Query 041715
Match_columns 150
No_of_seqs 121 out of 334
Neff 5.9
Searched_HMMs 46136
Date Fri Mar 29 09:55:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041715.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041715hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd08760 Cyt_b561_FRRS1_like Eu 99.8 4.6E-20 1E-24 144.8 6.3 112 2-113 79-191 (191)
2 KOG4293 Predicted membrane pro 99.8 1.3E-20 2.8E-25 163.9 -0.6 131 1-132 257-388 (403)
3 smart00665 B561 Cytochrome b-5 99.5 2.5E-15 5.4E-20 111.4 2.3 82 2-83 44-129 (129)
4 PF03188 Cytochrom_B561: Eukar 99.3 1.6E-12 3.5E-17 96.3 2.8 83 2-84 45-131 (137)
5 cd08554 Cyt_b561 Eukaryotic cy 99.2 7.1E-12 1.5E-16 92.8 2.8 82 2-83 46-131 (131)
6 cd08761 Cyt_b561_CYB561D2_like 99.0 1.5E-10 3.3E-15 90.5 2.7 84 2-85 68-157 (183)
7 cd08766 Cyt_b561_ACYB-1_like P 98.4 2.3E-07 5.1E-12 71.0 2.5 83 2-84 51-137 (144)
8 cd08764 Cyt_b561_CG1275_like N 98.2 1.8E-06 3.9E-11 70.1 4.6 84 2-85 68-157 (214)
9 cd08763 Cyt_b561_CYB561 Verteb 98.1 1.7E-06 3.8E-11 66.1 2.7 83 2-84 51-137 (143)
10 PLN02680 carbon-monoxide oxyge 98.0 3.2E-06 7E-11 69.4 3.0 83 2-84 90-176 (232)
11 cd08765 Cyt_b561_CYBRD1 Verteb 98.0 3.6E-06 7.9E-11 65.1 2.5 83 2-84 58-144 (153)
12 PLN02351 cytochromes b561 fami 98.0 1.5E-05 3.3E-10 65.8 6.1 84 2-85 94-180 (242)
13 cd08762 Cyt_b561_CYBASC3 Verte 97.8 1.2E-05 2.6E-10 63.7 3.0 83 2-84 81-167 (179)
14 PLN02810 carbon-monoxide oxyge 97.4 0.0001 2.2E-09 60.5 3.0 84 2-85 90-177 (231)
15 KOG1619 Cytochrome b [Energy p 96.6 0.0031 6.7E-08 52.2 4.3 85 2-86 99-187 (245)
16 PF10348 DUF2427: Domain of un 96.5 0.0017 3.8E-08 47.1 2.1 47 2-48 54-101 (105)
17 smart00665 B561 Cytochrome b-5 90.0 1.7 3.7E-05 31.7 6.8 30 57-86 30-59 (129)
18 cd08554 Cyt_b561 Eukaryotic cy 87.9 3.6 7.7E-05 30.0 7.3 58 26-86 3-61 (131)
19 PRK09546 zntB zinc transporter 87.1 1.7 3.6E-05 36.7 5.7 43 69-111 272-314 (324)
20 TIGR00383 corA magnesium Mg(2+ 86.0 2 4.4E-05 35.7 5.7 42 69-110 266-307 (318)
21 COG5658 Predicted integral mem 85.8 1.7 3.7E-05 35.3 4.9 67 55-122 40-106 (204)
22 PF13301 DUF4079: Protein of u 85.7 1.2 2.6E-05 35.1 3.9 64 26-94 81-147 (175)
23 PF10951 DUF2776: Protein of u 84.1 1.5 3.3E-05 37.7 4.0 114 4-118 163-282 (347)
24 PF13301 DUF4079: Protein of u 82.7 3.5 7.6E-05 32.5 5.4 60 23-86 112-172 (175)
25 COG0598 CorA Mg2+ and Co2+ tra 81.3 3.3 7.1E-05 35.0 5.1 46 66-111 267-312 (322)
26 PF03188 Cytochrom_B561: Eukar 81.2 9 0.00019 27.8 6.8 29 58-86 66-94 (137)
27 cd08766 Cyt_b561_ACYB-1_like P 80.7 13 0.00027 28.4 7.7 59 23-84 6-64 (144)
28 PF00033 Cytochrom_B_N: Cytoch 80.5 1.8 4E-05 32.4 3.0 61 25-85 47-127 (188)
29 PF11044 TMEMspv1-c74-12: Plec 79.9 3.3 7.1E-05 26.0 3.4 31 92-122 3-34 (49)
30 PF10067 DUF2306: Predicted me 78.9 6.6 0.00014 27.9 5.3 28 60-87 5-32 (103)
31 PLN02680 carbon-monoxide oxyge 78.8 12 0.00026 31.0 7.4 58 24-84 46-103 (232)
32 cd08760 Cyt_b561_FRRS1_like Eu 78.7 19 0.00042 27.8 8.4 59 25-86 69-127 (191)
33 cd08764 Cyt_b561_CG1275_like N 76.8 16 0.00035 29.7 7.6 58 24-84 23-81 (214)
34 cd08761 Cyt_b561_CYB561D2_like 76.3 24 0.00053 27.2 8.3 58 25-84 21-81 (183)
35 cd08762 Cyt_b561_CYBASC3 Verte 74.8 19 0.00042 28.6 7.4 62 24-86 34-96 (179)
36 cd08765 Cyt_b561_CYBRD1 Verteb 74.4 24 0.00053 27.2 7.7 60 24-84 11-71 (153)
37 PF15330 SIT: SHP2-interacting 71.5 7.5 0.00016 28.3 4.0 32 95-126 1-32 (107)
38 cd08763 Cyt_b561_CYB561 Verteb 70.8 35 0.00075 26.0 7.7 59 24-84 6-64 (143)
39 PF13172 PepSY_TM_1: PepSY-ass 70.5 1.8 3.9E-05 24.9 0.5 30 57-86 2-31 (34)
40 PF01544 CorA: CorA-like Mg2+ 70.2 6.2 0.00014 31.6 3.7 35 66-100 239-273 (292)
41 PF13630 SdpI: SdpI/YhfL prote 70.0 2 4.3E-05 28.2 0.7 32 55-86 18-49 (76)
42 PRK11085 magnesium/nickel/coba 69.0 10 0.00023 32.4 5.0 43 68-110 263-305 (316)
43 COG1294 AppB Cytochrome bd-typ 67.5 24 0.00052 30.8 7.0 84 36-119 96-189 (346)
44 PF13703 PepSY_TM_2: PepSY-ass 62.4 5.4 0.00012 27.4 1.7 31 54-85 55-85 (88)
45 PF08507 COPI_assoc: COPI asso 61.4 20 0.00044 26.5 4.8 53 56-115 57-109 (136)
46 PF06697 DUF1191: Protein of u 57.4 9.9 0.00021 32.3 2.7 42 92-133 212-253 (278)
47 PF13706 PepSY_TM_3: PepSY-ass 56.4 5.8 0.00013 23.3 0.9 27 57-83 1-27 (37)
48 COG2717 Predicted membrane pro 54.6 16 0.00035 29.7 3.5 40 58-102 144-183 (209)
49 PF01794 Ferric_reduct: Ferric 52.0 12 0.00027 26.0 2.1 21 60-80 33-53 (125)
50 KOG1619 Cytochrome b [Energy p 51.8 34 0.00074 28.6 5.0 58 25-84 89-146 (245)
51 PF02322 Cyto_ox_2: Cytochrome 51.2 50 0.0011 28.2 6.1 47 40-86 93-143 (328)
52 PF15048 OSTbeta: Organic solu 49.5 24 0.00052 26.6 3.4 23 88-111 31-53 (125)
53 PF06609 TRI12: Fungal trichot 48.9 73 0.0016 29.8 7.2 50 64-113 239-292 (599)
54 PF14358 DUF4405: Domain of un 45.4 34 0.00074 21.9 3.3 26 54-79 35-60 (64)
55 PF11862 DUF3382: Domain of un 45.4 58 0.0013 23.0 4.8 72 5-76 16-99 (101)
56 KOG1608 Protein transporter of 45.3 1.2E+02 0.0027 26.4 7.4 58 29-86 216-279 (374)
57 PF14007 YtpI: YtpI-like prote 45.0 38 0.00082 24.0 3.7 47 27-86 35-81 (89)
58 PF10348 DUF2427: Domain of un 44.8 48 0.001 23.8 4.3 24 27-52 20-43 (105)
59 COG4736 CcoQ Cbb3-type cytochr 43.6 29 0.00062 22.9 2.7 27 28-54 10-36 (60)
60 PF15099 PIRT: Phosphoinositid 42.2 40 0.00087 25.5 3.6 29 57-85 43-73 (129)
61 PHA00726 hypothetical protein 41.5 32 0.0007 24.3 2.8 37 44-82 22-58 (89)
62 PLN02351 cytochromes b561 fami 40.3 85 0.0018 26.2 5.6 53 25-81 51-104 (242)
63 PLN02810 carbon-monoxide oxyge 39.6 1.9E+02 0.0042 23.9 7.5 59 24-85 46-104 (231)
64 COG3038 CybB Cytochrome B561 [ 39.6 27 0.00059 27.7 2.5 46 6-51 23-73 (181)
65 PF03929 PepSY_TM: PepSY-assoc 37.2 25 0.00054 19.4 1.4 23 61-83 2-24 (27)
66 COG3125 CyoD Heme/copper-type 34.3 52 0.0011 24.3 3.1 10 35-44 52-61 (111)
67 PF10856 DUF2678: Protein of u 33.9 1.5E+02 0.0033 22.1 5.5 54 26-85 29-82 (118)
68 PF04478 Mid2: Mid2 like cell 33.5 6.4 0.00014 30.7 -1.9 38 95-132 50-87 (154)
69 PF03729 DUF308: Short repeat 31.5 40 0.00086 21.1 1.9 19 29-47 26-44 (72)
70 PF06011 TRP: Transient recept 31.4 2.2E+02 0.0047 25.0 7.1 34 45-86 341-374 (438)
71 PF13789 DUF4181: Domain of un 30.9 1.1E+02 0.0024 21.8 4.4 29 58-86 25-53 (110)
72 PRK15028 cytochrome bd-II oxid 30.4 1.5E+02 0.0032 26.2 5.8 47 40-86 98-148 (378)
73 PRK11513 cytochrome b561; Prov 29.8 60 0.0013 25.1 3.0 23 26-48 43-65 (176)
74 COG4244 Predicted membrane pro 29.8 1.1E+02 0.0024 24.0 4.4 58 26-89 21-78 (160)
75 PRK15003 cytochrome d ubiquino 29.6 1.9E+02 0.0042 25.5 6.4 46 40-85 98-147 (379)
76 PF07331 TctB: Tripartite tric 28.6 2.2E+02 0.0048 20.3 6.2 22 29-50 39-60 (141)
77 TIGR01620 hyp_HI0043 conserved 28.3 39 0.00085 28.8 1.8 50 93-142 46-98 (289)
78 PRK10209 acid-resistance membr 28.0 1.3E+02 0.0029 23.4 4.8 77 27-116 49-126 (190)
79 PF02628 COX15-CtaA: Cytochrom 27.9 78 0.0017 26.2 3.6 53 26-86 69-121 (302)
80 PF01292 Ni_hydr_CYTB: Prokary 27.6 1.2E+02 0.0025 22.5 4.2 22 25-46 43-64 (182)
81 PF05545 FixQ: Cbb3-type cytoc 27.1 1.2E+02 0.0026 18.4 3.5 12 99-110 13-24 (49)
82 PF12811 BaxI_1: Bax inhibitor 27.0 1.2E+02 0.0026 25.6 4.6 55 66-120 213-271 (274)
83 KOG4112 Signal peptidase subun 26.3 61 0.0013 23.4 2.3 71 65-141 26-97 (101)
84 PRK05415 hypothetical protein; 26.2 1.2E+02 0.0025 26.6 4.4 59 65-124 68-130 (341)
85 PF02439 Adeno_E3_CR2: Adenovi 25.8 1.3E+02 0.0028 18.1 3.2 10 115-124 24-33 (38)
86 PF09656 PGPGW: Putative trans 25.3 1.9E+02 0.0041 18.5 4.3 22 72-93 5-26 (53)
87 TIGR00910 2A0307_GadC glutamat 25.0 5E+02 0.011 23.2 9.5 17 67-83 408-424 (507)
88 PRK14759 potassium-transportin 24.6 1.3E+02 0.0027 17.1 2.9 23 30-52 6-28 (29)
89 TIGR02115 potass_kdpF K+-trans 23.5 98 0.0021 17.1 2.3 22 31-52 2-23 (26)
90 PF14387 DUF4418: Domain of un 22.8 2.8E+02 0.006 20.6 5.3 47 63-109 33-79 (124)
91 PF10856 DUF2678: Protein of u 22.5 2.4E+02 0.0052 21.1 4.9 54 62-117 29-82 (118)
92 PF02285 COX8: Cytochrome oxid 22.2 41 0.0009 20.8 0.7 25 26-50 12-36 (44)
93 PLN02292 ferric-chelate reduct 21.7 36 0.00078 32.4 0.5 18 60-77 205-222 (702)
94 KOG3637 Vitronectin receptor, 21.6 79 0.0017 31.5 2.8 34 91-124 977-1010(1030)
95 PF02009 Rifin_STEVOR: Rifin/s 21.1 1.3E+02 0.0027 25.8 3.6 33 95-129 263-295 (299)
96 PF07010 Endomucin: Endomucin; 20.9 1.5E+02 0.0032 24.9 3.8 30 95-124 189-218 (259)
97 PF06422 PDR_CDR: CDR ABC tran 20.8 92 0.002 22.1 2.3 26 92-117 48-76 (103)
98 PF07856 Orai-1: Mediator of C 20.6 2.8E+02 0.0062 21.7 5.3 30 95-124 143-172 (175)
99 PTZ00046 rifin; Provisional 20.6 1E+02 0.0023 27.1 3.0 8 103-110 330-337 (358)
100 PHA02898 virion envelope prote 20.2 3.2E+02 0.0069 19.5 4.9 28 67-94 17-45 (92)
101 PLN02844 oxidoreductase/ferric 20.0 1.4E+02 0.003 28.6 4.0 21 60-80 191-211 (722)
No 1
>cd08760 Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561), including the FRRS1 gene product. Cytochrome b(561), as found in eukaryotes, similar to and including the human FRRS1 gene product (ferric-chelate reductase 1), also called SDR-2 (stromal cell-derived receptor 2). This family comprises a variety of domain architectures, many of which contain dopamine beta-monooxygenase (DOMON) domains. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.
Probab=99.80 E-value=4.6e-20 Score=144.80 Aligned_cols=112 Identities=34% Similarity=0.567 Sum_probs=97.7
Q ss_pred eeeehhhhhhhhheeccCCCCcccccchhHHHHHHHHHHHHHHHhhhccCCCCCcceeeeeeeehHHHHHHHHHHHHHhh
Q 041715 2 AFFLGTVGFGIGIRLGDLSPGVVYGLHRKLGFTAFCLGALQTLALLFRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQ 81 (150)
Q Consensus 2 ~~~l~~aGf~lGi~l~~~s~~~~~~~H~~iGiiv~~l~~lQ~l~~~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~l 81 (150)
+++++++|+++++...++......+.|+++|++++++.++||+.+++||.+.+++|.+|++.|+++||++.++|++|+++
T Consensus 79 ~~~~~i~g~~~~~~~~~~~~~~~~~~H~~lGl~~~~l~~lQ~~~G~~~~~~~~~~R~~~~~~H~~~G~~~~~l~~v~i~~ 158 (191)
T cd08760 79 AVLLAIAGFVLGIVLVQGGGGSLNNAHAILGIIVLALAILQPLLGLLRPHPGSKKRSIWNWAHRWLGRAALILAIVNIFL 158 (191)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCcCcchhhhHHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 56788999999999851222234689999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccc-cCceehhhHHHHHHHHHHHHHHH
Q 041715 82 GFEVMGEGR-SYAKLAYCLCLSTLIGVCIALEV 113 (150)
Q Consensus 82 Gl~l~~~~~-~~w~i~y~~~v~~~~~~~i~lEi 113 (150)
|+++..++. +.|.++|.++++++.++++++|.
T Consensus 159 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 191 (191)
T cd08760 159 GLDLAGAGTPKAWKIAYGVVVAVLALVYLILEI 191 (191)
T ss_pred HHHHhcCCcccchhhHHHHHHHHHHHHHHHHcC
Confidence 999995441 46889999999999999999873
No 2
>KOG4293 consensus Predicted membrane protein, contains DoH and Cytochrome b-561/ferric reductase transmembrane domains [Signal transduction mechanisms]
Probab=99.78 E-value=1.3e-20 Score=163.88 Aligned_cols=131 Identities=37% Similarity=0.672 Sum_probs=118.6
Q ss_pred CeeeehhhhhhhhheeccCCCCcccccchhHHHHHHHHHHHHHHHhhhccCCCCCcceeeeeeeehHHHHHHHHHHHHHh
Q 041715 1 PAFFLGTVGFGIGIRLGDLSPGVVYGLHRKLGFTAFCLGALQTLALLFRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVF 80 (150)
Q Consensus 1 ~~~~l~~aGf~lGi~l~~~s~~~~~~~H~~iGiiv~~l~~lQ~l~~~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~ 80 (150)
++|+++++|+..|.++.+++.+.....|+.+|+..++++++||++.++||.|++|.|++|||+||..||..+++|++|++
T Consensus 257 ~~~~~~~~~~~~g~~~~~~s~~~~~~~h~~~G~~~~~l~~lQ~~~~l~Rp~~~~k~R~~~nwyH~~~g~~~~~~~~~~i~ 336 (403)
T KOG4293|consen 257 TGFILGVAGFVDGLKLSNESDGTVYSAHTDLGIILLVLAFLQPLALLLRPLPESKIRRYWNWYHHLVGRLSIILGIVNIF 336 (403)
T ss_pred eEEEEEeeeeeeeEEEccCCCceeeeecccchhHHHHHHHHHHHHHHhcCCcccCceeccceeeeecCcceeeehhhHHh
Confidence 36889999999999999988777789999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccCce-ehhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q 041715 81 QGFEVMGEGRSYAK-LAYCLCLSTLIGVCIALEVNSWVIFCRKSKEEKLRREG 132 (150)
Q Consensus 81 lGl~l~~~~~~~w~-i~y~~~v~~~~~~~i~lEi~~~~~~~r~~~~~~~~~~~ 132 (150)
.|+++. .+...|. .+|+.+.+....+.+.+|+.+|....++.+++++++..
