BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041718
(295 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 96/179 (53%), Gaps = 20/179 (11%)
Query: 125 QDLYIRMSASEIENRNMDLELPLFELATIANATDNFSINNKLGEGGFGLVYKE------- 177
QD + + A E ++ +L F L + A+DNFS N LG GGFG VYK
Sbjct: 6 QDHFFDVPAEEDPEVHLG-QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTL 64
Query: 178 IAVKRLSKISEQGLK-ELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNS 236
+AVKRL + QG + + + EV + S HRNL++L G C+ E+LL+Y +M N S+ S
Sbjct: 65 VAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 124
Query: 237 FIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ E E LDW KR I G+ARG+ YLH +IIHRD+KA+N
Sbjct: 125 CLRER-----------PESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAAN 172
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 87/160 (54%), Gaps = 19/160 (11%)
Query: 144 ELPLFELATIANATDNFSINNKLGEGGFGLVYKE-------IAVKRLSKISEQGLK-ELK 195
+L F L + A+DNF N LG GGFG VYK +AVKRL + QG + + +
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 196 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQER 255
EV + S HRNL++L G C+ E+LL+Y +M N S+ S + E E
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER-----------PES 124
Query: 256 CKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
LDW KR I G+ARG+ YLH +IIHRD+KA+N
Sbjct: 125 QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAAN 164
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 36/166 (21%)
Query: 147 LFELATIANATDNFSIN---NKLGEGGFGLVYK------EIAVKRLSKISEQGLKELKN- 196
+EL + N D I+ NK+GEGGFG+VYK +AVK+L+ + + +ELK
Sbjct: 11 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQ 70
Query: 197 ---EVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ 253
E+ + +K QH NLV+LLG G++ L+Y +MPN SL +D+
Sbjct: 71 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----------------LDR 114
Query: 254 ERC----KILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
C L W R I G A G+ +LH++ IHRD+K++N
Sbjct: 115 LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSAN 157
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 36/166 (21%)
Query: 147 LFELATIANATDNFSIN---NKLGEGGFGLVYK------EIAVKRLSKISEQGLKELKN- 196
+EL + N D I+ NK+GEGGFG+VYK +AVK+L+ + + +ELK
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQ 76
Query: 197 ---EVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ 253
E+ + +K QH NLV+LLG G++ L+Y +MPN SL +D+
Sbjct: 77 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----------------LDR 120
Query: 254 ERC----KILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
C L W R I G A G+ +LH++ IHRD+K++N
Sbjct: 121 LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSAN 163
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 36/166 (21%)
Query: 147 LFELATIANATDNFSIN---NKLGEGGFGLVYK------EIAVKRLSKISEQGLKELKN- 196
+EL + N D I+ NK+GEGGFG+VYK +AVK+L+ + + +ELK
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQ 76
Query: 197 ---EVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ 253
E+ + +K QH NLV+LLG G++ L+Y +MPN SL +D+
Sbjct: 77 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----------------LDR 120
Query: 254 ERC----KILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
C L W R I G A G+ +LH++ IHRD+K++N
Sbjct: 121 LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSAN 163
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 84/166 (50%), Gaps = 36/166 (21%)
Query: 147 LFELATIANATDNFSIN---NKLGEGGFGLVYK------EIAVKRLSKISEQGLKELKN- 196
+EL + N D I+ NK GEGGFG+VYK +AVK+L+ + + +ELK
Sbjct: 8 FYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQ 67
Query: 197 ---EVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ 253
E+ + +K QH NLV+LLG G++ L+Y + PN SL +D+
Sbjct: 68 FDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL----------------LDR 111
Query: 254 ERC----KILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
C L W R I G A G+ +LH++ IHRD+K++N
Sbjct: 112 LSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSAN 154
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 82/153 (53%), Gaps = 21/153 (13%)
Query: 150 LATIANATDNFSINNKLGEGGFGLVYK-------EIAVKRLSKISEQGLKELKNEVILFS 202
L + AT+NF +G G FG VYK ++A+KR + S QG++E + E+ S
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 203 KLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWS 262
+H +LV L+G C + E +LIY++M N +L ++ + + T+ S W
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMS-----------WE 139
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+R I G ARG+ YLH + IIHRD+K+ N
Sbjct: 140 QRLEICIGAARGLHYLHTRA---IIHRDVKSIN 169
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 82/153 (53%), Gaps = 21/153 (13%)
Query: 150 LATIANATDNFSINNKLGEGGFGLVYK-------EIAVKRLSKISEQGLKELKNEVILFS 202
L + AT+NF +G G FG VYK ++A+KR + S QG++E + E+ S
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 203 KLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWS 262
+H +LV L+G C + E +LIY++M N +L ++ + + T+ S W
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMS-----------WE 139
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+R I G ARG+ YLH + IIHRD+K+ N
Sbjct: 140 QRLEICIGAARGLHYLHTRA---IIHRDVKSIN 169
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 18/150 (12%)
Query: 159 NFSINNKLGEGGFGLVYKE-------------IAVKRLSKISEQGLKELKNEVILFSKLQ 205
N + +LGEG FG V+ +AVK L S+ K+ E L + LQ
Sbjct: 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 73
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H ++VK G C++G+ ++++E+M + LN F+ + ++ + L S+
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVL--MAEGNPPTELTQSQML 131
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
HI A G++YL + +HRDL N
Sbjct: 132 HIAQQIAAGMVYL---ASQHFVHRDLATRN 158
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 26/146 (17%)
Query: 160 FSINNKLGEGGFGLVYK------EIAVKRLSKISE----QGLKELKNEVILFSKLQHRNL 209
++ +G GGFG VY+ E+AVK + Q ++ ++ E LF+ L+H N+
Sbjct: 9 LTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
+ L G C++ L+ EF LN VL+ R D +++W+ +
Sbjct: 69 IALRGVCLKEPNLCLVMEFARGGPLNR------VLSGKRIPPDI----LVNWAVQI---- 114
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
ARG+ YLH ++ + IIHRDLK+SN
Sbjct: 115 --ARGMNYLHDEAIVPIIHRDLKSSN 138
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 165 KLGEGGFGLVYKE-------------IAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 211
+LGEG FG V+ +AVK L + SE ++ + E L + LQH+++V+
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGT 271
G C +G L+++E+M + LN F+ + + + + L + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
A G++YL + L +HRDL N
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRN 188
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 165 KLGEGGFGLVYKE-------------IAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 211
+LGEG FG V+ +AVK L + SE ++ + E L + LQH+++V+
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGT 271
G C +G L+++E+M + LN F+ + + + + L + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
A G++YL + L +HRDL N
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRN 159
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 165 KLGEGGFGLVYKE-------------IAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 211
+LGEG FG V+ +AVK L + SE ++ + E L + LQH+++V+
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGT 271
G C +G L+++E+M + LN F+ + + + + L + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
A G++YL + L +HRDL N
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRN 165
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 159 NFSINNKLGEGGFGLVYKE-------------IAVKRLSKISEQGLKELKNEVILFSKLQ 205
+ + +LGEG FG V+ +AVK L + K+ + E L + LQ
Sbjct: 16 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ 75
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENF--VLTLMRSFVDQERCKILDWSK 263
H ++VK G C G+ ++++E+M + LN F+ + + L+ Q + + L S+
Sbjct: 76 HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE-LGLSQ 134
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
HI A G++YL + +HRDL N
Sbjct: 135 MLHIASQIASGMVYL---ASQHFVHRDLATRN 163
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 34/167 (20%)
Query: 144 ELPLFELATIANATDNFSINNKLGEGGFGLVYKEIAVKRLSKISEQGL------------ 191
E P L T+A+ + ++G+GGFGLV+K VK S ++ + L
Sbjct: 7 EFPKSRLPTLAD--NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 192 ---KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMR 248
+E + EV + S L H N+VKL G + ++ EF+P L +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL--------- 113
Query: 249 SFVDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
++ + WS + ++ A G+ Y+ Q+ I+HRDL++ N
Sbjct: 114 -----DKAHPIKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPN 154
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 34/167 (20%)
Query: 144 ELPLFELATIANATDNFSINNKLGEGGFGLVYKEIAVKRLSKISEQGL------------ 191
E P L T+A+ + ++G+GGFGLV+K VK S ++ + L
Sbjct: 7 EFPKSRLPTLAD--NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 192 ---KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMR 248
+E + EV + S L H N+VKL G + ++ EF+P L +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL--------- 113
Query: 249 SFVDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
++ + WS + ++ A G+ Y+ Q+ I+HRDL++ N
Sbjct: 114 -----DKAHPIKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPN 154
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 34/167 (20%)
Query: 144 ELPLFELATIANATDNFSINNKLGEGGFGLVYKEIAVKRLSKISEQGL------------ 191
E P L T+A+ + ++G+GGFGLV+K VK S ++ + L
Sbjct: 7 EFPKSRLPTLAD--NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 192 ---KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMR 248
+E + EV + S L H N+VKL G + ++ EF+P L +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL--------- 113
Query: 249 SFVDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
++ + WS + ++ A G+ Y+ Q+ I+HRDL++ N
Sbjct: 114 -----DKAHPIKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPN 154
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 27/152 (17%)
Query: 159 NFSINNKLGEGGFGLVYK-------------EIAVKRLSKI-SEQGLKELKNEVILFSKL 204
N ++ LG G FG VY+ ++AVK L ++ SEQ + E ++ SKL
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 91
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERC-KILDWSK 263
H+N+V+ +G +Q + ++ E M L SF+ E R Q +LD
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET------RPRPSQPSSLAMLDL-- 143
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H+ A G YL ++ IHRD+ A N
Sbjct: 144 -LHVARDIACGCQYLEEN---HFIHRDIAARN 171
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 27/152 (17%)
Query: 159 NFSINNKLGEGGFGLVYK-------------EIAVKRLSKI-SEQGLKELKNEVILFSKL 204
N ++ LG G FG VY+ ++AVK L ++ SEQ + E ++ SKL
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 105
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERC-KILDWSK 263
H+N+V+ +G +Q + ++ E M L SF+ E R Q +LD
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET------RPRPSQPSSLAMLDL-- 157
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H+ A G YL ++ IHRD+ A N
Sbjct: 158 -LHVARDIACGCQYLEEN---HFIHRDIAARN 185
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 21/145 (14%)
Query: 159 NFSINNKLGEGGFGLVYK------EIAVKRL--SKISEQGLKELKNEVILFSKLQHRNLV 210
+ +I K+G G FG V++ ++AVK L + + E EV + +L+H N+V
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+G Q ++ E++ SL + ++ R +D+ R R +
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA----REQLDERR--------RLSMAYD 145
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ YLH + I+HRDLK+ N
Sbjct: 146 VAKGMNYLHNRNP-PIVHRDLKSPN 169
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 53/207 (25%)
Query: 130 RMSASEIENRNMDLELPLFELATIANAT------DNFSINNK------------------ 165
R E++ M+L+ P ++L+ + +T N+S K
Sbjct: 3 RRKHQELQAMQMELQSPEYKLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLI 62
Query: 166 --LGEGGFGLVYK-------------EIAVKRLSKI-SEQGLKELKNEVILFSKLQHRNL 209
LG G FG VY+ ++AVK L ++ SEQ + E ++ SK H+N+
Sbjct: 63 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 122
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERC-KILDWSKRFHII 268
V+ +G +Q + ++ E M L SF+ E R Q +LD H+
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRET------RPRPSQPSSLAMLDL---LHVA 173
Query: 269 CGTARGVMYLHQDSKLRIIHRDLKASN 295
A G YL ++ IHRD+ A N
Sbjct: 174 RDIACGCQYLEEN---HFIHRDIAARN 197
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 27/152 (17%)
Query: 159 NFSINNKLGEGGFGLVYK-------------EIAVKRLSKI-SEQGLKELKNEVILFSKL 204
N ++ LG G FG VY+ ++AVK L ++ SEQ + E ++ SK
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERC-KILDWSK 263
H+N+V+ +G +Q + ++ E M L SF+ E R Q +LD
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET------RPRPSQPSSLAMLDL-- 143
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H+ A G YL ++ IHRD+ A N
Sbjct: 144 -LHVARDIACGCQYLEEN---HFIHRDIAARN 171
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 27/152 (17%)
Query: 159 NFSINNKLGEGGFGLVYK-------------EIAVKRLSKI-SEQGLKELKNEVILFSKL 204
N ++ LG G FG VY+ ++AVK L ++ SEQ + E ++ SK
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERC-KILDWSK 263
H+N+V+ +G +Q + ++ E M L SF+ E R Q +LD
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET------RPRPSQPSSLAMLDL-- 143
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H+ A G YL ++ IHRD+ A N
Sbjct: 144 -LHVARDIACGCQYLEEN---HFIHRDIAARN 171
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 27/152 (17%)
Query: 159 NFSINNKLGEGGFGLVYK-------------EIAVKRLSKI-SEQGLKELKNEVILFSKL 204
N ++ LG G FG VY+ ++AVK L ++ SEQ + E ++ SK
Sbjct: 49 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 108
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERC-KILDWSK 263
H+N+V+ +G +Q + ++ E M L SF+ E R Q +LD
Sbjct: 109 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET------RPRPSQPSSLAMLDL-- 160
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H+ A G YL ++ IHRD+ A N
Sbjct: 161 -LHVARDIACGCQYLEEN---HFIHRDIAARN 188
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 27/152 (17%)
Query: 159 NFSINNKLGEGGFGLVYK-------------EIAVKRLSKI-SEQGLKELKNEVILFSKL 204
N ++ LG G FG VY+ ++AVK L ++ SEQ + E ++ SK
Sbjct: 23 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 82
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERC-KILDWSK 263
H+N+V+ +G +Q + ++ E M L SF+ E R Q +LD
Sbjct: 83 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET------RPRPSQPSSLAMLDL-- 134
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H+ A G YL ++ IHRD+ A N
Sbjct: 135 -LHVARDIACGCQYLEEN---HFIHRDIAARN 162
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 27/152 (17%)
Query: 159 NFSINNKLGEGGFGLVYK-------------EIAVKRLSKI-SEQGLKELKNEVILFSKL 204
N ++ LG G FG VY+ ++AVK L ++ SEQ + E ++ SK
Sbjct: 48 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 107
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERC-KILDWSK 263
H+N+V+ +G +Q + ++ E M L SF+ E R Q +LD
Sbjct: 108 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET------RPRPSQPSSLAMLDL-- 159
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H+ A G YL ++ IHRD+ A N
Sbjct: 160 -LHVARDIACGCQYLEEN---HFIHRDIAARN 187
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 27/152 (17%)
Query: 159 NFSINNKLGEGGFGLVYK-------------EIAVKRLSKI-SEQGLKELKNEVILFSKL 204
N ++ LG G FG VY+ ++AVK L ++ SEQ + E ++ SK
Sbjct: 72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 131
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERC-KILDWSK 263
H+N+V+ +G +Q + ++ E M L SF+ E R Q +LD
Sbjct: 132 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET------RPRPSQPSSLAMLDL-- 183
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H+ A G YL ++ IHRD+ A N
Sbjct: 184 -LHVARDIACGCQYLEEN---HFIHRDIAARN 211
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 27/152 (17%)
Query: 159 NFSINNKLGEGGFGLVYK-------------EIAVKRLSKI-SEQGLKELKNEVILFSKL 204
N ++ LG G FG VY+ ++AVK L ++ SEQ + E ++ SK
Sbjct: 38 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 97
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERC-KILDWSK 263
H+N+V+ +G +Q + ++ E M L SF+ E R Q +LD
Sbjct: 98 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET------RPRPSQPSSLAMLDL-- 149
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H+ A G YL ++ IHRD+ A N
Sbjct: 150 -LHVARDIACGCQYLEEN---HFIHRDIAARN 177
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 27/152 (17%)
Query: 159 NFSINNKLGEGGFGLVYK-------------EIAVKRLSKI-SEQGLKELKNEVILFSKL 204
N ++ LG G FG VY+ ++AVK L ++ SEQ + E ++ SK
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKF 105
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERC-KILDWSK 263
H+N+V+ +G +Q + ++ E M L SF+ E R Q +LD
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET------RPRPSQPSSLAMLDL-- 157
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H+ A G YL ++ IHRD+ A N
Sbjct: 158 -LHVARDIACGCQYLEEN---HFIHRDIAARN 185
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 27/152 (17%)
Query: 159 NFSINNKLGEGGFGLVYK-------------EIAVKRLSKI-SEQGLKELKNEVILFSKL 204
N ++ LG G FG VY+ ++AVK L ++ SEQ + E ++ SK
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 105
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERC-KILDWSK 263
H+N+V+ +G +Q + ++ E M L SF+ E R Q +LD
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRET------RPRPSQPSSLAMLDL-- 157
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H+ A G YL ++ IHRD+ A N
Sbjct: 158 -LHVARDIACGCQYLEEN---HFIHRDIAARN 185
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 25/151 (16%)
Query: 159 NFSINNKLGEGGFGLVYK-------------EIAVKRLSKI-SEQGLKELKNEVILFSKL 204
N ++ LG G FG VY+ ++AVK L ++ SEQ + E ++ SK
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
H+N+V+ +G +Q + ++ E M L SF+ E S + +LD
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSL-----AMLDL--- 142
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H+ A G YL ++ IHRD+ A N
Sbjct: 143 LHVARDIACGCQYLEEN---HFIHRDIAARN 170
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 27/152 (17%)
Query: 159 NFSINNKLGEGGFGLVYK-------------EIAVKRLSKI-SEQGLKELKNEVILFSKL 204
N ++ LG G FG VY+ ++AVK L ++ SEQ + E ++ SK
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERC-KILDWSK 263
H+N+V+ +G +Q + ++ E M L SF+ E R Q +LD
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET------RPRPSQPSSLAMLDL-- 142
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H+ A G YL ++ IHRD+ A N
Sbjct: 143 -LHVARDIACGCQYLEEN---HFIHRDIAARN 170
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 159 NFSINNKLGEGGFGLVYK-----EIAVKRL--SKISEQGLKELKNEVILFSKLQHRNLVK 211
++ ++G G FG VYK ++AVK L + + Q L+ KNEV + K +H N++
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGT 271
+G + + ++ ++ SL + + M+ +D R T
Sbjct: 85 FMGYSTK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ--------------T 129
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
