204
Query: 197 PMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLF--TSDQTLLSDPA 254
++ Q + L GT PG PS+ G+ ++ G F SD L D
Sbjct: 205 QVFDTQFYIETLLKGTT-------QPG-PSL---GFAEELSPFPGGFRIRSDALLARDSR 253
Query: 255 TASQVNQNAKTPKLWKTNFAAAMVKMGQIG 284
TA + + ++ F AAM KM +G
Sbjct: 254 TACRWQSMTSSNEVMGQRFRAAMAKMSVLG 283
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With
2,6-Diaminopyridine
pdb|1AC4|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2,3,4-Trimethyl-1,3-Thiazole)
pdb|1AC8|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (3,4,5-Trimethylthiazole)
pdb|1AEB|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Methylthiazole)
pdb|1AED|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3,4-
Dimethylthiazole)
pdb|1AEE|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Aniline)
pdb|1AEF|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Aminopyridine)
pdb|1AEG|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (4-
Aminopyridine)
pdb|1AEH|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-4-
Methylthiazole)
pdb|1AEJ|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (1-
Vinylimidazole)
pdb|1AEK|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Indoline)
pdb|1AEM|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazo[1,2-
A]pyridine)
pdb|1AEN|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-5-
Methylthiazole)
pdb|1AEO|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-
Aminopyridine)
pdb|1AEQ|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2-Ethylimidazole)
pdb|1AES|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazole)
pdb|1AET|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (1-Methylimidazole)
pdb|1AEU|A Chain A, Specificity Of Ligand Binding In A Polar Cavity Of
Cytochrome C Peroxidase (2-Methylimidazole)
pdb|1AEV|A Chain A, Introduction Of Novel Substrate Oxidation Into Cytochrome
C Peroxidase By Cavity Complementation: Oxidation Of 2-
Aminothiazole And Covalent Modification Of The Enzyme
(2- Aminothiazole)
Length = 294
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 94/262 (35%), Gaps = 34/262 (12%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 41 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 94
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 95 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 150
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H N Y G + + N Y L
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPGGAANNVFTNEFYLNLL 207
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 208 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 252
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 253 NDQDKFFKDFSKAFEKLLEDGI 274
>pdb|1UB2|A Chain A, Crystal Structure Of Catalase-Peroxidase From
Synechococcus Pcc 7942
Length = 720
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQEEMVTLS-GAHTIGRSH 174
G I + E + P P T + + +FA EE V L+ G HT+G+ H
Sbjct: 218 GLIYVNPEGVDGNPDPLKTAHDVRVTFARMAMNDEETVALTAGGHTVGKCH 268
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 94/262 (35%), Gaps = 34/262 (12%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 38 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 91
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 92 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H N Y G + + N Y L
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPGGAANNVFTNEFYLNLL 204
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 205 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 249
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 250 NDQDKFFKDFSKAFEKLLEDGI 271
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With
Cyclopentane-Carboximidamide
pdb|2RBV|X Chain X, Cytochrome C Peroxidase In Complex With
(1-Methyl-1h-Pyrrol-2-Yl)- Methylamine
pdb|2RBW|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1,2-dimethyl-1h-pyridin- 5-amine
pdb|2RBY|X Chain X, 1-methyl-5-imidazolecarboxaldehyde In Complex With
Cytochrome C Peroxidase W191g
pdb|2RBZ|X Chain X, Cytochrome C Peroxidase W191g In Complex 3-Methoxypyridine
pdb|2RC0|X Chain X, Cytochrome C Peroxidase W191g In Complex With 2-Imino-4-
Methylpiperdine
pdb|2RC2|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1-Methyl-2-Vinyl- Pyridinium
pdb|2RBT|X Chain X, N-Methylbenzylamine In Complex With Cytochrome C
Peroxidase W191g
pdb|2RBX|X Chain X, Cytochrome C Peroxidase W191g In Complex With
Pyrimidine-2,4,6- Triamine.