T Consensus 337 ~~~~l~-~~~~~w~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~ 388 (403)
T KOG4293|consen 337 DGLELL-YPGQSWIKLGYGSILAVLGLIAVILEILSWRITIERPSPSSMSRTS 388 (403)
T ss_pred hhHhhh-cCCCceEEeeeeeEEEEechhhhhhhhheeeeeecccCcccccccc
Confidence 999999 6666787 89999999999999999999988777776665555443
No 3
>smart00665 B561 Cytochrome b-561 / ferric reductase transmembrane domain. Cytochrome b-561 recycles ascorbate for the generation of norepinephrine by dopamine-beta-hydroxylase in the chromaffin vesicles of the adrenal gland. It is a transmembrane heme protein with the two heme groups being bound to conserved histidine residues. A cytochrome b-561 homologue, termed Dcytb, is an iron-regulated ferric reductase in the duodenal mucosa. Other homologues of these are also likely to be ferric reductases. SDR2 is proposed to be important in regulating the metabolism of iron in the onset of neurodegenerative disorders.
Probab=99.53 E-value=2.5e-15 Score=111.41 Aligned_cols=82 Identities=38% Similarity=0.648 Sum_probs=71.7
Q ss_pred eeeehhhhhhhhheeccCCC-CcccccchhHHHHHHHHHHHHHHHhhhccCCC---CCcceeeeeeeehHHHHHHHHHHH
Q 041715 2 AFFLGTVGFGIGIRLGDLSP-GVVYGLHRKLGFTAFCLGALQTLALLFRPKTT---NKFRKYWKSYHHFVGYACVVLGVV 77 (150)
Q Consensus 2 ~~~l~~aGf~lGi~l~~~s~-~~~~~~H~~iGiiv~~l~~lQ~l~~~~Rp~k~---~k~R~~w~~~H~~~Gr~~iiLgiv 77 (150)
+++++++|+++++...++++ ....+.|+.+|++++++.++|++.+++||.++ ++.|..|+++|++.||++.++|++
T Consensus 44 a~~~~~~g~~~~~~~~~~~~~~~~~s~H~~lGl~~~~l~~~Q~~~G~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~la~~ 123 (129)
T smart00665 44 ALVLGVIGLLAIFISHNESGIANFYSLHSWLGLAAFVLAGLQWLSGFLRPLPPGLPSKYRSYLNPYHRFVGLAAFILAIV 123 (129)
T ss_pred HHHHHHHHHHHHHHHccccCCCCccchhHHHHHHHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788999999998866532 23468999999999999999999888888776 788999999999999999999999
Q ss_pred HHhhhc
Q 041715 78 NVFQGF 83 (150)
Q Consensus 78 Ni~lGl 83 (150)
|+++|+
T Consensus 124 ~~~lG~ 129 (129)
T smart00665 124 TIFLGL 129 (129)
T ss_pred HHHccC
Confidence 999996
No 4
>PF03188 Cytochrom_B561: Eukaryotic cytochrome b561; InterPro: IPR004877 Cytochrome b561 is a secretory vesicle-specific electron transport protein []. It is an integral membrane protein, that binds two haem groups non-covalently. This entry represents the eukaryotic family. Members of the 'bacterial cytochrome b561' family can be found in IPR011577 from INTERPRO.; GO: 0016021 integral to membrane
Probab=99.28 E-value=1.6e-12 Score=96.31 Aligned_cols=83 Identities=29% Similarity=0.518 Sum_probs=68.3
Q ss_pred eeeehhhhhhhhheeccCCC-CcccccchhHHHHHHHHHHHHHHHhhhc---cCCCCCcceeeeeeeehHHHHHHHHHHH
Q 041715 2 AFFLGTVGFGIGIRLGDLSP-GVVYGLHRKLGFTAFCLGALQTLALLFR---PKTTNKFRKYWKSYHHFVGYACVVLGVV 77 (150)
Q Consensus 2 ~~~l~~aGf~lGi~l~~~s~-~~~~~~H~~iGiiv~~l~~lQ~l~~~~R---p~k~~k~R~~w~~~H~~~Gr~~iiLgiv 77 (150)
++++.++|+++.+...++.+ ....+.|..+|++++++.++|++.++++ |.++.+.|+.|+..|+++|+++.++|++
T Consensus 45 ~~~~~~~G~~~~~~~~~~~~~~h~~s~H~~lG~~~~~l~~~Q~~~G~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~l~~~ 124 (137)
T PF03188_consen 45 ALVFAIIGFVAIFINKNRNGKPHFKSWHSILGLATFVLALLQPLLGFFRFFMPGLPRKRRPIWNKWHRWLGYLIYVLAIA 124 (137)
T ss_pred HHHHHHHHHHHHHHhccccCCCCCCCchhhhhHHHHHHHHHHHHHHHHHHccCCCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778899999888765432 2235899999999999999999855443 5566778899999999999999999999
Q ss_pred HHhhhcc
Q 041715 78 NVFQGFE 84 (150)
Q Consensus 78 Ni~lGl~ 84 (150)
|+++|+.
T Consensus 125 ~i~~G~~ 131 (137)
T PF03188_consen 125 TIFLGLT 131 (137)
T ss_pred HHHHHHH
Confidence 9999994
No 5
>cd08554 Cyt_b561 Eukaryotic cytochrome b(561). Cytochrome b(561) is a family of endosomal or secretory vesicle-specific electron transport proteins. They are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. This is an exclusively eukaryotic family. Members of the prokaryotic cytochrome b561 family are not deemed homologous.
Probab=99.20 E-value=7.1e-12 Score=92.84 Aligned_cols=82 Identities=29% Similarity=0.417 Sum_probs=66.7
Q ss_pred eeeehhhhhhhhheeccCCCC-cccccchhHHHHHHHHHHHHHHHhhh---ccCCCCCcceeeeeeeehHHHHHHHHHHH
Q 041715 2 AFFLGTVGFGIGIRLGDLSPG-VVYGLHRKLGFTAFCLGALQTLALLF---RPKTTNKFRKYWKSYHHFVGYACVVLGVV 77 (150)
Q Consensus 2 ~~~l~~aGf~lGi~l~~~s~~-~~~~~H~~iGiiv~~l~~lQ~l~~~~---Rp~k~~k~R~~w~~~H~~~Gr~~iiLgiv 77 (150)
+++++++|+++++...++.+. ...+.|..+|++++++.++|++.++. .|.+..++|..++++|++.|+++.+++++
T Consensus 46 ~~~~~~~G~~~~~~~~~~~~~~h~~s~Hs~lGl~~~~l~~~q~~~G~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~la~~ 125 (131)
T cd08554 46 AFVLGLVGLLAVFLFHNAGGIANLYSLHSWLGLATVLLFLLQFLSGFVLFLLPLLRLSYRSSLLPFHRFFGLAIFVLAIA 125 (131)
T ss_pred HHHHHHHHHHHHHHhccccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 567889999999987644321 23589999999999999999975443 45555556999999999999999999999
Q ss_pred HHhhhc
Q 041715 78 NVFQGF 83 (150)
Q Consensus 78 Ni~lGl 83 (150)
|+++|.
T Consensus 126 t~~~G~ 131 (131)
T cd08554 126 TILLGI 131 (131)
T ss_pred HHHhcC
Confidence 999984
No 6
>cd08761 Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561), including the CYB561D2 gene product. Cytochrome b(561), as found in eukaryotes, similar to and including the human CYB561D2 gene product. CYB561D2 is a candidate tumor suppressor. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.
Probab=99.01 E-value=1.5e-10 Score=90.55 Aligned_cols=84 Identities=25% Similarity=0.316 Sum_probs=65.8
Q ss_pred eeeehhhhhhhhheeccCCC-CcccccchhHHHHHHHHHHHHHHHhh---hccCCC--CCcceeeeeeeehHHHHHHHHH
Q 041715 2 AFFLGTVGFGIGIRLGDLSP-GVVYGLHRKLGFTAFCLGALQTLALL---FRPKTT--NKFRKYWKSYHHFVGYACVVLG 75 (150)
Q Consensus 2 ~~~l~~aGf~lGi~l~~~s~-~~~~~~H~~iGiiv~~l~~lQ~l~~~---~Rp~k~--~k~R~~w~~~H~~~Gr~~iiLg 75 (150)
+.+++++|+++.+...++.+ ....+.|..+|++++++.++|++.++ ++|.+. .++|+.++++|++.|+++.++|
T Consensus 68 a~~~~~~G~~~~~~~~~~~~~~hf~s~H~~lGl~~~~l~~~Q~~~G~~~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~l~ 147 (183)
T cd08761 68 ALLCILAGLVAIYYNKERNGKPHFTSWHGILGLVTVILIVLQALGGLALLYPPGLRRGESKAKKLKKYHRLSGYVAYLLG 147 (183)
T ss_pred HHHHHHHHHHHHHHhcccCCCCCccchhHHHHHHHHHHHHHHHHHhHHHHhhHHHhcccccHHHHHHHHHHHHHHHHHHH
Confidence 45677888888776644322 12358999999999999999997543 344333 2678999999999999999999
Q ss_pred HHHHhhhccc
Q 041715 76 VVNVFQGFEV 85 (150)
Q Consensus 76 ivNi~lGl~l 85 (150)
++|+.+|++.
T Consensus 148 ~~t~~lGl~~ 157 (183)
T cd08761 148 LATLVLGLET 157 (183)
T ss_pred HHHHHHhcCc
Confidence 9999999977
No 7
>cd08766 Cyt_b561_ACYB-1_like Plant cytochrome b(561), including the carbon monoxide oxygenase ACYB-1. Cytochrome b(561), as found in plants, similar to the Arabidopsis thaliana ACYB-1 gene product, a cytochrome b561 isoform localized to the tonoplast. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), and might be capable of trans-membrane electron transport from intracellular ascorbate to extracellular ferric chelates. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.
Probab=98.35 E-value=2.3e-07 Score=70.98 Aligned_cols=83 Identities=27% Similarity=0.386 Sum_probs=62.3
Q ss_pred eeeehhhhhhhhheeccCCCCc-ccccchhHHHHHHHHHHHHHH-Hh--hhccCCCCCcceeeeeeeehHHHHHHHHHHH
Q 041715 2 AFFLGTVGFGIGIRLGDLSPGV-VYGLHRKLGFTAFCLGALQTL-AL--LFRPKTTNKFRKYWKSYHHFVGYACVVLGVV 77 (150)
Q Consensus 2 ~~~l~~aGf~lGi~l~~~s~~~-~~~~H~~iGiiv~~l~~lQ~l-~~--~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgiv 77 (150)
+++++++|+..-+..-++.+.. .++.|.++|++++++..+|.+ ++ ++.|......|.---.+|++.|+++.+++++
T Consensus 51 a~~~~vvGl~avf~~~~~~~~~~~~SlHSwlGl~t~~L~~lQ~~~G~~~f~~P~~~~~~r~~~~p~H~~~G~~~~~la~~ 130 (144)
T cd08766 51 ALVLGIVGIYAAFKFHNEVGIPNLYSLHSWLGIGTISLFGLQWLFGFVTFWFPGASRNTRAALLPWHVFLGLAIYYLAIA 130 (144)
T ss_pred HHHHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567778887776665543221 258899999999999999986 43 3477644444544455899999999999999
Q ss_pred HHhhhcc
Q 041715 78 NVFQGFE 84 (150)
Q Consensus 78 Ni~lGl~ 84 (150)
++.+|+.
T Consensus 131 t~~lGl~ 137 (144)
T cd08766 131 TAETGLL 137 (144)
T ss_pred HHHHHHH
Confidence 9999985
No 8
>cd08764 Cyt_b561_CG1275_like Non-vertebrate eumetazoan cytochrome b(561). Cytochrome b(561), as found in non-vertebrate eumetazoans, similar to the Drosophila melanogaster CG1275 gene product. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.
Probab=98.20 E-value=1.8e-06 Score=70.07 Aligned_cols=84 Identities=30% Similarity=0.481 Sum_probs=60.6
Q ss_pred eeeehhhhhhhhheeccCC-CCc--ccccchhHHHHHHHHHHHHHH-Hh--hhccCCCCCcceeeeeeeehHHHHHHHHH
Q 041715 2 AFFLGTVGFGIGIRLGDLS-PGV--VYGLHRKLGFTAFCLGALQTL-AL--LFRPKTTNKFRKYWKSYHHFVGYACVVLG 75 (150)
Q Consensus 2 ~~~l~~aGf~lGi~l~~~s-~~~--~~~~H~~iGiiv~~l~~lQ~l-~~--~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLg 75 (150)
+++++++|+...+..-++. .+. .++.|..+|++++++..+|.+ ++ ++.|.-....|..--.+|...|+++.+++
T Consensus 68 Al~~~ivGl~avf~~hn~~~~~~~hfySlHSwlGl~t~~L~~lQ~~~Gf~~fl~P~~~~~~r~~~~p~H~~~Gl~~fvLa 147 (214)
T cd08764 68 AFILAVIGLKAVFDSHNLAKPPIPNMYSLHSWLGLTAVILFSLQWVGGFVSFLFPGLPETLRAAYLPLHVFFGLFIFVLA 147 (214)
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHHH
Confidence 5667777776666554443 111 248899999999999999986 43 24675443345444447999999999999
Q ss_pred HHHHhhhccc
Q 041715 76 VVNVFQGFEV 85 (150)
Q Consensus 76 ivNi~lGl~l 85 (150)
++++.+|+.-
T Consensus 148 iaT~~lGl~e 157 (214)
T cd08764 148 VATALLGITE 157 (214)
T ss_pred HHHHHHHHHH
Confidence 9999999954
No 9
>cd08763 Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB561 gene product. Cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.
Probab=98.11 E-value=1.7e-06 Score=66.11 Aligned_cols=83 Identities=25% Similarity=0.313 Sum_probs=62.9
Q ss_pred eeeehhhhhhhhheeccCCCC-cccccchhHHHHHHHHHHHHHHHh---hhccCCCCCcceeeeeeeehHHHHHHHHHHH
Q 041715 2 AFFLGTVGFGIGIRLGDLSPG-VVYGLHRKLGFTAFCLGALQTLAL---LFRPKTTNKFRKYWKSYHHFVGYACVVLGVV 77 (150)
Q Consensus 2 ~~~l~~aGf~lGi~l~~~s~~-~~~~~H~~iGiiv~~l~~lQ~l~~---~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgiv 77 (150)
+++++++|...-+..-++.+. -.++.|..+|++++++..+|-+.+ ++-|....+.|..+-.+|++.|++..+++++
T Consensus 51 a~~~~~~Gl~av~~~h~~~~~~hf~SlHswlGl~t~~L~~lQ~~~G~~~f~~P~~~~~~r~~~~p~H~~~G~~~f~la~~ 130 (143)
T cd08763 51 ALVISLVGLVAVFDYHQANGYPDMYSLHSWCGILTFVLYFLQWLIGFSFFLFPGASFTLRSQYKPLHEFFGRALFLSSVG 130 (143)
T ss_pred HHHHHHHHHHHHHHHccccCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHhHHHHHHHHHHHHHHHH
Confidence 456667776666554443221 125899999999999999997632 2467655667888888899999999999999
Q ss_pred HHhhhcc
Q 041715 78 NVFQGFE 84 (150)
Q Consensus 78 Ni~lGl~ 84 (150)
+..+|+.
T Consensus 131 t~~lG~~ 137 (143)
T cd08763 131 TSLLGLT 137 (143)
T ss_pred HHHHHHH
Confidence 9999984
No 10
>PLN02680 carbon-monoxide oxygenase
Probab=98.03 E-value=3.2e-06 Score=69.37 Aligned_cols=83 Identities=24% Similarity=0.341 Sum_probs=62.4
Q ss_pred eeeehhhhhhhhheeccCCCCc-ccccchhHHHHHHHHHHHHHH-Hh--hhccCCCCCcceeeeeeeehHHHHHHHHHHH
Q 041715 2 AFFLGTVGFGIGIRLGDLSPGV-VYGLHRKLGFTAFCLGALQTL-AL--LFRPKTTNKFRKYWKSYHHFVGYACVVLGVV 77 (150)
Q Consensus 2 ~~~l~~aGf~lGi~l~~~s~~~-~~~~H~~iGiiv~~l~~lQ~l-~~--~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgiv 77 (150)
+++++++|+..-++..++++.. .++.|.++|++++++..+|.+ ++ ++-|......|...--+|.+.|+++.+|+++
T Consensus 90 A~~l~vvGl~avfk~hn~~~~~nfySlHSWlGl~t~iL~~lQ~~~Gf~~f~~P~~~~~~R~~~~p~H~~~G~~if~Laia 169 (232)
T PLN02680 90 AFCLSLIGVWAALKFHNEKGIDNFYSLHSWLGLACLFLFSLQWAAGFVTFWYPGGSRNSRASLLPWHVFFGIYIYALAVA 169 (232)
T ss_pred HHHHHHHHHHHHHHhccccCccccccHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888888877766653322 248999999999999999976 33 2467644334443346799999999999999
Q ss_pred HHhhhcc
Q 041715 78 NVFQGFE 84 (150)
Q Consensus 78 Ni~lGl~ 84 (150)
+..+|+.