ARG+ YLH S IIHRDLK++N
Sbjct: 130 ARGMDYLHAKS---IIHRDLKSNN 150
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 16/151 (10%)
Query: 158 DNFSINNKLGEGGFGLVYK----------EIAVKRLSK-ISEQGLKELKNEVILFSKL-Q 205
++ + +GEG FG V K + A+KR+ + S+ ++ E+ + KL
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSF-VDQERCKILDWSKR 264
H N++ LLG C L E+ P+ +L F+ ++ VL +F + L +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H ARG+ YL Q + IHRDL A N
Sbjct: 145 LHFAADVARGMDYLSQK---QFIHRDLAARN 172
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 25/144 (17%)
Query: 159 NFSINNKLGEGGFGLVYK-----EIAVKRL--SKISEQGLKELKNEVILFSKLQHRNLVK 211
++ ++G G FG VYK ++AVK L + + Q L+ KNEV + K +H N++
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGT 271
+G + ++ ++ SL + + M+ +D R T
Sbjct: 85 FMGYST-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ--------------T 129
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
ARG+ YLH S IIHRDLK++N
Sbjct: 130 ARGMDYLHAKS---IIHRDLKSNN 150
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 159 NFSINNKLGEGGFGLVYK-----EIAVKRL--SKISEQGLKELKNEVILFSKLQHRNLVK 211
++ ++G G FG VYK ++AVK L + + Q L+ KNEV + K +H N++
Sbjct: 13 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 72
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGT 271
+G + + ++ ++ SL + + M+ +D R T
Sbjct: 73 FMGYSTK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ--------------T 117
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
ARG+ YLH S IIHRDLK++N
Sbjct: 118 ARGMDYLHAKS---IIHRDLKSNN 138
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 16/151 (10%)
Query: 158 DNFSINNKLGEGGFGLVYK----------EIAVKRLSK-ISEQGLKELKNEVILFSKL-Q 205
++ + +GEG FG V K + A+KR+ + S+ ++ E+ + KL
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSF-VDQERCKILDWSKR 264
H N++ LLG C L E+ P+ +L F+ ++ VL +F + L +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H ARG+ YL Q + IHRDL A N
Sbjct: 135 LHFAADVARGMDYLSQK---QFIHRDLAARN 162
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 21/145 (14%)
Query: 159 NFSINNKLGEGGFGLVYK------EIAVKRL--SKISEQGLKELKNEVILFSKLQHRNLV 210
+ +I K+G G FG V++ ++AVK L + + E EV + +L+H N+V
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+G Q ++ E++ SL + ++ R +D+ R R +
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA----REQLDERR--------RLSMAYD 145
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ YLH + I+HR+LK+ N
Sbjct: 146 VAKGMNYLHNRNP-PIVHRNLKSPN 169
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 26/161 (16%)
Query: 158 DNFSINNKLGEGGFGLVYKE-------------IAVKRLSKISEQGLK-ELKNEVILFSK 203
+N +GEG FG V++ +AVK L + + ++ + + E L ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL---------MRSFVDQE 254
+ N+VKLLG C G+ L++E+M LN F+ T+ R+ V
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
L +++ I A G+ YL S+ + +HRDL N
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRN 204
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 165 KLGEGGFGLVYK-------------EIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLV 210
+LGE FG VYK +A+K L +E L+E ++E +L ++LQH N+V
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCK-ILDWSKRFHIIC 269
LLG + + +I+ + + L+ F+ + + S D K L+ H++
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A G+ YL S ++H+DL N
Sbjct: 136 QIAAGMEYL---SSHHVVHKDLATRN 158
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 16/151 (10%)
Query: 158 DNFSINNKLGEGGFGLVYK----------EIAVKRLSK-ISEQGLKELKNEVILFSKL-Q 205
++ + +GEG FG V K + A+KR+ + S+ ++ E+ + KL
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSF-VDQERCKILDWSKR 264
H N++ LLG C L E+ P+ +L F+ ++ VL +F + L +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H ARG+ YL Q + IHR+L A N
Sbjct: 142 LHFAADVARGMDYLSQK---QFIHRNLAARN 169
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 165 KLGEGGFGLVYK-------------EIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLV 210
+LGE FG VYK +A+K L +E L+E ++E +L ++LQH N+V
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCK-ILDWSKRFHIIC 269
LLG + + +I+ + + L+ F+ + + S D K L+ H++
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A G+ YL S ++H+DL N
Sbjct: 153 QIAAGMEYL---SSHHVVHKDLATRN 175
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 156 ATDNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLK-ELKNEVILF 201
A + +++ +LG+G FG+VY+ +A+K +++ + + E NE +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
+ ++V+LLG QG+ L+I E M L S++ +L + +
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPAMANNPVLAPPSL 137
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
SK + A G+ YL+ + + +HRDL A N
Sbjct: 138 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARN 168
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 156 ATDNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLK-ELKNEVILF 201
A + +++ +LG+G FG+VY+ +A+K +++ + + E NE +
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
+ ++V+LLG QG+ L+I E M L S++ +L + +
Sbjct: 73 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPAMANNPVLAPPSL 127
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
SK + A G+ YL+ + + +HRDL A N
Sbjct: 128 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARN 158
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 29/146 (19%)
Query: 159 NFSINNKLGEGGFGLVYK-----EIAVKRL--SKISEQGLKELKNEVILFSKLQHRNLVK 211
++ ++G G FG VYK ++AVK L + + Q L+ KNEV + K +H N++
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ--ERCKILDWSKRFHIIC 269
+G Y P ++ + E L ++ E K++D +++
Sbjct: 69 FMG-----------YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ----- 112
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
TA+G+ YLH S IIHRDLK++N
Sbjct: 113 -TAQGMDYLHAKS---IIHRDLKSNN 134
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 165 KLGEGGFGLVY------------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 212
+LG+G FG V + +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 213 LGCCIQ-GEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C G L LI EF+P SL ++ Q+ + +D K
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYL--------------QKHKERIDHIKLLQYTSQ 125
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R IHRDL N
Sbjct: 126 ICKGMEYL---GTKRYIHRDLATRN 147
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSKIS-EQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L++ + + E +E ++ + + H +LV+L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + L+ + MP+ L ++ E+ + + + +L+W + A
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEH------KDNIGSQL--LLNWCVQI------A 150
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+MYL + R++HRDL A N
Sbjct: 151 KGMMYLEER---RLVHRDLAARN 170
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 29/146 (19%)
Query: 159 NFSINNKLGEGGFGLVYK-----EIAVKRL--SKISEQGLKELKNEVILFSKLQHRNLVK 211
++ ++G G FG VYK ++AVK L + + Q L+ KNEV + K +H N++
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ--ERCKILDWSKRFHIIC 269
+G Y P ++ + E L ++ E K++D +++
Sbjct: 74 FMG-----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ----- 117
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
TA+G+ YLH S IIHRDLK++N
Sbjct: 118 -TAQGMDYLHAKS---IIHRDLKSNN 139
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 27/150 (18%)
Query: 155 NATDNFSINNKLGEGGFGLVYK----EIAVKRLSKI----SEQGLKELKNEVILFSKLQH 206
N D + I +LG+G FG VYK E +V +K+ SE+ L++ E+ + + H
Sbjct: 34 NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 93
Query: 207 RNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFH 266
N+VKLL ++ EF ++++ + E L R + +
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-----LERPLTESQ----------IQ 138
Query: 267 IICG-TARGVMYLHQDSKLRIIHRDLKASN 295
++C T + YLH + +IIHRDLKA N
Sbjct: 139 VVCKQTLDALNYLHDN---KIIHRDLKAGN 165
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 27/150 (18%)
Query: 155 NATDNFSINNKLGEGGFGLVYK----EIAVKRLSKI----SEQGLKELKNEVILFSKLQH 206
N D + I +LG+G FG VYK E +V +K+ SE+ L++ E+ + + H
Sbjct: 34 NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 93
Query: 207 RNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFH 266
N+VKLL ++ EF ++++ + E L R + +
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-----LERPLTESQ----------IQ 138
Query: 267 IICG-TARGVMYLHQDSKLRIIHRDLKASN 295
++C T + YLH + +IIHRDLKA N
Sbjct: 139 VVCKQTLDALNYLHDN---KIIHRDLKAGN 165
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 29/146 (19%)
Query: 159 NFSINNKLGEGGFGLVYK-----EIAVKRL--SKISEQGLKELKNEVILFSKLQHRNLVK 211
++ ++G G FG VYK ++AVK L + + Q L+ KNEV + K +H N++
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ--ERCKILDWSKRFHIIC 269
+G Y P ++ + E L ++ E K++D +++
Sbjct: 74 FMG-----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ----- 117
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
TA+G+ YLH S IIHRDLK++N
Sbjct: 118 -TAQGMDYLHAKS---IIHRDLKSNN 139
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 27/150 (18%)
Query: 155 NATDNFSINNKLGEGGFGLVYK----EIAVKRLSKI----SEQGLKELKNEVILFSKLQH 206
N D + I +LG+G FG VYK E +V +K+ SE+ L++ E+ + + H
Sbjct: 34 NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 93
Query: 207 RNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFH 266
N+VKLL ++ EF ++++ + E L R + +
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-----LERPLTESQ----------IQ 138
Query: 267 IICG-TARGVMYLHQDSKLRIIHRDLKASN 295
++C T + YLH + +IIHRDLKA N
Sbjct: 139 VVCKQTLDALNYLHDN---KIIHRDLKAGN 165
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 29/146 (19%)
Query: 159 NFSINNKLGEGGFGLVYK-----EIAVKRL--SKISEQGLKELKNEVILFSKLQHRNLVK 211
++ ++G G FG VYK ++AVK L + + Q L+ KNEV + K +H N++
Sbjct: 11 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 70
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ--ERCKILDWSKRFHIIC 269
+G Y P ++ + E L ++ E K++D +++
Sbjct: 71 FMG-----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ----- 114
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
TA+G+ YLH S IIHRDLK++N
Sbjct: 115 -TAQGMDYLHAKS---IIHRDLKSNN 136
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 29/146 (19%)
Query: 159 NFSINNKLGEGGFGLVYK-----EIAVKRL--SKISEQGLKELKNEVILFSKLQHRNLVK 211
++ ++G G FG VYK ++AVK L + + Q L+ KNEV + K +H N++
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ--ERCKILDWSKRFHIIC 269
+G Y P ++ + E L ++ E K++D +++
Sbjct: 69 FMG-----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ----- 112
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
TA+G+ YLH S IIHRDLK++N
Sbjct: 113 -TAQGMDYLHAKS---IIHRDLKSNN 134
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 29/146 (19%)
Query: 159 NFSINNKLGEGGFGLVYK-----EIAVKRL--SKISEQGLKELKNEVILFSKLQHRNLVK 211
++ ++G G FG VYK ++AVK L + + Q L+ KNEV + K +H N++
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ--ERCKILDWSKRFHIIC 269
+G Y P ++ + E L ++ E K++D +++
Sbjct: 69 FMG-----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ----- 112
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
TA+G+ YLH S IIHRDLK++N
Sbjct: 113 -TAQGMDYLHAKS---IIHRDLKSNN 134
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 31/145 (21%)
Query: 165 KLGEGGFGLVY------------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 212
+LG+G FG V + +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 213 LGCCIQ-GEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C G L LI E++P SL ++ Q + +D K
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--------------QAHAERIDHIKLLQYTSQ 125
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R IHRDL N
Sbjct: 126 ICKGMEYL---GTKRYIHRDLATRN 147
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 29/146 (19%)
Query: 159 NFSINNKLGEGGFGLVYK-----EIAVKRL--SKISEQGLKELKNEVILFSKLQHRNLVK 211
++ ++G G FG VYK ++AVK L + + Q L+ KNEV + K +H N++
Sbjct: 37 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ--ERCKILDWSKRFHIIC 269
+G Y P ++ + E L ++ E K++D +++
Sbjct: 97 FMG-----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ----- 140
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
TA+G+ YLH S IIHRDLK++N
Sbjct: 141 -TAQGMDYLHAKS---IIHRDLKSNN 162
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 29/146 (19%)
Query: 159 NFSINNKLGEGGFGLVYK-----EIAVKRL--SKISEQGLKELKNEVILFSKLQHRNLVK 211
++ ++G G FG VYK ++AVK L + + Q L+ KNEV + K +H N++
Sbjct: 37 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ--ERCKILDWSKRFHIIC 269
+G Y P ++ + E L ++ E K++D +++
Sbjct: 97 FMG-----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ----- 140
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
TA+G+ YLH S IIHRDLK++N
Sbjct: 141 -TAQGMDYLHAKS---IIHRDLKSNN 162
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSKIS-EQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L++ + + E +E ++ + + H +LV+L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + L+ + MP+ L ++ E+ + + + +L+W + A
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEH------KDNIGSQL--LLNWCVQI------A 127
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+MYL + R++HRDL A N
Sbjct: 128 KGMMYLEER---RLVHRDLAARN 147
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 29/146 (19%)
Query: 159 NFSINNKLGEGGFGLVYK-----EIAVKRL--SKISEQGLKELKNEVILFSKLQHRNLVK 211
++ ++G G FG VYK ++AVK L + + Q L+ KNEV + K +H N++
Sbjct: 36 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 95
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ--ERCKILDWSKRFHIIC 269
+G Y P ++ + E L ++ E K++D +++
Sbjct: 96 FMG-----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ----- 139
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
TA+G+ YLH S IIHRDLK++N
Sbjct: 140 -TAQGMDYLHAKS---IIHRDLKSNN 161
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 29/146 (19%)
Query: 159 NFSINNKLGEGGFGLVYK-----EIAVKRL--SKISEQGLKELKNEVILFSKLQHRNLVK 211
++ ++G G FG VYK ++AVK L + + Q L+ KNEV + K +H N++
Sbjct: 29 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 88
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ--ERCKILDWSKRFHIIC 269
+G Y P ++ + E L ++ E K++D +++
Sbjct: 89 FMG-----------YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ----- 132
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
TA+G+ YLH S IIHRDLK++N
Sbjct: 133 -TAQGMDYLHAKS---IIHRDLKSNN 154
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 154 ANATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSK 203
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 204 LQHRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKI 258
L H N+VKLL I E KL L++EF+ ++ L +F+ L L++S++ Q
Sbjct: 62 LNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQ----- 114
Query: 259 LDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 115 ------------LLQGLAFCHSH---RVLHRDLKPQN 136
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 156 ATDNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLK-ELKNEVILF 201
A + +++ +LG+G FG+VY+ +A+K +++ + + E NE +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
+ ++V+LLG QG+ L+I E M L S++ +L +
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMENNPVLAPPSL 137
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
SK + A G+ YL+ + + +HRDL A N
Sbjct: 138 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARN 168
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 156 ATDNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLK-ELKNEVILF 201
A + +++ +LG+G FG+VY+ +A+K +++ + + E NE +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
+ ++V+LLG QG+ L+I E M L S++ +L +
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMENNPVLAPPSL 130
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
SK + A G+ YL+ + + +HRDL A N
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARN 161
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 156 ATDNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLK-ELKNEVILF 201
A + +++ +LG+G FG+VY+ +A+K +++ + + E NE +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
+ ++V+LLG QG+ L+I E M L S++ +L +
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMENNPVLAPPSL 124
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
SK + A G+ YL+ + + +HRDL A N
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARN 155
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 156 ATDNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLK-ELKNEVILF 201
A + +++ +LG+G FG+VY+ +A+K +++ + + E NE +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
+ ++V+LLG QG+ L+I E M L S++ +L +
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMENNPVLAPPSL 131
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
SK + A G+ YL+ + + +HRDL A N
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARN 162
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 165 KLGEGGFGLVY------------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 212
+LG+G FG V + +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 213 LGCCIQ-GEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C G L LI E++P SL ++ Q+ + +D K
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--------------QKHKERIDHIKLLQYTSQ 153
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R IHRDL N
Sbjct: 154 ICKGMEYL---GTKRYIHRDLATRN 175
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 156 ATDNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLK-ELKNEVILF 201
A + +++ +LG+G FG+VY+ +A+K +++ + + E NE +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
+ ++V+LLG QG+ L+I E M L S++ +L +
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMENNPVLAPPSL 130
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
SK + A G+ YL+ + + +HRDL A N
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARN 161
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 156 ATDNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLK-ELKNEVILF 201
A + +++ +LG+G FG+VY+ +A+K +++ + + E NE +
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
+ ++V+LLG QG+ L+I E M L S++ +L +
Sbjct: 74 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMENNPVLAPPSL 128
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
SK + A G+ YL+ + + +HRDL A N
Sbjct: 129 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARN 159
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 156 ATDNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLK-ELKNEVILF 201
A + +++ +LG+G FG+VY+ +A+K +++ + + E NE +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
+ ++V+LLG QG+ L+I E M L S++ +L +
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMENNPVLAPPSL 131
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
SK + A G+ YL+ + + +HRDL A N
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARN 162
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 156 ATDNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLK-ELKNEVILF 201
A + +++ +LG+G FG+VY+ +A+K +++ + + E NE +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
+ ++V+LLG QG+ L+I E M L S++ +L +
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMENNPVLAPPSL 124
