BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041712
(81 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A8MQL7|RLF20_ARATH Protein RALF-like 20 OS=Arabidopsis thaliana GN=RALFL20 PE=3 SV=1
Length = 72
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGN 60
M++SK+ ++ +++ SIVM EAK IG A+ GC P P CKM+P N
Sbjct: 1 MVLSKKTIMQSFALMIILSIVM---STTEAKTIGNPAMREDEPKGCPPGSPASCKMQPAN 57
Query: 61 PYHRGCENEAQCRG 74
PY GCE +CRG
Sbjct: 58 PYKPGCEASQRCRG 71
>sp|A8MR00|RLF36_ARATH Protein RALF-like 36 OS=Arabidopsis thaliana GN=At2g32885 PE=3
SV=1
Length = 72
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGN 60
M +SK+ +V +++ SIVM EA IG A+ GC+P CKM+P N
Sbjct: 1 MGISKKTVVQSFALIIIISIVM---STTEANSIGAPAMREDLPKGCAPGSSAGCKMQPAN 57
Query: 61 PYHRGCENEAQCRG 74
PY GCE +CRG
Sbjct: 58 PYKPGCEASQRCRG 71
>sp|Q9LDU1|RLF28_ARATH Protein RALF-like 28 OS=Arabidopsis thaliana GN=RALFL28 PE=2 SV=1
Length = 85
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 4 SKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGG-NPGCSPVHPELCKMEPGNPY 62
+KR MV V M + + + A A EIGY +G G PGC H +P NPY
Sbjct: 7 TKRFMV--VAMFIACVFISNNMNVAVANEIGYPGMGRGDRQPGCD--HGNCPPDQPANPY 62
Query: 63 HRGCENEAQCRGP 75
HRGCE +CRGP
Sbjct: 63 HRGCEKSKRCRGP 75
>sp|A8MQ92|RLF2_ARATH Protein RALF-like 2 OS=Arabidopsis thaliana GN=RALFL2 PE=3 SV=1
Length = 97
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 2 MMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGNP 61
M ++ M+V I++L+ + ++K A+ K IGY AIG G GCSP P C +P P
Sbjct: 1 MEARHMLV--TILLLSFVFMNIMKVEAQ-KVIGYPAIGRDGARGCSPKDPS-CPQQPEKP 56
Query: 62 YHRGCENEAQC 72
Y RGCE +C
Sbjct: 57 YKRGCEKITRC 67
>sp|A8MRM1|RLF16_ARATH Protein RALF-like 16 OS=Arabidopsis thaliana GN=RALFL16 PE=3 SV=1
Length = 95
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 12 VIMVLTASIVMVVKDGA-EAKEIGYGAIGAGGNPGCSPVHPELCKMEPGNPYHRGCENEA 70
V + T +VM + G+ EA+ +GYG+I P C +P C +P N YHRGCE
Sbjct: 10 VFLFATMMLVMFLFCGSGEARTLGYGSIKGDRIPACGYKNPNSCVKQPVNHYHRGCEKIT 69
Query: 71 QC 72
+C
Sbjct: 70 RC 71
>sp|Q3ECL0|RLF9_ARATH Protein RALF-like 9 OS=Arabidopsis thaliana GN=RALFL9 PE=3 SV=1
Length = 75
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNP-GCSPVHPELCKMEPG 59
M MSK + V + + L + + + I Y AI G + C HP CK +
Sbjct: 1 MGMSKSIKVI-LSLALVVFLALAATKVEATRYITYPAIDRGDHAVHCDKAHPNTCKKKEA 59
Query: 60 NPYHRGCENEAQCRG 74
NPY RGCE +CRG
Sbjct: 60 NPYQRGCEKINRCRG 74
>sp|A8MRD4|RLF7_ARATH Protein RALF-like 7 OS=Arabidopsis thaliana GN=RALFL7 PE=3 SV=1
Length = 81
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 6 RMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGNPYHRG 65
R+ VF V +++ S+V +G K+I Y + PGC+ +P+ C P N YHRG
Sbjct: 8 RIHVFFVSIMIIISLVSGFGEGI--KQINYKDLIKDTIPGCTSKNPKECVKVPANTYHRG 65
Query: 66 CENEAQC 72
CE +C
Sbjct: 66 CEISTRC 72
>sp|A7REE5|RLF3_ARATH Protein RALF-like 3 OS=Arabidopsis thaliana GN=RALFL3 PE=3 SV=1
Length = 90
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 14/78 (17%)
Query: 10 FGVIMVLTASIVMVVKDGAEAKEIGYGAIGAG---GNP----------GCSPVHPELC-K 55
F ++ VL + + + + + KEIGY G NP GC P +P+ C
Sbjct: 10 FILVAVLVSFVFLSIMNAEARKEIGYPKQRFGEDRTNPYEEITPPLIGGCDPKNPQTCLP 69
Query: 56 MEPGNPYHRGCENEAQCR 73
+P NPY RGC +C+
Sbjct: 70 KQPANPYRRGCLKITRCQ 87
>sp|Q1ECR9|RLF8_ARATH Protein RALF-like 8 OS=Arabidopsis thaliana GN=RALFL8 PE=2 SV=1