T Consensus 170 T~~lG~~ 176 (232)
T PLN02680 170 TATTGIL 176 (232)
T ss_pred HHHHHHH
Confidence 9999984
No 11
>cd08765 Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBRD1 gene product. Duodenal cytochrome b or ferric-chelate reductase 3, a cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. This protein is expressed at the brush border of duodenal enterocytes and may play a role in the uptake of dietary Fe(3+), facilitating its transport into the mucosal cells. It may also be involved in the recycling of extracellular ascorbate in erythrocyte membranes, and act as a ferrireductase in epithelial cells of the respiratory system. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-me
Probab=98.00 E-value=3.6e-06 Score=65.10 Aligned_cols=83 Identities=19% Similarity=0.275 Sum_probs=61.5
Q ss_pred eeeehhhhhhhhheeccCCCC-cccccchhHHHHHHHHHHHHHH-Hh--hhccCCCCCcceeeeeeeehHHHHHHHHHHH
Q 041715 2 AFFLGTVGFGIGIRLGDLSPG-VVYGLHRKLGFTAFCLGALQTL-AL--LFRPKTTNKFRKYWKSYHHFVGYACVVLGVV 77 (150)
Q Consensus 2 ~~~l~~aGf~lGi~l~~~s~~-~~~~~H~~iGiiv~~l~~lQ~l-~~--~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgiv 77 (150)
+++++++|+..-+..-++.+. ..++.|.++|++++++..+|-+ ++ ++-|......|.-.-.+|.+.|+++.+|+++
T Consensus 58 a~~~~i~Gl~avf~~hn~~~~~~fySlHSwlGl~t~~l~~lQ~~~Gf~~f~~P~~~~~~r~~~~p~H~~~G~~i~~Lai~ 137 (153)
T cd08765 58 AFILAIISVVAVFVFHNAKNIPNMYSLHSWVGLAAVILYPLQLVLGISVYLLPVAPVRLRAALMPLHVYSGLFIFGTVIA 137 (153)
T ss_pred HHHHHHHHHHHHHHHccccCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667776666665444322 1358999999999999999976 33 2456544455666677899999999999999
Q ss_pred HHhhhcc
Q 041715 78 NVFQGFE 84 (150)
Q Consensus 78 Ni~lGl~ 84 (150)
+..+|+.
T Consensus 138 t~~lG~~ 144 (153)
T cd08765 138 TALMGIT 144 (153)
T ss_pred HHHHHHH
Confidence 9999984
No 12
>PLN02351 cytochromes b561 family protein
Probab=97.99 E-value=1.5e-05 Score=65.77 Aligned_cols=84 Identities=21% Similarity=0.223 Sum_probs=59.3
Q ss_pred eeeehhhhhhhhheeccCCCCcccccchhHHHHHHHHHHHHHH-Hhh--hccCCCCCcceeeeeeeehHHHHHHHHHHHH
Q 041715 2 AFFLGTVGFGIGIRLGDLSPGVVYGLHRKLGFTAFCLGALQTL-ALL--FRPKTTNKFRKYWKSYHHFVGYACVVLGVVN 78 (150)
Q Consensus 2 ~~~l~~aGf~lGi~l~~~s~~~~~~~H~~iGiiv~~l~~lQ~l-~~~--~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivN 78 (150)
+++++++|+..-+...++.....++.|..+|++++++..+|-+ ++. +-|......|.-.-.+|...|+...+|++++
T Consensus 94 Ali~~vvGl~a~fh~~~~~i~nlySLHSWlGl~tv~Lf~lQwv~Gf~~F~~P~~~~~~Ra~~~P~Hv~~Gl~if~LaiaT 173 (242)
T PLN02351 94 ALASGVFGIWTKFHGQDGIVANFYSLHSWMGLICVSLFGAQWLTGFMSFWHRGEMRTTRTTVLPWHVFLGLYTYGLAVAT 173 (242)
T ss_pred HHHHHHHHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHhHHHHHHHHHHHHHHHHH
Confidence 4566777777733322211111358999999999999999965 432 3454444456555678999999999999999
Q ss_pred Hhhhccc
Q 041715 79 VFQGFEV 85 (150)
Q Consensus 79 i~lGl~l 85 (150)
..+|+.-
T Consensus 174 a~lGl~E 180 (242)
T PLN02351 174 AETGLLE 180 (242)
T ss_pred HHHHHHH
Confidence 9999853
No 13
>cd08762 Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYBASC3 gene product. Cytochrome b ascorbate-dependent 3, as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.
Probab=97.84 E-value=1.2e-05 Score=63.69 Aligned_cols=83 Identities=23% Similarity=0.369 Sum_probs=63.6
Q ss_pred eeeehhhhhhhhheeccCCCCc-ccccchhHHHHHHHHHHHHHH-Hhh--hccCCCCCcceeeeeeeehHHHHHHHHHHH
Q 041715 2 AFFLGTVGFGIGIRLGDLSPGV-VYGLHRKLGFTAFCLGALQTL-ALL--FRPKTTNKFRKYWKSYHHFVGYACVVLGVV 77 (150)
Q Consensus 2 ~~~l~~aGf~lGi~l~~~s~~~-~~~~H~~iGiiv~~l~~lQ~l-~~~--~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgiv 77 (150)
+++++++|+..-+..-++++-. .++.|..+|++++++..+|-+ ++. +-|......|..--.+|...|+.+.+++++
T Consensus 81 Al~~~vvGl~avf~~hn~~~~~nlySlHSWlGl~t~~Lf~lQ~~~Gf~~f~~p~~~~~~ra~~~p~H~~~G~~if~Laia 160 (179)
T cd08762 81 AFILTVIGLCAVFNFHNVHHTANLYSLHSWVGICTVALFTCQWVMGFTSFLLPWAPMWLRALVKPIHVFFGAMILVLSIA 160 (179)
T ss_pred HHHHHHHHHHHHHHhccccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHhHHHHHHHHHHHHHHHH
Confidence 5677888888888876664311 247899999999999999975 432 345433345666688899999999999999
Q ss_pred HHhhhcc
Q 041715 78 NVFQGFE 84 (150)
Q Consensus 78 Ni~lGl~ 84 (150)
+..+|+.
T Consensus 161 t~~lGl~ 167 (179)
T cd08762 161 SCISGIN 167 (179)
T ss_pred HHHHHHH
Confidence 9999985
No 14
>PLN02810 carbon-monoxide oxygenase
Probab=97.43 E-value=0.0001 Score=60.51 Aligned_cols=84 Identities=26% Similarity=0.359 Sum_probs=65.1
Q ss_pred eeeehhhhhhhhheeccCCCC-cccccchhHHHHHHHHHHHHHH-Hh--hhccCCCCCcceeeeeeeehHHHHHHHHHHH
Q 041715 2 AFFLGTVGFGIGIRLGDLSPG-VVYGLHRKLGFTAFCLGALQTL-AL--LFRPKTTNKFRKYWKSYHHFVGYACVVLGVV 77 (150)
Q Consensus 2 ~~~l~~aGf~lGi~l~~~s~~-~~~~~H~~iGiiv~~l~~lQ~l-~~--~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgiv 77 (150)
+++++++|...-+.-.++++- ..++.|..+|++++++-.+|-+ ++ ++-|......|...-.+|...|....+++++
T Consensus 90 Al~l~vvGl~Avf~~Hn~~~i~nlySLHSWlGl~tv~Lf~lQw~~Gf~~Fl~P~~~~~~R~~~lP~Hv~~Gl~if~LAia 169 (231)
T PLN02810 90 ALILGIFGICAAFKNHNESGIANLYSLHSWLGIGIISLYGIQWIYGFIVFFFPGGSTNLRSGSLPWHVLFGLFVYILAVG 169 (231)
T ss_pred HHHHHHHHHHHHHHhccccCCCceeeHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHhHHHHHHHHHHHHHHHH
Confidence 566788888877776665431 1259999999999999999975 44 2467655556666668899999999999999
Q ss_pred HHhhhccc
Q 041715 78 NVFQGFEV 85 (150)
Q Consensus 78 Ni~lGl~l 85 (150)
+..+|+.-
T Consensus 170 ta~lGi~E 177 (231)
T PLN02810 170 NAALGFLE 177 (231)
T ss_pred HHHHHHHH
Confidence 99999853
No 15
>KOG1619 consensus Cytochrome b [Energy production and conversion]
Probab=96.57 E-value=0.0031 Score=52.15 Aligned_cols=85 Identities=25% Similarity=0.424 Sum_probs=63.6
Q ss_pred eeeehhhhhhhhheeccCCC-CcccccchhHHHHHHHHHHHHHH-Hhh--hccCCCCCcceeeeeeeehHHHHHHHHHHH
Q 041715 2 AFFLGTVGFGIGIRLGDLSP-GVVYGLHRKLGFTAFCLGALQTL-ALL--FRPKTTNKFRKYWKSYHHFVGYACVVLGVV 77 (150)
Q Consensus 2 ~~~l~~aGf~lGi~l~~~s~-~~~~~~H~~iGiiv~~l~~lQ~l-~~~--~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgiv 77 (150)
++++++.|+..-|...++.. ...++.|..+|+.++.+-.+|-+ +++ +-|--..+.|.--=..|..+|....+++++
T Consensus 99 Alvl~i~gl~avf~~hn~~~i~NfySLHSWlGl~~v~ly~~Q~v~GF~tfl~pg~~~~~Rs~lmP~H~~~Gl~~f~lai~ 178 (245)
T KOG1619|consen 99 ALVLAIIGLCAVFDSHNLVGIANFYSLHSWLGLCVVILYSLQWVFGFFTFLFPGSPESYRSRLMPWHVFLGLAIFILAIV 178 (245)
T ss_pred HHHHHHHHHHHHHHHhhhcCccceeeHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccHHhhhhhHHHHHHHHHHHHHHH
Confidence 45567777777676665533 11358999999999999999964 543 345544566777777899999999999999
Q ss_pred HHhhhcccc
Q 041715 78 NVFQGFEVM 86 (150)
Q Consensus 78 Ni~lGl~l~ 86 (150)
+.-+|+...
T Consensus 179 ta~~Gl~ek 187 (245)
T KOG1619|consen 179 TALTGLLEK 187 (245)
T ss_pred HHHHHHHHH
Confidence 999999433
No 16
>PF10348 DUF2427: Domain of unknown function (DUF2427); InterPro: IPR018825 This entry represents the N-terminal region of a family of proteins conserved in fungi. Several of these proteins are annotated as being Ftp1 but this could not be confirmed. Their function is not known.
Probab=96.47 E-value=0.0017 Score=47.11 Aligned_cols=47 Identities=21% Similarity=0.331 Sum_probs=37.5
Q ss_pred eeeehhhhhhhhheeccCCCCc-ccccchhHHHHHHHHHHHHHHHhhh
Q 041715 2 AFFLGTVGFGIGIRLGDLSPGV-VYGLHRKLGFTAFCLGALQTLALLF 48 (150)
Q Consensus 2 ~~~l~~aGf~lGi~l~~~s~~~-~~~~H~~iGiiv~~l~~lQ~l~~~~ 48 (150)
++++.++|+.+|....++.+++ ..+.|.++|.++++++++|++.+++
T Consensus 54 ~~~l~~~g~~~g~~~~~~~p~lyp~n~H~k~g~il~~l~~~q~~~gv~ 101 (105)
T PF10348_consen 54 FLVLMILGLFLGSVYNGSTPDLYPNNAHGKMGWILFVLMIVQVILGVI 101 (105)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567889999999887765443 5799999999999999999975543
No 17
>smart00665 B561 Cytochrome b-561 / ferric reductase transmembrane domain. Cytochrome b-561 recycles ascorbate for the generation of norepinephrine by dopamine-beta-hydroxylase in the chromaffin vesicles of the adrenal gland. It is a transmembrane heme protein with the two heme groups being bound to conserved histidine residues. A cytochrome b-561 homologue, termed Dcytb, is an iron-regulated ferric reductase in the duodenal mucosa. Other homologues of these are also likely to be ferric reductases. SDR2 is proposed to be important in regulating the metabolism of iron in the onset of neurodegenerative disorders.
Probab=89.98 E-value=1.7 Score=31.71 Aligned_cols=30 Identities=23% Similarity=0.404 Sum_probs=18.2
Q ss_pred ceeeeeeeehHHHHHHHHHHHHHhhhcccc
Q 041715 57 RKYWKSYHHFVGYACVVLGVVNVFQGFEVM 86 (150)
Q Consensus 57 R~~w~~~H~~~Gr~~iiLgivNi~lGl~l~ 86 (150)
++.|..+|+...-++.+++++.+..++..-
T Consensus 30 ~~~~~~~H~~lq~~a~~~~~~g~~~~~~~~ 59 (129)
T smart00665 30 KPTWFLLHVVLQILALVLGVIGLLAIFISH 59 (129)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 455666666666666666666666655444
No 18
>cd08554 Cyt_b561 Eukaryotic cytochrome b(561). Cytochrome b(561) is a family of endosomal or secretory vesicle-specific electron transport proteins. They are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. This is an exclusively eukaryotic family. Members of the prokaryotic cytochrome b561 family are not deemed homologous.
Probab=87.88 E-value=3.6 Score=29.96 Aligned_cols=58 Identities=24% Similarity=0.224 Sum_probs=37.2
Q ss_pred ccchhHHHHHHHHHHHHHHHhh-hccCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhcccc
Q 041715 26 GLHRKLGFTAFCLGALQTLALL-FRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFEVM 86 (150)
Q Consensus 26 ~~H~~iGiiv~~l~~lQ~l~~~-~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~l~ 86 (150)
+.|+.+=. +++.+++|.+.+ .|+.+.. .|+.|.+.|+.+.-.+.+++++-...++...
T Consensus 3 ~~H~~lm~--~g~~~l~~~~il~~r~~~~~-~~~~~~~~H~~l~~l~~~~~~~G~~~~~~~~ 61 (131)
T cd08554 3 NWHPLLMV--IGFVFLMGEALLVYRVFRLL-TKRALKLLHAILHLLAFVLGLVGLLAVFLFH 61 (131)
T ss_pred CccHHHHH--HHHHHHHHHHHHHhcccccc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56776533 334456666443 4664332 3567778888888888888887777777655
No 19
>PRK09546 zntB zinc transporter; Reviewed
Probab=87.09 E-value=1.7 Score=36.66 Aligned_cols=43 Identities=7% Similarity=0.016 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhhhcccccccccCceehhhHHHHHHHHHHHHH
Q 041715 69 YACVVLGVVNVFQGFEVMGEGRSYAKLAYCLCLSTLIGVCIAL 111 (150)
Q Consensus 69 r~~iiLgivNi~lGl~l~~~~~~~w~i~y~~~v~~~~~~~i~l 111 (150)
.+.+.+.+++++.||+..+-|...|.++|..++++++++.+++
T Consensus 272 ~IflPlT~IaGiyGMNf~~mPel~~~~gy~~~l~im~~i~~~~ 314 (324)
T PRK09546 272 MVFLPTTFLTGLFGVNLGGIPGGGWPFGFSIFCLLLVVLIGGV 314 (324)
T ss_pred HHHHHHHHHHhhhccccCCCCCcCCcchHHHHHHHHHHHHHHH
Confidence 4566678899999999876666678888887777777766654
No 20
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA). The article in Microb Comp Genomics 1998;3(3):151-69 (Medline:98448512) discusses this family and suggests that some members may have functions other than Mg2+ transport.
Probab=85.99 E-value=2 Score=35.65 Aligned_cols=42 Identities=12% Similarity=0.057 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhhhcccccccccCceehhhHHHHHHHHHHHH
Q 041715 69 YACVVLGVVNVFQGFEVMGEGRSYAKLAYCLCLSTLIGVCIA 110 (150)
Q Consensus 69 r~~iiLgivNi~lGl~l~~~~~~~w~i~y~~~v~~~~~~~i~ 110 (150)
-+.+.+.+++++.||+..+-|...|.++|..++++++++.++
T Consensus 266 ~IflP~t~IaGiyGMNf~~mP~l~~~~gy~~~l~~m~~i~~~ 307 (318)
T TIGR00383 266 TIFIPLTFIAGIYGMNFKFMPELNWKYGYPAVLIVMAVIALG 307 (318)
T ss_pred HHHHHHHHHHHHHhCCcccCccccchhHHHHHHHHHHHHHHH
Confidence 455667888899999987666667888998888888777765
No 21
>COG5658 Predicted integral membrane protein [Function unknown]
Probab=85.78 E-value=1.7 Score=35.26 Aligned_cols=67 Identities=12% Similarity=0.064 Sum_probs=40.4
Q ss_pred CcceeeeeeeehHHHHHHHHHHHHHhhhcccccccccCceehhhHHHHHHHHHHHHHHHHHhhhhhhh
Q 041715 55 KFRKYWKSYHHFVGYACVVLGVVNVFQGFEVMGEGRSYAKLAYCLCLSTLIGVCIALEVNSWVIFCRK 122 (150)
Q Consensus 55 k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~l~~~~~~~w~i~y~~~v~~~~~~~i~lEi~~~~~~~r~ 122 (150)
+.+..|+..|...|-.+++-+.+...-++... .+..-+...+...++......+.+-++.+.+..++
T Consensus 40 ~d~~~wk~a~~~l~pl~vi~gl~~~~~~~l~~-~~~~~~~~v~~~~~~~Il~li~~ls~~l~~~g~d~ 106 (204)
T COG5658 40 PDQAMWKKAGLFLGPLLVIGGLVTRYMSLLAG-GQGQMLLAVALFAAVLILFLILLLSAILVALGYDI 106 (204)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 55678999999999999999998888887555 33323334444333333333333333444444333
No 22
>PF13301 DUF4079: Protein of unknown function (DUF4079)
Probab=85.72 E-value=1.2 Score=35.15 Aligned_cols=64 Identities=25% Similarity=0.312 Sum_probs=44.9
Q ss_pred ccchhHHHHHHHHHHHHHHHhhh---ccCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhcccccccccCce
Q 041715 26 GLHRKLGFTAFCLGALQTLALLF---RPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFEVMGEGRSYAK 94 (150)
Q Consensus 26 ~~H~~iGiiv~~l~~lQ~l~~~~---Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~l~~~~~~~w~ 94 (150)
..|+.+|.+++++..+-.++... +.. + ++|.-.|.|.|-.+..|-.+|..+.-++..++++.|+
T Consensus 81 ~~H~~~g~~ll~~~~L~~lGG~~~~~~~~--~---~lf~spH~~~Gl~~~~L~~~s~al~~~i~~g~~~~~R 147 (175)
T PF13301_consen 81 DRHYRLGFALLAFMGLGALGGQLGTYRQN--G---KLFWSPHLWAGLAVVGLMAFSAALVPQIQKGNRPWAR 147 (175)
T ss_pred HHHHHHHHHHHHHHHHHHHcchHHHHHcC--C---CCccCchHHHHHHHHHHHHHHHHHHHHHccCCchhHH
Confidence 57889998888888777764432 221 1 1666669999988888888888888888754443454
No 23
>PF10951 DUF2776: Protein of unknown function (DUF2776); InterPro: IPR021240 This bacterial family of proteins has no known function.