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
SK + A G+ YL+ + + +HRDL A N
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARN 155
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 156 ATDNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLK-ELKNEVILF 201
A + +++ +LG+G FG+VY+ +A+K +++ + + E NE +
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
+ ++V+LLG QG+ L+I E M L S++ +L +
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMENNPVLAPPSL 122
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
SK + A G+ YL+ + + +HRDL A N
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARN 153
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 165 KLGEGGFGLVY------------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 212
+LG+G FG V + +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 213 LGCCIQ-GEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C G L LI E++P SL ++ Q+ + +D K
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--------------QKHKERIDHIKLLQYTSQ 129
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R IHRDL N
Sbjct: 130 ICKGMEYL---GTKRYIHRDLATRN 151
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 165 KLGEGGFGLVY------------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 212
+LG+G FG V + +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 213 LGCCIQ-GEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C G L LI E++P SL ++ Q+ + +D K
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--------------QKHKERIDHIKLLQYTSQ 127
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R IHRDL N
Sbjct: 128 ICKGMEYL---GTKRYIHRDLATRN 149
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 165 KLGEGGFGLVY------------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 212
+LG+G FG V + +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 213 LGCCIQ-GEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C G L LI E++P SL ++ Q+ + +D K
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--------------QKHKERIDHIKLLQYTSQ 128
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R IHRDL N
Sbjct: 129 ICKGMEYL---GTKRYIHRDLATRN 150
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 24/145 (16%)
Query: 158 DNFSINNKLGEGGFGLVYK-----EIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ I +G+G FG VY E+A++ + + +E LK K EV+ + + +H N+V
Sbjct: 33 EQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+G C+ +I ++L S + + + +LD +K I
Sbjct: 93 LFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI--------------VLDVNKTRQIAQE 138
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YLH I+H+DLK+ N
Sbjct: 139 IVKGMGYLHAKG---ILHKDLKSKN 160
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 165 KLGEGGFGLVY------------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 212
+LG+G FG V + +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 213 LGCCIQ-GEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C G L LI E++P SL ++ Q+ + +D K
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--------------QKHKERIDHIKLLQYTSQ 125
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R IHRDL N
Sbjct: 126 ICKGMEYL---GTKRYIHRDLATRN 147
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 165 KLGEGGFGLVY------------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 212
+LG+G FG V + +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 213 LGCCIQ-GEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C G L LI E++P SL ++ Q+ + +D K
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--------------QKHKERIDHIKLLQYTSQ 122
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R IHRDL N
Sbjct: 123 ICKGMEYL---GTKRYIHRDLATRN 144
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 156 ATDNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLK-ELKNEVILF 201
A + +++ +LG+G FG+VY+ +A+K +++ + + E NE +
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
+ ++V+LLG QG+ L+I E M L S++ +L +
Sbjct: 105 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMENNPVLAPPSL 159
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
SK + A G+ YL+ + + +HRDL A N
Sbjct: 160 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARN 190
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 165 KLGEGGFGLVY------------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 212
+LG+G FG V + +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 213 LGCCIQ-GEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C G L LI E++P SL ++ Q+ + +D K
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--------------QKHKERIDHIKLLQYTSQ 122
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R IHRDL N
Sbjct: 123 ICKGMEYL---GTKRYIHRDLATRN 144
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 165 KLGEGGFGLVY------------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 212
+LG+G FG V + +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 213 LGCCIQ-GEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C G L LI E++P SL ++ Q+ + +D K
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--------------QKHKERIDHIKLLQYTSQ 121
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R IHRDL N
Sbjct: 122 ICKGMEYL---GTKRYIHRDLATRN 143
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 165 KLGEGGFGLVY------------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 212
+LG+G FG V + +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 213 LGCCIQ-GEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C G L LI E++P SL ++ Q+ + +D K
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--------------QKHKERIDHIKLLQYTSQ 126
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R IHRDL N
Sbjct: 127 ICKGMEYL---GTKRYIHRDLATRN 148
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 37/157 (23%)
Query: 154 ANATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSK 203
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 204 LQHRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKI 258
L H N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 61 LNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ----- 113
Query: 259 LDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 114 ------------LLQGLAFCHSH---RVLHRDLKPEN 135
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 165 KLGEGGFGLVY------------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 212
+LG+G FG V + +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 213 LGCCIQ-GEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C G L LI E++P SL ++ Q+ + +D K
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--------------QKHKERIDHIKLLQYTSQ 122
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R IHRDL N
Sbjct: 123 ICKGMEYL---GTKRYIHRDLATRN 144
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 37/157 (23%)
Query: 154 ANATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSK 203
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 204 LQHRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKI 258
L H N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 61 LNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ----- 113
Query: 259 LDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 114 ------------LLQGLAFCHSH---RVLHRDLKPQN 135
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 37/157 (23%)
Query: 154 ANATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSK 203
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 204 LQHRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKI 258
L H N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 61 LNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ----- 113
Query: 259 LDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 114 ------------LLQGLAFCHSH---RVLHRDLKPQN 135
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 37/157 (23%)
Query: 154 ANATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSK 203
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 204 LQHRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKI 258
L H N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 62 LNHPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ----- 114
Query: 259 LDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 115 ------------LLQGLAFCHSH---RVLHRDLKPQN 136
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 165 KLGEGGFGLVY------------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 212
+LG+G FG V + +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 213 LGCCIQ-GEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C G L LI E++P SL ++ Q+ + +D K
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--------------QKHKERIDHIKLLQYTSQ 120
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R IHRDL N
Sbjct: 121 ICKGMEYL---GTKRYIHRDLATRN 142
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 37/155 (23%)
Query: 156 ATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQ 205
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 206 HRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILD 260
H N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 62 HPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 112
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 113 ----------LLQGLAFCHSH---RVLHRDLKPQN 134
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 37/155 (23%)
Query: 156 ATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQ 205
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 206 HRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILD 260
H N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 64 HPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 114
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 115 ----------LLQGLAFCHSH---RVLHRDLKPQN 136
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 37/153 (24%)
Query: 158 DNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQHR 207
+NF K+GEG +G+VYK +A+K RL +E E+ L +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 208 NLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILDWS 262
N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 70 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ--------- 118
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 119 --------LLQGLAFCHSH---RVLHRDLKPQN 140
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 165 KLGEGGFGLVY------------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 212
+LG+G FG V + +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 213 LGCCIQ-GEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C G L LI E++P SL ++ Q+ + +D K
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--------------QKHKERIDHIKLLQYTSQ 140
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R IHRDL N
Sbjct: 141 ICKGMEYL---GTKRYIHRDLATRN 162
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 37/153 (24%)
Query: 158 DNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQHR 207
+NF K+GEG +G+VYK +A+K RL +E E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 208 NLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILDWS 262
N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ--------- 111
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 112 --------LLQGLAFCHSH---RVLHRDLKPQN 133
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 165 KLGEGGFGLVY------------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 212
+LG+G FG V + +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 213 LGCCIQ-GEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C G L LI E++P SL ++ Q+ + +D K
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--------------QKHKERIDHIKLLQYTSQ 140
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R IHRDL N
Sbjct: 141 ICKGMEYL---GTKRYIHRDLATRN 162
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 37/155 (23%)
Query: 156 ATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQ 205
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 206 HRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILD 260
H N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 65 HPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 115
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 116 ----------LLQGLAFCHSH---RVLHRDLKPQN 137
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 35/154 (22%)
Query: 156 ATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQ 205
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 206 HRNLVKLLGCCIQGEEKL-LIYEFMP---NKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
H N+VKLL I E KL L++EF+ K +++ L L++S++ Q
Sbjct: 64 HPNIVKLLD-VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQ-------- 114
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 115 ---------LLQGLAFCHSH---RVLHRDLKPEN 136
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 37/155 (23%)
Query: 156 ATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQ 205
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 206 HRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILD 260
H N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 111
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 112 ----------LLQGLAFCHSH---RVLHRDLKPQN 133
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 37/155 (23%)
Query: 156 ATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQ 205
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 206 HRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILD 260
H N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 111
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 112 ----------LLQGLAFCHSH---RVLHRDLKPQN 133
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 37/155 (23%)
Query: 156 ATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQ 205
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 206 HRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILD 260
H N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 62 HPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 112
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 113 ----------LLQGLAFCHSH---RVLHRDLKPEN 134
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 37/155 (23%)
Query: 156 ATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQ 205
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 206 HRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILD 260
H N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQ------- 111
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 112 ----------LLQGLAFCHSH---RVLHRDLKPEN 133
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 37/153 (24%)
Query: 158 DNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQHR 207
+NF K+GEG +G+VYK +A+K RL +E E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 208 NLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILDWS 262
N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ--------- 111
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 112 --------LLQGLAFCHSH---RVLHRDLKPQN 133
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 37/153 (24%)
Query: 158 DNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQHR 207
+NF K+GEG +G+VYK +A+K RL +E E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 208 NLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILDWS 262
N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ--------- 110
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 111 --------LLQGLAFCHSH---RVLHRDLKPQN 132
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 37/155 (23%)
Query: 156 ATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQ 205
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 206 HRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILD 260
H N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 62 HPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 112
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 113 ----------LLQGLAFCHSH---RVLHRDLKPQN 134
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 37/155 (23%)
Query: 156 ATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQ 205
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 206 HRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILD 260
H N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 111
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 112 ----------LLQGLAFCHSH---RVLHRDLKPQN 133
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 35/154 (22%)
Query: 156 ATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQ 205
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 206 HRNLVKLLGCCIQGEEKL-LIYEFMP---NKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
H N+VKLL I E KL L++EF+ K +++ L L++S++ Q
Sbjct: 62 HPNIVKLLD-VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQ-------- 112
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 113 ---------LLQGLAFCHSH---RVLHRDLKPEN 134
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 37/153 (24%)
Query: 158 DNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQHR 207
+NF K+GEG +G+VYK +A+K RL +E E+ L +L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 208 NLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILDWS 262
N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 67 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ--------- 115
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 116 --------LLQGLAFCHSH---RVLHRDLKPQN 137
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 37/153 (24%)
Query: 158 DNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQHR 207
+NF K+GEG +G+VYK +A+K RL +E E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 208 NLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILDWS 262
N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ--------- 110
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 111 --------LLQGLAFCHSH---RVLHRDLKPQN 132
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 37/153 (24%)
Query: 158 DNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQHR 207
+NF K+GEG +G+VYK +A+K RL +E E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 208 NLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILDWS 262
N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ--------- 110
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 111 --------LLQGLAFCHSH---RVLHRDLKPQN 132
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 37/155 (23%)
Query: 156 ATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQ 205
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 206 HRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILD 260
H N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 111
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 112 ----------LLQGLAFCHSH---RVLHRDLKPQN 133
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 37/153 (24%)
Query: 158 DNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQHR 207
