BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041711
(210 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 157 RCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCRFTLP 203
+C +C++EF +G +V + C HV H+ C+L WL N+CP CRF LP
Sbjct: 215 QCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELP 261
>sp|P87139|YDM9_SCHPO Uncharacterized RING finger protein C57A7.09 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC57A7.09 PE=1 SV=1
Length = 372
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 142 IAILEEGSGLILGQERCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNN-CPTCRF 200
+ +++E + CVICLE F++GD+V++L C H HR CI KW+V + CPTC
Sbjct: 305 VPLMDESTRRATFGVECVICLESFTKGDKVVALPCKHEFHRPCIAKWIVDYRHACPTCNT 364
Query: 201 TLP 203
+P
Sbjct: 365 EVP 367
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 157 RCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCRFTLP 203
+C +C+++F EG E + C H++H+ C+L WL N+CP CR LP
Sbjct: 223 QCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELP 269
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 157 RCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCRFTLP 203
+C +CL EF EG+ V L C H+ H CIL WL N+CP CR LP
Sbjct: 78 KCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHELP 124
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 157 RCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCRFTLP 203
+C +CL EF EG+ V L C H+ H CIL WL N+CP CR LP
Sbjct: 78 KCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNSCPLCRHELP 124
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 56.6 bits (135), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 158 CVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCR 199
C +C+ E++EG+++ L CSH +H HCI +WL + CP CR
Sbjct: 585 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 626
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 158 CVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCR 199
C +C+ E++EG+++ L CSH +H HCI +WL + CP CR
Sbjct: 703 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICR 744
>sp|Q68DV7|RNF43_HUMAN E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1
SV=1
Length = 783
Score = 56.2 bits (134), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 158 CVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCRFTL 202
C ICLEEFSEG E+ + C H HR+C+ WL CP C F +
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNI 316
>sp|Q5NCP0|RNF43_MOUSE E3 ubiquitin-protein ligase RNF43 OS=Mus musculus GN=Rnf43 PE=2
SV=1
Length = 784
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 26/45 (57%)
Query: 158 CVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCRFTL 202
C ICLEEFSEG E+ + C H HR C+ WL CP C F +
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLYQHRTCPLCMFNI 316
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 158 CVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCR 199
C +C+ E++EG+++ L CSH +H HCI +WL + CP CR
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 587
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 158 CVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCR 199
C +C+ E++EG+++ L CSH +H HCI +WL + CP CR
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICR 609
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 157 RCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCRFTLP 203
+C +CL EF E + V + C H+ H CIL WL N+CP CR LP
Sbjct: 78 KCPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKTNSCPLCRLELP 124
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 158 CVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCR 199
C +C+ E++EG+++ L CSH +H HCI +WL + CP CR
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 611
>sp|P87237|YC0C_SCHPO Uncharacterized RING finger protein C4G3.12c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC4G3.12c PE=4 SV=1
Length = 821
Score = 54.7 bits (130), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 156 ERCVICLEEFSEGDEVISLQ-CSHVHHRHCILKWLVTGNN-CPTCR 199
+ C+ICLE ++ GD LQ C H H+ CI +WL TGNN CP CR
Sbjct: 764 DSCLICLETYTNGDICRKLQACKHFFHQACIDQWLTTGNNSCPLCR 809
>sp|Q9CY62|RN181_MOUSE E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2
SV=1
Length = 165
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 157 RCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCRFTLP 203