Probab=84.13 E-value=1.5 Score=37.73 Aligned_cols=114 Identities=16% Similarity=0.161 Sum_probs=60.2
Q ss_pred eehhhhhhhhheeccCCC---CcccccchhHHHHHHHHHHHHHHHhhh---ccCCCCCcceeeeeeeehHHHHHHHHHHH
Q 041715 4 FLGTVGFGIGIRLGDLSP---GVVYGLHRKLGFTAFCLGALQTLALLF---RPKTTNKFRKYWKSYHHFVGYACVVLGVV 77 (150)
Q Consensus 4 ~l~~aGf~lGi~l~~~s~---~~~~~~H~~iGiiv~~l~~lQ~l~~~~---Rp~k~~k~R~~w~~~H~~~Gr~~iiLgiv 77 (150)
++.+.||+-++.+-.+++ .+..--|.-.|+.+.|-.++-..+-+. |..-++|.|+.|.+.-...|.+.+++|+.
T Consensus 163 ~~~li~~iw~~~Ll~~~~~~p~y~VAGhVm~Gla~iCtsLIaLVAtI~RQirN~ys~~Er~~W~~lVl~mGsi~~l~Gl~ 242 (347)
T PF10951_consen 163 LCALIGWIWAIVLLSSSDEHPAYFVAGHVMFGLACICTSLIALVATIARQIRNTYSEKERWKWPKLVLVMGSISILWGLY 242 (347)
T ss_pred HHHHHHHHHHHHHHHhcCCCccceehhHHHhhHHHHHHHHHHHHHHHHHHHhccccHHHhhhhHHHHHHHhhHHHHhhhh
Confidence 456788888888754322 211245888888888866655544443 45555678888876554444444444433
Q ss_pred HHhhhcccccccccCceehhhHHHHHHHHHHHHHHHHHhhh
Q 041715 78 NVFQGFEVMGEGRSYAKLAYCLCLSTLIGVCIALEVNSWVI 118 (150)
Q Consensus 78 Ni~lGl~l~~~~~~~w~i~y~~~v~~~~~~~i~lEi~~~~~ 118 (150)
-++..-+-. ...+++.-.-.+.++.-...=++|-..-|+.
T Consensus 243 vl~~~~~~~-~~~~G~ilIGLGlvCySIsSKViLLA~vWr~ 282 (347)
T PF10951_consen 243 VLLASSGPA-NNAPGYILIGLGLVCYSISSKVILLAKVWRR 282 (347)
T ss_pred eEEecCCcc-cCCcceeeeehhhHHHHHHHHHHHHHHHHHh
Confidence 222211111 1113454333344555555445554445643
No 24
>PF13301 DUF4079: Protein of unknown function (DUF4079)
Probab=82.68 E-value=3.5 Score=32.51 Aligned_cols=60 Identities=13% Similarity=0.259 Sum_probs=45.4
Q ss_pred cccccchhHHHHHHHHHHHHHH-HhhhccCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhcccc
Q 041715 23 VVYGLHRKLGFTAFCLGALQTL-ALLFRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFEVM 86 (150)
Q Consensus 23 ~~~~~H~~iGiiv~~l~~lQ~l-~~~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~l~ 86 (150)
...++|-.-|+++..|..++.. .-...+.+ +.-|...|...+-+++.+=.....+|.++.
T Consensus 112 lf~spH~~~Gl~~~~L~~~s~al~~~i~~g~----~~~~R~lHi~lN~~~l~Lf~~q~itG~~il 172 (175)
T PF13301_consen 112 LFWSPHLWAGLAVVGLMAFSAALVPQIQKGN----RPWARRLHIYLNSLALLLFAWQAITGWRIL 172 (175)
T ss_pred CccCchHHHHHHHHHHHHHHHHHHHHHccCC----chhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3468899999999999988864 33333332 234455799999999999999999998765
No 25
>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism]
Probab=81.27 E-value=3.3 Score=35.01 Aligned_cols=46 Identities=15% Similarity=0.189 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHHHHhhhcccccccccCceehhhHHHHHHHHHHHHH
Q 041715 66 FVGYACVVLGVVNVFQGFEVMGEGRSYAKLAYCLCLSTLIGVCIAL 111 (150)
Q Consensus 66 ~~Gr~~iiLgivNi~lGl~l~~~~~~~w~i~y~~~v~~~~~~~i~l 111 (150)
.+..+.+.+-+++++.||+..+-|.-.|.++|-.++++++++.+++
T Consensus 267 i~s~iflPpTlIagiyGMNf~~mPel~~~~Gy~~~l~~m~~~~~~~ 312 (322)
T COG0598 267 IVSTIFLPPTLITGFYGMNFKGMPELDWPYGYPIALILMLLLALLL 312 (322)
T ss_pred HHHHHHHhhHHHHcccccCCCCCcCCCCcccHHHHHHHHHHHHHHH
Confidence 3456677788899999999996576678889888888888877775
No 26
>PF03188 Cytochrom_B561: Eukaryotic cytochrome b561; InterPro: IPR004877 Cytochrome b561 is a secretory vesicle-specific electron transport protein []. It is an integral membrane protein, that binds two haem groups non-covalently. This entry represents the eukaryotic family. Members of the 'bacterial cytochrome b561' family can be found in IPR011577 from INTERPRO.; GO: 0016021 integral to membrane
Probab=81.20 E-value=9 Score=27.76 Aligned_cols=29 Identities=31% Similarity=0.548 Sum_probs=16.9
Q ss_pred eeeeeeeehHHHHHHHHHHHHHhhhcccc
Q 041715 58 KYWKSYHHFVGYACVVLGVVNVFQGFEVM 86 (150)
Q Consensus 58 ~~w~~~H~~~Gr~~iiLgivNi~lGl~l~ 86 (150)
+-++-.|-++|-+++++.+.+...|+-..
T Consensus 66 ~h~~s~H~~lG~~~~~l~~~Q~~~G~~~~ 94 (137)
T PF03188_consen 66 PHFKSWHSILGLATFVLALLQPLLGFFRF 94 (137)
T ss_pred CCCCCchhhhhHHHHHHHHHHHHHHHHHH
Confidence 34455566666666666666666665543
No 27
>cd08766 Cyt_b561_ACYB-1_like Plant cytochrome b(561), including the carbon monoxide oxygenase ACYB-1. Cytochrome b(561), as found in plants, similar to the Arabidopsis thaliana ACYB-1 gene product, a cytochrome b561 isoform localized to the tonoplast. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), and might be capable of trans-membrane electron transport from intracellular ascorbate to extracellular ferric chelates. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.
Probab=80.68 E-value=13 Score=28.42 Aligned_cols=59 Identities=22% Similarity=0.448 Sum_probs=37.2
Q ss_pred cccccchhHHHHHHHHHHHHHHHhhhccCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhcc
Q 041715 23 VVYGLHRKLGFTAFCLGALQTLALLFRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFE 84 (150)
Q Consensus 23 ~~~~~H~~iGiiv~~l~~lQ~l~~~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~ 84 (150)
..++.||.+=.+-+++..-|.+ +.+|+.|.+ |+.+..+|+.+--.+++++++-+..=++
T Consensus 6 ~~Fn~HP~lM~~gfi~l~~eAi-L~~r~~~~~--k~~~k~iH~~l~~la~~~~vvGl~avf~ 64 (144)
T cd08766 6 LIFNVHPVLMVIGFIFLAGEAI-LAYKTVPGS--REVQKAVHLTLHLVALVLGIVGIYAAFK 64 (144)
T ss_pred ceeeccHHHHHHHHHHHHHHHH-HHhhccccc--cchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3468999876655544444443 234665543 4456678998888888887776655443
No 28
>PF00033 Cytochrom_B_N: Cytochrome b(N-terminal)/b6/petB; InterPro: IPR016174 This entry represents a haem-binding domain with a 4-helical bundle structure that is found in transmembrane di-haem cytochromes. The domain contains four transmembrane helices in an up-and-down bundle, and binds two haem groups in between the helices; three of the four haem-binding residues is conserved between family members. Proteins containing this domain include: N-terminal domain of mitochondrial cytochrome b subunit, in which the domain contains an extra transmembrane linker helix that is absent in plant and cyanobacteria subunits []. Cytochrome b6 subunit of the cytochrome b6f complex, which provides the electronic connection between the photosystems I and II reaction centres of oxygenic photosynthesis, and generates a transmembrane electrochemical proton gradient for adenosine triphosphate synthesis []. Cytochrome gamma subunit of formate dehydrogenase-N (Fdn-N), which acts as a major component of Escherichia coli nitrate respiration []. ; GO: 0022904 respiratory electron transport chain, 0016020 membrane; PDB: 1KQG_C 1KQF_C.
Probab=80.50 E-value=1.8 Score=32.44 Aligned_cols=61 Identities=23% Similarity=0.275 Sum_probs=43.4
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhc--------------------cCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhcc
Q 041715 25 YGLHRKLGFTAFCLGALQTLALLFR--------------------PKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFE 84 (150)
Q Consensus 25 ~~~H~~iGiiv~~l~~lQ~l~~~~R--------------------p~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~ 84 (150)
...|..+|++.+++..+..+..+.+ +.++.+.+.-+|....+.-.+...+.++-...|+-
T Consensus 47 ~~~H~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iTG~~ 126 (188)
T PF00033_consen 47 RWLHFSLGIVFLALFLLRILWRLFSRRFWKSDDIWFRQIPQYRLFPRKPPPPSGKYNPLQKLVYWALYLLLLLMAITGLI 126 (188)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGT---GGGHHHHHSHHHHHTT-HHHH----SS-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4899999999999999998866655 22222334455777777888888888888888888
Q ss_pred c
Q 041715 85 V 85 (150)
Q Consensus 85 l 85 (150)
+
T Consensus 127 ~ 127 (188)
T PF00033_consen 127 M 127 (188)
T ss_dssp C
T ss_pred H
Confidence 8
No 29
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=79.88 E-value=3.3 Score=25.98 Aligned_cols=31 Identities=13% Similarity=-0.014 Sum_probs=22.1
Q ss_pred Cce-ehhhHHHHHHHHHHHHHHHHHhhhhhhh
Q 041715 92 YAK-LAYCLCLSTLIGVCIALEVNSWVIFCRK 122 (150)
Q Consensus 92 ~w~-i~y~~~v~~~~~~~i~lEi~~~~~~~r~ 122 (150)
.|. +.+++++.....+|+.+-+++....-|.
T Consensus 3 ~wlt~iFsvvIil~If~~iGl~IyQkikqIrg 34 (49)
T PF11044_consen 3 TWLTTIFSVVIILGIFAWIGLSIYQKIKQIRG 34 (49)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 464 7788888888888888888775544343
No 30
>PF10067 DUF2306: Predicted membrane protein (DUF2306); InterPro: IPR018750 Members of this family of hypothetical bacterial proteins have no known function.
Probab=78.90 E-value=6.6 Score=27.89 Aligned_cols=28 Identities=11% Similarity=0.172 Sum_probs=22.4
Q ss_pred eeeeeehHHHHHHHHHHHHHhhhccccc
Q 041715 60 WKSYHHFVGYACVVLGVVNVFQGFEVMG 87 (150)
Q Consensus 60 w~~~H~~~Gr~~iiLgivNi~lGl~l~~ 87 (150)
+...|++.||+-+.+..+....|+-+..
T Consensus 5 ~~~~HR~lGrvyv~~~~~~a~sa~~i~~ 32 (103)
T PF10067_consen 5 GPRLHRWLGRVYVAAMLISALSALFIAF 32 (103)
T ss_pred cccHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 3456999999988888888888887763
No 31
>PLN02680 carbon-monoxide oxygenase
Probab=78.81 E-value=12 Score=30.96 Aligned_cols=58 Identities=14% Similarity=0.301 Sum_probs=33.5
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhccCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhcc
Q 041715 24 VYGLHRKLGFTAFCLGALQTLALLFRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFE 84 (150)
Q Consensus 24 ~~~~H~~iGiiv~~l~~lQ~l~~~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~ 84 (150)
.++.||.+=.+-+++..-|.+ ...|+.+.+ |+....+|+.+--.+++++++-+..=++
T Consensus 46 ~Fn~HPlLM~~Gfi~l~geAI-L~yr~~~~~--k~~~K~iH~~L~~lA~~l~vvGl~avfk 103 (232)
T PLN02680 46 IFNVHPVLMVIGLVLLNGEAM-LAYKTVPGT--KNLKKLVHLTLQFLAFCLSLIGVWAALK 103 (232)
T ss_pred eEechHHHHHHHHHHHHHHHH-hcccccccc--chhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999876655554332333 224655443 3345667777777777776666655444
No 32
>cd08760 Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561), including the FRRS1 gene product. Cytochrome b(561), as found in eukaryotes, similar to and including the human FRRS1 gene product (ferric-chelate reductase 1), also called SDR-2 (stromal cell-derived receptor 2). This family comprises a variety of domain architectures, many of which contain dopamine beta-monooxygenase (DOMON) domains. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.
Probab=78.72 E-value=19 Score=27.83 Aligned_cols=59 Identities=15% Similarity=0.131 Sum_probs=37.8
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhccCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhcccc
Q 041715 25 YGLHRKLGFTAFCLGALQTLALLFRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFEVM 86 (150)
Q Consensus 25 ~~~H~~iGiiv~~l~~lQ~l~~~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~l~ 86 (150)
...|..+=++.+++++.=....+..- .+.++.++-.|.++|-+++++.+++...|+-..
T Consensus 69 ~~~H~~~q~~~~~~~i~g~~~~~~~~---~~~~~~~~~~H~~lGl~~~~l~~lQ~~~G~~~~ 127 (191)
T cd08760 69 FYLHAGLQLLAVLLAIAGFVLGIVLV---QGGGGSLNNAHAILGIIVLALAILQPLLGLLRP 127 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh---ccCCCCCcCcchhhhHHHHHHHHHHHHHHHhcC
Confidence 46777776655555544432222211 223456777888888888888888888888666
No 33
>cd08764 Cyt_b561_CG1275_like Non-vertebrate eumetazoan cytochrome b(561). Cytochrome b(561), as found in non-vertebrate eumetazoans, similar to the Drosophila melanogaster CG1275 gene product. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.
Probab=76.81 E-value=16 Score=29.72 Aligned_cols=58 Identities=19% Similarity=0.271 Sum_probs=34.9
Q ss_pred ccccchhHHHHHHHHHHHHHHH-hhhccCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhcc
Q 041715 24 VYGLHRKLGFTAFCLGALQTLA-LLFRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFE 84 (150)
Q Consensus 24 ~~~~H~~iGiiv~~l~~lQ~l~-~~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~ 84 (150)
.++.||.+=.+-++ ++|.-+ +..|+.+..+ +..+..+|+.+.-.+++++++-+..-++
T Consensus 23 ~Fn~HP~lM~~Gfi--~l~geAiLvyr~~~~~~-k~~~k~~H~~L~~lAl~~~ivGl~avf~ 81 (214)
T cd08764 23 QFNWHPLLMVLGLI--FLYGNSILVYRVFRNTR-KKRLKLLHAVLHLLAFILAVIGLKAVFD 81 (214)
T ss_pred eEeecHHHHHHHHH--HHHHHHHHHhccCcccc-chhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889876544333 344433 2345555433 3335778888888888888777554443
No 34
>cd08761 Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561), including the CYB561D2 gene product. Cytochrome b(561), as found in eukaryotes, similar to and including the human CYB561D2 gene product. CYB561D2 is a candidate tumor suppressor. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.
Probab=76.31 E-value=24 Score=27.20 Aligned_cols=58 Identities=21% Similarity=0.188 Sum_probs=37.3
Q ss_pred cccchhHHHHHHHHHHHHHHHhh-hccCCCC--CcceeeeeeeehHHHHHHHHHHHHHhhhcc
Q 041715 25 YGLHRKLGFTAFCLGALQTLALL-FRPKTTN--KFRKYWKSYHHFVGYACVVLGVVNVFQGFE 84 (150)
Q Consensus 25 ~~~H~~iGiiv~~l~~lQ~l~~~-~Rp~k~~--k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~ 84 (150)
.+.|+.+=.+.+ .+++|.+.+ +||.... +.|+.|.+.|+.+.-.+.+++++-....+.
T Consensus 21 f~~Hp~~m~i~~--~~l~~~~il~~~~~~~~~~~~~~~~~~~H~~l~~la~~~~~~G~~~~~~ 81 (183)
T cd08761 21 FSWHPLLMSLGF--LLLMTEALLLLQPTSSLTKLARKTKVRLHWILQLLALLCILAGLVAIYY 81 (183)
T ss_pred eehhHHHHHHHH--HHHHHHHHHHhcCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 588988654443 345555444 5654221 356777888999888888887766655553
No 35
>cd08762 Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYBASC3 gene product. Cytochrome b ascorbate-dependent 3, as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.