+NF K+GEG +G+VYK +A+K RL +E E+ L +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 208 NLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILDWS 262
N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 70 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ--------- 118
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 119 --------LLQGLAFCHSH---RVLHRDLKPQN 140
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 37/153 (24%)
Query: 158 DNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQHR 207
+NF K+GEG +G+VYK +A+K RL +E E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 208 NLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILDWS 262
N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ--------- 110
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 111 --------LLQGLAFCHSH---RVLHRDLKPQN 132
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 23/153 (15%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLKE-LKNEVILFSK 203
+N LG G FG V + ++AVK L + KE L +E+ + S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 204 L-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWS 262
L QH N+V LLG C G L+I E+ L NF+ + +D+E + L+
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDL-----LNFLRRKAEADLDKEDGRPLELR 160
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H A+G+ +L + IHRD+ A N
Sbjct: 161 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARN 190
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 23/153 (15%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLKE-LKNEVILFSK 203
+N LG G FG V + ++AVK L + KE L +E+ + S
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 204 L-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWS 262
L QH N+V LLG C G L+I E+ L NF+ + +D+E + L+
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDL-----LNFLRRKAEADLDKEDGRPLELR 152
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H A+G+ +L + IHRD+ A N
Sbjct: 153 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARN 182
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 37/153 (24%)
Query: 158 DNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQHR 207
+NF K+GEG +G+VYK +A+K RL +E E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 208 NLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILDWS 262
N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ--------- 111
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 112 --------LLQGLAFCHSH---RVLHRDLKPQN 133
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 37/153 (24%)
Query: 158 DNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQHR 207
+NF K+GEG +G+VYK +A+K RL +E E+ L +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 208 NLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILDWS 262
N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 64 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ--------- 112
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 113 --------LLQGLAFCHSH---RVLHRDLKPQN 134
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 37/153 (24%)
Query: 158 DNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQHR 207
+NF K+GEG +G+VYK +A+K RL +E E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 208 NLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILDWS 262
N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ--------- 111
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 112 --------LLQGLSFCHSH---RVLHRDLKPQN 133
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 26/160 (16%)
Query: 159 NFSINNKLGEGGFGLV-------------YKEIAVKRLSK-ISEQGLKELKNEVILFSKL 204
N + LGEG FG V Y +AVK L + S L++L +E + ++
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFEN---------FVLTLMRSFVDQER 255
H +++KL G C Q LLI E+ SL F+ E+ + S +D
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 256 CKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ L ++G+ YL ++++++HRDL A N
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARN 180
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLV---------YKEI--AVKRLS-KISEQGLKEL 194
+ E A +AT N SI+ +G G FG V KEI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 195 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQE 254
E + + H N+++L G + + +++ E+M N SL+SF+ ++ + V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
R G A G+ YL S + +HRDL A N
Sbjct: 154 R--------------GIASGMKYL---SDMGFVHRDLAARN 177
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 26/160 (16%)
Query: 159 NFSINNKLGEGGFGLV-------------YKEIAVKRLSK-ISEQGLKELKNEVILFSKL 204
N + LGEG FG V Y +AVK L + S L++L +E + ++
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFEN---------FVLTLMRSFVDQER 255
H +++KL G C Q LLI E+ SL F+ E+ + S +D
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 256 CKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ L ++G+ YL ++++++HRDL A N
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARN 180
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLV---------YKEI--AVKRLS-KISEQGLKEL 194
+ E A +AT N SI+ +G G FG V KEI A+K L +E+ ++
Sbjct: 6 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 195 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQE 254
E + + H N+++L G + + +++ E+M N SL+SF+ ++ + V
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
R G A G+ YL S + +HRDL A N
Sbjct: 125 R--------------GIASGMKYL---SDMGYVHRDLAARN 148
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLV---------YKEI--AVKRLS-KISEQGLKEL 194
+ E A +AT N SI+ +G G FG V KEI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 195 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQE 254
E + + H N+++L G + + +++ E+M N SL+SF+ ++ + V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
R G A G+ YL S + +HRDL A N
Sbjct: 154 R--------------GIASGMKYL---SDMGYVHRDLAARN 177
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLV---------YKEI--AVKRLS-KISEQGLKEL 194
+ E A +AT N SI+ +G G FG V KEI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 195 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQE 254
E + + H N+++L G + + +++ E+M N SL+SF+ ++ + V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
R G A G+ YL S + +HRDL A N
Sbjct: 154 R--------------GIASGMKYL---SDMGYVHRDLAARN 177
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLV---------YKEI--AVKRLS-KISEQGLKEL 194
+ E A +AT N SI+ +G G FG V KEI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 195 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQE 254
E + + H N+++L G + + +++ E+M N SL+SF+ ++ + V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
R G A G+ YL S + +HRDL A N
Sbjct: 154 R--------------GIASGMKYL---SDMGYVHRDLAARN 177
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLV---------YKEI--AVKRLS-KISEQGLKEL 194
+ E A +AT N SI+ +G G FG V KEI A+K L +E+ ++
Sbjct: 33 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 91
Query: 195 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQE 254
E + + H N+++L G + + +++ E+M N SL+SF+ ++ + V
Sbjct: 92 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 151
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
R G A G+ YL S + +HRDL A N
Sbjct: 152 R--------------GIASGMKYL---SDMGYVHRDLAARN 175
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLV---------YKEI--AVKRLS-KISEQGLKEL 194
+ E A +AT N SI+ +G G FG V KEI A+K L +E+ ++
Sbjct: 23 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 81
Query: 195 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQE 254
E + + H N+++L G + + +++ E+M N SL+SF+ ++ + V
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 141
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
R G A G+ YL S + +HRDL A N
Sbjct: 142 R--------------GIASGMKYL---SDMGYVHRDLAARN 165
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLV---------YKEI--AVKRLS-KISEQGLKEL 194
+ E A +AT N SI+ +G G FG V KEI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 195 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQE 254
E + + H N+++L G + + +++ E+M N SL+SF+ ++ + V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
R G A G+ YL S + +HRDL A N
Sbjct: 154 R--------------GIASGMKYL---SDMGYVHRDLAARN 177
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLV---------YKEI--AVKRLS-KISEQGLKEL 194
+ E A +AT N SI+ +G G FG V KEI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 195 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQE 254
E + + H N+++L G + + +++ E+M N SL+SF+ ++ + V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
R G A G+ YL S + +HRDL A N
Sbjct: 154 R--------------GIASGMKYL---SDMGYVHRDLAARN 177
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 27/150 (18%)
Query: 155 NATDNFSINNKLGEGGFGLVYKE--------IAVKRLSKISEQGLKELKNEVILFSKLQH 206
+ + + I +LG+G FG VYK A K + SE+ L++ E+ + + H
Sbjct: 8 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDH 67
Query: 207 RNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFH 266
+VKLLG + ++ EF P ++++ + E L R + +
Sbjct: 68 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE-----LDRGLTEPQ----------IQ 112
Query: 267 IIC-GTARGVMYLHQDSKLRIIHRDLKASN 295
++C + +LH RIIHRDLKA N
Sbjct: 113 VVCRQMLEALNFLHSK---RIIHRDLKAGN 139
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLV---------YKEI--AVKRLS-KISEQGLKEL 194
+ E A +AT N SI+ +G G FG V KEI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 195 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQE 254
E + + H N+++L G + + +++ E+M N SL+SF+ ++ + V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
R G A G+ YL S + +HRDL A N
Sbjct: 154 R--------------GIASGMKYL---SDMGYVHRDLAARN 177
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 27/150 (18%)
Query: 155 NATDNFSINNKLGEGGFGLVYKE--------IAVKRLSKISEQGLKELKNEVILFSKLQH 206
+ + + I +LG+G FG VYK A K + SE+ L++ E+ + + H
Sbjct: 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDH 75
Query: 207 RNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFH 266
+VKLLG + ++ EF P ++++ + E L R + +
Sbjct: 76 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE-----LDRGLTEPQ----------IQ 120
Query: 267 IIC-GTARGVMYLHQDSKLRIIHRDLKASN 295
++C + +LH RIIHRDLKA N
Sbjct: 121 VVCRQMLEALNFLHSK---RIIHRDLKAGN 147
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 37/155 (23%)
Query: 156 ATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQ 205
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 206 HRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILD 260
H N+VKLL I E KL L++EF+ + L F+ L L++S++ Q
Sbjct: 63 HPNIVKLLD-VIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQ------- 113
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 114 ----------LLQGLAFCHSH---RVLHRDLKPQN 135
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 37/155 (23%)
Query: 156 ATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQ 205
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 206 HRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILD 260
H N+VKLL I E KL L++EF+ + L F+ L L++S++ Q
Sbjct: 64 HPNIVKLLD-VIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQ------- 114
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 115 ----------LLQGLAFCHSH---RVLHRDLKPQN 136
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLKE-LKNEVILFSK 203
+N LG G FG V + ++AVK L + KE L +E+ + S
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 204 L-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSF--------VDQE 254
L QH N+V LLG C G L+I E+ L +F+ L S +D+E
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ L+ H A+G+ +L + IHRD+ A N
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARN 188
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 33/157 (21%)
Query: 151 ATIANATDNFSINNKLGEGGFGLVYKEI--------AVKRLS-KISEQGLKELK-NEVIL 200
A A + D + KLGEG +G VYK I A+KR+ + E+G+ EV L
Sbjct: 27 APSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSL 86
Query: 201 FSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFEN--FVLTLMRSFVDQERCKI 258
+LQHRN+++L LI+E+ N L ++ +N + +++SF+ Q
Sbjct: 87 LKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQ----- 140
Query: 259 LDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
GV + H R +HRDLK N
Sbjct: 141 ------------LINGVNFCHSR---RCLHRDLKPQN 162
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 165 KLGEGGFGLVY------------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKL 212
+LG+G FG V + +AVK+L +E+ L++ + E+ + LQH N+VK
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 213 LGCCIQ-GEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C G L LI E++P SL ++ Q+ + +D K
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--------------QKHKERIDHIKLLQYTSQ 123
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R IHR+L N
Sbjct: 124 ICKGMEYL---GTKRYIHRNLATRN 145
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 26/160 (16%)
Query: 159 NFSINNKLGEGGFGLV-------------YKEIAVKRLSK-ISEQGLKELKNEVILFSKL 204
N + LGEG FG V Y +AVK L + S L++L +E + ++
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFEN---------FVLTLMRSFVDQER 255
H +++KL G C Q LLI E+ SL F+ E+ + S +D
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 256 CKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ L ++G+ YL +++ ++HRDL A N
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARN 180
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 165 KLGEGGFGLVYKE-------IAVKRLSKISE-QGLKELK-NEVILFSKLQHRNLVKLLGC 215
K+GEG +G+VYK +A+KR+ +E +G+ E+ L +L H N+V L+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGV 275
L++EFM K L + EN ++ + + KI + RGV
Sbjct: 88 IHSERCLTLVFEFM-EKDLKKVLDEN------KTGLQDSQIKIY--------LYQLLRGV 132
Query: 276 MYLHQDSKLRIIHRDLKASN 295
+ HQ RI+HRDLK N
Sbjct: 133 AHCHQH---RILHRDLKPQN 149
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGV 275
F P K+L F V+ LM + + Q LD + +++ G+
Sbjct: 92 ------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 139
Query: 276 MYLHQDSKLRIIHRDLKASN 295
+LH IIHRDLK SN
Sbjct: 140 KHLHSAG---IIHRDLKPSN 156
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 165 KLGEGGFGLVYKE-------IAVKRLSKISE-QGLKELK-NEVILFSKLQHRNLVKLLGC 215
K+GEG +G+VYK +A+KR+ +E +G+ E+ L +L H N+V L+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGV 275
L++EFM K L + EN ++ + + KI + RGV
Sbjct: 88 IHSERCLTLVFEFM-EKDLKKVLDEN------KTGLQDSQIKIY--------LYQLLRGV 132
Query: 276 MYLHQDSKLRIIHRDLKASN 295
+ HQ RI+HRDLK N
Sbjct: 133 AHCHQH---RILHRDLKPQN 149
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 166 LGEGGFGLVY--------KEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGV 275
F P KSL F V+ LM + + Q LD + +++ G+
Sbjct: 92 ------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 276 MYLHQDSKLRIIHRDLKASN 295
+LH IIHRDLK SN
Sbjct: 140 KHLHSAG---IIHRDLKPSN 156
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 37/153 (24%)
Query: 158 DNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQHR 207
+NF K+GEG +G+VYK +A+ RL +E E+ L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 208 NLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILDWS 262
N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ--------- 111
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 112 --------LLQGLAFCHSH---RVLHRDLKPQN 133
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 37/153 (24%)
Query: 158 DNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQHR 207
+NF K+GEG +G+VYK +A+ RL +E E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 208 NLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILDWS 262
N+VKLL I E KL L++EF+ ++ L F+ L L++S++ Q
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ--------- 110
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 111 --------LLQGLAFCHSH---RVLHRDLKPQN 132
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGV 275
F P KSL F V+ LM + + Q LD + +++ G+
Sbjct: 92 ------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 276 MYLHQDSKLRIIHRDLKASN 295
+LH IIHRDLK SN
Sbjct: 140 KHLHSAG---IIHRDLKPSN 156
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 22/142 (15%)
Query: 160 FSINNKLGEGGFGLV------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLL 213
+ +G G FG+V K++A+K++ SE+ K E+ S++ H N+VKL
Sbjct: 11 IEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLY 68
Query: 214 GCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTAR 273
G C+ L+ E+ SL + + L + C + C ++
Sbjct: 69 GACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC----------LQC--SQ 114
Query: 274 GVMYLHQDSKLRIIHRDLKASN 295
GV YLH +IHRDLK N
Sbjct: 115 GVAYLHSMQPKALIHRDLKPPN 136
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGV 275
F P KSL F V+ LM + + Q LD + +++ G+
Sbjct: 92 ------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 276 MYLHQDSKLRIIHRDLKASN 295
+LH IIHRDLK SN
Sbjct: 140 KHLHSAG---IIHRDLKPSN 156
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 37/153 (24%)
Query: 158 DNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSKLQHR 207
+NF K+GEG +G+VYK +A+K RL +E E+ L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 208 NLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKILDWS 262
N+VKLL I E KL L++E + ++ L +F+ L L++S++ Q
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQ--------- 110
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 111 --------LLQGLAFCHSH---RVLHRDLKPQN 132
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 30/161 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLV---------YKEI--AVKRLS-KISEQGLKEL 194
+ E A +AT N SI+ +G G FG V KEI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 195 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQE 254
E + + H N+++L G + + +++ E M N SL+SF+ ++ + V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
R G A G+ YL S + +HRDL A N
Sbjct: 154 R--------------GIASGMKYL---SDMGAVHRDLAARN 177
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 30/161 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLV---------YKEI--AVKRLS-KISEQGLKEL 194
+ E A +AT N SI+ +G G FG V KEI A+K L +E+ ++
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 195 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQE 254
E + + H N+++L G + + +++ E M N SL+SF+ ++ + V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
R G A G+ YL S + +HRDL A N
Sbjct: 154 R--------------GIASGMKYL---SDMGYVHRDLAARN 177
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 22/142 (15%)
Query: 160 FSINNKLGEGGFGLV------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLL 213
+ +G G FG+V K++A+K++ SE+ K E+ S++ H N+VKL
Sbjct: 10 IEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLY 67
Query: 214 GCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTAR 273
G C+ L+ E+ SL + VL + W + ++
Sbjct: 68 GACLN--PVCLVMEYAEGGSLYN------VLHGAEPLPYYTAAHAMSWCLQ------CSQ 113
Query: 274 GVMYLHQDSKLRIIHRDLKASN 295
GV YLH +IHRDLK N
Sbjct: 114 GVAYLHSMQPKALIHRDLKPPN 135
