BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041703
(146 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42849|UMEC_ARMRU Umecyanin OS=Armoracia rusticana PE=1 SV=1
Length = 115
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%)
Query: 4 GDSVWSIPPTTNFYNDWSSSHLFRIGDSIVFDFETELYNLMQVTALDYQTCKANNPIKVL 63
GD W P FY W++ FR+GD + FDF ++++ VT + CK NPI +
Sbjct: 7 GDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHM 66
Query: 64 NSGPATIVLNEQGVFYYLCNLSNYCDLGQKISIIV 98
+ P I+LN G YY+C + ++C +GQK+SI V
Sbjct: 67 TTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINV 101
>sp|Q07488|BCB1_ARATH Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2
Length = 196
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 1 YWVGDSV-WSIPPTTNFYNDWSSSHLFRIGDSIVFDFETELYNLMQVTALDYQTCKANNP 59
Y VGD W+ P FY W++ FR+GD + FDF +++ V+ ++ C+ P
Sbjct: 25 YDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKP 84
Query: 60 IKVLNSGPATIVLNEQGVFYYLCNLSNYCDLGQKISIIVHGKNSFPPAPSPAAAPVEPLL 119
I + P I+LN G Y++C + ++C GQK+SI V + A A A P
Sbjct: 85 ISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAGATGGATPGAGATPAPGS 144
Query: 120 TP 121
TP
Sbjct: 145 TP 146
>sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060
PE=1 SV=2
Length = 182
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 8 WSIPPTTNF-YNDWSSSHLFRIGDSIVFDFETELYNLMQVTALDYQTCKANNPIKVLNSG 66
W IPP++++ + +W+ F++GD IVF +E+ ++++VT Y +C NP+ G
Sbjct: 40 WKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDG 99
Query: 67 PATIVLNEQGVFYYLCNLSNYCDLGQKISIIVHG--KNSFPPAPSPAAAPVEPLLTP 121
+ L+ G FY++ + +C+ GQK+S++V + PAPSP P L P
Sbjct: 100 ETKVKLDRSGPFYFISGANGHCEKGQKLSLVVISPRHSVISPAPSPVEFEDGPALAP 156
>sp|P00302|STEL_TOXVR Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1
Length = 107
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 1 YWVGDSV-WSIPPTTNFYND------WSSSHLFRIGDSIVFDFETELYNLMQVTALDYQT 53
Y VGDS W +P F+ D W+S+ F IGD +VF ++ +N+ +VT +YQ+
Sbjct: 3 YTVGDSAGWKVP----FFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQS 58
Query: 54 CKANNPIKVLNSGPATIVLNEQGVFYYLCNLSNYCDLGQKISIIV 98
C PI N+G I L G YY+C + +CDLGQK+ I V
Sbjct: 59 CNDTTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINV 103
>sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1
Length = 108
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%)
Query: 3 VGDSVWSIPPTTNFYNDWSSSHLFRIGDSIVFDFETELYNLMQVTALDYQTCKANNPIKV 62
VGDS Y W+SS+ F +GDS++F++ + +N++QV +++C +++P
Sbjct: 6 VGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAAS 65
Query: 63 LNSGPATIVLNEQGVFYYLCNLSNYCDLGQKISIIV 98
SG +I L G FY+LC + +C LGQK+ I V
Sbjct: 66 YTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101
>sp|P93328|NO16_MEDTR Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1
Length = 180
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 1 YWVGDS--VWSIP-PTTNFYNDWSSSHLFRIGDSIVFDFETELYNLMQVTALDYQTCKAN 57
Y +GDS W +P P+ + W+S+H F +GD+I+F+++ E ++ +V DY C N
Sbjct: 27 YLIGDSHNSWKVPLPSRRAFARWASAHEFTVGDTILFEYDNETESVHEVNEHDYIMCHTN 86
Query: 58 NPIKVLNSGPATIVLNEQGVFYYLCNLSNYCDLGQKISIIVHGKNSF 104
+ G +VL++ GV++++ +C +G K++++V K+
Sbjct: 87 GEHVEHHDGNTKVVLDKIGVYHFISGTKRHCKMGLKLAVVVQNKHDL 133
>sp|P29602|CPC_CUCSA Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3
Length = 137
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 1 YWVGDSV-WSIPPTTNFYNDWSSSHLFRIGDSIVFDFETELYNLMQV-TALDYQTCK-AN 57