Probab=74.84 E-value=19 Score=28.61 Aligned_cols=62 Identities=19% Similarity=0.213 Sum_probs=39.0
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhc-cCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhcccc
Q 041715 24 VYGLHRKLGFTAFCLGALQTLALLFR-PKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFEVM 86 (150)
Q Consensus 24 ~~~~H~~iGiiv~~l~~lQ~l~~~~R-p~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~l~ 86 (150)
.++.||.+=.+-+++..-|.+. ..| |......|..+..+|..+--.+++++++.+..-++--
T Consensus 34 ~Fn~HP~lMv~Gfi~L~geAiL-~Yr~~~~~~~~k~~~K~~H~~L~~~Al~~~vvGl~avf~~h 96 (179)
T cd08762 34 NFNWHPVLMVTGMVVLYGNAAL-VYRIPLTWGGPKLPWKLLHAGLLLLAFILTVIGLCAVFNFH 96 (179)
T ss_pred ceeehHHHHHHHHHHHHHHHHH-hhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4689998754444433333332 234 4432233455668999999999999988887766554
No 36
>cd08765 Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBRD1 gene product. Duodenal cytochrome b or ferric-chelate reductase 3, a cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. This protein is expressed at the brush border of duodenal enterocytes and may play a role in the uptake of dietary Fe(3+), facilitating its transport into the mucosal cells. It may also be involved in the recycling of extracellular ascorbate in erythrocyte membranes, and act as a ferrireductase in epithelial cells of the respiratory system. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-me
Probab=74.39 E-value=24 Score=27.22 Aligned_cols=60 Identities=17% Similarity=0.154 Sum_probs=37.1
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhccCCCC-CcceeeeeeeehHHHHHHHHHHHHHhhhcc
Q 041715 24 VYGLHRKLGFTAFCLGALQTLALLFRPKTTN-KFRKYWKSYHHFVGYACVVLGVVNVFQGFE 84 (150)
Q Consensus 24 ~~~~H~~iGiiv~~l~~lQ~l~~~~Rp~k~~-k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~ 84 (150)
.++.||.+=.+-+.+..-|.+ +.+|+.+.. ..|+....+|+++--++++++++.+..=++
T Consensus 11 ~Fn~HPlLm~~Gfi~l~geAi-L~yr~~~~~~~~k~~~k~iH~~L~~~a~~~~i~Gl~avf~ 71 (153)
T cd08765 11 EFNWHPVLMVIGFIFIQGIAI-IVYRLPWTWKCSKLLMKLIHAGLHILAFILAIISVVAVFV 71 (153)
T ss_pred eeechHHHHHHHHHHHHHHHH-HHhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999876665555333333 334643322 234567888999888888887776654443
No 37
>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT
Probab=71.55 E-value=7.5 Score=28.32 Aligned_cols=32 Identities=19% Similarity=0.221 Sum_probs=23.7
Q ss_pred ehhhHHHHHHHHHHHHHHHHHhhhhhhhhhhh
Q 041715 95 LAYCLCLSTLIGVCIALEVNSWVIFCRKSKEE 126 (150)
Q Consensus 95 i~y~~~v~~~~~~~i~lEi~~~~~~~r~~~~~ 126 (150)
|+..++++++.++.++.-+..|+|+.|++|..
T Consensus 1 w~Ll~il~llLll~l~asl~~wr~~~rq~k~~ 32 (107)
T PF15330_consen 1 WLLLGILALLLLLSLAASLLAWRMKQRQKKAG 32 (107)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 34556777777888888888999997776633
No 38
>cd08763 Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB561 gene product. Cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.
Probab=70.83 E-value=35 Score=25.96 Aligned_cols=59 Identities=14% Similarity=0.206 Sum_probs=35.3
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhccCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhcc
Q 041715 24 VYGLHRKLGFTAFCLGALQTLALLFRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFE 84 (150)
Q Consensus 24 ~~~~H~~iGiiv~~l~~lQ~l~~~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~ 84 (150)
.++.||.+=.+-+.+..-|.+... |..+..+ |+....+|+.++-++++++++-+..=++
T Consensus 6 ~Fn~HP~lm~~G~i~l~geaiL~~-~~~~~~~-k~~~k~~H~~L~~la~~~~~~Gl~av~~ 64 (143)
T cd08763 6 QFNVHPLCMVLGLVFLCGEALLVY-RVFRNET-KRSTKILHGLLHIMALVISLVGLVAVFD 64 (143)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHh-ccccccc-cchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899876655555444443322 3222222 3335668999988888888776665443
No 39
>PF13172 PepSY_TM_1: PepSY-associated TM helix
Probab=70.47 E-value=1.8 Score=24.88 Aligned_cols=30 Identities=20% Similarity=0.581 Sum_probs=20.2
Q ss_pred ceeeeeeeehHHHHHHHHHHHHHhhhcccc
Q 041715 57 RKYWKSYHHFVGYACVVLGVVNVFQGFEVM 86 (150)
Q Consensus 57 R~~w~~~H~~~Gr~~iiLgivNi~lGl~l~ 86 (150)
|+.|...|.+.|..+.+.-++-...|.-+.
T Consensus 2 r~~~~~~H~~~g~~~~~~ll~~~lTG~~l~ 31 (34)
T PF13172_consen 2 RKFWRKIHRWLGLIAAIFLLLLALTGALLN 31 (34)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 556666777777777777766666666443
No 40
>PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ]. CorA is virtually ubiquitous in the Bacteria and Archaea. There are also eukaryotic relatives of this protein. Transporter ZntB mediates efflux of zinc ions [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 2HN1_A 3NWI_D 3NVO_B 3CK6_A 2IUB_E 2BBJ_E 2HN2_A 2BBH_A.
Probab=70.18 E-value=6.2 Score=31.60 Aligned_cols=35 Identities=14% Similarity=0.124 Sum_probs=21.2
Q ss_pred hHHHHHHHHHHHHHhhhcccccccccCceehhhHH
Q 041715 66 FVGYACVVLGVVNVFQGFEVMGEGRSYAKLAYCLC 100 (150)
Q Consensus 66 ~~Gr~~iiLgivNi~lGl~l~~~~~~~w~i~y~~~ 100 (150)
.+.-+.+-+.+++++.||+..+-|...|.+.|..+
T Consensus 239 ~~t~iflPlt~i~g~fGMN~~~~p~~~~~~g~~~~ 273 (292)
T PF01544_consen 239 IVTAIFLPLTFITGIFGMNFKGMPELDWPYGYFFV 273 (292)
T ss_dssp HHHHHHHHHHHHTTSTTS-SS---SSSSSS-SHHH
T ss_pred HHHHHHHHHHHHHHHhhCCccCCCccCCccHHHHH
Confidence 34555566788999999998866665677655555
No 41
>PF13630 SdpI: SdpI/YhfL protein family
Probab=69.96 E-value=2 Score=28.24 Aligned_cols=32 Identities=28% Similarity=0.578 Sum_probs=28.5
Q ss_pred CcceeeeeeeehHHHHHHHHHHHHHhhhcccc
Q 041715 55 KFRKYWKSYHHFVGYACVVLGVVNVFQGFEVM 86 (150)
Q Consensus 55 k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~l~ 86 (150)
+....|+..|+..|+..++.|++.+..++-+.
T Consensus 18 ~s~~~W~~a~r~~g~~~~~~Gi~~~~~~~~~~ 49 (76)
T PF13630_consen 18 KSDENWKKAHRFAGKIFIIGGIVLLIIGIIIL 49 (76)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999999999999999999888766
No 42
>PRK11085 magnesium/nickel/cobalt transporter CorA; Provisional
Probab=68.95 E-value=10 Score=32.38 Aligned_cols=43 Identities=12% Similarity=-0.041 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhhhcccccccccCceehhhHHHHHHHHHHHH
Q 041715 68 GYACVVLGVVNVFQGFEVMGEGRSYAKLAYCLCLSTLIGVCIA 110 (150)
Q Consensus 68 Gr~~iiLgivNi~lGl~l~~~~~~~w~i~y~~~v~~~~~~~i~ 110 (150)
--+.+.+.+++++.||+..+-|...|.++|...+++++++.++
T Consensus 263 s~if~pptliagiyGMNf~~mP~~~~~~g~~~~l~~~~~~~~~ 305 (316)
T PRK11085 263 SVVFLPPTLVASSYGMNFEFMPELKWSFGYPGAIILMILAGLA 305 (316)
T ss_pred HHHHHHHHHHHhhcccccCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 3456667788889999977556666888887777777766654
No 43
>COG1294 AppB Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]
Probab=67.50 E-value=24 Score=30.80 Aligned_cols=84 Identities=15% Similarity=0.286 Sum_probs=49.3
Q ss_pred HHHHHHHHHHhhhccCCCC-CcceeeeeeeehHH---HHHHHHHHHHHhhhcccccccc-c--Ccee---hhhHHHHHHH
Q 041715 36 FCLGALQTLALLFRPKTTN-KFRKYWKSYHHFVG---YACVVLGVVNVFQGFEVMGEGR-S--YAKL---AYCLCLSTLI 105 (150)
Q Consensus 36 ~~l~~lQ~l~~~~Rp~k~~-k~R~~w~~~H~~~G---r~~iiLgivNi~lGl~l~~~~~-~--~w~i---~y~~~v~~~~ 105 (150)
++...+++.++-+|.|+++ ++|+.|++.=..-| -.+.-++.-|...|+...-+.+ . .|.. .|.+..++..
T Consensus 96 L~~Li~R~v~fefR~k~~~~~~k~~wd~~~~igs~~~~~~~Gvalg~~~~G~pi~~~~~~~g~~~~~l~~pf~~l~gl~~ 175 (346)
T COG1294 96 LFGLIFRGVAFEFRSKIEDPRWKKFWDWAFFIGSFLPPLLLGVALGNLLQGVPIELNGGYAGLSFDQLLNPFALLCGLGL 175 (346)
T ss_pred HHHHHHhhhhhhhcccccChhhHhHHHHHHHhhhHHHHHHHHHHHHHHhcCceeccCCCcccccHHHHhCcHHHHHHHHH
Confidence 3344666777777876665 67799998765555 3344456668899998883221 1 2332 3455555544
Q ss_pred HHHHHHHHHHhhhh
Q 041715 106 GVCIALEVNSWVIF 119 (150)
Q Consensus 106 ~~~i~lEi~~~~~~ 119 (150)
+.-..+.-..|...
T Consensus 176 ~~~~~l~Ga~~l~~ 189 (346)
T COG1294 176 VLMYVLHGAAWLLL 189 (346)
T ss_pred HHHHHHHHHHHHHH
Confidence 44444444556555
No 44
>PF13703 PepSY_TM_2: PepSY-associated TM helix
Probab=62.43 E-value=5.4 Score=27.36 Aligned_cols=31 Identities=19% Similarity=0.367 Sum_probs=25.1
Q ss_pred CCcceeeeeeeehHHHHHHHHHHHHHhhhccc
Q 041715 54 NKFRKYWKSYHHFVGYACVVLGVVNVFQGFEV 85 (150)
Q Consensus 54 ~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~l 85 (150)
.+.|. |...|...|..+.++-++=.+.|+-+
T Consensus 55 ~~~r~-~~dlH~~~G~~~~~~ll~~a~TG~~~ 85 (88)
T PF13703_consen 55 KSKRR-WFDLHRVLGLWFLPFLLVIALTGLFF 85 (88)
T ss_pred CccCh-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566 77799999999999988888888754
No 45
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=61.36 E-value=20 Score=26.50 Aligned_cols=53 Identities=19% Similarity=0.173 Sum_probs=33.9
Q ss_pred cceeeeeeeehHHHHHHHHHHHHHhhhcccccccccCceehhhHHHHHHHHHHHHHHHHH
Q 041715 56 FRKYWKSYHHFVGYACVVLGVVNVFQGFEVMGEGRSYAKLAYCLCLSTLIGVCIALEVNS 115 (150)
Q Consensus 56 ~R~~w~~~H~~~Gr~~iiLgivNi~lGl~l~~~~~~~w~i~y~~~v~~~~~~~i~lEi~~ 115 (150)
.|+++.-+..+.||.+..+=+..+.++. ....+.-+......+++++.+....
T Consensus 57 i~~~~~FL~~~~GRGlfyif~G~l~~~~-------~~~~~i~g~~~~~~G~~~i~l~~~~ 109 (136)
T PF08507_consen 57 IRKYFGFLYSYIGRGLFYIFLGTLCLGQ-------SILSIIIGLLLFLVGVIYIILGFFC 109 (136)
T ss_pred HHHhHhHHHhHHHHHHHHHHHHHHHHhh-------HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 7889999999999987654333333332 1233555666667777787776544
No 46
>PF06697 DUF1191: Protein of unknown function (DUF1191); InterPro: IPR010605 This family contains hypothetical plant proteins of unknown function.
Probab=57.44 E-value=9.9 Score=32.26 Aligned_cols=42 Identities=21% Similarity=0.203 Sum_probs=21.0
Q ss_pred CceehhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc
Q 041715 92 YAKLAYCLCLSTLIGVCIALEVNSWVIFCRKSKEEKLRREGL 133 (150)
Q Consensus 92 ~w~i~y~~~v~~~~~~~i~lEi~~~~~~~r~~~~~~~~~~~~ 133 (150)
.|+|+-++..++.++..+.+-+....+.+||+|-|+|.++.-
T Consensus 212 ~W~iv~g~~~G~~~L~ll~~lv~~~vr~krk~k~~eMEr~A~ 253 (278)
T PF06697_consen 212 WWKIVVGVVGGVVLLGLLSLLVAMLVRYKRKKKIEEMERRAE 253 (278)
T ss_pred eEEEEEEehHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhc
Confidence 355554444444444443333334444455666666766653
No 47
>PF13706 PepSY_TM_3: PepSY-associated TM helix
Probab=56.38 E-value=5.8 Score=23.27 Aligned_cols=27 Identities=22% Similarity=0.375 Sum_probs=16.6
Q ss_pred ceeeeeeeehHHHHHHHHHHHHHhhhc
Q 041715 57 RKYWKSYHHFVGYACVVLGVVNVFQGF 83 (150)
Q Consensus 57 R~~w~~~H~~~Gr~~iiLgivNi~lGl 83 (150)
|+.+-..|.|.|-++-++-++-.+.|.
T Consensus 1 rr~~~~~H~W~Gl~~g~~l~~~~~tG~ 27 (37)
T PF13706_consen 1 RRILRKLHRWLGLILGLLLFVIFLTGA 27 (37)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 345556677777666666655555554
No 48
>COG2717 Predicted membrane protein [Function unknown]
Probab=54.64 E-value=16 Score=29.72 Aligned_cols=40 Identities=20% Similarity=0.488 Sum_probs=28.0
Q ss_pred eeeeeeeehHHHHHHHHHHHHHhhhcccccccccCceehhhHHHH
Q 041715 58 KYWKSYHHFVGYACVVLGVVNVFQGFEVMGEGRSYAKLAYCLCLS 102 (150)
Q Consensus 58 ~~w~~~H~~~Gr~~iiLgivNi~lGl~l~~~~~~~w~i~y~~~v~ 102 (150)
+-|+.+|++ +|.+.+||.+-...+-+.. ..+.+.|.++.+
T Consensus 144 ~rW~~LHrL-vYl~~~L~~lH~~~s~K~~----~~~~vlY~ii~~ 183 (209)
T COG2717 144 KRWKKLHRL-VYLALILGALHYLWSVKID----MPEPVLYAIIFA 183 (209)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHhcCcc----chHHHHHHHHHH
Confidence 579999986 6999999999888855333 224466655553
No 49
>PF01794 Ferric_reduct: Ferric reductase like transmembrane component; InterPro: IPR013130 This family includes a common region in the transmembrane proteins mammalian cytochrome b-245 heavy chain (gp91-phox), ferric reductase transmembrane component in yeast and respiratory burst oxidase from Arabidopsis thaliana. This may be a family of flavocytochromes capable of moving electrons across the plasma membrane [] that include a potential FAD binding domain. Mutations in the sequence of cytochrome b-245 heavy chain (gp91-phox) lead to the X-linked chronic granulomatous disease. The bacteriocidal ability of phagocytic cells is reduced and is characterised by the absence of a functional plasma membrane associated NADPH oxidase [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0016021 integral to membrane
Probab=52.00 E-value=12 Score=26.02 Aligned_cols=21 Identities=14% Similarity=0.390 Sum_probs=16.7
Q ss_pred eeeeeehHHHHHHHHHHHHHh
Q 041715 60 WKSYHHFVGYACVVLGVVNVF 80 (150)
Q Consensus 60 w~~~H~~~Gr~~iiLgivNi~ 80 (150)
...+|+|+|+.+++++++=..