+C +CL EF + VI + C H+ H +CIL WL N+CP CR LP
Sbjct: 87 KCPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELP 133
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 136 VIETWEIAILEEGSGLILGQERCVICLEEFSEGDEVISL--QCSHVHHRHCILKWLVTGN 193
I + + ++G G+I G E C +CL EF E DE + L +CSH H +CI WL++
Sbjct: 114 AINSITVVGFKKGEGIIDGTE-CSVCLNEFEE-DESLRLLPKCSHAFHLNCIDTWLLSHK 171
Query: 194 NCPTCR 199
NCP CR
Sbjct: 172 NCPLCR 177
>sp|Q9ZT49|ATL45_ARATH RING-H2 finger protein ATL45 OS=Arabidopsis thaliana GN=ATL45 PE=2
SV=1
Length = 200
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 158 CVICLEEFSEGDEVISLQ-CSHVHHRHCILKWLVTGNNCPTCRFTL 202
C IC+ EFSEG+E+ L CSH H CI KWL + ++CP+CR L
Sbjct: 113 CAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRIL 158
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 132 EVVRVIETWEIAILEEGSGLILGQERCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVT 191
E ++ + T +I GSGL C +C E+++ G+ V L C+H+ H CI+ WL
Sbjct: 206 EKIQALPTIQITEEHVGSGL-----ECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQ 260
Query: 192 GNNCPTCRFTLPCTTTGSD 210
+ CP CR +L T ++
Sbjct: 261 HDTCPVCRKSLSGQNTATN 279
>sp|Q0V9R0|RN111_XENTR E3 ubiquitin-protein ligase arkadia OS=Xenopus tropicalis GN=rnf111
PE=2 SV=1
Length = 954
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 157 RCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCR 199
+C ICL EG++V L C H+ H+ C+ +WL+T CP CR
Sbjct: 901 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 943
>sp|Q66J97|R111C_XENLA E3 ubiquitin-protein ligase arkadia-C OS=Xenopus laevis GN=rnf111-c
PE=2 SV=1
Length = 967
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 157 RCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCR 199
+C ICL EG++V L C H+ H+ C+ +WL+T CP CR
Sbjct: 914 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 956
>sp|Q6NRV8|R111B_XENLA E3 ubiquitin-protein ligase arkadia-B OS=Xenopus laevis GN=rnf111-b
PE=2 SV=1
Length = 959
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 157 RCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCR 199
+C ICL EG++V L C H+ H+ C+ +WL+T CP CR
Sbjct: 906 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 948
>sp|Q90ZT7|R111A_XENLA E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis
GN=rnf111-a PE=2 SV=1
Length = 923
Score = 52.8 bits (125), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 157 RCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCR 199
+C ICL EG++V L C H+ H+ C+ +WL+T CP CR
Sbjct: 870 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 912
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 141 EIAILEEGSGLI-LGQERCVICLEEFSEGDEVISL-QCSHVHHRHCILKWLVTGNNCPTC 198
+I + GSG+I + C+ICL +F +G++V L +C+H H CI WL++ ++CPTC
Sbjct: 96 QIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTC 155
Query: 199 RFTL 202
R +L
Sbjct: 156 RQSL 159
>sp|Q99ML9|RN111_MOUSE E3 ubiquitin-protein ligase Arkadia OS=Mus musculus GN=Rnf111 PE=1
SV=1
Length = 989
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 157 RCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCR 199
+C ICL EG++V L C H+ H+ C+ +WL+T CP CR
Sbjct: 936 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 978
>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
SV=3
Length = 936
Score = 52.0 bits (123), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 158 CVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCRFTL 202
C ICLE++ +G+E+ + C+H HR C+ WL+ + CP CR +
Sbjct: 293 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 337
>sp|Q8N7C7|RN148_HUMAN RING finger protein 148 OS=Homo sapiens GN=RNF148 PE=2 SV=2
Length = 305
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 129 VQLEVVRVIETWEIAILEEGSG-LILGQERCVICLEEFSEGDEVISLQCSHVHHRHCILK 187
++ +V + I+ ++ +L+EG L L ++ CV+C + + D V L C H H+ CI
Sbjct: 228 IKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDP 287
Query: 188 WLVTGNNCPTCR 199
WL+ CP C+
Sbjct: 288 WLLAHRTCPMCK 299
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 52.0 bits (123), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 158 CVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCRFTL 202
C ICLE++ +G+E+ + C+H HR C+ WL+ + CP CR +
Sbjct: 290 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 334
>sp|O00237|RN103_HUMAN E3 ubiquitin-protein ligase RNF103 OS=Homo sapiens GN=RNF103 PE=1