Length = 82
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNP-GCSPVHPELCKMEPG 59
M MSK + V + ++ + K A + I Y AI G + C HP CK +
Sbjct: 1 MGMSKSIKVILSLALVVFLALAGTKVEASVRYITYPAIDRGDHAVHCDKAHPNTCKKKQA 60
Query: 60 NPYHRGC 66
NPY RGC
Sbjct: 61 NPYRRGC 67
>sp|A8MQM7|RLF15_ARATH Protein RALF-like 15 OS=Arabidopsis thaliana GN=RALFL15 PE=3 SV=1
Length = 79
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 30 AKEIGYGAIGAGGNP-GCSPVHPELCKMEPGNPYHRGCENEAQCRGPGGQ 78
+ I Y + G + C HP CK + NPY RGC +CR G+
Sbjct: 29 TRYISYRGMNHGDHAIHCDKAHPNTCKKQVANPYRRGCGTIERCRRDTGR 78
>sp|A8MQM2|RLF6_ARATH Protein RALF-like 6 OS=Arabidopsis thaliana GN=RALFL6 PE=3 SV=1
Length = 81
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 6 RMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELCKMEPGNPYHRG 65
R+ V+++L+ + G I Y + PGCS +P+ C P Y+RG
Sbjct: 10 RIFFVSVMIILS----LFSGFGEGQTYINYNGMKGDIIPGCSSKNPKECVKIPAYSYNRG 65
Query: 66 CENEAQCR 73
CE +C+
Sbjct: 66 CEISTRCQ 73
>sp|A8MQI8|RLF5_ARATH Protein RALF-like 5 OS=Arabidopsis thaliana GN=RALFL5 PE=2 SV=1
Length = 89
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 2 MMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHP--ELCKMEPG 59
M+ ++ +F ++V V V + +AK Y C+P P + K P
Sbjct: 1 MLKAQVFMFVTVLVF----VCVFINSNDAKR--YIEYPPWQKHPCNPRFPTPDCYKRTPA 54
Query: 60 NPYHRGCENEAQCRGPGG 77
NPY RGC ++CR G
Sbjct: 55 NPYRRGCTCISRCRRDCG 72
>sp|A8MQP2|RLF29_ARATH Protein RALF-like 29 OS=Arabidopsis thaliana GN=RALFL29 PE=3 SV=1
Length = 90
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 7/82 (8%)
Query: 1 MMMSKRMMVFGVIMVLTASIVMVVKDGAEAKEIGYGAIGAGGNPGCSPVHPELC--KMEP 58
M+ +K + +++VL I + AK I GC P P K P
Sbjct: 1 MIKTKEVTFVTILIVLCVFISTI-----HAKRYIEYPIRLDLGKGCDPRFPTAACYKRTP 55
Query: 59 GNPYHRGCENEAQCRGPGGQNN 80
NPY R C +CR
Sbjct: 56 ANPYRRPCTTANRCRRSTSSTR 77
>sp|P28329|CLAT_HUMAN Choline O-acetyltransferase OS=Homo sapiens GN=CHAT PE=1 SV=4
Length = 748
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 39 GAGGNPGCSPVHPELCKMEPGNPYHRGCENEAQC 72
G GNPGCSP HP P P H C
Sbjct: 50 GPAGNPGCSP-HPRAATRPPPLPAHTPAHTPEWC 82
>sp|Q9MA62|RLF22_ARATH Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1
Length = 119
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 28 AEAKEIGYGAIGAGGNPGCSPVHPELCKMEPG---NPYHRGCENEAQCR 73
A+ K I YGA+ P CS + G NPY RGC +CR
Sbjct: 71 AQKKYISYGAMRRNSVP-CSRRGASYYNCQRGAQANPYSRGCSTITRCR 118
>sp|Q945T0|RALF_TOBAC Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1
Length = 115
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 28 AEAKEIGYGAIGAGGNPGCSPVHPELCKMEPG---NPYHRGCENEAQCR 73
A K I YGA+ P CS +PG NPY RGC +CR
Sbjct: 67 ATKKYISYGALQKNSVP-CSRRGASYYNCKPGAQANPYSRGCSAITRCR 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,097,212
Number of Sequences: 539616
Number of extensions: 1374460
Number of successful extensions: 3138
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3116
Number of HSP's gapped (non-prelim): 31
length of query: 81
length of database: 191,569,459
effective HSP length: 52
effective length of query: 29
effective length of database: 163,509,427
effective search space: 4741773383
effective search space used: 4741773383
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)