T Consensus 33 ~~~~Hr~lg~~~~~~~~~H~~ 53 (125)
T PF01794_consen 33 LLRFHRWLGRLAFFLALLHGV 53 (125)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344899999999999887653
No 50
>KOG1619 consensus Cytochrome b [Energy production and conversion]
Probab=51.77 E-value=34 Score=28.56 Aligned_cols=58 Identities=21% Similarity=0.230 Sum_probs=35.8
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhccCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhcc
Q 041715 25 YGLHRKLGFTAFCLGALQTLALLFRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFE 84 (150)
Q Consensus 25 ~~~H~~iGiiv~~l~~lQ~l~~~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~ 84 (150)
.-.|..+=++.++++.+-..+.+.-++..+ -.=+.-+|-|.|-+++++=..+-..|+-
T Consensus 89 KliH~~LH~~Alvl~i~gl~avf~~hn~~~--i~NfySLHSWlGl~~v~ly~~Q~v~GF~ 146 (245)
T KOG1619|consen 89 KLIHLGLHIIALVLAIIGLCAVFDSHNLVG--IANFYSLHSWLGLCVVILYSLQWVFGFF 146 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--ccceeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 356777777666666655554443333333 1234567999999888887766655553
No 51
>PF02322 Cyto_ox_2: Cytochrome oxidase subunit II; InterPro: IPR003317 These proteins are cytochrome bd type terminal oxidases that catalyse quinol dependent, Na+ independent oxygen uptake []. Members of this family are integral membrane proteins and contain a protoheame IX centre B558. Cytochrome bd may play an important role in microaerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae, where it is expressed under all conditions that permit diazotrophy []. ; GO: 0055114 oxidation-reduction process, 0016020 membrane
Probab=51.15 E-value=50 Score=28.22 Aligned_cols=47 Identities=23% Similarity=0.485 Sum_probs=31.8
Q ss_pred HHHHHHhhhccCCC-CCcceeeeeeeehHHHH-HHHHH--HHHHhhhcccc
Q 041715 40 ALQTLALLFRPKTT-NKFRKYWKSYHHFVGYA-CVVLG--VVNVFQGFEVM 86 (150)
Q Consensus 40 ~lQ~l~~~~Rp~k~-~k~R~~w~~~H~~~Gr~-~iiLg--ivNi~lGl~l~ 86 (150)
.+...++-+|.+.+ .++|+.|++.--.-+-. ...+| +.|+..|+.+.
T Consensus 93 i~RgvafefR~~~~~~~~r~~wd~~~~~gSll~~~~~G~~~g~~~~G~p~~ 143 (328)
T PF02322_consen 93 ILRGVAFEFRHKADSPRWRRFWDWVFFIGSLLPPFLLGVALGNLVSGLPID 143 (328)
T ss_pred HHHHHHHHHHhccCChhhHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCccc
Confidence 44666777888764 57899999877655533 23344 44888898777
No 52
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=49.46 E-value=24 Score=26.58 Aligned_cols=23 Identities=4% Similarity=-0.061 Sum_probs=14.4
Q ss_pred ccccCceehhhHHHHHHHHHHHHH
Q 041715 88 EGRSYAKLAYCLCLSTLIGVCIAL 111 (150)
Q Consensus 88 ~~~~~w~i~y~~~v~~~~~~~i~l 111 (150)
++. .|.++..+..++.+++.+++
T Consensus 31 D~t-pWNysiL~Ls~vvlvi~~~L 53 (125)
T PF15048_consen 31 DAT-PWNYSILALSFVVLVISFFL 53 (125)
T ss_pred CCC-CcchHHHHHHHHHHHHHHHH
Confidence 444 48877766666666655555
No 53
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=48.86 E-value=73 Score=29.77 Aligned_cols=50 Identities=16% Similarity=0.092 Sum_probs=35.1
Q ss_pred eehHHHHHHHHHHHHHhhhcccccccccCce----ehhhHHHHHHHHHHHHHHH
Q 041715 64 HHFVGYACVVLGVVNVFQGFEVMGEGRSYAK----LAYCLCLSTLIGVCIALEV 113 (150)
Q Consensus 64 H~~~Gr~~iiLgivNi~lGl~l~~~~~~~w~----i~y~~~v~~~~~~~i~lEi 113 (150)
=-|+|-.+.+.|++-..+|++..+.++..|+ ++..++-.+..+++.+-|.
T Consensus 239 lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~ 292 (599)
T PF06609_consen 239 LDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEW 292 (599)
T ss_pred hhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhh
Confidence 3689999999999999999999977643576 3444443344444455554
No 54
>PF14358 DUF4405: Domain of unknown function (DUF4405)
Probab=45.40 E-value=34 Score=21.86 Aligned_cols=26 Identities=19% Similarity=0.682 Sum_probs=21.4
Q ss_pred CCcceeeeeeeehHHHHHHHHHHHHH
Q 041715 54 NKFRKYWKSYHHFVGYACVVLGVVNV 79 (150)
Q Consensus 54 ~k~R~~w~~~H~~~Gr~~iiLgivNi 79 (150)
+..|..|...|.+.|...+++..+=+
T Consensus 35 ~~~~~~~~~iH~~~g~~~~~l~~~Hl 60 (64)
T PF14358_consen 35 GLNKHFWRNIHLWAGYLFLILIILHL 60 (64)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45578999999999999999986544
No 55
>PF11862 DUF3382: Domain of unknown function (DUF3382); InterPro: IPR021807 This entry represents the N-terminal domain of the LivHM type high-affinity branched-chain amino acid transport system permease proteins. The domain is about 100 amino acids in length, and is found associated with PF02653 from PFAM.
Probab=45.36 E-value=58 Score=23.03 Aligned_cols=72 Identities=15% Similarity=0.063 Sum_probs=36.1
Q ss_pred ehhhhhhhhheeccCCCCcccccc-----hhHHHHHHHHHHHHHHH-hhhccCCCCC--cce----eeeeeeehHHHHHH
Q 041715 5 LGTVGFGIGIRLGDLSPGVVYGLH-----RKLGFTAFCLGALQTLA-LLFRPKTTNK--FRK----YWKSYHHFVGYACV 72 (150)
Q Consensus 5 l~~aGf~lGi~l~~~s~~~~~~~H-----~~iGiiv~~l~~lQ~l~-~~~Rp~k~~k--~R~----~w~~~H~~~Gr~~i 72 (150)
+.+++..+|+++.++......+.+ ..++++...-.++|.+- .+-|+.++.+ ... -....++|+.-.++
T Consensus 16 lvl~~pi~Gl~l~~~g~~L~~~~r~~~~~~~V~~~~~~~Fl~qL~r~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ll 95 (101)
T PF11862_consen 16 LVLFGPIVGLKLDNQGGQLVLEPRWGLLAWWVAVAAAGRFLFQLFRPWLARRFKKAPSGVPVLPPDGLPSLQRWIIPLLL 95 (101)
T ss_pred HHHHHHheEEEEecCCcEEEEEecchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCcCCCccccchHHHHHHHHH
Confidence 467788999999865443322222 13444444444566552 1112322222 111 22345666666666
Q ss_pred HHHH
Q 041715 73 VLGV 76 (150)
Q Consensus 73 iLgi 76 (150)
++++
T Consensus 96 v~Al 99 (101)
T PF11862_consen 96 VVAL 99 (101)
T ss_pred HHHH
Confidence 6654
No 56
>KOG1608 consensus Protein transporter of the TRAM (translocating chain-associating membrane) superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=45.26 E-value=1.2e+02 Score=26.41 Aligned_cols=58 Identities=19% Similarity=0.316 Sum_probs=38.4
Q ss_pred hhHHHHHHHHH-HHHHHH----hh-hccCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhcccc
Q 041715 29 RKLGFTAFCLG-ALQTLA----LL-FRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFEVM 86 (150)
Q Consensus 29 ~~iGiiv~~l~-~lQ~l~----~~-~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~l~ 86 (150)
..+|+++++|- +.|.+- ++ +--.|-.|.++.||..-...--..+++++.+++.|+.-+
T Consensus 216 ~rlgLvLl~LhYftellfHi~rlfyf~dek~~k~fslwa~vF~l~Rl~tliiaVlt~gfgla~~ 279 (374)
T KOG1608|consen 216 NRLGLVLLTLHYFTELLFHIARLFYFSDEKYQKLFSLWAAVFVLGRLGTLIIAVLTVGFGLAGA 279 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 34677666665 344431 11 123345678899998766666678899999999998766
No 57
>PF14007 YtpI: YtpI-like protein
Probab=45.03 E-value=38 Score=23.96 Aligned_cols=47 Identities=26% Similarity=0.412 Sum_probs=34.5
Q ss_pred cchhHHHHHHHHHHHHHHHhhhccCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhcccc
Q 041715 27 LHRKLGFTAFCLGALQTLALLFRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFEVM 86 (150)
Q Consensus 27 ~H~~iGiiv~~l~~lQ~l~~~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~l~ 86 (150)
.-..+|+.++.++.-|.+. . + +++=..+|-+.+++|+.|++.|++-.
T Consensus 35 a~ialG~fl~~fgiNQ~~~-~-----~-------st~~~iV~~ifl~lG~~n~~~G~r~y 81 (89)
T PF14007_consen 35 ANIALGIFLILFGINQMFL-F-----G-------STVRLIVGAIFLVLGLFNLFAGIRAY 81 (89)
T ss_pred HHHHHHHHHHHHHHHHHHH-c-----c-------cHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3456888888888888765 1 1 22335689999999999999998765
No 58
>PF10348 DUF2427: Domain of unknown function (DUF2427); InterPro: IPR018825 This entry represents the N-terminal region of a family of proteins conserved in fungi. Several of these proteins are annotated as being Ftp1 but this could not be confirmed. Their function is not known.
Probab=44.76 E-value=48 Score=23.79 Aligned_cols=24 Identities=17% Similarity=0.063 Sum_probs=12.8
Q ss_pred cchhHHHHHHHHHHHHHHHhhhccCC
Q 041715 27 LHRKLGFTAFCLGALQTLALLFRPKT 52 (150)
Q Consensus 27 ~H~~iGiiv~~l~~lQ~l~~~~Rp~k 52 (150)
.|..+-.+ +..++=|++.++++-+
T Consensus 20 ~Hi~lm~l--a~~il~Pi~lvL~~~~ 43 (105)
T PF10348_consen 20 AHIVLMTL--AWVILYPIGLVLGNAR 43 (105)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHcc
Confidence 45444333 3334457777776654
No 59
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=43.62 E-value=29 Score=22.90 Aligned_cols=27 Identities=22% Similarity=0.346 Sum_probs=22.0
Q ss_pred chhHHHHHHHHHHHHHHHhhhccCCCC
Q 041715 28 HRKLGFTAFCLGALQTLALLFRPKTTN 54 (150)
Q Consensus 28 H~~iGiiv~~l~~lQ~l~~~~Rp~k~~ 54 (150)
=..+|++++++.++=++...+||.+++
T Consensus 10 a~a~~t~~~~l~fiavi~~ayr~~~K~ 36 (60)
T COG4736 10 ADAWGTIAFTLFFIAVIYFAYRPGKKG 36 (60)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccchh
Confidence 346788888888888888889998876
No 60
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=42.19 E-value=40 Score=25.51 Aligned_cols=29 Identities=21% Similarity=0.406 Sum_probs=19.1
Q ss_pred ceeeeeee--ehHHHHHHHHHHHHHhhhccc
Q 041715 57 RKYWKSYH--HFVGYACVVLGVVNVFQGFEV 85 (150)
Q Consensus 57 R~~w~~~H--~~~Gr~~iiLgivNi~lGl~l 85 (150)
|.=|++|| ..+|-+.++.|++--.+-...
T Consensus 43 g~e~s~Yrci~pfG~vili~GvvvT~vays~ 73 (129)
T PF15099_consen 43 GAEWSCYRCIMPFGVVILIAGVVVTAVAYSF 73 (129)
T ss_pred CCCceEEEEEEEehHHHHHHhhHhheeeEee
Confidence 45567777 567888888887755554444
No 61
>PHA00726 hypothetical protein
Probab=41.46 E-value=32 Score=24.34 Aligned_cols=37 Identities=30% Similarity=0.486 Sum_probs=22.4
Q ss_pred HHhhhccCCCCCcceeeeeeeehHHHHHHHHHHHHHhhh
Q 041715 44 LALLFRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQG 82 (150)
Q Consensus 44 l~~~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lG 82 (150)
.++++|-.|..+.++--| |+.+|+=+++-++.+...|
T Consensus 22 ~sLLFRKpK~k~~~~~~~--~r~iGyYlVissv~aL~vs 58 (89)
T PHA00726 22 TALLFRKPKPKKVKSTLN--HRSIGYYLVISSVLALIVS 58 (89)
T ss_pred HHHHhcCCCCchhhcCCC--CcceeeeeHHHHHHHHHHH
Confidence 466676433333344434 6777877777777766655
No 62
>PLN02351 cytochromes b561 family protein
Probab=40.29 E-value=85 Score=26.18 Aligned_cols=53 Identities=25% Similarity=0.189 Sum_probs=30.2
Q ss_pred cccchhHHHHHHHHHHHHHHH-hhhccCCCCCcceeeeeeeehHHHHHHHHHHHHHhh
Q 041715 25 YGLHRKLGFTAFCLGALQTLA-LLFRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQ 81 (150)
Q Consensus 25 ~~~H~~iGiiv~~l~~lQ~l~-~~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~l 81 (150)
++.||.+=. +.+.++|.-+ +..|.-|.+ |+.|..+|+.+--.+++++++-+..
T Consensus 51 fn~HP~lMv--iGfi~L~geAILvYR~~~~~--~k~~K~lH~~Lh~~Ali~~vvGl~a 104 (242)
T PLN02351 51 AVLHPLLMV--IGFILISGEAILVHRWLPGS--RKTKKSVHLWLQGLALASGVFGIWT 104 (242)
T ss_pred ecccHHHHH--HHHHHHHHHHHHHhhccccc--chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 368987533 3344555543 334554433 3336667777777777776666555
No 63
>PLN02810 carbon-monoxide oxygenase
Probab=39.63 E-value=1.9e+02 Score=23.94 Aligned_cols=59 Identities=14% Similarity=0.262 Sum_probs=32.4
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhhccCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhccc
Q 041715 24 VYGLHRKLGFTAFCLGALQTLALLFRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFEV 85 (150)
Q Consensus 24 ~~~~H~~iGiiv~~l~~lQ~l~~~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~l 85 (150)
.+|.||.+=.+-+++..-|.+... |-.+.. |+....+|+.+--.+++++++.+..-++-
T Consensus 46 ~FN~HPvlMv~Gfi~l~geAIL~Y-r~~~~~--k~~~K~iH~~lh~~Al~l~vvGl~Avf~~ 104 (231)
T PLN02810 46 IFNLHPVLMLIGLIIIGGEAIMSY-KSLPLK--KEVKKLIHLVLHAIALILGIFGICAAFKN 104 (231)
T ss_pred eeeehHHHHHHHHHHHhhHHHHHh-hccccc--cchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 468999875544444444443222 322221 23345667777777777777666655543
No 64
>COG3038 CybB Cytochrome B561 [Energy production and conversion]
Probab=39.60 E-value=27 Score=27.74 Aligned_cols=46 Identities=30% Similarity=0.458 Sum_probs=31.0
Q ss_pred hhhhhhhhheeccCCCCc-----ccccchhHHHHHHHHHHHHHHHhhhccC
Q 041715 6 GTVGFGIGIRLGDLSPGV-----VYGLHRKLGFTAFCLGALQTLALLFRPK 51 (150)
Q Consensus 6 ~~aGf~lGi~l~~~s~~~-----~~~~H~~iGiiv~~l~~lQ~l~~~~Rp~ 51 (150)
.+.-+++|..+....++. ..+.|..+|+.++.|+++-.+.-+.-|.
T Consensus 23 v~~~~~~g~~~~~~~~~~~~~~~~~~~Hks~Gi~vl~L~v~Rl~wrl~~~~ 73 (181)
T COG3038 23 VIGAFALGELMGFLPRGPGLYFLLYELHKSIGILVLALMVLRLLWRLRNPA 73 (181)
T ss_pred HHHHHHHHHHHHHcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 344466777665443322 2389999999999999988876554333
No 65
>PF03929 PepSY_TM: PepSY-associated TM helix; InterPro: IPR005625 This domain represents a conserved transmembrane (TM) helix that is found in bacterial proteins. Coil residues are significantly more conserved than other residues and are frequently found within channels and transporters, where they introduce the flexibility and polarity required for transport across the membrane []. This TM helix associates with PepSY (peptidase (M4) and YpeB of subtilis). PepSY is a repeated region first identified in Thermoanaerobacter tengcongensis. The PepSY domain functions in the control of M4 peptidases through their propeptide and in the germination of spores. It may also play a part in regulating protease activity [].
Probab=37.16 E-value=25 Score=19.41 Aligned_cols=23 Identities=17% Similarity=0.378 Sum_probs=12.2
Q ss_pred eeeeehHHHHHHHHHHHHHhhhc
Q 041715 61 KSYHHFVGYACVVLGVVNVFQGF 83 (150)
Q Consensus 61 ~~~H~~~Gr~~iiLgivNi~lGl 83 (150)
+.+|.|++-...++-++-...|+
T Consensus 2 ~~LH~w~~~i~al~~lv~~iTGl 24 (27)
T PF03929_consen 2 NDLHKWFGDIFALFMLVFAITGL 24 (27)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666555555544444444
No 66
>COG3125 CyoD Heme/copper-type cytochrome/quinol oxidase, subunit 4 [Energy production and conversion]
Probab=34.25 E-value=52 Score=24.29 Aligned_cols=10 Identities=30% Similarity=0.424 Sum_probs=5.6
Q ss_pred HHHHHHHHHH
Q 041715 35 AFCLGALQTL 44 (150)
Q Consensus 35 v~~l~~lQ~l 44 (150)
++.++++|.+
T Consensus 52 i~~lA~iQi~ 61 (111)
T COG3125 52 ILGLAVIQIL 61 (111)
T ss_pred HHHHHHHHHH
Confidence 4555666653
No 67
>PF10856 DUF2678: Protein of unknown function (DUF2678); InterPro: IPR022564 This family of proteins has no known function.
Probab=33.91 E-value=1.5e+02 Score=22.13 Aligned_cols=54 Identities=11% Similarity=0.170 Sum_probs=30.0
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhccCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhccc
Q 041715 26 GLHRKLGFTAFCLGALQTLALLFRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFEV 85 (150)
Q Consensus 26 ~~H~~iGiiv~~l~~lQ~l~~~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~l 85 (150)
-.|..+|.....+.++-.+.++..|.+.- +-.|..++-..+...+.++.|=.+-
T Consensus 29 iinliiG~vT~l~VLvtii~afvf~~~~p------~p~~iffavcI~l~~~s~~lLI~WY 82 (118)
T PF10856_consen 29 IINLIIGAVTSLFVLVTIISAFVFPQDPP------KPLHIFFAVCILLICISAILLIFWY 82 (118)
T ss_pred EEEeehHHHHHHHHHHHHhheEEecCCCC------CceEEehHHHHHHHHHHHHhheeeh
Confidence 35667777666666665555555554322 1235666666666665555554443
No 68
>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region. The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].