+ VGD+ WS+P + NFY+ W++ FR+GDS+ F+F +N+ ++ T + C N
Sbjct: 5 HIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVN 64
Query: 58 NPIKVLNSGPATIVLNEQGVFYYLCNLSNYCDLGQKISIIVHGKNS 103
+ V + P L+E G+ Y++C + +C GQK+SI V N+
Sbjct: 65 SDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANA 110
>sp|Q5JNJ5|ENL1_ORYSJ Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica
GN=ENODL1 PE=1 SV=1
Length = 237
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 9/123 (7%)
Query: 1 YWVGDSVWSIPPTTNFYNDWSSSHLFRIGDSIVFDFETELY-NLMQVTALDYQTCKANNP 59
Y G W + P +F N W+ + F++ D+IVF + E+ +++QVT D+ TC NP
Sbjct: 32 YAGGRDGWVVDPAESF-NYWAERNRFQVNDTIVFLHDDEVGGSVLQVTEGDFDTCSTGNP 90
Query: 60 IKVLN---SGPATIVLNEQGVFYYLCNLSNYCDLGQKISIIVHG----KNSFPPAPSPAA 112
++ L +G + + G F+++ + C GQK+ IIV K S P P+ AA
Sbjct: 91 VQRLEDVAAGRSVFRFDRSGPFFFISGDEDRCQKGQKLYIIVMAVRPTKPSEAPEPAGAA 150
Query: 113 APV 115
PV
Sbjct: 151 GPV 153
>sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520
PE=1 SV=1
Length = 349
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 4 GDSVWSIPPTTNFYNDWSSSHLFRIGDSIVFDFETELYNLMQVTALDYQTCKANNPIKVL 63
G W P N Y WS + F + D++ F + ++++V DY C NPIK +
Sbjct: 35 GSGAWVTNPPEN-YESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRV 93
Query: 64 NSGPATIVLNEQGVFYYLCNLSNYCDLGQKISIIV 98
+ G + I L+ G FY++ + C GQK++++V
Sbjct: 94 DDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVV 128
>sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum PE=2 SV=1
Length = 189
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 1 YWVGD-SVWSIPPTTNFYNDWSSSHLFRIGDSIVFDFETELYNLMQVTALDYQTCKANNP 59
Y VGD S W I Y+ W+S F +GDS+VF++ + + +V DY++C + N
Sbjct: 27 YTVGDTSGWVIGGD---YSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNS 83
Query: 60 IKVLNSGPATIVLNEQGVFYYLCNLSNYCDLGQKISIIV 98
I ++G TI L + G Y++C + + G K+SI V
Sbjct: 84 ISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKV 122
>sp|P93329|NO20_MEDTR Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1
Length = 268
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 1 YWVGDS--VWSIP-PTTNFYNDWSSSHLFRIGDSIVFDFETELYNLMQVTALDYQTCKAN 57
Y VGDS W P PT + W+S++ F +GD+I F + + ++ +V DY C
Sbjct: 27 YLVGDSENSWKFPLPTRHALTRWASNYQFIVGDTITFQYNNKTESVHEVEEEDYDRCGIR 86
Query: 58 NPIKVLNSGPATIVLNEQGVFYYLCNLSNYCDLGQKISIIV 98
G +VL + G+ +++ +C LG K++++V
Sbjct: 87 GEHVDHYDGNTMVVLKKTGIHHFISGKKRHCRLGLKLAVVV 127
>sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090
PE=1 SV=2
Length = 186
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 6 SVWSIPPT-TNFYNDWSSSHLFRIGDSIVFDFETELYNLMQVTALDYQTCKANNPIKVLN 64
S W IP + + N W+ S FR+GD++V+ ++ E +++QVT Y C NP +
Sbjct: 33 SSWKIPSSPSESLNKWAESLRFRVGDTLVWKYDEEKDSVLQVTKDAYINCNTTNPAANYS 92
Query: 65 SGPATIVLNEQGVFYYLCNLSNYCDLGQKISIIV 98
+G + L G ++++ + C G+K+ I+V
Sbjct: 93 NGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVV 126
>sp|P60496|BABL_LILLO Chemocyanin OS=Lilium longiflorum PE=1 SV=1
Length = 126
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 1 YWVGDSV-WSIPPTTNFYNDWSSSHLFRIGDSIVFDFETELYNLMQVTALDYQTCKANNP 59
Y VGD W+ + W + FR GD +VF + ++N++ V A Y++C A+
Sbjct: 33 YTVGDGGGWTFGTS-----GWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTASPG 87
Query: 60 IKVLNSGPATIVLNEQGVFYYLCNLSNYCDLGQKISI 96
+V SG I L+ +G Y++C++ +C G KI++
