BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041712
(81 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224127154|ref|XP_002329413.1| predicted protein [Populus trichocarpa]
gi|222870463|gb|EEF07594.1| predicted protein [Populus trichocarpa]
Length = 99
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 3 MSKRMMVFGVIMVL-------TASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCK 55
MSK +MVFG+ +++ A + V + + IGYGAIG GGN C P +P+ C
Sbjct: 1 MSKTLMVFGLAVMVGCACFAEAAGVPTVADNKTPSPVIGYGAIGRGGNHECGPKNPKACN 60
Query: 56 MEPGNPYHRGCENEAQCRGPG 76
P NPY+RGCE E C G
Sbjct: 61 DVPANPYYRGCEKEDHCHNGG 81
>gi|255564952|ref|XP_002523469.1| conserved hypothetical protein [Ricinus communis]
gi|223537297|gb|EEF38928.1| conserved hypothetical protein [Ricinus communis]
Length = 72
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGN 60
M +SK++ VF + M+L S+V+ V A IG GA+ GC P + + CK GN
Sbjct: 1 MAISKKLTVFCLGMLLCMSLVVRVSSSAA---IGNGAMKGDDGSGCGPENRQGCKEGQGN 57
Query: 61 PYHRGCENEAQCRGP 75
PY RGCE CRGP
Sbjct: 58 PYSRGCEKGQDCRGP 72
>gi|297823271|ref|XP_002879518.1| hypothetical protein ARALYDRAFT_902570 [Arabidopsis lyrata subsp.
lyrata]
gi|297325357|gb|EFH55777.1| hypothetical protein ARALYDRAFT_902570 [Arabidopsis lyrata subsp.
lyrata]
Length = 72
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGN 60
M++SK+ ++ +++ SIVM EAK IG A+ GC+P P CKM+P N
Sbjct: 1 MVISKKTIMQSFALIIIISIVM---STTEAKTIGNPAMREDEPKGCAPGSPSGCKMQPAN 57
Query: 61 PYHRGCENEAQCRG 74
PY GCE +CRG
Sbjct: 58 PYKPGCEASQRCRG 71
>gi|145330356|ref|NP_001078003.1| RALF-like 20 protein [Arabidopsis thaliana]
gi|426020484|sp|A8MQL7.1|RLF20_ARATH RecName: Full=Protein RALF-like 20; Flags: Precursor
gi|330253932|gb|AEC09026.1| RALF-like 20 protein [Arabidopsis thaliana]
Length = 72
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGN 60
M++SK+ ++ +++ SIVM EAK IG A+ GC P P CKM+P N
Sbjct: 1 MVLSKKTIMQSFALMIILSIVM---STTEAKTIGNPAMREDEPKGCPPGSPASCKMQPAN 57
Query: 61 PYHRGCENEAQCRG 74
PY GCE +CRG
Sbjct: 58 PYKPGCEASQRCRG 71
>gi|297823077|ref|XP_002879421.1| hypothetical protein ARALYDRAFT_902354 [Arabidopsis lyrata subsp.
lyrata]
gi|297325260|gb|EFH55680.1| hypothetical protein ARALYDRAFT_902354 [Arabidopsis lyrata subsp.
lyrata]
Length = 72
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGN 60
M++SK+ +V + ++ SIVM EAK IG A+ GC P P CKM+P N
Sbjct: 1 MVISKKTIVQSLAFMIIISIVM---STTEAKSIGVPAMREDLPKGCGPGSPPGCKMQPAN 57
Query: 61 PYHRGCENEAQCRG 74
PY GCE +CRG
Sbjct: 58 PYKPGCEASQRCRG 71
>gi|224143419|ref|XP_002324950.1| predicted protein [Populus trichocarpa]
gi|222866384|gb|EEF03515.1| predicted protein [Populus trichocarpa]
Length = 77
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGN-PGCSPVHPELCKMEPG 59
M S ++M G+ M++ + + + ++I YGAI G + P C P HP C P
Sbjct: 1 MSPSNKLMALGLCMLMACT--LFAGNAEATRDINYGAIVKGDHEPFCGPTHP--CVKTPA 56
Query: 60 NPYHRGCENEAQCRGPGGQNNN 81
N YHRGCE +CR GG+N+N
Sbjct: 57 NGYHRGCETINKCR--GGRNDN 76
>gi|297845366|ref|XP_002890564.1| hypothetical protein ARALYDRAFT_472570 [Arabidopsis lyrata subsp.