Probab=33.54 E-value=6.4 Score=30.67 Aligned_cols=38 Identities=8% Similarity=0.196 Sum_probs=19.3
Q ss_pred ehhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q 041715 95 LAYCLCLSTLIGVCIALEVNSWVIFCRKSKEEKLRREG 132 (150)
Q Consensus 95 i~y~~~v~~~~~~~i~lEi~~~~~~~r~~~~~~~~~~~ 132 (150)
++.++++++.+.+-+++.++.|+.++|+|+++-+.+||
T Consensus 50 IVIGvVVGVGg~ill~il~lvf~~c~r~kktdfidSdG 87 (154)
T PF04478_consen 50 IVIGVVVGVGGPILLGILALVFIFCIRRKKTDFIDSDG 87 (154)
T ss_pred EEEEEEecccHHHHHHHHHhheeEEEecccCccccCCC
Confidence 56666666555444444444444444444444455554
No 69
>PF03729 DUF308: Short repeat of unknown function (DUF308); InterPro: IPR005325 This represents a group of short repeats that occurs in a limited number of membrane proteins. It may divide further in short repeats of around 7-10 residues of the pattern G-#-X(2)-#(2)-X (#=hydrophobic).
Probab=31.48 E-value=40 Score=21.10 Aligned_cols=19 Identities=21% Similarity=0.249 Sum_probs=9.6
Q ss_pred hhHHHHHHHHHHHHHHHhh
Q 041715 29 RKLGFTAFCLGALQTLALL 47 (150)
Q Consensus 29 ~~iGiiv~~l~~lQ~l~~~ 47 (150)
..+|+..+.-+..|...+.
T Consensus 26 ~i~g~~~i~~Gi~~l~~~~ 44 (72)
T PF03729_consen 26 IILGIWLIISGIFQLISAF 44 (72)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4455555555555554433
No 70
>PF06011 TRP: Transient receptor potential (TRP) ion channel; InterPro: IPR010308 This family consists of hypothetical proteins of unknown function found in fungi.
Probab=31.36 E-value=2.2e+02 Score=24.99 Aligned_cols=34 Identities=9% Similarity=0.273 Sum_probs=17.5
Q ss_pred HhhhccCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhcccc
Q 041715 45 ALLFRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFEVM 86 (150)
Q Consensus 45 ~~~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~l~ 86 (150)
...+||..+.. - |+.+....-+- ++|.++.+-..
T Consensus 341 ~~~~~Py~~~~---~-n~~~~~~~~~~----~i~~~l~i~f~ 374 (438)
T PF06011_consen 341 LFILRPYMDKR---T-NVLNIILSVVR----LITLFLLIAFL 374 (438)
T ss_pred HHHhChhcccc---c-cHHHHHHHHHH----HHHHHHHHHHh
Confidence 34469986643 2 65565554444 44444444333
No 71
>PF13789 DUF4181: Domain of unknown function (DUF4181)
Probab=30.91 E-value=1.1e+02 Score=21.84 Aligned_cols=29 Identities=10% Similarity=0.123 Sum_probs=24.2
Q ss_pred eeeeeeeehHHHHHHHHHHHHHhhhcccc
Q 041715 58 KYWKSYHHFVGYACVVLGVVNVFQGFEVM 86 (150)
Q Consensus 58 ~~w~~~H~~~Gr~~iiLgivNi~lGl~l~ 86 (150)
+..|-.|.+.-....+..++.++....+.
T Consensus 25 ~~vn~~h~~~e~~i~i~~ii~~~~~~~~~ 53 (110)
T PF13789_consen 25 KHVNKLHKKGEWIIFIIFIILIFIFLFIF 53 (110)
T ss_pred CchhHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 67789999999999999999996666555
No 72
>PRK15028 cytochrome bd-II oxidase subunit 2; Provisional
Probab=30.42 E-value=1.5e+02 Score=26.21 Aligned_cols=47 Identities=23% Similarity=0.384 Sum_probs=29.8
Q ss_pred HHHHHHhhhccCCCC-CcceeeeeeeehHHHHH-HHH--HHHHHhhhcccc
Q 041715 40 ALQTLALLFRPKTTN-KFRKYWKSYHHFVGYAC-VVL--GVVNVFQGFEVM 86 (150)
Q Consensus 40 ~lQ~l~~~~Rp~k~~-k~R~~w~~~H~~~Gr~~-iiL--givNi~lGl~l~ 86 (150)
++.+.++=+|.+.++ ++|+.|++.-..-+-+. +.+ .+.|...|+.+.
T Consensus 98 IlRgvafEfR~k~~~~~wr~~Wd~~f~vgS~l~~f~~Gv~~g~~v~G~p~~ 148 (378)
T PRK15028 98 FFRPLAFDYRGKIADARWRKMWDAGLVIGSLVPPVVFGIAFGNLLLGVPFA 148 (378)
T ss_pred HHhhhhheecccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCceec
Confidence 334445556766454 56999998776555433 233 456899999883
No 73
>PRK11513 cytochrome b561; Provisional
Probab=29.83 E-value=60 Score=25.11 Aligned_cols=23 Identities=22% Similarity=0.235 Sum_probs=19.4
Q ss_pred ccchhHHHHHHHHHHHHHHHhhh
Q 041715 26 GLHRKLGFTAFCLGALQTLALLF 48 (150)
Q Consensus 26 ~~H~~iGiiv~~l~~lQ~l~~~~ 48 (150)
+.|..+|++++.+.++..+.-+.
T Consensus 43 ~~H~s~G~~vl~L~v~Rl~~r~~ 65 (176)
T PRK11513 43 MIHVSCGISILVLMVVRLLLRLK 65 (176)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Confidence 67999999999999999875443
No 74
>COG4244 Predicted membrane protein [Function unknown]
Probab=29.82 E-value=1.1e+02 Score=23.99 Aligned_cols=58 Identities=12% Similarity=0.064 Sum_probs=30.8
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhccCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhccccccc
Q 041715 26 GLHRKLGFTAFCLGALQTLALLFRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFEVMGEG 89 (150)
Q Consensus 26 ~~H~~iGiiv~~l~~lQ~l~~~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~l~~~~ 89 (150)
-.|-.||+++.++.+ ....+..+..+ +.=-+|.-...|.++..++++..+..+.++ +|
T Consensus 21 lVhFpI~l~v~ali~-D~~~~~~~~~~----~~~vs~wn~~~a~i~~~~A~~~g~~e~lla-~~ 78 (160)
T COG4244 21 LVHFPIGLFVAALIF-DLVGFLTGKDR----WFDVSWWNLFAALIAGFFAVIAGLFEFLLA-RP 78 (160)
T ss_pred ccchHHHHHHHHHHH-HHHHHhhhhHH----HHHhHHHHHHHHHHHHHHHHHHHHHHHHHc-Cc
Confidence 346667777666644 44444432111 111133334566666777777777777666 44
No 75
>PRK15003 cytochrome d ubiquinol oxidase subunit 2; Provisional
Probab=29.56 E-value=1.9e+02 Score=25.52 Aligned_cols=46 Identities=17% Similarity=0.392 Sum_probs=29.2
Q ss_pred HHHHHHhhhccCCCC-CcceeeeeeeehHHHHH-HHH--HHHHHhhhccc
Q 041715 40 ALQTLALLFRPKTTN-KFRKYWKSYHHFVGYAC-VVL--GVVNVFQGFEV 85 (150)
Q Consensus 40 ~lQ~l~~~~Rp~k~~-k~R~~w~~~H~~~Gr~~-iiL--givNi~lGl~l 85 (150)
++...++=+|.+.++ ++|+.|++....-+-.+ +.+ .+.|+..|+.+
T Consensus 98 I~RgvafEfR~k~~~~~wr~~Wd~~f~igSll~~f~~Gv~lg~~v~G~p~ 147 (379)
T PRK15003 98 FFRPVGFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPF 147 (379)
T ss_pred HHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 334455556777444 56899998876655433 333 34588899876
No 76
>PF07331 TctB: Tripartite tricarboxylate transporter TctB family; InterPro: IPR009936 This entry contains bacterial proteins of around 150 residues in length, which have 4 transmembrane domains. Some of the sequences in the entry are annotated as the TctB subunit of the tripartite tricarboxylate transport(TTT) family. However there is no direct evidence to support this annotation as characterised members of this family are not associated with the entry.
Probab=28.65 E-value=2.2e+02 Score=20.32 Aligned_cols=22 Identities=27% Similarity=0.326 Sum_probs=13.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhcc
Q 041715 29 RKLGFTAFCLGALQTLALLFRP 50 (150)
Q Consensus 29 ~~iGiiv~~l~~lQ~l~~~~Rp 50 (150)
..+++...+++.++.+....++
T Consensus 39 ~~l~~~l~~~~~~l~~~~~~~~ 60 (141)
T PF07331_consen 39 RLLGILLLILSLLLLVRSFRGP 60 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC
Confidence 3455666666677776666554
No 77
>TIGR01620 hyp_HI0043 conserved hypothetical protein, TIGR01620. This model includes putative membrane proteins from alpha and gamma proteobacteria, each making up their own clade. The two clades have less than 25% identity between them. We could not find support for the assignment to the sequence from Brucella of being a GTP-binding protein.
Probab=28.29 E-value=39 Score=28.83 Aligned_cols=50 Identities=20% Similarity=0.132 Sum_probs=22.8
Q ss_pred ce-ehhhHHHHHHHHHHHHHHHHHhhhhhhhhh--hhhhhhccccccCCCCCc
Q 041715 93 AK-LAYCLCLSTLIGVCIALEVNSWVIFCRKSK--EEKLRREGLIGGSDKGSG 142 (150)
Q Consensus 93 w~-i~y~~~v~~~~~~~i~lEi~~~~~~~r~~~--~~~~~~~~~~~~~~~~~~ 142 (150)
|. +++.++++..+++.+..-+..|..+.|-++ +.+.+.+......|-|.+
T Consensus 46 wLg~~~~~l~~~~~l~~~~~~~rE~~~l~RL~~~~~~r~~a~~ll~~~~~~~a 98 (289)
T TIGR01620 46 WLGLTATIALIVIIFAGLALVGREWRRLMRLNARQSLKADAETASLDKSPKPG 98 (289)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHhHH
Confidence 65 455555554444444433344544444333 333344444445554443
No 78
>PRK10209 acid-resistance membrane protein; Provisional
Probab=28.02 E-value=1.3e+02 Score=23.38 Aligned_cols=77 Identities=17% Similarity=0.282 Sum_probs=43.5
Q ss_pred cchhHHHHHHHHHHHHHHHhhhccCCCCCcceeeeeeeehHHH-HHHHHHHHHHhhhcccccccccCceehhhHHHHHHH
Q 041715 27 LHRKLGFTAFCLGALQTLALLFRPKTTNKFRKYWKSYHHFVGY-ACVVLGVVNVFQGFEVMGEGRSYAKLAYCLCLSTLI 105 (150)
Q Consensus 27 ~H~~iGiiv~~l~~lQ~l~~~~Rp~k~~k~R~~w~~~H~~~Gr-~~iiLgivNi~lGl~l~~~~~~~w~i~y~~~v~~~~ 105 (150)
.-..+|...++-+..|.+..+ +.+++ .+.++ ...++|+..+..|+-+..+|.. -..+...++++..
T Consensus 49 ~~~~~g~~ll~~Gi~~l~~~~-~~~~~-----------~~~~~~~~ll~Gil~ii~Gil~l~~P~~-~~~~l~~l~g~~~ 115 (190)
T PRK10209 49 LSTVVGILLICSGIALIVGLF-ANRSH-----------NFWPMLSGILLGVAYLVLGYFFIRNPEV-GMFSLAAFIAGLF 115 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-Hcccc-----------chHHHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHH
Confidence 346688888888888877444 22111 11111 2356677777777766644542 2345555666666
Q ss_pred HHHHHHHHHHh
Q 041715 106 GVCIALEVNSW 116 (150)
Q Consensus 106 ~~~i~lEi~~~ 116 (150)
++.-+.|+...
T Consensus 116 iv~Gi~~i~~a 126 (190)
T PRK10209 116 CVGGIIRLMSG 126 (190)
T ss_pred HHHHHHHHHHH
Confidence 66666665443
No 79
>PF02628 COX15-CtaA: Cytochrome oxidase assembly protein; InterPro: IPR003780 This entry represents 2 activities required for heme biosynthesis: Protoheme IX farnesyltransferase converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. Heme A synthase catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group. The entry contains CtaA, which is required for cytochrome aa3 biosynthesis and sporulation in Bacillus subtilis [] and in Saccharomyces cerevisiae (Baker's yeast) the COX15 protein is required for cytochrome c oxidase assembly.; GO: 0016627 oxidoreductase activity, acting on the CH-CH group of donors, 0006461 protein complex assembly, 0055114 oxidation-reduction process, 0016020 membrane
Probab=27.91 E-value=78 Score=26.24 Aligned_cols=53 Identities=15% Similarity=0.052 Sum_probs=32.7
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhccCCCCCcceeeeeeeehHHHHHHHHHHHHHhhhcccc
Q 041715 26 GLHRKLGFTAFCLGALQTLALLFRPKTTNKFRKYWKSYHHFVGYACVVLGVVNVFQGFEVM 86 (150)
Q Consensus 26 ~~H~~iGiiv~~l~~lQ~l~~~~Rp~k~~k~R~~w~~~H~~~Gr~~iiLgivNi~lGl~l~ 86 (150)
-.||.+|.++-.+...-.+.+..+.+++ |.. .+....+.++.+.++.+|-...
T Consensus 69 ~~HR~~~~~~gl~~l~~~~~~~~~~~~~---~~~-----~~~~~~~~~l~~~Q~~lG~~~V 121 (302)
T PF02628_consen 69 WGHRLLAGLVGLLILALAVWAWRKRRIR---RRL-----RWLALLALVLVILQGLLGAWTV 121 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccC---cch-----HHHHHHHHHHHHHHHHHHHHHH
Confidence 5789888877766655544444322221 111 2456677778888888887766
No 80
>PF01292 Ni_hydr_CYTB: Prokaryotic cytochrome b561; InterPro: IPR011577 Cytochrome b561 is an integral membrane and electron transport protein, that binds two haem groups non-covalently. This domain is also found in a number of nickel-dependent hydrogenase subunits which are also B-type cytochromes that interact with quinones and anchor the hydrogenase to the membrane. Members of the 'eukaryotic cytochrome b561' family can be found in IPR004877 from INTERPRO.; GO: 0009055 electron carrier activity, 0016021 integral to membrane
Probab=27.56 E-value=1.2e+02 Score=22.54 Aligned_cols=22 Identities=23% Similarity=0.175 Sum_probs=16.8
Q ss_pred cccchhHHHHHHHHHHHHHHHh
Q 041715 25 YGLHRKLGFTAFCLGALQTLAL 46 (150)
Q Consensus 25 ~~~H~~iGiiv~~l~~lQ~l~~ 46 (150)
.+.|..+|.+++++..+=.+..
T Consensus 43 ~~~H~~~G~~~~~~~~~~l~~~ 64 (182)
T PF01292_consen 43 RNWHVIAGLLLFALLIFRLLWR 64 (182)
T ss_pred HhHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999998876555433
No 81
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=27.10 E-value=1.2e+02 Score=18.45 Aligned_cols=12 Identities=8% Similarity=0.022 Sum_probs=4.6
Q ss_pred HHHHHHHHHHHH
Q 041715 99 LCLSTLIGVCIA 110 (150)
Q Consensus 99 ~~v~~~~~~~i~ 110 (150)
....+++++.+.
T Consensus 13 ~~~v~~~~~F~g 24 (49)
T PF05545_consen 13 IGTVLFFVFFIG 24 (49)
T ss_pred HHHHHHHHHHHH
Confidence 333333343333
No 82
>PF12811 BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539 Bax inhibitor-1 (BI1) family contains six known genes in human. Some members of BI1 family have been proved to play important roles in cell death [, ].
Probab=27.00 E-value=1.2e+02 Score=25.65 Aligned_cols=55 Identities=13% Similarity=0.084 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHHHHhhhccccc----ccccCceehhhHHHHHHHHHHHHHHHHHhhhhh
Q 041715 66 FVGYACVVLGVVNVFQGFEVMG----EGRSYAKLAYCLCLSTLIGVCIALEVNSWVIFC 120 (150)
Q Consensus 66 ~~Gr~~iiLgivNi~lGl~l~~----~~~~~w~i~y~~~v~~~~~~~i~lEi~~~~~~~ 120 (150)
.++-.+++++..|..+=+|... ..-|+..-+|..+--...++++++|+.+.....