pdb|2RC1|X Chain X, Cytochrome C Peroxidase W191g In Complex With
2,4,5-Trimethyl-3- Oxazoline
Length = 292
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 94/262 (35%), Gaps = 34/262 (12%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 39 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 92
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 93 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 148
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H N Y G + + N Y L
Sbjct: 149 AGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPGGAANNVFTNEFYLNLL 205
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 206 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 250
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 251 NDQDKFFKDFSKAFEKLLEDGI 272
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPE|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPF|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 94/262 (35%), Gaps = 34/262 (12%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 43 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 96
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 97 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 152
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H N Y G + + N Y L
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPGGAANNVFTNEFYLNLL 209
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 210 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 254
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 255 NDQDKFFKDFSKAFEKLLENGI 276
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5-
Diaminopyridine
pdb|2AS1|A Chain A, Cytochrome C Peroxidase In Complex With Thiopheneamidine
pdb|2AS2|A Chain A, Cytochrome C Peroxidase In Complex With 2-Iminopiperidine
pdb|2AS3|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
pdb|2AS4|A Chain A, Cytochrome C Peroxidase In Complex With 3-Fluorocatechol
pdb|2AS6|A Chain A, Cytochrome C Peroxidase In Complex With Cyclopentylamine
pdb|2EUN|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,4-
Diaminopyrimidine
pdb|2EUO|A Chain A, Cytochrome C Peroxidase (ccp) In Complex With 1-methyl-1-
Lambda-5-pyridin-3-yl-amine
pdb|2EUP|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-5-
Picoline
pdb|2EUQ|A Chain A, Cytochrome C Peroxydase (Ccp) In Complex With 3-
Thienylmethylamine
pdb|2EUR|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 4-
Pyridylcarbinol
pdb|2EUS|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With Benzylamine
pdb|2EUT|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-4-
Picoline
pdb|2EUU|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With
1h-Imidazol-2- Ylmethanol
pdb|1AA4|A Chain A, Specificity Of Ligand Binding In A Buried Polar Cavity Of
Cytochrome C Peroxidase
pdb|1CMP|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMQ|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMT|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
pdb|1RYC|A Chain A, Cytochrome C Peroxidase W191g From Saccharomyces
Cerevisiae
pdb|2Y5A|A Chain A, Cytochrome C Peroxidase (Ccp) W191g Bound To
3-Aminopyridine
Length = 294
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 94/262 (35%), Gaps = 34/262 (12%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 41 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 94
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 95 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 150
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H N Y G + + N Y L
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPGGAANNVFTNEFYLNLL 207
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 208 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 252
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 253 NDQDKFFKDFSKAFEKLLENGI 274
>pdb|3Q3U|A Chain A, Trametes Cervina Lignin Peroxidase
Length = 338
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 108/290 (37%), Gaps = 37/290 (12%)
Query: 7 RNSCSSAELIVKDEVRKSVL---KDKGVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAE 63
+N+ A V D+++ ++ K + A VR+ FHD +V + +
Sbjct: 11 KNAACCAWFPVLDDIQANLFNGGKCEEEAHEAVRLTFHD--------AVGFSLAAQKAGK 62
Query: 64 KDSPVNNPSLRGFEVIDNA---KAALESVCKGIVSCADIVAFAARDSVEISGGLGY-DVP 119
+ S+ F I+ A LE +G + A + D V+ +G +G +
Sbjct: 63 FGGGGADGSILAFSDIETAFIPNFGLEFTTEGFIPFALAHGVSFGDFVQFAGAVGAANCA 122
Query: 120 SGRR----DGRISLASEALTNL-PPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSH 174
G R GR +++ + L P PT + +++ A+ GF+ E+V L +H+I +
Sbjct: 123 GGPRLQFLAGRSNISQPSPDGLVPDPTDSADKILARMADIGFSPTEVVHLLASHSIAAQY 182
Query: 175 CTSFSNRLYNFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYI 234
F T S ++ Q + L GT GS G +
Sbjct: 183 EVDTDVAGSPFDSTPS-------VFDTQFFVESLLHGTQFT-------GS---GQGGEVM 225
Query: 235 DILRNRGLFTSDQTLLSDPATASQVNQNAKTPKLWKTNFAAAMVKMGQIG 284
+ SD L DP TA + + NF A M ++ IG
Sbjct: 226 SPIPGEFRLQSDFALSRDPRTACEWQALVNNQQAMVNNFEAVMSRLAVIG 275
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I
Length = 294
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 95/263 (36%), Gaps = 36/263 (13%)
Query: 30 GVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALESV 89
G LVR+ +H D + T N+PS G + N LE +
Sbjct: 41 GYGPVLVRLAWHTSGT--WDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEPI 95
Query: 90 CKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFTV 144
K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 96 HKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKDA 151
Query: 145 NQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLK 204
+ + F E+V L GAH +G++H + SG + N ++ +
Sbjct: 152 DYVRTFFQRLNMNDREVVALMGAHALGKTHLKN--------SGYEGPWGAANNVFTNEFY 203
Query: 205 QQCLQDGTNPNLVVPMNPGSPSIAD--TGYYIDILRNRGLFTSDQTLLSDPATASQVNQN 262
L N N + N + D +GY + +D +L+ DP S V +
Sbjct: 204 LNLL----NENWKLEKNDANNEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEY 251
Query: 263 AKTPKLWKTNFAAAMVKMGQIGV 285
A + +F+ A K+ + G+
Sbjct: 252 ANDQDKFFKDFSKAFEKLLENGI 274
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m2
Length = 294
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 93/261 (35%), Gaps = 32/261 (12%)
Query: 30 GVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALESV 89
G LVR+ +H D + T N+PS G + N LE +
Sbjct: 41 GYGPVLVRLAWHTSGT--WDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEPI 95
Query: 90 CKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFTV 144
K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 96 HKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKDA 151
Query: 145 NQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLK 204
+ + F E+V L GAHT+G++H N Y T + + N Y L
Sbjct: 152 DYVRTFFQRLNMNDREVVALMGAHTLGKTHL---KNSGYEGPWTANNNVFDNSFYLNLLN 208
Query: 205 QQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAK 264
+ + + N + +GY +D +L+ DP S V + A