lyrata]
gi|297336406|gb|EFH66823.1| hypothetical protein ARALYDRAFT_472570 [Arabidopsis lyrata subsp.
lyrata]
Length = 103
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 13 IMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPEL-CK-MEPGNPYHRGCENEA 70
I+VL+ + ++K A+ KEIGY AIG G GCSP +P + C+ +P NPY RGCE
Sbjct: 11 ILVLSCVFMNIMKVEAQ-KEIGYPAIGRDGAHGCSPKYPSVPCRPKQPENPYKRGCEKIT 69
Query: 71 QCRGPG 76
+C+ G
Sbjct: 70 RCKRDG 75
>gi|224105763|ref|XP_002333770.1| predicted protein [Populus trichocarpa]
gi|222838442|gb|EEE76807.1| predicted protein [Populus trichocarpa]
Length = 72
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGN-PGCSPVHPELCKMEPG 59
M S ++M G+ M++ + + + ++I YGAI G + P C P HP C P
Sbjct: 1 MSPSNKLMALGLCMLMACT--LFAGNAEATRDINYGAIVKGDHEPFCGPTHP--CVKTPA 56
Query: 60 NPYHRGCENEAQCRG 74
N YHRGCE +CRG
Sbjct: 57 NGYHRGCETINKCRG 71
>gi|255564954|ref|XP_002523470.1| conserved hypothetical protein [Ricinus communis]
gi|223537298|gb|EEF38929.1| conserved hypothetical protein [Ricinus communis]
Length = 79
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGN 60
M + +++ VF + M+L S++ +D A A +G GA+ +P C P P+ CK N
Sbjct: 2 MAIPEKLTVFCLGMLLCMSLL--ARD-ANATTLGNGAMEGDHDPACGPESPQGCKKGQAN 58
Query: 61 PYHRGCENEAQCRGP 75
Y RGCE +CRGP
Sbjct: 59 KYSRGCEKGEECRGP 73
>gi|145330346|ref|NP_001077998.1| Rapid alkalinization factor (RALF) family protein [Arabidopsis
thaliana]
gi|426020643|sp|A8MR00.1|RLF36_ARATH RecName: Full=Protein RALF-like 36; Flags: Precursor
gi|330253663|gb|AEC08757.1| Rapid alkalinization factor (RALF) family protein [Arabidopsis
thaliana]
Length = 72
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGN 60
M +SK+ +V +++ SIVM EA IG A+ GC+P CKM+P N
Sbjct: 1 MGISKKTVVQSFALIIIISIVM---STTEANSIGAPAMREDLPKGCAPGSSAGCKMQPAN 57
Query: 61 PYHRGCENEAQCRG 74
PY GCE +CRG
Sbjct: 58 PYKPGCEASQRCRG 71
>gi|297826723|ref|XP_002881244.1| hypothetical protein ARALYDRAFT_902345 [Arabidopsis lyrata subsp.
lyrata]
gi|297327083|gb|EFH57503.1| hypothetical protein ARALYDRAFT_902345 [Arabidopsis lyrata subsp.