T Consensus 213 ~~slv~v~iAa~sLllDFd~Ie~~v~~gaPk~~eW~~AfGL~vTLVWLYlEILRLL~~l 271 (274)
T PF12811_consen 213 GFSLVVVGIAALSLLLDFDFIEQGVRQGAPKKMEWYAAFGLLVTLVWLYLEILRLLSKL 271 (274)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444445554444441 000223344555566667788888887765443
No 83
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.33 E-value=61 Score=23.45 Aligned_cols=71 Identities=20% Similarity=0.271 Sum_probs=37.2
Q ss_pred ehHHHHHHHHHHHHHhhhcccccccccCceehhhHHHHHHHHHHHHHHHHHhhhhhhh-hhhhhhhhccccccCCCCC
Q 041715 65 HFVGYACVVLGVVNVFQGFEVMGEGRSYAKLAYCLCLSTLIGVCIALEVNSWVIFCRK-SKEEKLRREGLIGGSDKGS 141 (150)
Q Consensus 65 ~~~Gr~~iiLgivNi~lGl~l~~~~~~~w~i~y~~~v~~~~~~~i~lEi~~~~~~~r~-~~~~~~~~~~~~~~~~~~~ 141 (150)
++.=-++.+-|++....|+... +-+ | ..|++-+++....-+.+ =.|=.++|+ .+..+...+..-.|+|||-
T Consensus 26 r~~q~ilti~aiVg~i~Gf~~Q-qls--~-tvy~vg~~~v~t~li~L--PpwP~y~rn~LkW~~Pa~esssdd~d~g~ 97 (101)
T KOG4112|consen 26 RFQQLILTIGAIVGFIYGFAQQ-QLS--V-TVYIVGAGFVFTLLITL--PPWPWYRRNPLKWAQPAIESSSDDKDKGT 97 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHH--H-HHHHHHHHHHHHHHhcC--CCchhhhcCcccccCCccccccccCCccc
Confidence 3445577788888888888554 221 2 33433333333322222 223323222 3344456677778888874
No 84
>PRK05415 hypothetical protein; Provisional
Probab=26.17 E-value=1.2e+02 Score=26.57 Aligned_cols=59 Identities=14% Similarity=0.108 Sum_probs=26.3
Q ss_pred ehHHHHHHHHHHHHHhhhccccc---ccccCce-ehhhHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 041715 65 HFVGYACVVLGVVNVFQGFEVMG---EGRSYAK-LAYCLCLSTLIGVCIALEVNSWVIFCRKSK 124 (150)
Q Consensus 65 ~~~Gr~~iiLgivNi~lGl~l~~---~~~~~w~-i~y~~~v~~~~~~~i~lEi~~~~~~~r~~~ 124 (150)
+|+.-.+..+....+....+... ... .|. +++.++.+..+++.+..-+..|..+.|-++
T Consensus 68 ~~~~~~l~~l~~~~~~~~~~~i~~~~~~~-~wlg~~~~~~~~~~~~~~~~~~~rE~~~l~rL~~ 130 (341)
T PRK05415 68 KLLWGGLGLLGSLVVGQAVQWLRDAFQRS-DWLGLGAAVVGALIVLAGLGIVVREWRRLRRLRQ 130 (341)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444433331 222 365 455555555555444443344544434333
No 85
>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []. This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.
Probab=25.82 E-value=1.3e+02 Score=18.14 Aligned_cols=10 Identities=20% Similarity=0.408 Sum_probs=3.9
Q ss_pred Hhhhhhhhhh
Q 041715 115 SWVIFCRKSK 124 (150)
Q Consensus 115 ~~~~~~r~~~ 124 (150)
.++-.|+||.
T Consensus 24 ~~YaCcykk~ 33 (38)
T PF02439_consen 24 FYYACCYKKH 33 (38)
T ss_pred HHHHHHHccc
Confidence 3333344433
No 86
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=25.25 E-value=1.9e+02 Score=18.46 Aligned_cols=22 Identities=27% Similarity=0.143 Sum_probs=11.4
Q ss_pred HHHHHHHHhhhcccccccccCc
Q 041715 72 VVLGVVNVFQGFEVMGEGRSYA 93 (150)
Q Consensus 72 iiLgivNi~lGl~l~~~~~~~w 93 (150)
.++|.+-+..|+-+.--|+++|
T Consensus 5 ~v~G~~lv~~Gii~~~lPGpG~ 26 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPLPGPGL 26 (53)
T ss_pred hhHHHHHHHHHHHhhcCCCCcH
Confidence 3455555555555543565544
No 87
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=24.98 E-value=5e+02 Score=23.18 Aligned_cols=17 Identities=18% Similarity=0.366 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHhhhc
Q 041715 67 VGYACVVLGVVNVFQGF 83 (150)
Q Consensus 67 ~Gr~~iiLgivNi~lGl 83 (150)
.+-..++..+..++.++
T Consensus 408 ~~~~~~~~~~~~~v~~~ 424 (507)
T TIGR00910 408 IAGIGFLLSIFAFFISF 424 (507)
T ss_pred HHHHHHHHHHHHHheee
Confidence 33444444444444444
No 88
>PRK14759 potassium-transporting ATPase subunit F; Provisional
Probab=24.63 E-value=1.3e+02 Score=17.11 Aligned_cols=23 Identities=17% Similarity=0.005 Sum_probs=14.0
Q ss_pred hHHHHHHHHHHHHHHHhhhccCC
Q 041715 30 KLGFTAFCLGALQTLALLFRPKT 52 (150)
Q Consensus 30 ~iGiiv~~l~~lQ~l~~~~Rp~k 52 (150)
.+|.++.+..+.=.+.+++||.|
T Consensus 6 ~l~~~va~~L~vYL~~ALlrPEr 28 (29)
T PRK14759 6 SLAGAVSLGLLIYLTYALLRPER 28 (29)
T ss_pred HHHHHHHHHHHHHHHHHHhCccc
Confidence 45555555445455667789875
No 89
>TIGR02115 potass_kdpF K+-transporting ATPase, KdpF subunit. This model describes a very small integral membrane peptide KdpF, a subunit of the K(+)-translocating Kdp complex. It is found upstream of the KdpA subunit (TIGR00680). Because of its very small size and highly hydrophobic character, it is sometimes missed in genome annotation.
Probab=23.52 E-value=98 Score=17.07 Aligned_cols=22 Identities=14% Similarity=0.055 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHhhhccCC
Q 041715 31 LGFTAFCLGALQTLALLFRPKT 52 (150)
Q Consensus 31 iGiiv~~l~~lQ~l~~~~Rp~k 52 (150)
+|.++.+..+.=.+-+++||.|
T Consensus 2 i~~~l~~~L~~YL~~aLl~PEr 23 (26)
T TIGR02115 2 ILLVLAVGLFIYLFYALLRPER 23 (26)
T ss_pred HHHHHHHHHHHHHHHHHhCHHh
Confidence 4555544444445566778875
No 90
>PF14387 DUF4418: Domain of unknown function (DUF4418)
Probab=22.85 E-value=2.8e+02 Score=20.57 Aligned_cols=47 Identities=17% Similarity=0.154 Sum_probs=29.0
Q ss_pred eeehHHHHHHHHHHHHHhhhcccccccccCceehhhHHHHHHHHHHH
Q 041715 63 YHHFVGYACVVLGVVNVFQGFEVMGEGRSYAKLAYCLCLSTLIGVCI 109 (150)
Q Consensus 63 ~H~~~Gr~~iiLgivNi~lGl~l~~~~~~~w~i~y~~~v~~~~~~~i 109 (150)
-.||.|++...+|++-..+|+-..=.+++..+...........+..+
T Consensus 33 ~Ch~tg~a~~~ig~vi~~~~li~~~~k~~~~~~gl~i~~i~~gil~~ 79 (124)
T PF14387_consen 33 KCHWTGQAVTGIGAVIAVLSLIMLFVKNKKARIGLSIANIALGILVI 79 (124)
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 35789999999999988888866623233344444444433333333
No 91
>PF10856 DUF2678: Protein of unknown function (DUF2678); InterPro: IPR022564 This family of proteins has no known function.
Probab=22.49 E-value=2.4e+02 Score=21.06 Aligned_cols=54 Identities=13% Similarity=0.268 Sum_probs=36.2
Q ss_pred eeeehHHHHHHHHHHHHHhhhcccccccccCceehhhHHHHHHHHHHHHHHHHHhh
Q 041715 62 SYHHFVGYACVVLGVVNVFQGFEVMGEGRSYAKLAYCLCLSTLIGVCIALEVNSWV 117 (150)
Q Consensus 62 ~~H~~~Gr~~iiLgivNi~lGl~l~~~~~~~w~i~y~~~v~~~~~~~i~lEi~~~~ 117 (150)
..|+.+|-++-++-.+++..++--...|+..--+.+.+.+.+..+..++| ..|+
T Consensus 29 iinliiG~vT~l~VLvtii~afvf~~~~p~p~~iffavcI~l~~~s~~lL--I~WY 82 (118)
T PF10856_consen 29 IINLIIGAVTSLFVLVTIISAFVFPQDPPKPLHIFFAVCILLICISAILL--IFWY 82 (118)
T ss_pred EEEeehHHHHHHHHHHHHhheEEecCCCCCceEEehHHHHHHHHHHHHhh--eeeh
Confidence 66899999999999999999998885543222355555555555555444 4454
No 92
>PF02285 COX8: Cytochrome oxidase c subunit VIII; InterPro: IPR003205 Cytochrome c oxidase (1.9.3.1 from EC) is an oligomeric enzymatic complex which is a component of the respiratory chain complex and is involved in the transfer of electrons from cytochrome c to oxygen []. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. In eukaryotes, in addition to the three large subunits, I, II and III, that form the catalytic centre of the enzyme complex, there are a variable number of small polypeptidic subunits.This family is composed of cytochrome c oxidase subunit VIII. ; GO: 0004129 cytochrome-c oxidase activity; PDB: 3AG3_Z 3ABM_M 1OCC_Z 3ASO_Z 3AG2_Z 3ABL_M 3AG4_M 3AG1_M 3ASN_M 1OCZ_M ....
Probab=22.25 E-value=41 Score=20.82 Aligned_cols=25 Identities=12% Similarity=0.185 Sum_probs=20.0
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhcc
Q 041715 26 GLHRKLGFTAFCLGALQTLALLFRP 50 (150)
Q Consensus 26 ~~H~~iGiiv~~l~~lQ~l~~~~Rp 50 (150)
..-..+|+.++++.++-|-+.++-+
T Consensus 12 ~~e~aigltv~f~~~L~PagWVLsh 36 (44)
T PF02285_consen 12 PAEQAIGLTVCFVTFLGPAGWVLSH 36 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 4567899999999999998776533
No 93
>PLN02292 ferric-chelate reductase
Probab=21.70 E-value=36 Score=32.42 Aligned_cols=18 Identities=22% Similarity=0.266 Sum_probs=0.0
Q ss_pred eeeeeehHHHHHHHHHHH
Q 041715 60 WKSYHHFVGYACVVLGVV 77 (150)
Q Consensus 60 w~~~H~~~Gr~~iiLgiv 77 (150)
++.+|+|+||.+++++++
T Consensus 205 f~~yHRWlGrii~ll~~l 222 (702)
T PLN02292 205 SIKYHIWLGHLVMTLFTS 222 (702)
T ss_pred HHHHHHHHHHHHHHHHHH
No 94
>KOG3637 consensus Vitronectin receptor, alpha subunit [Extracellular structures]
Probab=21.63 E-value=79 Score=31.49 Aligned_cols=34 Identities=15% Similarity=0.047 Sum_probs=26.5
Q ss_pred cCceehhhHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 041715 91 SYAKLAYCLCLSTLIGVCIALEVNSWVIFCRKSK 124 (150)
Q Consensus 91 ~~w~i~y~~~v~~~~~~~i~lEi~~~~~~~r~~~ 124 (150)
+.|.|+..++++.+.++-+++-..++.-|+|+++
T Consensus 977 p~wiIi~svl~GLLlL~llv~~LwK~GFFKR~r~ 1010 (1030)
T KOG3637|consen 977 PLWIIILSVLGGLLLLALLVLLLWKCGFFKRNRK 1010 (1030)
T ss_pred ceeeehHHHHHHHHHHHHHHHHHHhcCccccCCC
Confidence 5688888888888888888876677777777664
No 95
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=21.06 E-value=1.3e+02 Score=25.81 Aligned_cols=33 Identities=12% Similarity=0.167 Sum_probs=0.0
Q ss_pred ehhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 041715 95 LAYCLCLSTLIGVCIALEVNSWVIFCRKSKEEKLR 129 (150)
Q Consensus 95 i~y~~~v~~~~~~~i~lEi~~~~~~~r~~~~~~~~ 129 (150)
++-.+++.+|+++|++|-.++...+ ++|-|..|
T Consensus 263 iaIliIVLIMvIIYLILRYRRKKKm--kKKlQYiK 295 (299)
T PF02009_consen 263 IAILIIVLIMVIIYLILRYRRKKKM--KKKLQYIK 295 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHH
No 96
>PF07010 Endomucin: Endomucin; InterPro: IPR010740 This family consists of several mammalian endomucin proteins. Endomucin is an early endothelial-specific antigen that is also expressed on putative hematopoietic progenitor cells.
Probab=20.93 E-value=1.5e+02 Score=24.86 Aligned_cols=30 Identities=7% Similarity=0.167 Sum_probs=19.9
Q ss_pred ehhhHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 041715 95 LAYCLCLSTLIGVCIALEVNSWVIFCRKSK 124 (150)
Q Consensus 95 i~y~~~v~~~~~~~i~lEi~~~~~~~r~~~ 124 (150)
++.-++++++++.-.++-++..+++|+|+.
T Consensus 189 vilpvvIaliVitl~vf~LvgLyr~C~k~d 218 (259)
T PF07010_consen 189 VILPVVIALIVITLSVFTLVGLYRMCWKTD 218 (259)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 455566666666666666677888888765
No 97
>PF06422 PDR_CDR: CDR ABC transporter; InterPro: IPR010929 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). In yeast, the PDR and CDR ABC transporters display extensive sequence homology, and confer resistance to several anti-fungal compounds by actively transporting their substrates out of the cell. These transporters have two homologous halves, each with an N-terminal intracellular hydrophilic region that contains an ATP-binding site, followed by a C-terminal membrane-associated region containing six transmembrane segments []. This entry represents a domain of the PDR/CDR ABC transporter comprising extracellular loop 3, transmembrane segment 6 and a linker region.; GO: 0005524 ATP binding, 0042626 ATPase activity, coupled to transmembrane movement of substances, 0006810 transport, 0016021 integral to membrane
Probab=20.76 E-value=92 Score=22.06 Aligned_cols=26 Identities=8% Similarity=0.055 Sum_probs=18.4
Q ss_pred Cce---ehhhHHHHHHHHHHHHHHHHHhh
Q 041715 92 YAK---LAYCLCLSTLIGVCIALEVNSWV 117 (150)
Q Consensus 92 ~w~---i~y~~~v~~~~~~~i~lEi~~~~ 117 (150)
.|+ |..+.++..+++..+.+|..++.
T Consensus 48 ~WRN~GIli~f~i~f~~~~~~~~e~~~~~ 76 (103)
T PF06422_consen 48 RWRNFGILIAFWIFFIVLTLLATEFIKFE 76 (103)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 465 56666677777778888887764
No 98
>PF07856 Orai-1: Mediator of CRAC channel activity; InterPro: IPR012446 This entry includes Drosophila Orai and human Orai1, Orai2 and Orai3. ORAI-1 GFP reporters are co-expressed with STIM-1 (ER CA(2+) sensors) in the gonad and intestine. The protein has four predicted transmembrane domains with a highly conserved region between TM2 ad TM3. This conserved domain is thought to function in channel regulation. ORAI1-related proteins are required for the production of the calcium channel, CRAC, along with STIM1-related proteins [].
Probab=20.61 E-value=2.8e+02 Score=21.74 Aligned_cols=30 Identities=10% Similarity=0.196 Sum_probs=17.2
Q ss_pred ehhhHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 041715 95 LAYCLCLSTLIGVCIALEVNSWVIFCRKSK 124 (150)
Q Consensus 95 i~y~~~v~~~~~~~i~lEi~~~~~~~r~~~ 124 (150)
++.+++++...+++++.-.+.|....+++.
T Consensus 143 ~~~t~i~~~~~li~~~~~~~~wr~l~~~~~ 172 (175)
T PF07856_consen 143 IAITAILVPVLLIFVVFIQHFWRSLVSHKY 172 (175)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 455555555556666555566776655543
No 99
>PTZ00046 rifin; Provisional
Probab=20.56 E-value=1e+02 Score=27.10 Aligned_cols=8 Identities=0% Similarity=0.227 Sum_probs=3.1
Q ss_pred HHHHHHHH
Q 041715 103 TLIGVCIA 110 (150)
Q Consensus 103 ~~~~~~i~ 110 (150)
+|+++|++
T Consensus 330 IMvIIYLI 337 (358)
T PTZ00046 330 IMVIIYLI 337 (358)
T ss_pred HHHHHHHH
Confidence 33344443
No 100
>PHA02898 virion envelope protein; Provisional
Probab=20.25 E-value=3.2e+02 Score=19.50 Aligned_cols=28 Identities=7% Similarity=0.166 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHhhhccccccc-ccCce
Q 041715 67 VGYACVVLGVVNVFQGFEVMGEG-RSYAK 94 (150)
Q Consensus 67 ~Gr~~iiLgivNi~lGl~l~~~~-~~~w~ 94 (150)
.|-++++++.+--|.=+.-.+.| +..|+
T Consensus 17 ~GIiLL~~ACIfAfidfSK~~~~~~~~wR 45 (92)
T PHA02898 17 FGIILLIVACICAYIELSKSEKPADSALR 45 (92)
T ss_pred HHHHHHHHHHHHheehhhcCCCcchhHHH
Confidence 34444444444434333333233 34465
No 101
>PLN02844 oxidoreductase/ferric-chelate reductase
Probab=20.02 E-value=1.4e+02 Score=28.63 Aligned_cols=21 Identities=19% Similarity=0.344 Sum_probs=17.7
Q ss_pred eeeeeehHHHHHHHHHHHHHh
Q 041715 60 WKSYHHFVGYACVVLGVVNVF 80 (150)
Q Consensus 60 w~~~H~~~Gr~~iiLgivNi~ 80 (150)
.+.+|+|+||.+++++++=..
T Consensus 191 ~i~fHrWlGr~~~llallH~i 211 (722)
T PLN02844 191 SVRYHVWLGTSMIFFATVHGA 211 (722)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 478899999999999987654
Done!