Sbjct: 209 EDWKLEKNDAN-------NEQWDSKSGYL--------QLPTDYSLIQDPKYLSIVKEYAN 253
Query: 265 TPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 254 DQDKFFKDFSKAFEKLLENGI 274
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C
Peroxidase (Ccp)
Length = 294
Score = 30.8 bits (68), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 93/261 (35%), Gaps = 32/261 (12%)
Query: 30 GVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALESV 89
G LVR+ +H D + T N+PS G + N LE +
Sbjct: 41 GYGPVLVRLAWHTSGT--WDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEPI 95
Query: 90 CKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFTV 144
K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 96 HKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKDA 151
Query: 145 NQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLK 204
+ + F E+V L GAHT+G++H N Y + + N Y L
Sbjct: 152 DYVRTFFQRLNMNDREVVALMGAHTLGKTHL---KNSGYEGPWDATNNVFDNSFYLNLLN 208
Query: 205 QQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAK 264
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 209 EDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYAN 253
Query: 265 TPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 254 DQDKFFKDFSKAFEKLLENGI 274
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 30.8 bits (68), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 93/262 (35%), Gaps = 34/262 (12%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ FH + G D + T N+PS G + N LE
Sbjct: 43 GYGPVLVRLAFH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 96
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 97 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 152
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H N Y + + N Y L
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAANNVFTNEFYLNLL 209
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 210 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 254
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 255 NDQDKFFKDFSKAFEKLLENGI 276
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 96/264 (36%), Gaps = 38/264 (14%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 38 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 91
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 92 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H + SG + N ++ +
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLKN--------SGYEGPQGAANNVFTNEF 199
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIAD--TGYYIDILRNRGLFTSDQTLLSDPATASQVNQ 261
L N + + N + D +GY + +D +L+ DP S V +
Sbjct: 200 YLNLL----NEDWKLEKNDANNEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKE 247
Query: 262 NAKTPKLWKTNFAAAMVKMGQIGV 285
A + +F+ A K+ + G+
Sbjct: 248 YANDQDKFFKDFSKAFEKLLEDGI 271
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase
Length = 294
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 96/264 (36%), Gaps = 38/264 (14%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 41 GYGDDLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 94
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 95 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 150
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H + SG + N ++ +
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLKN--------SGYEGPWGAANNVFTNEF 202
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIAD--TGYYIDILRNRGLFTSDQTLLSDPATASQVNQ 261
L N + + N + D +GY + +D +L+ DP S V +
Sbjct: 203 YLNLL----NEDWKLEKNDANNEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKE 250
Query: 262 NAKTPKLWKTNFAAAMVKMGQIGV 285
A + +F+ A K+ + G+
Sbjct: 251 YANDQDKFFKDFSKAFEKLLENGI 274
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 96/264 (36%), Gaps = 38/264 (14%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 43 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 96
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 97 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 152
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H + SG + N ++ +
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLKN--------SGYEGPQGAANNVFTNEF 204
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIAD--TGYYIDILRNRGLFTSDQTLLSDPATASQVNQ 261
L N + + N + D +GY + +D +L+ DP S V +
Sbjct: 205 YLNLL----NEDWKLEKNDANNEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKE 252
Query: 262 NAKTPKLWKTNFAAAMVKMGQIGV 285
A + +F+ A K+ + G+
Sbjct: 253 YANDQDKFFKDFSKAFEKLLENGI 276
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
Length = 294
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 94/262 (35%), Gaps = 34/262 (12%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 41 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 94
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 95 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 150
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H N Y G + + N Y L
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPGGAANNVFTNEFYLNLL 207
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + ++ +L+ DP S V + A
Sbjct: 208 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTNYSLIQDPKYLSIVKEYA 252
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 253 NDQDKFFKDFSKAFEKLLENGI 274
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol
Length = 296
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 98/273 (35%), Gaps = 34/273 (12%)
Query: 20 EVRKSVLKDKGVAAG--LVRMHFHDCFVRGCDASVLIDSTSSNTAEKDSPVNNPSLRGFE 77
++R+ D + G LVR+ +H D + T N+PS G +
Sbjct: 31 KLREDDEYDNAIGYGPVLVRLAWHTSGT--WDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ 88
Query: 78 VIDNAKAALESVCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALT 135
N LE + K +S D+ + +V+ G +P R GR+ +
Sbjct: 89 ---NGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEWQGP--KIP--WRCGRVDTPEDTTP 141
Query: 136 N---LPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQD 192
+ LP + + F E+V L GAH +G++H N Y + +
Sbjct: 142 DNGRLPDADKDADYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAANN 198
Query: 193 PSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSD 252
N Y L + + + N + +GY + +D +L+ D
Sbjct: 199 VFTNEFYLNLLNEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQD 243
Query: 253 PATASQVNQNAKTPKLWKTNFAAAMVKMGQIGV 285
P S V + A + +F+ A K+ + G+
Sbjct: 244 PKYLSIVKEYANDQDKFFKDFSKAFEKLLENGI 276
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 289
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 94/262 (35%), Gaps = 36/262 (13%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 38 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 91
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 92 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H + + G + + N Y L
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLKNSG-----YEGGGANNVFTNEFYLNLL 202
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 203 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 247