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 30/161 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLV---------YKEI--AVKRLS-KISEQGLKEL 194
+ E A +AT N SI+ +G G FG V KEI A+K L +E+ ++
Sbjct: 6 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 195 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQE 254
E + + H N+++L G + + +++ E M N SL+SF+ ++ + V
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
R G A G+ YL S + +HRDL A N
Sbjct: 125 R--------------GIASGMKYL---SDMGYVHRDLAARN 148
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G FG VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVSAVV----LLYMATQ 117
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 118 ISSAMEYLE---KKNFIHRDLAARN 139
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 29/158 (18%)
Query: 150 LAT-IANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSK--ISEQGL-KELKNE 197
LAT I ++F + N LG+G F VY+ E+A+K + K + + G+ + ++NE
Sbjct: 2 LATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNE 61
Query: 198 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCK 257
V + +L+H ++++L L+ E N +N ++ + R K
Sbjct: 62 VKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL--------------KNRVK 107
Query: 258 ILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
++ H + G++YLH I+HRDL SN
Sbjct: 108 PFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSN 142
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 37/157 (23%)
Query: 154 ANATDNFSINNKLGEGGFGLVYKE--------IAVK--RLSKISEQGLKELKNEVILFSK 203
+ +NF K+GEG +G+VYK +A+K RL +E E+ L +
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 204 LQHRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFI----FENFVLTLMRSFVDQERCKI 258
L H N+VKLL I E KL L++E + ++ L F+ L L++S++ Q
Sbjct: 62 LNHPNIVKLLD-VIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQ----- 114
Query: 259 LDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H R++HRDLK N
Sbjct: 115 ------------LLQGLAFCHSH---RVLHRDLKPQN 136
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVSAVV----LLYMATQ 124
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 125 ISSAMEYLE---KKNFIHRDLAARN 146
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGV 275
F P KSL F V+ LM + + Q LD + +++ G+
Sbjct: 92 ------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 276 MYLHQDSKLRIIHRDLKASN 295
+LH IIHRDLK SN
Sbjct: 140 KHLHSAG---IIHRDLKPSN 156
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNL---------LDYLRECNRQEVSAVV----LLYMATQ 117
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 118 ISSAMEYL---EKKNFIHRDLAARN 139
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNL---------LDYLRECNRQEVSAVV----LLYMATQ 119
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 120 ISSAMEYL---EKKNFIHRDLAARN 141
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 28/149 (18%)
Query: 157 TDNFSINNKLGEGGFGLVYK--------EIAVKRLS--KISEQGLKELKNEVILFSKLQH 206
+DN+ + +LG+G F +V + E A K ++ K+S + ++L+ E + KLQH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 207 RNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFH 266
N+V+L + L+++ + L FE+ V S D C
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHC---------- 109
Query: 267 IICGTARGVMYLHQDSKLRIIHRDLKASN 295
I + Y H + I+HR+LK N
Sbjct: 110 -IQQILESIAYCHSNG---IVHRNLKPEN 134
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 28/149 (18%)
Query: 157 TDNFSINNKLGEGGFGLVYK--------EIAVKRLS--KISEQGLKELKNEVILFSKLQH 206
+DN+ + +LG+G F +V + E A K ++ K+S + ++L+ E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 207 RNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFH 266
N+V+L + L+++ + L FE+ V S D C
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHC---------- 110
Query: 267 IICGTARGVMYLHQDSKLRIIHRDLKASN 295
I + Y H + I+HR+LK N
Sbjct: 111 -IQQILESIAYCHSNG---IVHRNLKPEN 135
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVSAVV----LLYMATQ 119
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 120 ISSAMEYL---EKKNFIHRDLAARN 141
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 27/144 (18%)
Query: 160 FSINNKLGEGGFGLVYKEI--------AVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 211
F + KLGEG +G VYK I A+K++ E L+E+ E+ + + ++VK
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP--VESDLQEIIKEISIMQQCDSPHVVK 88
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGT 271
G + + ++ E+ S++ I + R K L + I+ T
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDII--------------RLRNKTLTEDEIATILQST 134
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YLH +R IHRD+KA N
Sbjct: 135 LKGLEYLH---FMRKIHRDIKAGN 155
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 28/149 (18%)
Query: 157 TDNFSINNKLGEGGFGLVYK--------EIAVKRLS--KISEQGLKELKNEVILFSKLQH 206
+DN+ + +LG+G F +V + E A K ++ K+S + ++L+ E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 207 RNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFH 266
N+V+L + L+++ + L FE+ V S D C
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHC---------- 110
Query: 267 IICGTARGVMYLHQDSKLRIIHRDLKASN 295
I + Y H + I+HR+LK N
Sbjct: 111 -IQQILESIAYCHSNG---IVHRNLKPEN 135
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNL---------LDYLRECNRQEVSAVV----LLYMATQ 119
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 120 ISSAMEYL---EKKNFIHRDLAARN 141
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGV 275
F P K+L F V+ LM + + Q LD + +++ G+
Sbjct: 92 ------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 139
Query: 276 MYLHQDSKLRIIHRDLKASN 295
+LH IIHRDLK SN
Sbjct: 140 KHLHSAG---IIHRDLKPSN 156
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVSAVV----LLYMATQ 119
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 120 ISSAMEYL---EKKNFIHRDLAARN 141
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVSAVV----LLYMATQ 117
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 118 ISSAMEYLE---KKNFIHRDLAARN 139
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY---------------KEIAVKRL-SKISEQGLKELKNEVILF 201
D + LGEG FG V ++AVK L S +E+ L +L +E+ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I E+ +L ++ L SF +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
SK + C ARG+ YL + + IHRDL A N
Sbjct: 148 SSKDL-VSCAYQVARGMEYL---ASKKCIHRDLAARN 180
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGV 275
F P K+L F V+ LM + + Q LD + +++ G+
Sbjct: 85 ------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 132
Query: 276 MYLHQDSKLRIIHRDLKASN 295
+LH IIHRDLK SN
Sbjct: 133 KHLHSAG---IIHRDLKPSN 149
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 28/149 (18%)
Query: 157 TDNFSINNKLGEGGFGLVYK--------EIAVKRLS--KISEQGLKELKNEVILFSKLQH 206
+DN+ + +LG+G F +V + E A K ++ K+S + ++L+ E + KLQH
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 207 RNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFH 266
N+V+L + L+++ + L FE+ V S D C
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHC---------- 133
Query: 267 IICGTARGVMYLHQDSKLRIIHRDLKASN 295
I + Y H + I+HR+LK N
Sbjct: 134 -IQQILESIAYCHSNG---IVHRNLKPEN 158
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGV 275
F P K+L F V+ LM + + Q LD + +++ G+
Sbjct: 92 ------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGI 139
Query: 276 MYLHQDSKLRIIHRDLKASN 295
+LH IIHRDLK SN
Sbjct: 140 KHLHSAG---IIHRDLKPSN 156
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 76
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVNAVV----LLYMATQ 123
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 124 ISSAMEYL---EKKNFIHRDLAARN 145
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVNAVV----LLYMATQ 124
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 125 ISSAMEYL---EKKNFIHRDLAARN 146
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 78 QLLGVCTREPPFYIIIEFMTYGNL---------LDYLRECNRQEVNAVV----LLYMATQ 124
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 125 ISSAMEYL---EKKNFIHRDLAARN 146
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 24/145 (16%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG G FG V+ ++AVK L K ++ E L LQH LV
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLV 70
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E +I EFM SL F+ + ++ K++D+S +
Sbjct: 71 RLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP-------KLIDFSAQI----- 118
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ + + IHRDL+A+N
Sbjct: 119 -AEGMAYIERKN---YIHRDLRAAN 139
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVNAVV----LLYMATQ 124
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 125 ISSAMEYL---EKKNFIHRDLAARN 146
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVNAVV----LLYMATQ 124
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 125 ISSAMEYL---EKKNFIHRDLAARN 146
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 140 NMDLELP-LFELATIANATDNFSINNKLGEGGFGLVY--------KEIAVKRLSK--ISE 188
N+ + P +F + A +D + LG+G FG V +E AVK +SK + +
Sbjct: 13 NLYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ 72
Query: 189 QGLKE-LKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVL-TL 246
+ KE L EV L +L H N++KL YEF +K + E + L
Sbjct: 73 KTDKESLLREVQLLKQLDHPNIMKL-------------YEFFEDKGYFYLVGEVYTGGEL 119
Query: 247 MRSFVDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ ++R +D ++ II G+ Y+H++ +I+HRDLK N
Sbjct: 120 FDEIISRKRFSEVDAAR---IIRQVLSGITYMHKN---KIVHRDLKPEN 162
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 28/171 (16%)
Query: 144 ELPLFELATIANATDNFSINNKLGEGGFGLVY---------------KEIAVKRL-SKIS 187
E P +EL D + LGEG FG V ++AVK L S +
Sbjct: 11 EDPRWELPR-----DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 65
Query: 188 EQGLKELKNEVILFSKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
E+ L +L +E+ + + +H+N++ LLG C Q +I E+ +L ++ L
Sbjct: 66 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 125
Query: 247 MRSFVDQERCKILDWSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
S+ + SK + C ARG+ YL + + IHRDL A N
Sbjct: 126 EYSYNPSHNPEEQLSSKDL-VSCAYQVARGMEYL---ASKKCIHRDLAARN 172
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVNAVV----LLYMATQ 121
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 122 ISSAMEYL---EKKNFIHRDLAARN 143
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 31/161 (19%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLVY--------KEIAVKRLSK--ISEQGLKE-LK 195
+F + A +D + LG+G FG V +E AVK +SK + ++ KE L
Sbjct: 39 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 98
Query: 196 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVL-TLMRSFVDQE 254
EV L +L H N++KL YEF +K + E + L + ++
Sbjct: 99 REVQLLKQLDHPNIMKL-------------YEFFEDKGYFYLVGEVYTGGELFDEIISRK 145
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
R +D ++ II G+ Y+H++ +I+HRDLK N
Sbjct: 146 RFSEVDAAR---IIRQVLSGITYMHKN---KIVHRDLKPEN 180
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 28/171 (16%)
Query: 144 ELPLFELATIANATDNFSINNKLGEGGFGLVY---------------KEIAVKRL-SKIS 187
E P +EL D + LGEG FG V ++AVK L S +
Sbjct: 19 EDPRWELPR-----DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 73
Query: 188 EQGLKELKNEVILFSKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
E+ L +L +E+ + + +H+N++ LLG C Q +I E+ +L ++ L
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 133
Query: 247 MRSFVDQERCKILDWSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
S+ + SK + C ARG+ YL + + IHRDL A N
Sbjct: 134 EYSYNPSHNPEEQLSSKDL-VSCAYQVARGMEYL---ASKKCIHRDLAARN 180
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 31/161 (19%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLVY--------KEIAVKRLSK--ISEQGLKE-LK 195
+F + A +D + LG+G FG V +E AVK +SK + ++ KE L
Sbjct: 38 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 97
Query: 196 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVL-TLMRSFVDQE 254
EV L +L H N++KL YEF +K + E + L + ++
Sbjct: 98 REVQLLKQLDHPNIMKL-------------YEFFEDKGYFYLVGEVYTGGELFDEIISRK 144
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
R +D ++ II G+ Y+H++ +I+HRDLK N
Sbjct: 145 RFSEVDAAR---IIRQVLSGITYMHKN---KIVHRDLKPEN 179
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 28/171 (16%)
Query: 144 ELPLFELATIANATDNFSINNKLGEGGFGLVY---------------KEIAVKRL-SKIS 187
E P +EL D + LGEG FG V ++AVK L S +
Sbjct: 8 EDPRWELPR-----DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 62
Query: 188 EQGLKELKNEVILFSKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
E+ L +L +E+ + + +H+N++ LLG C Q +I E+ +L ++ L
Sbjct: 63 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 122
Query: 247 MRSFVDQERCKILDWSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
S+ + SK + C ARG+ YL + + IHRDL A N
Sbjct: 123 EYSYNPSHNPEEQLSSKDL-VSCAYQVARGMEYL---ASKKCIHRDLAARN 169
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 74 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVNAVV----LLYMATQ 120
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 121 ISSAMEYLE---KKNFIHRDLAARN 142
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY---------------KEIAVKRL-SKISEQGLKELKNEVILF 201
D + LGEG FG V ++AVK L S +E+ L +L +E+ +
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I E+ +L ++ L S+ +
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
SK + C ARG+ YL + + IHRDL A N
Sbjct: 141 SSKDL-VSCAYQVARGMEYL---ASKKCIHRDLAARN 173
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 31/161 (19%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLVY--------KEIAVKRLSK--ISEQGLKE-LK 195
+F + A +D + LG+G FG V +E AVK +SK + ++ KE L
Sbjct: 15 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 196 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVL-TLMRSFVDQE 254
EV L +L H N++KL YEF +K + E + L + ++
Sbjct: 75 REVQLLKQLDHPNIMKL-------------YEFFEDKGYFYLVGEVYTGGELFDEIISRK 121
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
R +D ++ II G+ Y+H++ +I+HRDLK N
Sbjct: 122 RFSEVDAAR---IIRQVLSGITYMHKN---KIVHRDLKPEN 156
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY---------------KEIAVKRL-SKISEQGLKELKNEVILF 201
D + LGEG FG V ++AVK L S +E+ L +L +E+ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I E+ +L ++ L S+ +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
SK + C ARG+ YL + + IHRDL A N
Sbjct: 148 SSKDL-VSCAYQVARGMEYL---ASKKCIHRDLAARN 180
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGV 275
F P KSL F V+ LM + + Q LD + +++ G+
Sbjct: 92 ------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 276 MYLHQDSKLRIIHRDLKASN 295
+LH IIHRDLK SN
Sbjct: 140 KHLHSAG---IIHRDLKPSN 156
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVNAVV----LLYMATQ 121
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 122 ISSAMEYL---EKKNFIHRDLAARN 143
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVNAVV----LLYMATQ 121
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 122 ISSAMEYL---EKKNFIHRDLAARN 143
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 74 QLLGVCTREPPFYIIIEFMTYGNL---------LDYLRECNRQEVNAVV----LLYMATQ 120
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 121 ISSAMEYL---EKKNFIHRDLAARN 142
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVNAVV----LLYMATQ 119
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 120 ISSAMEYL---EKKNFIHRDLAARN 141
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGV 275
F P KSL F V+ LM + + Q LD + +++ G+
Sbjct: 92 ------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 276 MYLHQDSKLRIIHRDLKASN 295
+LH IIHRDLK SN
Sbjct: 140 KHLHSAG---IIHRDLKPSN 156
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVNAVV----LLYMATQ 119
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 120 ISSAMEYL---EKKNFIHRDLAARN 141
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY---------------KEIAVKRL-SKISEQGLKELKNEVILF 201
D + LGEG FG V ++AVK L S +E+ L +L +E+ +
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I E+ +L ++ L S+ +
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
SK + C ARG+ YL + + IHRDL A N
Sbjct: 189 SSKDL-VSCAYQVARGMEYL---ASKKCIHRDLAARN 221
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 27 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 85
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 86 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVNAVV----LLYMATQ 132
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 133 ISSAMEYL---EKKNFIHRDLAARN 154
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 29/146 (19%)
Query: 162 INNKLGEGGFGLV---------YKEI--AVKRL-SKISEQGLKELKNEVILFSKLQHRNL 209
I +G G FG V +EI A+K L S +E+ ++ +E + + H N+
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
+ L G + ++I EFM N SL+SF+ +N D + I + ++
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQN----------DGQFTVI----QLVGMLR 142
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
G A G+ YL + + +HRDL A N
Sbjct: 143 GIAAGMKYL---ADMNYVHRDLAARN 165
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P + + + ++ D +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEV---------------YKELQKLSKFDEQRT 115
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 116 ATYITELANALSYCHSK---RVIHRDIKPEN 143
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 136
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 137 ATYITELANALSYCHSK---RVIHRDIKPEN 164
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY +AVK L + + + ++E E + +++H NLV
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 91
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C ++ E+MP +L L +R +E ++ ++
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNL---------LDYLRECNREEVTAVV----LLYMATQ 138
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHRDL A N
Sbjct: 139 ISSAMEYL---EKKNFIHRDLAARN 160
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P + + + ++ D +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEV---------------YKELQKLSKFDEQRT 115
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 116 ATYITELANALSYCHSK---RVIHRDIKPEN 143
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 136
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 137 ATYITELANALSYCHSK---RVIHRDIKPEN 164
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 39/163 (23%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLKE-LKNEVILFSK 203
+N LG G FG V + ++AVK L + KE L +E+ + S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 204 L-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWS 262
L QH N+V LLG C G L+I E+ L +F+ + + ++L+
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--------------RRKSRVLETD 151
Query: 263 KRFHIICGTARGVMYLHQDSKL----------RIIHRDLKASN 295
F I TA LH S++ IHRD+ A N
Sbjct: 152 PAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 194
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 111
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 112 ATYITELANALSYCHSK---RVIHRDIKPEN 139
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 115
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 116 ATYITELANALSYCHSK---RVIHRDIKPEN 143