lyrata]
Length = 88
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 12 VIMVLTASIVMVVKDGA-EAKEIGYGAIGAGGNPGCSPVHPELCKMEPGNPYHRGCENEA 70
V + T I++ + G+ E + +GYGAI G P C +P C +P N YHRGCE
Sbjct: 10 VFLFATMMIILFMFCGSGETRTLGYGAIKRGQVPACGSKNPNSCVKQPVNHYHRGCEKLT 69
Query: 71 QC 72
+C
Sbjct: 70 RC 71
>gi|15233395|ref|NP_192889.1| protein ralf-like 28 [Arabidopsis thaliana]
gi|75173854|sp|Q9LDU1.1|RLF28_ARATH RecName: Full=Protein RALF-like 28; Flags: Precursor
gi|7267851|emb|CAB78194.1| hypothetical protein [Arabidopsis thaliana]
gi|7321048|emb|CAB82156.1| hypothetical protein [Arabidopsis thaliana]
gi|91806658|gb|ABE66056.1| unknown [Arabidopsis thaliana]
gi|332657619|gb|AEE83019.1| protein ralf-like 28 [Arabidopsis thaliana]
Length = 85
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 4 SKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGG-NPGCSPVHPELCKMEPGNPY 62
+KR MV V M + + + A A EIGY +G G PGC H +P NPY
Sbjct: 7 TKRFMV--VAMFIACVFISNNMNVAVANEIGYPGMGRGDRQPGCD--HGNCPPDQPANPY 62
Query: 63 HRGCENEAQCRGP 75
HRGCE +CRGP
Sbjct: 63 HRGCEKSKRCRGP 75
>gi|116831347|gb|ABK28626.1| unknown [Arabidopsis thaliana]
Length = 86
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 4 SKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGG-NPGCSPVHPELCKMEPGNPY 62
+KR MV V M + + + A A EIGY +G G PGC H +P NPY
Sbjct: 7 TKRFMV--VAMFIACVFISNNMNVAVANEIGYPGMGRGDRQPGCD--HGNCPPDQPANPY 62
Query: 63 HRGCENEAQCRGP 75
HRGCE +CRGP
Sbjct: 63 HRGCEKSKRCRGP 75
>gi|145323992|ref|NP_001077585.1| protein RALF-like 2 [Arabidopsis thaliana]
gi|426020568|sp|A8MQ92.1|RLF2_ARATH RecName: Full=Protein RALF-like 2; Flags: Precursor
gi|332192224|gb|AEE30345.1| protein RALF-like 2 [Arabidopsis thaliana]
Length = 97
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 2 MMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGNP 61
M ++ M+V I++L+ + ++K A+ K IGY AIG G GCSP P C +P P
Sbjct: 1 MEARHMLV--TILLLSFVFMNIMKVEAQ-KVIGYPAIGRDGARGCSPKDPS-CPQQPEKP 56
Query: 62 YHRGCENEAQC 72
Y RGCE +C
Sbjct: 57 YKRGCEKITRC 67
>gi|224143413|ref|XP_002324948.1| predicted protein [Populus trichocarpa]
gi|222866382|gb|EEF03513.1| predicted protein [Populus trichocarpa]
Length = 75
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGN-PGCSPVHPELCKMEPG 59
M S ++M G+ M++ ++ + + I YGAI G + P C P HP C P
Sbjct: 1 MSPSNKLMALGLCMLMACTLF--AGNAEATRSINYGAIVKGDHEPFCGPKHP--CVKTPA 56
Query: 60 NPYHRGCENEAQCRG 74
N YHRGCE +C G
Sbjct: 57 NGYHRGCETFYRCHG 71
>gi|145330344|ref|NP_001077997.1| RALF-like 16 protein [Arabidopsis thaliana]
gi|426020406|sp|A8MRM1.1|RLF16_ARATH RecName: Full=Protein RALF-like 16; Flags: Precursor
gi|330253654|gb|AEC08748.1| RALF-like 16 protein [Arabidopsis thaliana]
Length = 95
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 12 VIMVLTASIVMVVKDGA-EAKEIGYGAIGAGGNPGCSPVHPELCKMEPGNPYHRGCENEA 70
V + T +VM + G+ EA+ +GYG+I P C +P C +P N YHRGCE
Sbjct: 10 VFLFATMMLVMFLFCGSGEARTLGYGSIKGDRIPACGYKNPNSCVKQPVNHYHRGCEKIT 69
Query: 71 QC 72
+C
Sbjct: 70 RC 71
>gi|18407238|ref|NP_564779.1| ralf-like 9 protein [Arabidopsis thaliana]