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 248 NDQDKFFKDFSKAFEKLLENGI 269
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 96/264 (36%), Gaps = 38/264 (14%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 38 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 91
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 92 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H + SG + N ++ +
Sbjct: 148 AGYVRTFFQRLNMNDREVVALKGAHALGKTHLKN--------SGYEGPWGAANNVFTNEF 199
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIAD--TGYYIDILRNRGLFTSDQTLLSDPATASQVNQ 261
L N + + N + D +GY + +D +L+ DP S V +
Sbjct: 200 YLNLL----NEDWKLEKNDANNEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKE 247
Query: 262 NAKTPKLWKTNFAAAMVKMGQIGV 285
A + +F+ A K+ + G+
Sbjct: 248 YANDQDKFFKDFSKAFEKLLENGI 271
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
pdb|1S6V|C Chain C, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
Length = 294
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 92/261 (35%), Gaps = 32/261 (12%)
Query: 30 GVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALESV 89
G LVR+ +H D + T N+PS G + N LE +
Sbjct: 41 GYGPVLVRLAWHTSGT--WDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEPI 95
Query: 90 CKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFTV 144
K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 96 HKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRAGRVDTPEDTTPDNGRLPDADKDA 151
Query: 145 NQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLK 204
+ + F E+V L GAH +G++H N Y + + N Y L
Sbjct: 152 DYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAANNCFTNEFYLNLLN 208
Query: 205 QQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAK 264
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 209 EDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYAN 253
Query: 265 TPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 254 DQDKFFKDFSKAFEKLLENGI 274
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of
Cytochrome C Peroxidase By Structure-Based Engineering
Length = 296
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 93/262 (35%), Gaps = 34/262 (12%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 43 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 96
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 97 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRAGRVDTPEDTTPDNGRLPDADKD 152
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H N Y + + N Y L
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGCANNVFTNEFYLNLL 209
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 210 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 254
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 255 NDQDKFFKDFSKAFEKLLENGI 276
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 290
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 94/262 (35%), Gaps = 36/262 (13%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 39 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 92
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 93 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 148
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H + + G + + N Y L
Sbjct: 149 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLKNSG-----YEGGGANNVFTNEFYLNLL 203
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 204 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 248
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 249 NDQDKFFKDFSKAFEKLLENGI 270
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 99/274 (36%), Gaps = 36/274 (13%)
Query: 20 EVRKSVLKDKGVAAG--LVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGF 76
++R+ D + G LVR+ +H + G D + T N+PS G
Sbjct: 26 KLREDDEYDNAIGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGL 82
Query: 77 EVIDNAKAALESVCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEAL 134
+ N LE + K +S D+ + +V+ G +P R GR+ +
Sbjct: 83 Q---NGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTT 135
Query: 135 TN---LPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQ 191
+ LP + F E+V L GAH +G++H N Y +
Sbjct: 136 PDNGRLPDADKDAGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAAN 192
Query: 192 DPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLS 251
+ N Y L + + + N + +GY + +D +L+
Sbjct: 193 NVFTNEFYLNLLNEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQ 237
Query: 252 DPATASQVNQNAKTPKLWKTNFAAAMVKMGQIGV 285
DP S V + A + +F+ A K+ + G+
Sbjct: 238 DPKYLSIVKEYANDQDKFFKDFSKAFEKLLEDGI 271
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Pathway Excised In A Complex With A
Peptide Wire
Length = 295
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 94/262 (35%), Gaps = 36/262 (13%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 44 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 97
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 98 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 153
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H + + G + + N Y L
Sbjct: 154 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLKNSG-----YEGGGANNVFTNEFYLNLL 208
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 209 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 253
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 254 NDQDKFFKDFSKAFEKLLENGI 275
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C
Peroxidase Compound I
Length = 294
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 92/261 (35%), Gaps = 32/261 (12%)
Query: 30 GVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALESV 89
G LVR+ +H D + T N+PS G + N LE +
Sbjct: 41 GYGPVLVRLAWHTSGT--WDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEPI 95
Query: 90 CKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFTV 144
K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 96 HKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKDA 151
Query: 145 NQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLK 204
+ + F E+V L GAH +G++H N Y + + N Y L
Sbjct: 152 DYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAANNVFTNEFYLNLLN 208
Query: 205 QQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAK 264
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 209 EDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYAN 253
Query: 265 TPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 254 DQDKFFKDFSKAFEKLLEDGI 274
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
pdb|1BES|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 96/264 (36%), Gaps = 38/264 (14%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 38 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 91
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 92 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H + SG + N ++ +