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 110
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 111 ATYITELANALSYCHSK---RVIHRDIKPEN 138
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY------------KE---IAVKRL-SKISEQGLKELKNEVILF 201
D ++ LGEG FG V KE +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I E+ +L ++ + S+ D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSY-DINRVPEEQ 153
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
+ + + C ARG+ YL + + IHRDL A N
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARN 187
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 110
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 111 ATYITELANALSYCHSK---RVIHRDIKPEN 138
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY------------KE---IAVKRL-SKISEQGLKELKNEVILF 201
D ++ LGEG FG V KE +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I E+ +L ++ + S+ D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQ 153
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
+ + + C ARG+ YL + + IHRDL A N
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARN 187
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 111
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 112 ATYITELANALSYCHSK---RVIHRDIKPEN 139
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 113
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 114 ATYITELANALSYCHSK---RVIHRDIKPEN 141
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 111
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 112 ATYITELANALSYCHSK---RVIHRDIKPEN 139
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 110
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 111 ATYITELANALSYCHSK---RVIHRDIKPEN 138
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 112
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 113 ATYITELANALSYCHSK---RVIHRDIKPEN 140
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 127
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 128 ATYITELANALSYCHSK---RVIHRDIKPEN 155
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 114
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 115 ATYITELANALSYCHSK---RVIHRDIKPEN 142
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 113
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 114 ATYITELANALSYCHSK---RVIHRDIKPEN 141
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 110
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 111 ATYITELANALSYCHSK---RVIHRDIKPEN 138
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 115
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 116 ATYITELANALSYCHSK---RVIHRDIKPEN 143
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 112
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 113 ATYITELANALSYCHSK---RVIHRDIKPEN 140
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 29/149 (19%)
Query: 158 DNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKLQH 206
D+F I LG+G FG VY +E +A+K L S+I ++G++ +L+ E+ + + L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 207 RNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFH 266
N+++L LI E+ P L + + ++ D +
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGEL---------------YKELQKSCTFDEQRTAT 127
Query: 267 IICGTARGVMYLHQDSKLRIIHRDLKASN 295
I+ A +MY H ++IHRD+K N
Sbjct: 128 IMEELADALMYCHGK---KVIHRDIKPEN 153
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 109
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 110 ATYITELANALSYCHSK---RVIHRDIKPEN 137
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 115
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 116 ATYITELANALSYCHSK---RVIHRDIKPEN 143
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 113
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 114 ATYITELANALSYCHSK---RVIHRDIKPEN 141
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 113
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 114 ATYITELANALSYCHSK---RVIHRDIKPEN 141
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 107
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 108 ATYITELANALSYCHSK---RVIHRDIKPEN 135
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 110
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 111 ATYITELANALSYCHSK---RVIHRDIKPEN 138
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY------------KE---IAVKRL-SKISEQGLKELKNEVILF 201
D ++ LGEG FG V KE +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I E+ +L ++ + S+ D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQ 153
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
+ + + C ARG+ YL + + IHRDL A N
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARN 187
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY------------KE---IAVKRL-SKISEQGLKELKNEVILF 201
D ++ LGEG FG V KE +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I E+ +L ++ + S+ D R
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQ 153
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
+ + + C ARG+ YL + + IHRDL A N
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARN 187
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY------------KE---IAVKRL-SKISEQGLKELKNEVILF 201
D ++ LGEG FG V KE +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I E+ +L ++ + S+ D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQ 153
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
+ + + C ARG+ YL + + IHRDL A N
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARN 187
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 113
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 114 ATYITELANALSYCHSK---RVIHRDIKPEN 141
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY------------KE---IAVKRL-SKISEQGLKELKNEVILF 201
D ++ LGEG FG V KE +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I E+ +L ++ + S+ D R
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQ 153
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
+ + + C ARG+ YL + + IHRDL A N
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARN 187
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 110
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 111 ATYITELANALSYCHSK---RVIHRDIKPEN 138
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 110
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 111 ATYITELANALSYCHSK---RVIHRDIKPEN 138
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY------------KE---IAVKRL-SKISEQGLKELKNEVILF 201
D ++ LGEG FG V KE +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I E+ +L ++ + S+ D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQ 153
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
+ + + C ARG+ YL + + IHRDL A N
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARN 187
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P K+L F V+ LM D C++ LD + +++
Sbjct: 92 ------------FTPQKTLEEFQDVYLVMELM----DANLCQVIQMELDHERMSYLLYQM 135
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSN 156
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 156 ATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELKNEVILFSKL 204
A ++F I LG+G FG VY +E +A+K L +++ + G++ +L+ EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSKFDEQRT 113
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 114 ATYITELANALSYCHSK---RVIHRDIKPEN 141
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 279
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVSAVV----LLYMATQ 326
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHR+L A N
Sbjct: 327 ISSAMEYL---EKKNFIHRNLAARN 348
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 24/151 (15%)
Query: 155 NATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELK-NEVILFSKLQ 205
+++ F KLG G + VYK +A+K + SE+G E+ L +L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 206 HRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
H N+V+L I E KL L++EFM N L ++ V R ++ K W
Sbjct: 62 HENIVRLYD-VIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRG-LELNLVKYFQWQ-- 116
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H++ +I+HRDLK N
Sbjct: 117 ------LLQGLAFCHEN---KILHRDLKPQN 138
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 33/151 (21%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRL---SKISEQGLKELKNEVILFSKLQH 206
+ + I +KLG GG VY ++A+K + + E+ LK + EV S+L H
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 207 RNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRS--FVDQERCKILDWSKR 264
+N+V ++ + + L+ E++ +L+ +I + L++ + F +Q ILD K
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQ----ILDGIKH 126
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H +RI+HRD+K N
Sbjct: 127 AH----------------DMRIVHRDIKPQN 141
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 31/142 (21%)
Query: 166 LGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCI 217
LG+G +G+VY IA+K + + + + L E+ L L+H+N+V+ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 218 QGEEKLLIYEFMPNKSLNSFIFENFVLTLMRS----FVDQERCKILDWSKRFHIICGTAR 273
+ + E +P SL++ L+RS D E+ I ++K+
Sbjct: 76 ENGFIKIFMEQVPGGSLSA---------LLRSKWGPLKDNEQT-IGFYTKQI------LE 119
Query: 274 GVMYLHQDSKLRIIHRDLKASN 295
G+ YLH + +I+HRD+K N
Sbjct: 120 GLKYLHDN---QIVHRDIKGDN 138
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 42/159 (26%)
Query: 158 DNFSINNKLGEGGFGLVYK------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 211
DN + +G G +G VYK +AVK S + Q KN + ++H N+ +
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIAR 71
Query: 212 LLGCCIQGEEK---------LLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWS 262
I G+E+ LL+ E+ PN SL + L+L S DW
Sbjct: 72 F----IVGDERVTADGRMEYLLVMEYYPNGSLXKY------LSLHTS----------DWV 111
Query: 263 KRFHIICGTARGVMYLHQD------SKLRIIHRDLKASN 295
+ RG+ YLH + K I HRDL + N
Sbjct: 112 SSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRN 150
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 31/142 (21%)
Query: 166 LGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCI 217
LG+G +G+VY IA+K + + + + L E+ L L+H+N+V+ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 218 QGEEKLLIYEFMPNKSLNSFIFENFVLTLMRS----FVDQERCKILDWSKRFHIICGTAR 273
+ + E +P SL++ L+RS D E+ I ++K+
Sbjct: 90 ENGFIKIFMEQVPGGSLSA---------LLRSKWGPLKDNEQT-IGFYTKQI------LE 133
Query: 274 GVMYLHQDSKLRIIHRDLKASN 295
G+ YLH + +I+HRD+K N
Sbjct: 134 GLKYLHDN---QIVHRDIKGDN 152
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 163 NNKLGEGGFGLVY---------KEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 210
N +G G FG VY K+I AVK L++I++ G + + E I+ H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 211 KLLGCCIQGE-EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
LLG C++ E L++ +M + L +FI R+ K L
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFI---------RNETHNPTVKDL-----IGFGL 158
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ YL + + +HRDL A N
Sbjct: 159 QVAKGMKYL---ASKKFVHRDLAARN 181
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P KSL F V+ LM D C++ LD + +++
Sbjct: 97 ------------FTPQKSLEEFQDVYIVMELM----DANLCQVIQMELDHERMSYLLYQM 140
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 141 LCGIKHLHSAG---IIHRDLKPSN 161
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P K+L F V+ LM D C++ LD + +++
Sbjct: 130 ------------FTPQKTLEEFQDVYLVMELM----DANLCQVIQMELDHERMSYLLYQM 173
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 174 LCGIKHLHSAG---IIHRDLKPSN 194
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P KSL F V+ LM D C++ LD + +++
Sbjct: 92 ------------FTPQKSLEEFQDVYIVMELM----DANLCQVIQMELDHERMSYLLYQM 135
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSN 156
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P KSL F V+ LM D C++ LD + +++
Sbjct: 92 ------------FTPQKSLEEFQDVYIVMELM----DANLCQVIQMELDHERMSYLLYQM 135
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSN 156
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P KSL F V+ LM D C++ LD + +++
Sbjct: 92 ------------FTPQKSLEEFQDVYIVMELM----DANLCQVIQMELDHERMSYLLYQM 135
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSN 156
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P KSL F V+ LM D C++ LD + +++
Sbjct: 92 ------------FTPQKSLEEFQDVYIVMELM----DANLCQVIQMELDHERMSYLLYQM 135
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSN 156
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P KSL F V+ LM D C++ LD + +++
Sbjct: 86 ------------FTPQKSLEEFQDVYIVMELM----DANLCQVIQMELDHERMSYLLYQM 129
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSN 150
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P KSL F V+ LM D C++ LD + +++
Sbjct: 92 ------------FTPQKSLEEFQDVYIVMELM----DANLCQVIQMELDHERMSYLLYQM 135
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSN 156
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P KSL F V+ LM D C++ LD + +++
Sbjct: 94 ------------FTPQKSLEEFQDVYIVMELM----DANLCQVIQMELDHERMSYLLYQM 137
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 138 LCGIKHLHSAG---IIHRDLKPSN 158
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P KSL F V+ LM D C++ LD + +++
Sbjct: 93 ------------FTPQKSLEEFQDVYIVMELM----DANLCQVIQMELDHERMSYLLYQM 136
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSN 157
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 163 NNKLGEGGFGLVY---------KEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 210
N +G G FG VY K+I AVK L++I++ G + + E I+ H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 211 KLLGCCIQGE-EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
LLG C++ E L++ +M + L +FI R+ K L
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFI---------RNETHNPTVKDL-----IGFGL 159
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ YL + + +HRDL A N
Sbjct: 160 QVAKGMKYL---ASKKFVHRDLAARN 182
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 29/147 (19%)
Query: 160 FSINNKLGEGGFGLVY--------KEIAVKRLS---KISEQGLKELKNEVILFSKLQHRN 208
FS ++G G FG VY + +A+K++S K S + +++ EV KL+H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 209 LVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHII 268
++ GC ++ L+ E+ + S + E V ++ + ++ + H
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSA--SDLLE----------VHKKPLQEVEIAAVTH-- 161
Query: 269 CGTARGVMYLHQDSKLRIIHRDLKASN 295
G +G+ YLH + +IHRD+KA N
Sbjct: 162 -GALQGLAYLHSHN---MIHRDVKAGN 184
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 163 NNKLGEGGFGLVY---------KEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 210
N +G G FG VY K+I AVK L++I++ G + + E I+ H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 211 KLLGCCIQGE-EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
LLG C++ E L++ +M + L +FI R+ K L
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFI---------RNETHNPTVKDL-----IGFGL 137
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ YL + + +HRDL A N
Sbjct: 138 QVAKGMKYL---ASKKFVHRDLAARN 160
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 163 NNKLGEGGFGLVY---------KEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 210
N +G G FG VY K+I AVK L++I++ G + + E I+ H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 211 KLLGCCIQGE-EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
LLG C++ E L++ +M + L +FI R+ K L
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFI---------RNETHNPTVKDL-----IGFGL 132
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ YL + + +HRDL A N
Sbjct: 133 QVAKGMKYL---ASKKFVHRDLAARN 155
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 19/154 (12%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLKE-LKNEVILFSK 203
+N LG G FG V + ++AVK L + KE L +E+ + S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 204 L-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERC-KILDW 261
L QH N+V LLG C G L+I E+ L +F+ L S+ + L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H A+G+ +L + IHRD+ A N
Sbjct: 166 RDLLHFSSQVAQGMAFL---ASKNCIHRDVAARN 196
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 163 NNKLGEGGFGLVY---------KEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 210
N +G G FG VY K+I AVK L++I++ G + + E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 211 KLLGCCIQGE-EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
LLG C++ E L++ +M + L +FI R+ K L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFI---------RNETHNPTVKDL-----IGFGL 140
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ YL + + +HRDL A N
Sbjct: 141 QVAKGMKYL---ASKKFVHRDLAARN 163
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 163 NNKLGEGGFGLVY---------KEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 210
N +G G FG VY K+I AVK L++I++ G + + E I+ H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 211 KLLGCCIQGE-EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
LLG C++ E L++ +M + L +FI R+ K L
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFI---------RNETHNPTVKDL-----IGFGL 135
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ YL + + +HRDL A N
Sbjct: 136 QVAKGMKYL---ASKKFVHRDLAARN 158
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 163 NNKLGEGGFGLVY---------KEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 210
N +G G FG VY K+I AVK L++I++ G + + E I+ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 211 KLLGCCIQGE-EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
LLG C++ E L++ +M + L +FI R+ K L
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFI---------RNETHNPTVKDL-----IGFGL 139
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ YL + + +HRDL A N
Sbjct: 140 QVAKGMKYL---ASKKFVHRDLAARN 162
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 163 NNKLGEGGFGLVY---------KEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 210
N +G G FG VY K+I AVK L++I++ G + + E I+ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 211 KLLGCCIQGE-EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
LLG C++ E L++ +M + L +FI R+ K L
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFI---------RNETHNPTVKDL-----IGFGL 139
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ YL + + +HRDL A N
Sbjct: 140 QVAKGMKYL---ASKKFVHRDLAARN 162
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 45/183 (24%)
Query: 131 MSASEIENRNMDLELPLFELATIANAT----DNFSINNKLGEGGFGLVYK--------EI 178
MS S+++N+ +E +A++T + +G G G+V +
Sbjct: 1 MSKSKVDNQFYSVE--------VADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINV 52
Query: 179 AVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNS 236
AVK+LS+ ++ K E++L + H+N++ LL F P K+L
Sbjct: 53 AVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV------------FTPQKTLEE 100
Query: 237 FIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLK 292
F V+ LM D C++ LD + +++ G+ +LH IIHRDLK
Sbjct: 101 FQDVYLVMELM----DANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLK 153
Query: 293 ASN 295
SN
Sbjct: 154 PSN 156