SV=1
Length = 685
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 158 CVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNN-CPTCRF 200
CV+CLE F G ++ L C HV H++CI+ WL G + CP CR+
Sbjct: 621 CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRW 664
>sp|Q9EPZ8|RN103_RAT E3 ubiquitin-protein ligase RNF103 OS=Rattus norvegicus GN=Rnf103
PE=2 SV=1
Length = 682
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 158 CVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNN-CPTCRF 200
CV+CLE F G ++ L C HV H++CI+ WL G + CP CR+
Sbjct: 618 CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRW 661
>sp|Q08D68|ZNRF3_XENTR E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis GN=znrf3
PE=2 SV=1
Length = 853
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 158 CVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCRFTL 202
C ICLE++ +G+E+ + C+H H+ C+ WL+ + CP CR +
Sbjct: 266 CAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNI 310
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 158 CVICLEEFSEGDEVISLQ-CSHVHHRHCILKWLVTGNNCPTCRFTL 202
C +CL EFS+ D++ L CSH H HCI WL++ + CP CR +L
Sbjct: 207 CAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSL 252
>sp|Q9SPL2|CIP8_ARATH E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8
PE=1 SV=1
Length = 334
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 133 VVRVIETWEIAILEEGSGLILGQERCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTG 192
+ +ET+E++ EG +++ C +C + G+ L C H +H CI+ WL T
Sbjct: 237 AIEALETFEVSS-SEGEMVMV----CAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTR 291
Query: 193 NNCPTCRFTL 202
N+CP CRF L
Sbjct: 292 NSCPVCRFQL 301
>sp|Q9R1W3|RN103_MOUSE E3 ubiquitin-protein ligase RNF103 OS=Mus musculus GN=Rnf103 PE=2
SV=2
Length = 683
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 158 CVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNN-CPTCRF 200
CV+CLE F G ++ L C HV H++CI+ WL G + CP CR+
Sbjct: 619 CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRW 662
>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
SV=1
Length = 159
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 138 ETWEIAILEEGSGLI-LGQERCVICLEEFSEGDEVISLQ-CSHVHHRHCILKWLVTGNNC 195
E + + E GSG + + C ICL EF++G+ V L C+H H CI WLV+ ++C
Sbjct: 84 ELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSC 143
Query: 196 PTCRFTL 202
P CR +L
Sbjct: 144 PNCRHSL 150
>sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2
SV=1
Length = 784
Score = 51.2 bits (121), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 158 CVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCRFTL 202
C ICLE++ +G+E+ + C+H H+ C+ WL+ + CP CR +
Sbjct: 202 CAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNI 246
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 132 EVVRVIETWEIAILEEGSGLILGQERCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVT 191
E ++ + T + GSGL C +C E+++ G+ V L C+H+ H CI+ WL
Sbjct: 210 EKIQALPTVPVTEEHVGSGL-----ECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQ 264
Query: 192 GNNCPTCRFTLPCTTTGSD 210
++CP CR +L T ++
Sbjct: 265 HDSCPVCRKSLTGQNTATN 283
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 132 EVVRVIETWEIAILEEGSGLILGQERCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVT 191
E ++ + T +I GSGL C +C E+++ G+ V L C+H+ H CI+ WL
Sbjct: 207 EKIQALPTIQITEEHVGSGL-----ECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQ 261
Query: 192 GNNCPTCRFTLPCTTTGSD 210
+ CP CR +L T ++
Sbjct: 262 HDTCPVCRKSLSGQNTATN 280
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 136 VIETWEIAILEEGSGLILGQE--RCVICLEEFSEGDEVISLQ--CSHVHHRHCILKWLVT 191
VI ++ + + GL +G+ C ICL EF E +E + L CSH H CI WL +
Sbjct: 104 VINSFPSFLYSQVKGLKIGKGGVECAICLNEF-EDEETLRLMPPCSHAFHASCIDVWLSS 162
Query: 192 GNNCPTCRFTLPCTTTGSD 210
+ CP CR +LP GSD
Sbjct: 163 RSTCPVCRASLP-PKPGSD 180
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 132 EVVRVIETWEIAILEEGSGLILGQERCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVT 191
E ++ + T + GSGL C +C +++ G+ V L C+H+ H CI+ WL
Sbjct: 211 EKIQALPTVPVTEEHVGSGL-----ECPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQ 265
Query: 192 GNNCPTCRFTLPCTTTGSD 210
++CP CR +L T +D
Sbjct: 266 HDSCPVCRKSLTGQNTATD 284
>sp|Q9FGJ6|ATL79_ARATH RING-H2 finger protein ATL79 OS=Arabidopsis thaliana GN=ATL79 PE=2
SV=1
Length = 166