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLKN--------SGYEGPYGAANNVFTNEF 199
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIAD--TGYYIDILRNRGLFTSDQTLLSDPATASQVNQ 261
L N + + N + D +GY + +D +L+ DP S V +
Sbjct: 200 YLNLL----NEDWKLEKNDANNEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKE 247
Query: 262 NAKTPKLWKTNFAAAMVKMGQIGV 285
A + +F+ A K+ + G+
Sbjct: 248 YANDQDKFFKDFSKAFEKLLEDGI 271
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
pdb|1BJ9|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 93/262 (35%), Gaps = 34/262 (12%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 38 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 91
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 92 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H N Y + + N Y L
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAANNVFTNEFYLNLL 204
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 205 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 249
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 250 NDQDKFFKDFSKAFEKLLEDGI 271
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii
pdb|2XJ8|A Chain A, The Structure Of Ferrous Cytochrome C Peroxidase
Length = 294
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 92/261 (35%), Gaps = 32/261 (12%)
Query: 30 GVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALESV 89
G LVR+ +H D + T N+PS G + N LE +
Sbjct: 41 GYGPVLVRLAWHTSGT--WDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEPI 95
Query: 90 CKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFTV 144
K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 96 HKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKDA 151
Query: 145 NQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLK 204
+ + F E+V L GAH +G++H N Y + + N Y L
Sbjct: 152 DYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAANNVFTNEFYLNLLN 208
Query: 205 QQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAK 264
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 209 EDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYAN 253
Query: 265 TPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 254 DQDKFFKDFSKAFEKLLENGI 274
>pdb|3N3S|A Chain A, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
pdb|3N3S|B Chain B, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
Length = 748
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQEEMVTL-SGAHTIGRSH 174
G I + E P P + +FA EE V L +G HT G++H
Sbjct: 235 GLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|2FXJ|A Chain A, Crystal Structure Of Katg At Ph 8.5
pdb|2FXJ|B Chain B, Crystal Structure Of Katg At Ph 8.5
pdb|3N3O|A Chain A, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
pdb|3N3O|B Chain B, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
Length = 748
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQEEMVTL-SGAHTIGRSH 174
G I + E P P + +FA EE V L +G HT G++H
Sbjct: 235 GLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|2FXG|A Chain A, Crystal Structure Of Katg At Ph 4.5
pdb|2FXG|B Chain B, Crystal Structure Of Katg At Ph 4.5
pdb|2FXH|A Chain A, Crystal Structure Of Katg At Ph 6.5
pdb|2FXH|B Chain B, Crystal Structure Of Katg At Ph 6.5
pdb|3N3N|A Chain A, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3N|B Chain B, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3P|A Chain A, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
pdb|3N3P|B Chain B, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
Length = 748
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQEEMVTL-SGAHTIGRSH 174
G I + E P P + +FA EE V L +G HT G++H
Sbjct: 235 GLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|3N3R|A Chain A, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
pdb|3N3R|B Chain B, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
Length = 748
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQEEMVTL-SGAHTIGRSH 174
G I + E P P + +FA EE V L +G HT G++H
Sbjct: 235 GLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|2DV1|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg
pdb|2DV1|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg
Length = 748
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQEEMVTL-SGAHTIGRSH 174
G I + E P P + +FA EE V L +G HT G++H
Sbjct: 235 GLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
pdb|3R99|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
Length = 293
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 92/261 (35%), Gaps = 32/261 (12%)
Query: 30 GVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALESV 89
G LVR+ +H D + T N+PS G + N LE +
Sbjct: 40 GYGPVLVRLAWHTSGT--WDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEPI 94
Query: 90 CKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFTV 144
K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 95 HKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKDA 150
Query: 145 NQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLK 204
+ + F E+V L GAH +G++H N Y + + N Y L
Sbjct: 151 DYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAANNVFTNEFYLNLLN 207
Query: 205 QQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAK 264
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 208 EDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYAN 252
Query: 265 TPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 253 DQDKFFKDFSKAFEKLLENGI 273
>pdb|3N3Q|A Chain A, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
pdb|3N3Q|B Chain B, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
Length = 748
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQEEMVTL-SGAHTIGRSH 174
G I + E P P + +FA EE V L +G HT G++H
Sbjct: 235 GLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase
(Mpccp)
pdb|1ZBY|A Chain A, High-resolution Crystal Structure Of Native (resting)
Cytochrome C Peroxidase (ccp)
pdb|1ZBZ|A Chain A, High-Resolution Crystal Structure Of Compound I
Intermediate Of Cytochrome C Peroxidase (Ccp)
pdb|1S73|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (R-
Isomer) [mpccp-R]
pdb|1SBM|A Chain A, Crystal Structure Of Reduced Mesopone Cytochrome C
Peroxidase (R-Isomer)
pdb|1Z53|A Chain A, The 1.13 Angstrom Structure Of Iron-Free Cytochrome C
Peroxidase
pdb|1SDQ|A Chain A, Structure Of Reduced-No Adduct Of Mesopone Cytochrome C
Peroxidase
pdb|2B0Z|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82i Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B12|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82y Cytochrome C And Cytochrome C Peroxidase
pdb|2CYP|A Chain A, Crystal Structure Of Yeast Cytochrome C Peroxidase Refined
At 1.7-Angstroms Resolution
pdb|2YCG|A Chain A, Structure Of Unreduced Ferric Cytochrome C Peroxidase
Obtained By Multicrystal Method
Length = 294
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 92/261 (35%), Gaps = 32/261 (12%)
Query: 30 GVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALESV 89