Sbjct: 88 SRVFKSGDDRITLS-RGTNYFICSVPGHCQGGLKIAV 123
>sp|Q02917|NO552_SOYBN Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1
Length = 187
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 1 YWVGDS--VWSIPPTT-NFYNDWSSSHLFRIGDSIVFDFETELYNLMQVTALDYQTCKAN 57
Y VG S W P + + + W++SH F+IGD+++F +E ++ + DY+ C
Sbjct: 29 YVVGGSEKSWKFPLSKPDSLSHWANSHRFKIGDTLIFKYEKRTESVHEGNETDYEGCNTV 88
Query: 58 NPIK-VLNSGPATIVLNEQGVFYYLCNLSNYCDLGQKISIIV 98
V N G ++L + G +++ ++C +G K++++V
Sbjct: 89 GKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLV 130
>sp|Q39131|LAML_ARATH Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1
Length = 172
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 17 YNDWSSSHLFRIGDSIVFDFETELYNLMQVTALDYQTCKANNPIKVLNSGPAT-IVLNEQ 75
Y W+ F +GD + F F+ +N+++V DY+ C A++PI+ G IV Q
Sbjct: 43 YTIWAQGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQ 102
Query: 76 GVFYYLCNLSNYCDLGQKISIIVHGKNSFPPAPSPAAAPVE 116
YYL + C G K+S+ V PP P +APV+
Sbjct: 103 TKHYYLLDGKGGCYGGMKLSVKVE---KLPPPPK--SAPVK 138
>sp|Q8LG89|BABL_ARATH Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=1 SV=2
Length = 129
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 1 YWVGDS-VWSIPPTTNFYNDWSSSHLFRIGDSIVFDFETELYNLMQVTALDYQTCKANNP 59
Y VGDS +W+ W FR GD +VF++ ++N+++V + Y CK
Sbjct: 36 YTVGDSGIWTFNAV-----GWPKGKHFRAGDVLVFNYNPRMHNVVKVDSGSYNNCKTPTG 90
Query: 60 IKVLNSGPATIVLNEQGVFYYLCNLSNYCDLGQKISI 96
K SG I L +G +++CN N+C+ KI++
Sbjct: 91 AKPYTSGKDRITL-SKGQNFFICNFPNHCESDMKIAV 126
>sp|P00303|BABL_CUCSA Basic blue protein OS=Cucumis sativus PE=1 SV=1
Length = 96
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 20 WSSSHLFRIGDSIVFDFETELYNLMQVTALDYQTCKANNPIKVLNSGPATIVLNEQGVFY 79
W FR GD ++F++ ++N++ V + TC KV SG I L +G Y
Sbjct: 18 WPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKL-PKGQSY 76
Query: 80 YLCNLSNYCDLGQKISI 96
++CN +C G KI++
Sbjct: 77 FICNFPGHCQSGMKIAV 93
>sp|O80517|BCB2_ARATH Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1
Length = 202
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 17 YNDWSSSHLFRIGDSIVFDFETELYNLMQVTALDYQTCKANNPIKVLNSGPATIVLNEQG 76
Y+ W++ FR+GD + F + + + + V Y C A++ + + G I L G
Sbjct: 42 YSGWATGKTFRVGDILEFKYGSS-HTVDVVDKAGYDGCDASSSTENHSDGDTKIDLKTVG 100
Query: 77 VFYYLCNLSNYC--DLGQKISIIV 98
+ Y++C+ +C + G K+++ V
Sbjct: 101 INYFICSTPGHCRTNGGMKLAVNV 124
>sp|Q0CHV5|IML1_ASPTN Vacuolar membrane-associated protein iml1 OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=iml1 PE=3 SV=1
Length = 1830
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 12 PTTNFY----NDWSSSHLFRIGDSIVFDFETELYNLMQVTALDYQTCKANNPIKVLNSGP 67
PT +FY ND +S H I D + DF T L ++ + D KAN N+ P
Sbjct: 353 PTRDFYRVVVNDMASGHWTTILDELKKDFRTFLRDVSTLKVDDAPVAKANGSASAPNARP 412
Query: 68 ATIV 71
A I
Sbjct: 413 AVIA 416
>sp|Q05544|NO551_SOYBN Early nodulin-55-1 (Fragment) OS=Glycine max GN=ENOD55-1 PE=2 SV=1
Length = 137
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 34 FDFETELYNLMQVTALDYQTCKANNPIKVL-NSGPATIVLNEQGVFYYLCNLSNYCDLGQ 92
+D TE ++ +V DY+ C VL N G ++L + G +++ ++C +G
Sbjct: 2 YDERTE--SVHEVNETDYEQCNTVGKEHVLFNDGNTKVMLTKSGFRHFISGNQSHCQMGL 59
Query: 93 KISIIVHGKNS 103
K+ ++V N+
Sbjct: 60 KLMVVVMSNNT 70
>sp|P00304|MPAA3_AMBEL Pollen allergen Amb a 3 OS=Ambrosia artemisiifolia var. elatior
PE=1 SV=2
Length = 101