gi|122215346|sp|Q3ECL0.1|RLF9_ARATH RecName: Full=Protein RALF-like 9; Flags: Precursor
gi|109134225|gb|ABG25110.1| At1g61566 [Arabidopsis thaliana]
gi|332195735|gb|AEE33856.1| ralf-like 9 protein [Arabidopsis thaliana]
Length = 75
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNP-GCSPVHPELCKMEPG 59
M MSK + V + + L + + + I Y AI G + C HP CK +
Sbjct: 1 MGMSKSIKVI-LSLALVVFLALAATKVEATRYITYPAIDRGDHAVHCDKAHPNTCKKKEA 59
Query: 60 NPYHRGCENEAQCRG 74
NPY RGCE +CRG
Sbjct: 60 NPYQRGCEKINRCRG 74
>gi|145326074|ref|NP_001077746.1| RALF-like 7 protein [Arabidopsis thaliana]
gi|426020684|sp|A8MRD4.1|RLF7_ARATH RecName: Full=Protein RALF-like 7; Flags: Precursor
gi|332195615|gb|AEE33736.1| RALF-like 7 protein [Arabidopsis thaliana]
Length = 81
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 6 RMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGNPYHRG 65
R+ VF V +++ S+V +G K+I Y + PGC+ +P+ C P N YHRG
Sbjct: 8 RIHVFFVSIMIIISLVSGFGEGI--KQINYKDLIKDTIPGCTSKNPKECVKVPANTYHRG 65
Query: 66 CENEAQC 72
CE +C
Sbjct: 66 CEISTRC 72
>gi|297813623|ref|XP_002874695.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297320532|gb|EFH50954.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 84
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGN-PGCSPVHPELCKMEPG 59
M + K + + + A + + + A A IGY I G + PGC H + +P
Sbjct: 1 MSILKGTKRYIAVAIFIACLFISNMNVAAANVIGYPPIKGGDDQPGCD--HGKCPPKQPA 58
Query: 60 NPYHRGCENEAQCRGPG 76
NPYHRGCE +CRGP
Sbjct: 59 NPYHRGCEKTNRCRGPS 75
>gi|297837297|ref|XP_002886530.1| hypothetical protein ARALYDRAFT_893357 [Arabidopsis lyrata subsp.
lyrata]
gi|297332371|gb|EFH62789.1| hypothetical protein ARALYDRAFT_893357 [Arabidopsis lyrata subsp.
lyrata]
Length = 81
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 1 MMMSKRM-MVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNP-GCSPVHPELCKMEP 58
M MSK + ++ +++V+ + + EAK I Y + G + C +P CK +
Sbjct: 1 MGMSKSVKIILSLVLVV---FLALAATKTEAKVIDYRGLSRGDHSRNCDRANPASCKKQE 57
Query: 59 GNPYHRGCENEAQCRG 74
NPY RGCE CRG
Sbjct: 58 ANPYRRGCETTLHCRG 73
>gi|262093030|gb|ACY25867.1| RALF [Brassica rapa var. parachinensis]
Length = 79
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 28 AEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGNPYHRGCENEAQCRG 74
E++ I Y A+ + C HP CK E NPY RGCE +CRG
Sbjct: 26 TESRYINYHALHGDHSLICDKAHPNTCKKEEANPYTRGCETIDRCRG 72
>gi|297840493|ref|XP_002888128.1| hypothetical protein ARALYDRAFT_893479 [Arabidopsis lyrata subsp.
lyrata]
gi|297333969|gb|EFH64387.1| hypothetical protein ARALYDRAFT_893479 [Arabidopsis lyrata subsp.
lyrata]
Length = 80
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 3 MSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGNPY 62
MS + F IM++ + + + G +K I YG + P C +P+ C P NPY
Sbjct: 6 MSLTSLFFVSIMIILS---LFSRFGEGSKYINYGDMRKDIIPACGSKNPKECVKVPANPY 62
Query: 63 HRGCENEAQCR 73
HRGCE C
Sbjct: 63 HRGCEISTHCH 73
>gi|145558682|gb|ABP73254.1| MF14 [Brassica rapa]
Length = 79
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 28 AEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGNPYHRGCENEAQCRG 74
E++ I Y A+ + C HP CK E NPY RGCE +CRG
Sbjct: 26 TESRYINYHALHGDHSLICDKAHPNTCKKEEANPYTRGCETIDRCRG 72
>gi|224143415|ref|XP_002324949.1| predicted protein [Populus trichocarpa]
gi|222866383|gb|EEF03514.1| predicted protein [Populus trichocarpa]
Length = 75
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGN-PGCSPVHPELCKMEPG 59
M S ++M G+ M++ ++ + + I YGAI G + P C P HP C P
Sbjct: 1 MSPSNKLMALGLCMLMACTLF--AGNAEATRSINYGAIVKGDHEPFCGPKHP--CVKTPA 56
Query: 60 NPYHRGCENEAQCRG 74
N Y RGCE +C G
Sbjct: 57 NRYSRGCETFYRCHG 71
>gi|21592626|gb|AAM64575.1| unknown [Arabidopsis thaliana]
Length = 75
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNP-GCSPVHPELCKMEPG 59
M MSK + V + + L + + + I Y AI G + C HP CK +
Sbjct: 1 MGMSKSIKVI-LSLALVVFLALAGTKVEATRYITYPAIDRGDHAVHCDKAHPNTCKKKQA 59
Query: 60 NPYHRGCENEAQCRG 74
NPY RGCE +CRG
Sbjct: 60 NPYQRGCEKINRCRG 74
>gi|255575968|ref|XP_002528880.1| conserved hypothetical protein [Ricinus communis]
gi|223531679|gb|EEF33504.1| conserved hypothetical protein [Ricinus communis]
Length = 86
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 3 MSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGNPY 62
+SK++ VFG++ T + ++ A + IG GA+ P C+P++ C + N Y
Sbjct: 5 ISKKLRVFGLV---TLVFIFLLAGEANSARIGNGALEGDVKP-CTPMNHAACGQQQANQY 60
Query: 63 HRGCENEAQCRG 74
RGCE CR
Sbjct: 61 QRGCEKGKDCRS 72
>gi|297837563|ref|XP_002886663.1| hypothetical protein ARALYDRAFT_893590 [Arabidopsis lyrata subsp.
lyrata]
gi|297332504|gb|EFH62922.1| hypothetical protein ARALYDRAFT_893590 [Arabidopsis lyrata subsp.
lyrata]
Length = 89
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 12 VIMVLTASIVMVVKDGA-EAKEIGYGAI-GAGGNPGCSPVHPELCKMEPGNPYHRGCENE 69
V + T I++ + G+ EA+ +GYG++ G P C +P C +P N YHRGCE
Sbjct: 10 VFLFATMMIILFMFCGSGEARTLGYGSVLGKDKIPACGYKNPNSCVKQPVNHYHRGCEKL 69
Query: 70 AQC 72
+C
Sbjct: 70 NRC 72
>gi|297813625|ref|XP_002874696.1| hypothetical protein ARALYDRAFT_489977 [Arabidopsis lyrata subsp.
lyrata]
gi|297320533|gb|EFH50955.1| hypothetical protein ARALYDRAFT_489977 [Arabidopsis lyrata subsp.
lyrata]
Length = 55
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 30 AKEIGYGAIGAGG-NPGCSPVHPELCKMEPGNPYHRGCENEAQCRGP 75
AK+IGY IG G PGC H +P NPYHRGCE +CRGP
Sbjct: 1 AKDIGYPGIGRGDRQPGCD--HGNCPPDQPANPYHRGCEIAKRCRGP 45
>gi|297837299|ref|XP_002886531.1| hypothetical protein ARALYDRAFT_893358 [Arabidopsis lyrata subsp.
lyrata]
gi|297332372|gb|EFH62790.1| hypothetical protein ARALYDRAFT_893358 [Arabidopsis lyrata subsp.
lyrata]
Length = 80
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPG-CSPVHPELCKMEPG 59
M MSK + V + ++ + +K A + I Y +I G + C HP CK +
Sbjct: 1 MGMSKSIKVILSLALVVFLALASIKVEA-TRYITYPSINHGDHATHCDKAHPNTCKKKEA 59
Query: 60 NPYHRGCENEAQCRG 74
NPY RGCE +CRG
Sbjct: 60 NPYKRGCEILERCRG 74
>gi|66734261|gb|AAY53537.1| rapid alkalinization factor 1 [Brassica oleracea var. botrytis]
Length = 79
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 28 AEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGNPYHRGCENEAQCRG 74
E++ I Y A+ + C +P CK E NPY RGCE +CRG