G LVR+ +H D + T N+PS G + N LE +
Sbjct: 41 GYGPVLVRLAWHTSGT--WDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEPI 95
Query: 90 CKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFTV 144
K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 96 HKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKDA 151
Query: 145 NQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLK 204
+ + F E+V L GAH +G++H N Y + + N Y L
Sbjct: 152 DYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAANNVFTNEFYLNLLN 208
Query: 205 QQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAK 264
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 209 EDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYAN 253
Query: 265 TPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 254 DQDKFFKDFSKAFEKLLENGI 274
>pdb|2DV2|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
pdb|2DV2|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
Length = 748
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQEEMVTL-SGAHTIGRSH 174
G I + E P P + +FA EE V L +G HT G++H
Sbjct: 235 GLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|1MWV|A Chain A, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|1MWV|B Chain B, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|2B2O|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2O|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2Q|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2Q|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2R|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2R|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2S|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
pdb|2B2S|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
Length = 714
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQEEMVTL-SGAHTIGRSH 174
G I + E P P + +FA EE V L +G HT G++H
Sbjct: 201 GLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 251
>pdb|1X7U|A Chain A, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
pdb|1X7U|B Chain B, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
Length = 748
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 125 GRISLASEALTNLPPPTFTVNQLTQSFANKGFTQEEMVTL-SGAHTIGRSH 174
G I + E P P + +FA EE V L +G HT G++H
Sbjct: 235 GLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCB|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|1U74|A Chain A, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U74|C Chain C, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U75|A Chain A, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|1U75|C Chain C, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|2BCN|A Chain A, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|2BCN|C Chain C, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|1CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 93/262 (35%), Gaps = 34/262 (12%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 43 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 96
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 97 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 152
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H N Y + + N Y L
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAANNVFTNEFYLNLL 209
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 210 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 254
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 255 NDQDKFFKDFSKAFEKLLENGI 276
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1-
Cytochrome C And Yeast Cytochrome C Peroxidase
pdb|2JTI|A Chain A, Solution Structure Of The Yeast Iso-1-Cytochrome C (T12a)
: Yeast Cytochrome C Peroxidase Complex
Length = 294
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 93/262 (35%), Gaps = 34/262 (12%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 41 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 94
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 95 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 150
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H N Y + + N Y L
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAANNVFTNEFYLNLL 207
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 208 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 252
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 253 NDQDKFFKDFSKAFEKLLENGI 274
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer
Between The Oxyferryl Heme And Trp 191 In Cytochrome C
Peroxidase Compound Ii
Length = 296
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 93/262 (35%), Gaps = 34/262 (12%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 43 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 96
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 97 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 152
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H N Y + + N Y L
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAANNVFTNEFYLNLL 209
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 210 NEDWKLEKNDAN-------NEQWDSKSGYI--------MLPTDYSLIQDPKYLSIVKEYA 254
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 255 NDQDKFFKDFSKAFEKLLENGI 276
>pdb|1CK6|A Chain A, Binding Mode Of Salicylhydroxamic Acid To Arthromyces
Ramosus Peroxidase
pdb|1C8I|A Chain A, Binding Mode Of Hydroxylamine To Arthromyces Ramosus
Peroxidase
pdb|1ARP|A Chain A, Crystal Structure Of The Fungal Peroxidase From
Arthromyces Ramosus At 1.9 Angstroms Resolution:
Structural Comparisons With The Lignin And Cytochrome C
Peroxidases
pdb|1ARU|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARV|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARW|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARX|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARY|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1GZA|A Chain A, Peroxidase
pdb|1GZB|A Chain A, Peroxidase
pdb|1HSR|A Chain A, Binding Mode Of Benzhydroxamic Acid To Arthromyces Ramosus
Peroxidase
pdb|2E3B|A Chain A, Crystal Structure Of The Ha-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
pdb|2E3A|A Chain A, Crystal Structure Of The No-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
pdb|2E39|A Chain A, Crystal Structure Of The Cn-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
Length = 344
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 20/150 (13%)
Query: 137 LPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLN 196
+P P TV + + GF+ +E+V L AH++ S N + S S
Sbjct: 153 IPGPGNTVTAILDRMGDAGFSPDEVVDLLAAHSLA-------SQEGLNSAIFRSPLDSTP 205
Query: 197 PMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLF--TSDQTLLSDPA 254
++ Q + L GT PG PS+ G+ ++ G F SD L D
Sbjct: 206 QVFDTQFYIETLLKGTT-------QPG-PSL---GFAEELSPFPGEFRMRSDALLARDSR 254
Query: 255 TASQVNQNAKTPKLWKTNFAAAMVKMGQIG 284
TA + + ++ + AAM KM +G
