BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>041712
MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGN
PYHRGCENEAQCRGPGGQNNN

High Scoring Gene Products

Symbol, full name Information P value
RALFL20
RALF-like 20
protein from Arabidopsis thaliana 1.3e-06
AT2G32885 protein from Arabidopsis thaliana 7.0e-06
RALFL28
ralf-like 28
protein from Arabidopsis thaliana 3.0e-05
RALFL9
ralf-like 9
protein from Arabidopsis thaliana 5.0e-05
RALFL7
RALF-like 7
protein from Arabidopsis thaliana 0.00027
RALFL15
RALF-like 15
protein from Arabidopsis thaliana 0.00057

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041712
        (81 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:4010713678 - symbol:RALFL20 "RALF-like 20" spe...   111  1.3e-06   1
TAIR|locus:4010713671 - symbol:AT2G32885 species:3702 "Ar...   104  7.0e-06   1
TAIR|locus:2123091 - symbol:RALFL28 "ralf-like 28" specie...    98  3.0e-05   1
TAIR|locus:505006196 - symbol:RALFL9 "ralf-like 9" specie...    96  5.0e-05   1
TAIR|locus:4010713569 - symbol:RALFL7 "RALF-like 7" speci...    89  0.00027   1
TAIR|locus:4010713645 - symbol:RALFL15 "RALF-like 15" spe...    86  0.00057   1


>TAIR|locus:4010713678 [details] [associations]
            symbol:RALFL20 "RALF-like 20" species:3702
            "Arabidopsis thaliana" [GO:0005576 "extracellular region"
            evidence=ISM] [GO:0004871 "signal transducer activity"
            evidence=TAS] [GO:0007267 "cell-cell signaling" evidence=ISS]
            [GO:0048046 "apoplast" evidence=ISS] EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0048046 GO:GO:0019722 GO:GO:0005179
            GO:GO:0007267 GO:GO:0004871 EMBL:AC004238 InterPro:IPR008801
            Pfam:PF05498 HOGENOM:HOG000015121 IPI:IPI00846319
            RefSeq:NP_001078003.1 UniGene:At.72192 EnsemblPlants:AT2G34825.1
            GeneID:5007931 KEGG:ath:AT2G34825 TAIR:At2g34825 eggNOG:NOG257466
            OMA:AMREDEP PhylomeDB:A8MQL7 ProtClustDB:CLSN2699076
            Genevestigator:A8MQL7 Uniprot:A8MQL7
        Length = 72

 Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 24/74 (32%), Positives = 35/74 (47%)

Query:     1 MMMSKRMMVFGVIMVLTASIVMVVKDXXXXXXXXXXXXXXXXNPGCSPVHPELCKMEPGN 60
             M++SK+ ++    +++  SIVM   +                  GC P  P  CKM+P N
Sbjct:     1 MVLSKKTIMQSFALMIILSIVMSTTEAKTIGNPAMREDEPK---GCPPGSPASCKMQPAN 57

Query:    61 PYHRGCENEAQCRG 74
             PY  GCE   +CRG
Sbjct:    58 PYKPGCEASQRCRG 71


>TAIR|locus:4010713671 [details] [associations]
            symbol:AT2G32885 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] GO:GO:0005576
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0019722 GO:GO:0005179
            GO:GO:0004871 EMBL:AC003033 UniGene:At.66361 InterPro:IPR008801
            Pfam:PF05498 HOGENOM:HOG000015121 UniGene:At.69626
            ProtClustDB:CLSN2699076 EMBL:DQ069843 IPI:IPI00846954
            RefSeq:NP_001077998.1 EnsemblPlants:AT2G32885.1 GeneID:5007924
            KEGG:ath:AT2G32885 TAIR:At2g32885 OMA:AMREDLP PhylomeDB:A8MR00
            Genevestigator:A8MR00 Uniprot:A8MR00
        Length = 72

 Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 24/74 (32%), Positives = 34/74 (45%)

Query:     1 MMMSKRMMVFGVIMVLTASIVMVVKDXXXXXXXXXXXXXXXXNPGCSPVHPELCKMEPGN 60
             M +SK+ +V    +++  SIVM   +                  GC+P     CKM+P N
Sbjct:     1 MGISKKTVVQSFALIIIISIVMSTTEANSIGAPAMREDLPK---GCAPGSSAGCKMQPAN 57

Query:    61 PYHRGCENEAQCRG 74
             PY  GCE   +CRG
Sbjct:    58 PYKPGCEASQRCRG 71


>TAIR|locus:2123091 [details] [associations]
            symbol:RALFL28 "ralf-like 28" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007267
            "cell-cell signaling" evidence=ISS] [GO:0048046 "apoplast"
            evidence=ISS] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0048046
            GO:GO:0019722 GO:GO:0005179 GO:GO:0007267 GO:GO:0004871
            EMBL:AL161532 EMBL:AL050399 InterPro:IPR008801 Pfam:PF05498
            EMBL:DQ446819 EMBL:DQ653190 IPI:IPI00526978 PIR:T10571
            RefSeq:NP_192889.1 UniGene:At.65357 EnsemblPlants:AT4G11510.1
            GeneID:826756 KEGG:ath:AT4G11510 TAIR:At4g11510 eggNOG:NOG259726
            OMA:NVAVANE PhylomeDB:Q9LDU1 ProtClustDB:CLSN2685319
            ArrayExpress:Q9LDU1 Genevestigator:Q9LDU1 Uniprot:Q9LDU1
        Length = 85

 Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 17/32 (53%), Positives = 19/32 (59%)

Query:    44 PGCSPVHPELCKMEPGNPYHRGCENEAQCRGP 75
             PGC   H      +P NPYHRGCE   +CRGP
Sbjct:    46 PGCD--HGNCPPDQPANPYHRGCEKSKRCRGP 75


>TAIR|locus:505006196 [details] [associations]
            symbol:RALFL9 "ralf-like 9" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007267
            "cell-cell signaling" evidence=ISS] [GO:0048046 "apoplast"
            evidence=ISS] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0048046
            GO:GO:0019722 GO:GO:0005179 GO:GO:0007267 GO:GO:0004871
            EMBL:AC005850 InterPro:IPR008801 Pfam:PF05498 HOGENOM:HOG000015121
            ProtClustDB:CLSN2688976 EMBL:BT026021 EMBL:AY087014 IPI:IPI00534565
            RefSeq:NP_564779.1 UniGene:At.36415 STRING:Q3ECL0
            EnsemblPlants:AT1G61566.1 GeneID:842452 KEGG:ath:AT1G61566
            TAIR:At1g61566 eggNOG:NOG304966 InParanoid:Q3ECL0 OMA:CKKKEAN
            PhylomeDB:Q3ECL0 Genevestigator:Q3ECL0 Uniprot:Q3ECL0
        Length = 75

 Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 15/29 (51%), Positives = 17/29 (58%)

Query:    46 CSPVHPELCKMEPGNPYHRGCENEAQCRG 74
             C   HP  CK +  NPY RGCE   +CRG
Sbjct:    46 CDKAHPNTCKKKEANPYQRGCEKINRCRG 74


>TAIR|locus:4010713569 [details] [associations]
            symbol:RALFL7 "RALF-like 7" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007267
            "cell-cell signaling" evidence=ISS] [GO:0048046 "apoplast"
            evidence=ISS] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0048046
            GO:GO:0019722 GO:GO:0005179 GO:GO:0007267 GO:GO:0004871
            EMBL:AC079675 InterPro:IPR008801 Pfam:PF05498 HOGENOM:HOG000015121
            ProtClustDB:CLSN2699058 eggNOG:NOG295612 IPI:IPI00846893
            RefSeq:NP_001077746.1 UniGene:At.72217 EnsemblPlants:AT1G60815.1
            GeneID:5007822 KEGG:ath:AT1G60815 TAIR:At1g60815 PhylomeDB:A8MRD4
            Genevestigator:A8MRD4 Uniprot:A8MRD4
        Length = 81

 Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query:    44 PGCSPVHPELCKMEPGNPYHRGCENEAQC 72
             PGC+  +P+ C   P N YHRGCE   +C
Sbjct:    44 PGCTSKNPKECVKVPANTYHRGCEISTRC 72


>TAIR|locus:4010713645 [details] [associations]
            symbol:RALFL15 "RALF-like 15" species:3702
            "Arabidopsis thaliana" [GO:0005576 "extracellular region"
            evidence=ISM] [GO:0004871 "signal transducer activity"
            evidence=TAS] [GO:0007267 "cell-cell signaling" evidence=ISS]
            [GO:0048046 "apoplast" evidence=ISS] EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0048046 GO:GO:0019722 GO:GO:0005179
            GO:GO:0007267 GO:GO:0004871 EMBL:AC007232 InterPro:IPR008801
            Pfam:PF05498 EMBL:EG514705 IPI:IPI00846653 RefSeq:NP_001077939.1
            UniGene:At.22223 STRING:A8MQM7 PaxDb:A8MQM7
            EnsemblPlants:AT2G22055.1 GeneID:5007898 KEGG:ath:AT2G22055
            TAIR:At2g22055 eggNOG:NOG325518 HOGENOM:HOG000015121 OMA:PNTCKKQ
            PhylomeDB:A8MQM7 ProtClustDB:CLSN2688976 Genevestigator:A8MQM7
            Uniprot:A8MQM7
        Length = 79

 Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query:    46 CSPVHPELCKMEPGNPYHRGCENEAQCRGPGGQ 78
             C   HP  CK +  NPY RGC    +CR   G+
Sbjct:    46 CDKAHPNTCKKQVANPYRRGCGTIERCRRDTGR 78


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.439    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       81        65   0.00091  102 3  11 22  0.42    28
                                                     29  0.46    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  472 (50 KB)
  Total size of DFA:  92 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.81u 0.11s 6.92t   Elapsed:  00:00:00
  Total cpu time:  6.81u 0.11s 6.92t   Elapsed:  00:00:00
  Start:  Sat May 11 01:50:22 2013   End:  Sat May 11 01:50:22 2013

Back to top