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 8 WSIPPTTNFYNDWSSSHLFRIGDSIVFDFETELYNLMQVTALD-YQTCKANNPIKVLNSG 66
W + Y WS+ F+ D + F+F T ++ +V + Y C +PI++ G
Sbjct: 14 WKLQSDPRAYALWSARQQFKTTDVLWFNFTTGEDSVAEVWREEAYHACDIKDPIRLEPGG 73
Query: 67 PATIVLNEQGVFYYLCN 83
P L G +++C
Sbjct: 74 PDRFTLLTPGS-HFICT 89
>sp|Q9S2C0|PKSC_STRCO Serine/threonine-protein kinase PksC OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=pksC PE=3 SV=1
Length = 556
Score = 31.6 bits (70), Expect = 1.8, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 100 GKNSFPPAPSPAAAPVEPLLTPLFAPSSSPEPSTDGWNVPDSPLPA 145
G FPP AP P+ TP + P+ SP P+ G P + PA
Sbjct: 313 GSAVFPPVGQGTPAPTGPVQTP-YQPTPSPGPNPYGTPAPAAHSPA 357
>sp|Q8H2D0|REM7_ARATH B3 domain-containing protein REM7 OS=Arabidopsis thaliana GN=REM7
PE=2 SV=1
Length = 251
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 17 YNDWSSSHLFRIGDSIVFDFETELYNLMQVTALDYQTCK 55
+ +++S+H FR+GD IVF E L + VTAL C+
Sbjct: 70 WKEFASAHDFRVGDIIVFRHEGSL--VFHVTALGPSCCE 106
>sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=3
Length = 3230
Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 97 IVHGKNSFPPAPSPAAAPVEPLLTPLFAPSSSPEPSTDGWNVPD-SPLPAP 146
+VH + A +P AAP+ + +PL PSS P P++ +P+ SPL +P
Sbjct: 1377 LVHSPSPEVSASAPGAAPLT-ISSPLHVPSSLPGPASSPMPIPNSSPLASP 1426
>sp|O15054|KDM6B_HUMAN Lysine-specific demethylase 6B OS=Homo sapiens GN=KDM6B PE=1 SV=4
Length = 1643
Score = 30.4 bits (67), Expect = 4.1, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 102 NSFPPAPSPAAAPVEPLLTPLF-----APSSSPEPSTDG-WNVPDSPLP 144
+ P PSPA P +P L PL AP SS +T G + P+SP P
Sbjct: 582 DPLPRPPSPAQNPQDPPLVPLTLALPPAPPSSCHQNTSGSFRRPESPRP 630
>sp|Q5YDB6|CPL1_ARATH RNA polymerase II C-terminal domain phosphatase-like 1
OS=Arabidopsis thaliana GN=CPL1 PE=1 SV=1
Length = 967
Score = 30.4 bits (67), Expect = 4.2, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 89 DLGQKISIIVHGKNSFPPAPSPAAAPVEPLLTPLFAPSSSPEPSTDGW 136
D +++ I+ HG+++ PAPS + P P P+ AP S + S +GW
Sbjct: 571 DTRRRLLILQHGQDTRDPAPSEPSFPQRP---PVQAPPSHVQ-SRNGW 614
>sp|Q11053|PKNH_MYCTU Serine/threonine-protein kinase PknH OS=Mycobacterium tuberculosis
GN=pknH PE=1 SV=2
Length = 626
Score = 30.0 bits (66), Expect = 5.1, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 12/54 (22%)
Query: 105 PPA-PSPAAAPVEPLLTPLFAPSSSPEPST-----------DGWNVPDSPLPAP 146
PPA P PA P P +AP+S P P++ GW P S P+P
Sbjct: 338 PPAQPGPAGQRPGPTGQPSWAPNSGPMPASGPTPTPQYYQGGGWGAPPSGGPSP 391
>sp|P18302|DREB_CHICK Drebrin OS=Gallus gallus GN=DBN1 PE=2 SV=4
Length = 652
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Query: 106 PAPSPAAAPVEPLLTP--------LFAPSSSPEPSTDGWNVPDSPLPAP 146
P+P+PAA+ +P+ TP L+ + +T W +PD+P P
Sbjct: 466 PSPAPAASEPQPVETPGVAEPLIELWQSDGAAPAATSTWPLPDTPAGPP 514
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,699,885
Number of Sequences: 539616
Number of extensions: 2733763
Number of successful extensions: 13490
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 143
Number of HSP's that attempted gapping in prelim test: 12469
Number of HSP's gapped (non-prelim): 1106
length of query: 146
length of database: 191,569,459
effective HSP length: 106
effective length of query: 40
effective length of database: 134,370,163
effective search space: 5374806520
effective search space used: 5374806520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)