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 24/145 (16%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + +LG G FG V+ ++AVK L K ++ E L LQH LV
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLV 71
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E +I E+M SL F+ + ++ K++D+S +
Sbjct: 72 RLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP-------KLIDFSAQI----- 119
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ + + IHRDL+A+N
Sbjct: 120 -AEGMAYIERKN---YIHRDLRAAN 140
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 163 NNKLGEGGFGLVY---------KEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 210
N +G G FG VY K+I AVK L++I++ G + + E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 211 KLLGCCIQGE-EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
LLG C++ E L++ +M + L +FI R+ K L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFI---------RNETHNPTVKDL-----IGFGL 140
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ YL + + +HRDL A N
Sbjct: 141 QVAKGMKYL---ASKKFVHRDLAARN 163
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 163 NNKLGEGGFGLVY---------KEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 210
N +G G FG VY K+I AVK L++I++ G + + E I+ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 211 KLLGCCIQGE-EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
LLG C++ E L++ +M + L +FI R+ K L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFI---------RNETHNPTVKDL-----IGFGL 138
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ YL + + +HRDL A N
Sbjct: 139 QVAKGMKYL---ASKKFVHRDLAARN 161
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 33/151 (21%)
Query: 158 DNFSINNKLGEGGFGLVYKEIAVKRLSK------------ISEQGLK-ELKNEVILFSKL 204
++F I LG+G FG VY +A +R SK + + G++ +L+ EV + S L
Sbjct: 12 EDFDIGRPLGKGKFGNVY--LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL 69
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSRFDEQRT 114
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 115 ATYITELANALSYCHSK---RVIHRDIKPEN 142
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 29/147 (19%)
Query: 160 FSINNKLGEGGFGLVY--------KEIAVKRLS---KISEQGLKELKNEVILFSKLQHRN 208
FS ++G G FG VY + +A+K++S K S + +++ EV KL+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 209 LVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHII 268
++ GC ++ L+ E+ + S + E V ++ + ++ + H
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSA--SDLLE----------VHKKPLQEVEIAAVTH-- 122
Query: 269 CGTARGVMYLHQDSKLRIIHRDLKASN 295
G +G+ YLH + +IHRD+KA N
Sbjct: 123 -GALQGLAYLHSHN---MIHRDVKAGN 145
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 27/139 (19%)
Query: 165 KLGEGGFGLV--------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 216
K+GEG G+V K++AVK++ +Q + L NEV++ H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 217 IQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVM 276
+ G+E ++ EF+ +L + + +++E+ + R +
Sbjct: 112 LVGDELWVVMEFLEGGALTDIV--------THTRMNEEQIAT--------VCLSVLRALS 155
Query: 277 YLHQDSKLRIIHRDLKASN 295
YLH +IHRD+K+ +
Sbjct: 156 YLHNQG---VIHRDIKSDS 171
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 33/151 (21%)
Query: 158 DNFSINNKLGEGGFGLVYKEIAVKRLSK------------ISEQGLK-ELKNEVILFSKL 204
++F I LG+G FG VY +A +R SK + + G++ +L+ EV + S L
Sbjct: 12 EDFDIGRPLGKGKFGNVY--LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL 69
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
+H N+++L G LI E+ P L + + ++ D +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAP---------------LGTVYRELQKLSRFDEQRT 114
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I A + Y H R+IHRD+K N
Sbjct: 115 ATYITELANALSYCHSK---RVIHRDIKPEN 142
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 29/150 (19%)
Query: 155 NATDNFSINNKLGEGGFGLVYK----EIAVKRLSKI----SEQGLKELKNEVILFSKLQH 206
N D + I +LG+ FG VYK E +V +K+ SE+ L++ E+ + + H
Sbjct: 9 NPEDFWEIIGELGD--FGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 66
Query: 207 RNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFH 266
N+VKLL ++ EF ++++ + E L R + +
Sbjct: 67 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-----LERPLTESQ----------IQ 111
Query: 267 IICG-TARGVMYLHQDSKLRIIHRDLKASN 295
++C T + YLH + +IIHRDLKA N
Sbjct: 112 VVCKQTLDALNYLHDN---KIIHRDLKAGN 138
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P K+L F V+ LM D C++ LD + +++
Sbjct: 130 ------------FTPQKTLEEFQDVYLVMELM----DANLCQVIQMELDHERMSYLLYQM 173
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 174 LCGIKHLHSAG---IIHRDLKPSN 194
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 29/141 (20%)
Query: 164 NKLGEGGFGLVY-------KEIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 214
++G G FGLV+ ++A+K R +SE+ E + EV++ KL H LV+L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPKLVQLYG 69
Query: 215 CCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARG 274
C++ L++EFM + L+ + L R E + G
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDY------LRTQRGLFAAETL--------LGMCLDVCEG 115
Query: 275 VMYLHQDSKLRIIHRDLKASN 295
+ YL + S +IHRDL A N
Sbjct: 116 MAYLEEAS---VIHRDLAARN 133
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P K+L F V+ LM D C++ LD + +++
Sbjct: 93 ------------FTPQKTLEEFQDVYLVMELM----DANLCQVIQMELDHERMSYLLYQM 136
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSN 157
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P K+L F V+ LM D C++ LD + +++
Sbjct: 92 ------------FTPQKTLEEFQDVYLVMELM----DANLCQVIQMELDHERMSYLLYQM 135
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSN 156
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 90
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P K+L F V+ LM D C++ LD + +++
Sbjct: 91 ------------FTPQKTLEEFQDVYLVMELM----DANLCQVIQMELDHERMSYLLYQM 134
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 135 LCGIKHLHSAG---IIHRDLKPSN 155
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 318
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVNAVV----LLYMATQ 365
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHR+L A N
Sbjct: 366 ISSAMEYL---EKKNFIHRNLAARN 387
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P K+L F V+ LM D C++ LD + +++
Sbjct: 92 ------------FTPQKTLEEFQDVYLVMELM----DANLCQVIQMELDHERMSYLLYQM 135
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSN 156
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P K+L F V+ LM D C++ LD + +++
Sbjct: 93 ------------FTPQKTLEEFQDVYLVMELM----DANLCQVIQMELDHERMSYLLYQM 136
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSN 157
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 26/142 (18%)
Query: 165 KLGEGGFGLV--------YKEIAVKRLSKISEQGLKELKN--EVILFSKLQHRNLVKLLG 214
+G G +G V +++AVK+LS+ + + + E+ L L+H N++ LL
Sbjct: 35 PVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 215 CCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILDWSKRFHIICGTAR 273
F P S+ F V TLM + ++ +C+ L ++ R
Sbjct: 95 V------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR 142
Query: 274 GVMYLHQDSKLRIIHRDLKASN 295
G+ Y+H IIHRDLK SN
Sbjct: 143 GLKYIHSAG---IIHRDLKPSN 161
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +KLG G +G VY+ +AVK L + + + ++E E + +++H NLV
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 276
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+LLG C + +I EFM +L L +R QE ++ ++
Sbjct: 277 QLLGVCTREPPFYIITEFMTYGNL---------LDYLRECNRQEVNAVV----LLYMATQ 323
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ + YL K IHR+L A N
Sbjct: 324 ISSAMEYL---EKKNFIHRNLAARN 345
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 26/142 (18%)
Query: 165 KLGEGGFGLV--------YKEIAVKRLSKISEQGLKELKN--EVILFSKLQHRNLVKLLG 214
+G G +G V +++AVK+LS+ + + + E+ L L+H N++ LL
Sbjct: 27 PVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 86
Query: 215 CCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILDWSKRFHIICGTAR 273
F P S+ F V TLM + ++ +C+ L ++ R
Sbjct: 87 V------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR 134
Query: 274 GVMYLHQDSKLRIIHRDLKASN 295
G+ Y+H IIHRDLK SN
Sbjct: 135 GLKYIHSAG---IIHRDLKPSN 153
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P K+L F V+ LM D C++ LD + +++
Sbjct: 86 ------------FTPQKTLEEFQDVYLVMELM----DANLCQVIQMELDHERMSYLLYQM 129
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSN 150
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P K+L F V+ LM D C++ LD + +++
Sbjct: 86 ------------FTPQKTLEEFQDVYLVMELM----DANLCQVIQMELDHERMSYLLYQM 129
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSN 150
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 25/141 (17%)
Query: 162 INNKLGEGGFGLVYK-----EIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLG 214
++ ++G G FG VYK ++AVK L + + + + +NEV + K +H N++ +G
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 215 CCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARG 274
+ + ++ ++ SL + M +D R TA+G
Sbjct: 100 YMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQ--------------TAQG 144
Query: 275 VMYLHQDSKLRIIHRDLKASN 295
+ YLH + IIHRD+K++N
Sbjct: 145 MDYLHAKN---IIHRDMKSNN 162
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLKE-LKNEVILFSK 203
+N LG G FG V + ++AVK L + KE L +E+ + S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 204 L-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFI-FENFVLTLMRSFVDQERCKILDW 261
L QH N+V LLG C G L+I E+ L +F+ ++ VL +F L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST--LST 163
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H A+G+ +L + IHRD+ A N
Sbjct: 164 RDLLHFSSQVAQGMAFL---ASKNCIHRDVAARN 194
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 20/120 (16%)
Query: 178 IAVKRL-SKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNS 236
+A+K L + +E+ ++ +E + + H N+++L G +G +++ E+M N SL++
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 237 FI-FENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
F+ + T+M + ++ G G+ YL S L +HRDL A N
Sbjct: 140 FLRTHDGQFTIM---------------QLVGMLRGVGAGMRYL---SDLGYVHRDLAARN 181
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY---------------KEIAVKRL-SKISEQGLKELKNEVILF 201
D + LGEG FG V ++AVK L S +E+ L +L +E+ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I E+ +L ++ L + +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
SK + C ARG+ YL + + IHRDL A N
Sbjct: 148 SSKDL-VSCAYQVARGMEYL---ASKKCIHRDLAARN 180
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 33/144 (22%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G G+V + +A+K+LS+ ++ K E++L + H+N++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGT 271
F P K+L F V+ LM D C++ LD + +++
Sbjct: 85 ------------FTPQKTLEEFQDVYLVMELM----DANLCQVIQMELDHERMSYLLYQM 128
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
G+ +LH IIHRDLK SN
Sbjct: 129 LCGIKHLHSAG---IIHRDLKPSN 149
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 20/120 (16%)
Query: 178 IAVKRL-SKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNS 236
+A+K L + +E+ ++ +E + + H N+++L G +G +++ E+M N SL++
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 237 FI-FENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
F+ + T+M + ++ G G+ YL S L +HRDL A N
Sbjct: 140 FLRTHDGQFTIM---------------QLVGMLRGVGAGMRYL---SDLGYVHRDLAARN 181
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY------------KE---IAVKRL-SKISEQGLKELKNEVILF 201
D ++ LGEG FG V KE +AVK L +E+ L +L +E+ +
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I E+ +L ++ + S+ D R
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQ 145
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
+ + + C ARG+ YL + + IHRDL A N
Sbjct: 146 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARN 179
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 25/138 (18%)
Query: 166 LGEGGFG----LVYKE----IAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCI 217
LG+G FG + ++E + +K L + E+ + EV + L+H N++K +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 218 QGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVMY 277
+ + I E++ +L I +S Q WS+R A G+ Y
Sbjct: 78 KDKRLNFITEYIKGGTLRGII---------KSMDSQ-----YPWSQRVSFAKDIASGMAY 123
Query: 278 LHQDSKLRIIHRDLKASN 295
LH + IIHRDL + N
Sbjct: 124 LHS---MNIIHRDLNSHN 138
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 28/171 (16%)
Query: 144 ELPLFELATIANATDNFSINNKLGEGGFGLVY---------------KEIAVKRL-SKIS 187
E P +EL D + LGEG FG V ++AVK L S +
Sbjct: 4 EDPRWELPR-----DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 58
Query: 188 EQGLKELKNEVILFSKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
E+ L +L +E+ + + +H+N++ LLG C Q +I E+ +L ++ L
Sbjct: 59 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 118
Query: 247 MRSFVDQERCKILDWSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
+ + SK + C ARG+ YL + + IHRDL A N
Sbjct: 119 EYCYNPSHNPEEQLSSKDL-VSCAYQVARGMEYL---ASKKCIHRDLAARN 165
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 32/145 (22%)
Query: 166 LGEGGFGLVY------------KEIAVKRLSKISE-QGLKELKNEVILFSKLQHRNLVKL 212
LGEG FG V +++AVK L S + +LK E+ + L H N+VK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 213 LGCCIQ--GEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C + G LI EF+P+ SL ++ +N + KI + ++
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-------------KNKI-NLKQQLKYAVQ 134
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL + +HRDL A N
Sbjct: 135 ICKGMDYL---GSRQYVHRDLAARN 156
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 25/124 (20%)
Query: 178 IAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLN 235
+AVK+LS+ ++ K E++L + H+N++ LL F P K+L
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV------------FTPQKTLE 97
Query: 236 SFIFENFVLTLMRSFVDQERCKI----LDWSKRFHIICGTARGVMYLHQDSKLRIIHRDL 291
F V+ LM D C++ LD + +++ G+ +LH IIHRDL
Sbjct: 98 EFQDVYLVMELM----DANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDL 150
Query: 292 KASN 295
K SN
Sbjct: 151 KPSN 154
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY------------KE---IAVKRL-SKISEQGLKELKNEVILF 201
D ++ LGEG FG V KE +AVK L +E+ L +L +E+ +
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I E+ +L ++ + S+ D R
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQ 142
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
+ + + C ARG+ YL + + IHRDL A N
Sbjct: 143 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARN 176
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLV---YK-----EIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V Y +IAVK+LS+ + + K E+ L
Sbjct: 45 TIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLL 104
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P SL F V LM + ++ +C+ L
Sbjct: 105 KHMKHENVIGLLDV------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLT 152
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 153 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 184
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY------------KE---IAVKRLSK-ISEQGLKELKNEVILF 201
D ++ LGEG FG V KE +AVK L +E+ L +L +E+ +
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I E+ +L ++ + S+ D R
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQ 199
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
+ + + C ARG+ YL + + IHRDL A N
Sbjct: 200 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARN 233
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 29/140 (20%)
Query: 165 KLGEGGFGLV--------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 216
K+GEG G+V +++AVK + +Q + L NEV++ QH N+V++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 217 IQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC-GTARGV 275
+ GEE ++ EF+ +L V Q R ++ +C + +
Sbjct: 112 LVGEELWVLMEFLQGGALT-------------DIVSQVRLN----EEQIATVCEAVLQAL 154
Query: 276 MYLHQDSKLRIIHRDLKASN 295
YLH +IHRD+K+ +
Sbjct: 155 AYLHAQG---VIHRDIKSDS 171
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 29/146 (19%)
Query: 162 INNKLGEGGFGLV---------YKE--IAVKRL-SKISEQGLKELKNEVILFSKLQHRNL 209
I +G G FG V KE +A+K L +E+ +E +E + + +H N+
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
++L G +++ EFM N +L+SF+ N D + I + ++
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLN----------DGQFTVI----QLVGMLR 123
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
G A G+ YL +++ +HRDL A N
Sbjct: 124 GIASGMRYL---AEMSYVHRDLAARN 146
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 29/142 (20%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G +G V +++A+K+LS+ SE K E++L +QH N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWS--KRFHIICGTAR 273
F P SL +F V+ M++ D ++ +++S K +++ +
Sbjct: 110 ------------FTPASSLRNFYDFYLVMPFMQT--DLQKIMGMEFSEEKIQYLVYQMLK 155
Query: 274 GVMYLHQDSKLRIIHRDLKASN 295
G+ Y+H ++HRDLK N
Sbjct: 156 GLKYIHSAG---VVHRDLKPGN 174
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY------------KE---IAVKRLSK-ISEQGLKELKNEVILF 201
D ++ LGEG FG V KE +AVK L +E+ L +L +E+ +
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I E+ +L ++ + S+ D R
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY-DINRVPEEQ 140
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
+ + + C ARG+ YL + + IHRDL A N
Sbjct: 141 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARN 174
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 32/145 (22%)
Query: 166 LGEGGFGLVY------------KEIAVKRLSKISE-QGLKELKNEVILFSKLQHRNLVKL 212
LGEG FG V +++AVK L S + +LK E+ + L H N+VK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 213 LGCCIQ--GEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
G C + G LI EF+P+ SL ++ +N + KI + ++
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-------------KNKI-NLKQQLKYAVQ 122
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL + +HRDL A N
Sbjct: 123 ICKGMDYL---GSRQYVHRDLAARN 144
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 73/171 (42%), Gaps = 30/171 (17%)
Query: 140 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKIS 187
+M E P F EL TI + + + +G G +G V +AVK+LSK
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPF 71
Query: 188 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLT 245
+ + K E+ L ++H N++ LL F P +SL F V
Sbjct: 72 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 119
Query: 246 LMRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
LM + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 120 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 167
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 163 NNKLGEGGFGLVY---------KEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 210
N +G G FG VY K+I AVK L++I++ G + + E I+ H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 211 KLLGCCIQGE-EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
LLG C++ E L++ +M + L +FI R+ K L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFI---------RNETHNPTVKDL-----IGFGL 199
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ +L + + +HRDL A N
Sbjct: 200 QVAKGMKFL---ASKKFVHRDLAARN 222