Sbjct: 26 TESRYINYHALHGDHSLICDKANPSTCKKEEANPYTRGCEIIDRCRG 72
>gi|145323994|ref|NP_001077586.1| protein RALF-like 3 [Arabidopsis thaliana]
gi|426020652|sp|A7REE5.1|RLF3_ARATH RecName: Full=Protein RALF-like 3; Flags: Precursor
gi|113204488|gb|ABI34037.1| unknown [Arabidopsis thaliana]
gi|332192225|gb|AEE30346.1| protein RALF-like 3 [Arabidopsis thaliana]
Length = 90
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 14/78 (17%)
Query: 10 FGVIMVLTASIVMVVKDGAEAKEIGYGAIGAG---GNP----------GCSPVHPELC-K 55
F ++ VL + + + + + KEIGY G NP GC P +P+ C
Sbjct: 10 FILVAVLVSFVFLSIMNAEARKEIGYPKQRFGEDRTNPYEEITPPLIGGCDPKNPQTCLP 69
Query: 56 MEPGNPYHRGCENEAQCR 73
+P NPY RGC +C+
Sbjct: 70 KQPANPYRRGCLKITRCQ 87
>gi|116830041|gb|ABK27978.1| unknown [Arabidopsis thaliana]
Length = 91
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 14/78 (17%)
Query: 10 FGVIMVLTASIVMVVKDGAEAKEIGYGAIGAG---GNP----------GCSPVHPELC-K 55
F ++ VL + + + + + KEIGY G NP GC P +P+ C
Sbjct: 10 FILVAVLVSFVFLSIMNAEARKEIGYPKQRFGEDRTNPYEEITPPLIGGCDPKNPQTCLP 69
Query: 56 MEPGNPYHRGCENEAQCR 73
+P NPY RGC +C+
Sbjct: 70 KQPANPYRRGCLKITRCQ 87
>gi|297837303|ref|XP_002886533.1| hypothetical protein ARALYDRAFT_893360 [Arabidopsis lyrata subsp.
lyrata]
gi|297332374|gb|EFH62792.1| hypothetical protein ARALYDRAFT_893360 [Arabidopsis lyrata subsp.
lyrata]
Length = 79
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGN-PGCSPVHPELCKMEPG 59
M MSK + V + + L + + + I Y +I G + P C HP C +
Sbjct: 1 MGMSKSIKVI-LSLALVVFLALATTKVEATRYISYPSINTGDHAPHCDKAHPHTCWKKEA 59
Query: 60 NPYHRGC 66
NPY RGC
Sbjct: 60 NPYRRGC 66
>gi|145558684|gb|ABP73255.1| MF14 [Brassica rapa var. purpuraria]
Length = 73
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Query: 8 MVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGNPYHRGCE 67
+ F V + A+ + A+ I Y A+ C ++P+ CK + + Y +GCE
Sbjct: 13 LAFVVFLAFAATKIEA------ARTIDYAALDKDHALACDKLNPKTCKKQEMSHYSKGCE 66
Query: 68 NEAQCR 73
CR
Sbjct: 67 QSEHCR 72
>gi|18407236|ref|NP_564778.1| ralf-like 8 protein [Arabidopsis thaliana]
gi|122178105|sp|Q1ECR9.1|RLF8_ARATH RecName: Full=Protein RALF-like 8; Flags: Precursor
gi|105829561|gb|ABF74697.1| At1g61563 [Arabidopsis thaliana]
gi|332195734|gb|AEE33855.1| ralf-like 8 protein [Arabidopsis thaliana]
Length = 82
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNP-GCSPVHPELCKMEPG 59
M MSK + V + ++ + K A + I Y AI G + C HP CK +
Sbjct: 1 MGMSKSIKVILSLALVVFLALAGTKVEASVRYITYPAIDRGDHAVHCDKAHPNTCKKKQA 60
Query: 60 NPYHRGC 66
NPY RGC
Sbjct: 61 NPYRRGC 67
>gi|255583831|ref|XP_002532667.1| conserved hypothetical protein [Ricinus communis]
gi|223527600|gb|EEF29714.1| conserved hypothetical protein [Ricinus communis]
Length = 80
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 33 IGYGAIGAGGNPGCSPVHPELCKMEPGNPYHRGCENEAQCRGP 75
I GA+G P CS V+ + C+ + N + RGC+ +CRG
Sbjct: 5 ISNGALGKNKMPVCSIVNQKHCRKQQANDWQRGCQKGHKCRGD 47
>gi|297831936|ref|XP_002883850.1| hypothetical protein ARALYDRAFT_899687 [Arabidopsis lyrata subsp.
lyrata]
gi|297329690|gb|EFH60109.1| hypothetical protein ARALYDRAFT_899687 [Arabidopsis lyrata subsp.