Sbjct: 255 TACRWQSMTSSNEVMGQRYRAAMAKMSVLG 284
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 93/262 (35%), Gaps = 34/262 (12%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 44 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 97
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 98 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 153
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H N Y + + N Y L
Sbjct: 154 AGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAANNVFTNEFYLNLL 210
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 211 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 255
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 256 NDQDKFFKDFSKAFEKLLENGI 277
>pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 93/262 (35%), Gaps = 34/262 (12%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 41 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 94
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 95 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDYDKD 150
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H N Y + + N Y L
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAANNVFTNEFYLNLL 207
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 208 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 252
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 253 NDQDKFFKDFSKAFEKLLENGI 274
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase
Towards A Small Molecular Substrate Peroxidase By
Substituting Tyrosine For Phe 202
Length = 291
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 93/262 (35%), Gaps = 34/262 (12%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 38 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 91
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 92 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H N Y + + N Y L
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAANNVFTNEYYLNLL 204
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 205 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 249
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 250 NDQDKFFKDFSKAFEKLLENGI 271
>pdb|1LY9|A Chain A, The Impact Of The Physical And Chemical Environment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LY9|B Chain B, The Impact Of The Physical And Chemical Environment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYC|A Chain A, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYC|B Chain B, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
Length = 343
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 20/150 (13%)
Query: 137 LPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLN 196
+P P TV + + GF+ +E+V L AH++ S N + S S
Sbjct: 152 IPGPGNTVTAILDRMGDAGFSPDEVVDLLAAHSLA-------SQEGLNSAIFRSPLDSTP 204
Query: 197 PMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLF--TSDQTLLSDPA 254
++ Q + L GT PG PS+ G+ ++ G F SD L D
Sbjct: 205 QVFDTQFYIETLLKGTT-------QPG-PSL---GFAEELSPFPGEFRMRSDALLARDSR 253
Query: 255 TASQVNQNAKTPKLWKTNFAAAMVKMGQIG 284
TA + + ++ + AAM KM +G
Sbjct: 254 TACRWQSMTSSNEVMGQRYRAAMAKMSVLG 283
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 93/262 (35%), Gaps = 34/262 (12%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 41 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 94
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 95 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDMDKD 150
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H N Y + + N Y L
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAANNVFTNEFYLNLL 207
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 208 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 252
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 253 NDQDKFFKDFSKAFEKLLENGI 274
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The
Enzyme:peroxide Complex
pdb|3CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 96/264 (36%), Gaps = 38/264 (14%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 43 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 96
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 97 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 152
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H + SG + N ++ +
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLKN--------SGYEGPFGAANNVFTNEF 204
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIAD--TGYYIDILRNRGLFTSDQTLLSDPATASQVNQ 261
L N + + N + D +GY + +D +L+ DP S V +
Sbjct: 205 YLNLL----NEDWKLEKNDANNEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKE 252
Query: 262 NAKTPKLWKTNFAAAMVKMGQIGV 285
A + +F+ A K+ + G+
Sbjct: 253 YANDQDKFFKDFSKAFEKLLENGI 276
>pdb|1LYK|A Chain A, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYK|B Chain B, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
Length = 343
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 20/150 (13%)
Query: 137 LPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLN 196
+P P TV + + GF+ +E+V L AH++ S N + S S
Sbjct: 152 IPGPGNTVTAILDRMGDAGFSPDEVVDLLAAHSLA-------SQEGLNSAIFRSPLDSTP 204
Query: 197 PMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLF--TSDQTLLSDPA 254
++ Q + L GT PG PS+ G+ ++ G F SD L D
Sbjct: 205 QVFDTQFYIETLLKGTT-------QPG-PSL---GFAEELSPFPGEFRMRSDALLARDSR 253
Query: 255 TASQVNQNAKTPKLWKTNFAAAMVKMGQIG 284
TA + + ++ + AAM KM +G
Sbjct: 254 TACRWQSMTSSNEVMGQRYRAAMAKMSVLG 283
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase
Showing A Novel Trp-Tyr Covalent Cross-Link
pdb|1MKQ|A Chain A, Crystal Structure Of The Mutant Variant Of Cytochrome C
Peroxidase In The 'open' Uncross-Linked Form
pdb|1MKR|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase (Plate Like Crystals)
pdb|1ML2|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase With Zn(Ii)-(20-Oxo-Protoporphyrin Ix)
Length = 294
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 82/223 (36%), Gaps = 30/223 (13%)
Query: 68 VNNPSLRGFEVIDNAKAALESVCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDG 125
N+PS G + N LE + K +S D+ + +V+ G +P R G
Sbjct: 77 FNDPSNAGLQ---NGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCG 129
Query: 126 RISLASEALTN---LPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRL 182
R+ + + LP + + F E+V L GAH +G++H N
Sbjct: 130 RVDTPEDTTPDNGRLPDADKDADYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSG 186
Query: 183 YNFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGL 242
Y + + N Y L + + + N + +GY +
Sbjct: 187 YEGPWGAANNVFTNEFYLNLLNEDWKLEKNDAN-------NEQWDSKSGYM--------M 231
Query: 243 FTSDQTLLSDPATASQVNQNAKTPKLWKTNFAAAMVKMGQIGV 285
+D +L+ DP S V + A + +F+ A K+ + G+
Sbjct: 232 LPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGI 274
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 93/262 (35%), Gaps = 34/262 (12%)
Query: 30 GVAAGLVRMHFHDCFVRG-CDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALES 88