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 151 LILGQERCVICLEEFSEGDEVISL-QCSHVHHRHCILKWLVTGNNCPTCRFTL 202
L + C ICL EF +G+ + L +C H H CI KWL T ++CPTCR ++
Sbjct: 100 LAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTSI 152
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 142 IAILEEGSGLILGQERCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCRFT 201
I I EE G L C +C E+++ G+ V L C+H+ H CI+ WL + CP CR +
Sbjct: 215 IQITEEHVGFGL---ECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKS 271
Query: 202 LPCTTTGSD 210
L T ++
Sbjct: 272 LSGQNTATN 280
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 138 ETWEIAILEEGSGLILGQERCVICLEEFSEGDEVISLQ-CSHVHHRHCILKWLVTGNNCP 196
E+ A EEG C ICL +F++G+E+ L C H H CI KWLV+ ++CP
Sbjct: 87 ESTSGAAAEEGD-----STECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCP 141
Query: 197 TCRFTL 202
+CR L
Sbjct: 142 SCRRIL 147
>sp|Q9P7E1|YOF7_SCHPO Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBP4H10.07 PE=1 SV=1
Length = 583
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 156 ERCVICLEEFSEGDEVISL-QCSHVHHRHCILKWLVTG-NNCPTCR 199
ERC++CL F DE L QC+H HR CI +WL + N+CP CR
Sbjct: 523 ERCLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSSQNSCPLCR 568
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 158 CVICLEEFSEGDEVISL-QCSHVHHRHCILKWLVTGNNCPTCRFTLPCTTTG 208
C +CL EFS+G+ + L +CSH H+ CI WL + +NCP CR + T G
Sbjct: 157 CSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITFVTVG 208
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 123 SLVAVGVQLEVVRVIETW---EIAILEEGSGLILGQERCVICLEEFSEGDEVISL--QCS 177
+ VA G+ E + T+ E+ + G G + C ICL EF E DE + L +C
Sbjct: 90 ATVARGLDAETIETFPTFVYSEVKTQKIGKGAL----ECAICLNEF-EDDETLRLLPKCD 144
Query: 178 HVHHRHCILKWLVTGNNCPTCRFTL 202
HV H HCI WL CP CR L
Sbjct: 145 HVFHPHCIGAWLQGHVTCPVCRTNL 169
>sp|A5WWA0|ZNRF3_DANRE E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=3 SV=2
Length = 868
Score = 50.1 bits (118), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 158 CVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCRFTL 202
C ICLE++ +G+E+ + C+H H+ C+ WL+ + CP CR +
Sbjct: 267 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNI 311
>sp|Q8GUU2|RIE1_ARATH E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1
PE=2 SV=1
Length = 359
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 149 SGLILGQER--------CVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCRF 200
+GL L ER C ICL + +G E+ +L C+H H CI+KWL CP C++
Sbjct: 290 NGLCLATERTLLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKY 349
Query: 201 TLPCTTT 207
+ TT
Sbjct: 350 NILKGTT 356
>sp|Q8L649|BB_ARATH E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1
SV=1
Length = 248
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 156 ERCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCR 199
ERCVIC ++ G+ ++L C HV+H CI KWL CP C
Sbjct: 195 ERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCN 238
>sp|Q6ZNA4|RN111_HUMAN E3 ubiquitin-protein ligase Arkadia OS=Homo sapiens GN=RNF111 PE=1
SV=3
Length = 994
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 157 RCVICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCRFTL 202
+C ICL EG++V L C H+ H+ C+ +WL+T CP CR +
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 986
>sp|Q8NG27|PJA1_HUMAN E3 ubiquitin-protein ligase Praja-1 OS=Homo sapiens GN=PJA1 PE=1
SV=2
Length = 643
Score = 50.1 bits (118), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 141 EIAILEEGSGLILGQERCV-ICLEEFSEGDEVISLQCSHVHHRHCILKWLVTGNNCPTCR 199
EI + E+ + GQE C IC E+ +G+ L C H H+ C+ WL CP CR
Sbjct: 579 EILVTEDHGAV--GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 636
Query: 200 FTLP 203
P
Sbjct: 637 CMFP 640
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,058,474
Number of Sequences: 539616
Number of extensions: 3445393
Number of successful extensions: 7589
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 183
Number of HSP's that attempted gapping in prelim test: 7158
Number of HSP's gapped (non-prelim): 547
length of query: 210
length of database: 191,569,459
effective HSP length: 112
effective length of query: 98
effective length of database: 131,132,467
effective search space: 12850981766
effective search space used: 12850981766
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)