lyrata]
Length = 91
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Query: 2 MMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELC--KMEPG 59
M+ + + F I++L + + A+ K I Y GN GC P P K P
Sbjct: 1 MIKTKEVTFVTILILLCVFICCI--DAQKKYIHYPIRRDLGN-GCDPRFPTAACYKRIPA 57
Query: 60 NPYHRGCENEAQCR 73
NPY RGC +CR
Sbjct: 58 NPYTRGCSIANRCR 71
>gi|21592764|gb|AAM64713.1| unknown [Arabidopsis thaliana]
Length = 82
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 12 VIMVLTASIVMVV---KDGAEAKEIGYGAIGAGGNP-GCSPVHPELCKMEPGNPYHRGC 66
VI+ L + + + K A + I Y AI G + C HP CK + NPY RGC
Sbjct: 9 VILSLALVVFLALAGTKVEASVRYITYPAIDRGDHAVHCDKAHPNTCKKKQANPYRRGC 67
>gi|145329579|ref|NP_001077939.1| protein RALF-like 15 [Arabidopsis thaliana]
gi|426020397|sp|A8MQM7.1|RLF15_ARATH RecName: Full=Protein RALF-like 15; Flags: Precursor
gi|330252163|gb|AEC07257.1| protein RALF-like 15 [Arabidopsis thaliana]
Length = 79
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 30 AKEIGYGAIGAGGNP-GCSPVHPELCKMEPGNPYHRGCENEAQCRGPGGQ 78
+ I Y + G + C HP CK + NPY RGC +CR G+
Sbjct: 29 TRYISYRGMNHGDHAIHCDKAHPNTCKKQVANPYRRGCGTIERCRRDTGR 78
>gi|255575954|ref|XP_002528873.1| conserved hypothetical protein [Ricinus communis]
gi|223531672|gb|EEF33497.1| conserved hypothetical protein [Ricinus communis]
Length = 84
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 16 LTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGNPYHRGCENEAQCRG 74
+ SI ++VK+ A I G + CSP +P C+ + N Y RGCE +CR
Sbjct: 1 MLISISLLVKE-ANGSGIVNGVMHHNHITECSPRNPGNCRKQQANEYQRGCEKAEKCRS 58
>gi|317411426|gb|ADV19016.1| rapid alkalinization factor [Brassica rapa subsp. pekinensis]
Length = 79
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 29 EAKEIGYGAIGAGGNP-GCSPVHPELCKMEPGNPYHRGCENEAQCR 73
EA+ I Y + +G + C + C + N Y RGCE+ +CR
Sbjct: 27 EARYINYRDLRSGDHSLACDTANSSTCTKQEVNRYQRGCESADRCR 72
>gi|224093894|ref|XP_002334814.1| predicted protein [Populus trichocarpa]
gi|222875096|gb|EEF12227.1| predicted protein [Populus trichocarpa]
Length = 71
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGN 60
M MSK +M FGV+M+ + V KE Y I G P C P C + P
Sbjct: 1 MSMSKGLMAFGVLMLFMTTFVAGDVANTITKEPKY--ISYEGLPRCDPEKNPHC-LHPVA 57
Query: 61 PYHRGCENEAQCR 73
P RGC+ E +CR
Sbjct: 58 P-GRGCKAENRCR 69
>gi|297795669|ref|XP_002865719.1| hypothetical protein ARALYDRAFT_494981 [Arabidopsis lyrata subsp.
lyrata]
gi|297311554|gb|EFH41978.1| hypothetical protein ARALYDRAFT_494981 [Arabidopsis lyrata subsp.
lyrata]
Length = 70
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNP-GCSPVHPELCKMEPG 59
M MSK + V + ++ + K A + I Y I G + C HP CK +
Sbjct: 1 MGMSKSIKVILSLALVLFLALATTKVEA-TRYISYRGINHGDHAIHCDKAHPNTCKKQEA 59
Query: 60 NPYHRGC 66
NPY RGC
Sbjct: 60 NPYRRGC 66
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,463,571,874
Number of Sequences: 23463169
Number of extensions: 57199910
Number of successful extensions: 120213
Number of sequences better than 100.0: 62
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 120177
Number of HSP's gapped (non-prelim): 63
length of query: 81
length of database: 8,064,228,071
effective HSP length: 52
effective length of query: 29
effective length of database: 6,844,143,283
effective search space: 198480155207
effective search space used: 198480155207
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)