G LVR+ +H + G D + T N+PS G + N LE
Sbjct: 38 GYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQ---NGFKFLEP 91
Query: 89 VCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFT 143
+ K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 92 IHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 144 VNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQL 203
+ F E+V L GAH +G++H N Y + + N Y L
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAANNVFTNEKYLNLL 204
Query: 204 KQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNA 263
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 205 NEDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYA 249
Query: 264 KTPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 250 NDQDKFFKDFSKAFEKLLENGI 271
>pdb|3MML|B Chain B, Allophanate Hydrolase Complex From Mycobacterium
Smegmatis, Msmeg0435- Msmeg0436
pdb|3MML|D Chain D, Allophanate Hydrolase Complex From Mycobacterium
Smegmatis, Msmeg0435- Msmeg0436
pdb|3MML|F Chain F, Allophanate Hydrolase Complex From Mycobacterium
Smegmatis, Msmeg0435- Msmeg0436
pdb|3MML|H Chain H, Allophanate Hydrolase Complex From Mycobacterium
Smegmatis, Msmeg0435- Msmeg0436
Length = 228
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 77 EVIDNAKAALESVCKGIVSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN 136
EV+ + E+ G+V DIV AAR + G Y P+ +R G++ + EA+T+
Sbjct: 41 EVLAWTETLREAELLGVV---DIVP-AARTVLVKLAGPRYQAPTRQRLGKLRVRPEAITH 96
Query: 137 LPP 139
PP
Sbjct: 97 QPP 99
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of
Cytochrome C Peroxidase Compound I
Length = 296
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 81/223 (36%), Gaps = 30/223 (13%)
Query: 68 VNNPSLRGFEVIDNAKAALESVCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDG 125
N+PS G + N LE + K +S D+ + +V+ G +P R G
Sbjct: 79 FNDPSNAGLQ---NGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCG 131
Query: 126 RISLASEALTN---LPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRL 182
R+ + + LP + F E+V L GAH +G++H N
Sbjct: 132 RVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSG 188
Query: 183 YNFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGL 242
Y + + N Y L + + + N + +GY +
Sbjct: 189 YEGPWGAANNVFTNEFYLNLLNEDWKLEKNDAN-------NEQWDSKSGYM--------M 233
Query: 243 FTSDQTLLSDPATASQVNQNAKTPKLWKTNFAAAMVKMGQIGV 285
+D +L+ DP S V + A + +F+ A K+ + G+
Sbjct: 234 LPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGI 276
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase
pdb|1DJ5|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase With N-Hydroxyguanidine Bound
Length = 291
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 81/223 (36%), Gaps = 30/223 (13%)
Query: 68 VNNPSLRGFEVIDNAKAALESVCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDG 125
N+PS G + N LE + K +S D+ + +V+ G +P R G
Sbjct: 74 FNDPSNAGLQ---NGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCG 126
Query: 126 RISLASEALTN---LPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRL 182
R+ + + LP + F E+V L GAH +G++H N
Sbjct: 127 RVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSG 183
Query: 183 YNFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGL 242
Y + + N Y L + + + N + +GY +
Sbjct: 184 YEGPWGAANNVFTNEFYLNLLNEDWKLEKNDAN-------NEQWDSKSGYM--------M 228
Query: 243 FTSDQTLLSDPATASQVNQNAKTPKLWKTNFAAAMVKMGQIGV 285
+D +L+ DP S V + A + +F+ A K+ + G+
Sbjct: 229 LPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGI 271
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 81/223 (36%), Gaps = 30/223 (13%)
Query: 68 VNNPSLRGFEVIDNAKAALESVCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDG 125
N+PS G + N LE + K +S D+ + +V+ G +P R G
Sbjct: 79 FNDPSNAGLQ---NGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCG 131
Query: 126 RISLASEALTN---LPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRL 182
R+ + + LP + F E+V L GAH +G++H N
Sbjct: 132 RVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSG 188
Query: 183 YNFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGL 242
Y + + N Y L + + + N + +GY +
Sbjct: 189 YEGPWGAANNVFTNEFYLNLLNEDWKLEKNDAN-------NEQWDSKSGYM--------M 233
Query: 243 FTSDQTLLSDPATASQVNQNAKTPKLWKTNFAAAMVKMGQIGV 285
+D +L+ DP S V + A + +F+ A K+ + G+
Sbjct: 234 LPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGI 276
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 81/223 (36%), Gaps = 30/223 (13%)
Query: 68 VNNPSLRGFEVIDNAKAALESVCKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDG 125
N+PS G + N LE + K +S D+ + +V+ G +P R G
Sbjct: 79 FNDPSNAGLQ---NGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCG 131
Query: 126 RISLASEALTN---LPPPTFTVNQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRL 182
R+ + + LP + F E+V L GAH +G++H N
Sbjct: 132 RVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSG 188
Query: 183 YNFSGTMSQDPSLNPMYAAQLKQQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGL 242
Y + + N Y L + + + N + +GY +
Sbjct: 189 YEGPWGAANNVFTNEFYLNLLNEDWKLEKNDAN-------NEQWDSKSGYM--------M 233
Query: 243 FTSDQTLLSDPATASQVNQNAKTPKLWKTNFAAAMVKMGQIGV 285
+D +L+ DP S V + A + +F+ A K+ + G+
Sbjct: 234 LPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGI 276
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant
Length = 296
Score = 27.7 bits (60), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 91/261 (34%), Gaps = 32/261 (12%)
Query: 30 GVAAGLVRMHFHDCFVRGCDASVLIDSTSSNTAEKDSPVNNPSLRGFEVIDNAKAALESV 89
G LVR+ +H D + T N+P G + N LE +
Sbjct: 43 GYGPVLVRLAWHTSGT--WDKHDNTGGSYGGTYRFKKEFNDPWNAGLQ---NGFKFLEPI 97
Query: 90 CKGI--VSCADIVAFAARDSVEISGGLGYDVPSGRRDGRISLASEALTN---LPPPTFTV 144
K +S D+ + +V+ G +P R GR+ + + LP
Sbjct: 98 HKEFPWISSGDLFSLGGVTAVQEMQGP--KIP--WRCGRVDTPEDTTPDNGRLPDADKDA 153
Query: 145 NQLTQSFANKGFTQEEMVTLSGAHTIGRSHCTSFSNRLYNFSGTMSQDPSLNPMYAAQLK 204
+ + F E+V L GAH +G++H N Y + + N Y L
Sbjct: 154 DYVRTFFQRLNMNDREVVALMGAHALGKTHL---KNSGYEGPWGAANNVFTNEFYLNLLN 210
Query: 205 QQCLQDGTNPNLVVPMNPGSPSIADTGYYIDILRNRGLFTSDQTLLSDPATASQVNQNAK 264
+ + + N + +GY + +D +L+ DP S V + A
Sbjct: 211 EDWKLEKNDAN-------NEQWDSKSGYM--------MLPTDYSLIQDPKYLSIVKEYAN 255
Query: 265 TPKLWKTNFAAAMVKMGQIGV 285
+ +F+ A K+ + G+
Sbjct: 256 DQDKFFKDFSKAFEKLLENGI 276
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.130 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,657,035
Number of Sequences: 62578
Number of extensions: 340660
Number of successful extensions: 940
Number of sequences better than 100.0: 114
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 806
Number of HSP's gapped (non-prelim): 140
length of query: 301
length of database: 14,973,337
effective HSP length: 98
effective length of query: 203
effective length of database: 8,840,693
effective search space: 1794660679
effective search space used: 1794660679
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)