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 31/151 (20%)
Query: 157 TDNFSINNKLGEGGFGLVY--------KEIAVKRLSK--ISEQGLKE-LKNEVILFSKLQ 205
+D + LG+G FG V +E AVK +SK + ++ KE L EV L +L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVL-TLMRSFVDQERCKILDWSKR 264
H N+ KL YEF +K + E + L + ++R +D ++
Sbjct: 85 HPNIXKL-------------YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR- 130
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
II G+ Y H++ +I+HRDLK N
Sbjct: 131 --IIRQVLSGITYXHKN---KIVHRDLKPEN 156
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 29/146 (19%)
Query: 162 INNKLGEGGFGLV---------YKE--IAVKRL-SKISEQGLKELKNEVILFSKLQHRNL 209
I +G G FG V KE +A+K L +E+ +E +E + + +H N+
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
++L G +++ EFM N +L+SF+ N D + I + ++
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLN----------DGQFTVI----QLVGMLR 125
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
G A G+ YL +++ +HRDL A N
Sbjct: 126 GIASGMRYL---AEMSYVHRDLAARN 148
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 32/143 (22%)
Query: 169 GGFGLVYK-----EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGE--- 220
G FG V+K E ++ I ++ + + EV ++H N+++ +G +G
Sbjct: 35 GRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVD 94
Query: 221 -EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVMYLH 279
+ LI F SL+ F+ + ++ W++ HI ARG+ YLH
Sbjct: 95 VDLWLITAFHEKGSLSDFL----------------KANVVSWNELCHIAETMARGLAYLH 138
Query: 280 QD-------SKLRIIHRDLKASN 295
+D K I HRD+K+ N
Sbjct: 139 EDIPGLKDGHKPAISHRDIKSKN 161
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 30/171 (17%)
Query: 140 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLV--------YKEIAVKRLSKIS 187
+M E P F EL TI + + + +G G +G V +AVK+LS+
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF 79
Query: 188 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLT 245
+ + K E+ L ++H N++ LL F P +SL F V
Sbjct: 80 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 127
Query: 246 LMRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
LM + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 128 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 175
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 36/161 (22%)
Query: 152 TIANATD------NFSINNKLGEGGFG--------LVYKEIAVKRLSK--ISEQGLKELK 195
+I +ATD N+ + +G+G F L +E+AVK + K ++ L++L
Sbjct: 3 SITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF 62
Query: 196 NEVILFSKLQHRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQE 254
EV + L H N+VKL I+ E+ L L+ E+ + ++ V
Sbjct: 63 REVRIMKILNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYL------------VAHG 109
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
R K + +F I V Y HQ I+HRDLKA N
Sbjct: 110 RMKEKEARAKFRQIVS---AVQYCHQKY---IVHRDLKAEN 144
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 29/142 (20%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLLGC 215
+G G +G V +++A+K+LS+ SE K E++L +QH N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWS--KRFHIICGTAR 273
F P SL +F V+ M++ D ++ L +S K +++ +
Sbjct: 92 ------------FTPASSLRNFYDFYLVMPFMQT--DLQKIMGLKFSEEKIQYLVYQMLK 137
Query: 274 GVMYLHQDSKLRIIHRDLKASN 295
G+ Y+H ++HRDLK N
Sbjct: 138 GLKYIHSAG---VVHRDLKPGN 156
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 30/171 (17%)
Query: 140 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLV--------YKEIAVKRLSKIS 187
+M E P F EL TI + + + +G G +G V +AVK+LS+
Sbjct: 19 HMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF 78
Query: 188 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLT 245
+ + K E+ L ++H N++ LL F P +SL F V
Sbjct: 79 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 126
Query: 246 LMRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
LM + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 127 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 174
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 30/171 (17%)
Query: 140 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLV--------YKEIAVKRLSKIS 187
+M E P F EL TI + + + +G G +G V +AVK+LS+
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF 79
Query: 188 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLT 245
+ + K E+ L ++H N++ LL F P +SL F V
Sbjct: 80 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 127
Query: 246 LMRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
LM + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 128 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 175
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY------------KE---IAVKRL-SKISEQGLKELKNEVILF 201
D ++ LGEG FG V KE +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I + +L ++ + S+ D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSY-DINRVPEEQ 153
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
+ + + C ARG+ YL + + IHRDL A N
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARN 187
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 150 LATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLS--KISEQGLKELKNEVI 199
+AT TD++ + +LG+G F +V + E A K ++ K+S + ++L+ E
Sbjct: 23 MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR 82
Query: 200 LFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKIL 259
+ L+H N+V+L + L+++ + L FE+ V S D C
Sbjct: 83 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHC--- 135
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I V ++HQ I+HRDLK N
Sbjct: 136 --------IHQILESVNHIHQHD---IVHRDLKPEN 160
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 163 NNKLGEGGFGLVY---------KEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 210
N +G G FG VY K+I AVK L++I++ G + + E I+ H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 211 KLLGCCIQGE-EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
LLG C++ E L++ +M + L +FI R+ K L
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFI---------RNETHNPTVKDL-----IGFGL 145
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ +L + + +HRDL A N
Sbjct: 146 QVAKGMKFL---ASKKFVHRDLAARN 168
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 25/146 (17%)
Query: 158 DNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 209
D++ I+ +LG G FG+V++ A K + E + ++ E+ S L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
V L E ++IYEFM L FE V E K+ + + +
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGEL----FEK---------VADEHNKMSE-DEAVEYMR 262
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ ++H+++ +H DLK N
Sbjct: 263 QVCKGLCHMHENN---YVHLDLKPEN 285
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 163 NNKLGEGGFGLVY---------KEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 210
N +G G FG VY K+I AVK L++I++ G + + E I+ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 211 KLLGCCIQGE-EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
LLG C++ E L++ +M + L +FI R+ K L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFI---------RNETHNPTVKDL-----IGFGL 141
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ +L + + +HRDL A N
Sbjct: 142 QVAKGMKFL---ASKKFVHRDLAARN 164
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 163 NNKLGEGGFGLVY---------KEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 210
N +G G FG VY K+I AVK L++I++ G + + E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 211 KLLGCCIQGE-EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
LLG C++ E L++ +M + L +FI R+ K L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFI---------RNETHNPTVKDL-----IGFGL 140
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ +L + + +HRDL A N
Sbjct: 141 QVAKGMKFL---ASKKFVHRDLAARN 163
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 163 NNKLGEGGFGLVY---------KEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 210
N +G G FG VY K+I AVK L++I++ G + + E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 211 KLLGCCIQGE-EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
LLG C++ E L++ +M + L +FI R+ K L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFI---------RNETHNPTVKDL-----IGFGL 140
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ +L + + +HRDL A N
Sbjct: 141 QVAKGMKFL---ASKKFVHRDLAARN 163
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 31/154 (20%)
Query: 166 LGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGC-- 215
+G GGFG V+K ++R+ +E+ +E+K +KL H N+V GC
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVK----ALAKLDHVNIVHYNGCWD 75
Query: 216 -----CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSF---------VDQERCKILDW 261
++ L ++ P S NS + L + F +++ R + LD
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 135
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ +GV Y+H ++IHRDLK SN
Sbjct: 136 VLALELFEQITKGVDYIHSK---KLIHRDLKPSN 166
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 158 DNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 209
D++ I+ +LG G FG+V++ A K + E + ++ E+ S L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 210 VKLLGCCIQGEEKLLIYEFM 229
V L E ++IYEFM
Sbjct: 111 VNLHDAFEDDNEMVMIYEFM 130
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 29/146 (19%)
Query: 162 INNKLGEGGFGLV---------YKEI--AVKRL-SKISEQGLKELKNEVILFSKLQHRNL 209
I +G G FG V +EI A+K L S +E+ ++ +E + + H N+
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
+ L G + ++I EFM N SL+SF+ +N D + I + ++
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQN----------DGQFTVI----QLVGMLR 116
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
G A G+ YL + + +HR L A N
Sbjct: 117 GIAAGMKYL---ADMNYVHRALAARN 139
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 38/186 (20%)
Query: 125 QDLYIRMSASEIENRNMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK---- 176
++LY + +AS+ E P F EL TI + + + +G G +G V
Sbjct: 16 ENLYFQSNASQ--------ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDT 67
Query: 177 ----EIAVKRLSKISEQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMP 230
+AVK+LS+ + + K E+ L ++H N++ LL F P
Sbjct: 68 KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTP 115
Query: 231 NKSLNSFIFENFVLTLMRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHR 289
+SL F V LM + ++ +C+ L +I RG+ Y+H IIHR
Sbjct: 116 ARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHR 172
Query: 290 DLKASN 295
DLK SN
Sbjct: 173 DLKPSN 178
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 163 NNKLGEGGFGLVY---------KEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 210
N +G G FG VY K+I AVK L++I++ G + + E I+ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 211 KLLGCCIQGE-EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
LLG C++ E L++ +M + L +FI R+ K L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFI---------RNETHNPTVKDL-----IGFGL 138
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ +L + + +HRDL A N
Sbjct: 139 QVAKGMKFL---ASKKFVHRDLAARN 161
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 163 NNKLGEGGFGLVY---------KEI--AVKRLSKISEQG-LKELKNEVILFSKLQHRNLV 210
N +G G FG VY K+I AVK L++I++ G + + E I+ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 211 KLLGCCIQGE-EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
LLG C++ E L++ +M + L +FI R+ K L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFI---------RNETHNPTVKDL-----IGFGL 141
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
A+G+ +L + + +HRDL A N
Sbjct: 142 QVAKGMKFL---ASKKFVHRDLAARN 164
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 29/160 (18%)
Query: 149 ELA-TIANATDNFSINNKLGEGGFGLV--------YKEIAVKRLSKISEQGL--KELKNE 197
ELA TI + + + +G G +G V +AVK+LS+ + + K E
Sbjct: 8 ELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE 67
Query: 198 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERC 256
+ L ++H N++ LL F P +SL F V LM + ++ +C
Sbjct: 68 LRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 115
Query: 257 -KILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
K+ D +F +I RG+ Y+H IIHRDLK SN
Sbjct: 116 AKLTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSN 151
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLV--------YKEIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 30/143 (20%)
Query: 166 LGEGGFGLVYK------------EIAVKRL-SKISEQGLKELKNEVILFSKLQHRNLVKL 212
+G G FG VYK +A+K L + +E+ + E + + H N+++L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
G + + ++I E+M N +L+ F+ E D E + + ++ G A
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREK----------DGEFSVL----QLVGMLRGIA 157
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
G+ YL + + +HRDL A N
Sbjct: 158 AGMKYL---ANMNYVHRDLAARN 177
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLV--------YKEIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLV--------YKEIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 30/171 (17%)
Query: 140 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKIS 187
+M E P F EL TI + + + +G G +G V +AVK+LS+
Sbjct: 19 HMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 78
Query: 188 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLT 245
+ + K E+ L ++H N++ LL F P +SL F V
Sbjct: 79 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 126
Query: 246 LMRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
LM + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 127 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 174
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLV--------YKEIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 30/171 (17%)
Query: 140 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKIS 187
+M E P F EL TI + + + +G G +G V +AVK+LS+
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 79
Query: 188 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLT 245
+ + K E+ L ++H N++ LL F P +SL F V
Sbjct: 80 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 127
Query: 246 LMRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
LM + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 128 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 175
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 23/157 (14%)
Query: 158 DNFSINNKLGEGGFGLVY------------KE---IAVKRL-SKISEQGLKELKNEVILF 201
D ++ LGEG FG V KE +AVK L +E+ L +L +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 202 SKL-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ +H+N++ LLG C Q +I + +L ++ + S+ D R
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSY-DINRVPEEQ 153
Query: 261 WSKRFHIICG--TARGVMYLHQDSKLRIIHRDLKASN 295
+ + + C ARG+ YL + + IHRDL A N
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARN 187
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 158 DNFSINNKLGEGGFGLV--------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 209
DNF K+GEG G+V K +AVK++ +Q + L NEV++ QH N+
Sbjct: 27 DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSLNSFI 238
V++ + G+E ++ EF+ +L +
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALTDIV 112
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 30/171 (17%)
Query: 140 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKIS 187
+M E P F EL TI + + + +G G +G V +AVK+LS+
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 71
Query: 188 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLT 245
+ + K E+ L ++H N++ LL F P +SL F V
Sbjct: 72 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 119
Query: 246 LMRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
LM + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 120 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 167
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 30/171 (17%)
Query: 140 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKIS 187
+M E P F EL TI + + + +G G +G V +AVK+LS+
Sbjct: 2 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 61
Query: 188 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLT 245
+ + K E+ L ++H N++ LL F P +SL F V
Sbjct: 62 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 109
Query: 246 LMRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
LM + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 110 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 157
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 30/171 (17%)
Query: 140 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKIS 187
+M E P F EL TI + + + +G G +G V +AVK+LS+
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 71
Query: 188 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLT 245
+ + K E+ L ++H N++ LL F P +SL F V
Sbjct: 72 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 119
Query: 246 LMRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
LM + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 120 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 167
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 158 DNFSINNKLGEGGFGLV--------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 209
DNF K+GEG G+V K +AVK++ +Q + L NEV++ QH N+
Sbjct: 32 DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSLNSFI 238
V++ + G+E ++ EF+ +L +
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALTDIV 117
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 158 DNFSINNKLGEGGFGLV--------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 209
DNF K+GEG G+V K +AVK++ +Q + L NEV++ QH N+
Sbjct: 23 DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSLNSFI 238
V++ + G+E ++ EF+ +L +
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALTDIV 108
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 30/171 (17%)
Query: 140 NMDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKIS 187
+M E P F EL TI + + + +G G +G V +AVK+LS+
Sbjct: 2 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 61
Query: 188 EQGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLT 245
+ + K E+ L ++H N++ LL F P +SL F V
Sbjct: 62 QSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTH 109
Query: 246 LMRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
LM + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 110 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 157
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLV--------YKEIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 72 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 119
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 120 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 151
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLV--------YKEIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 72 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 119
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 120 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 151
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 158 DNFSINNKLGEGGFGLV--------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 209
DNF K+GEG G+V K +AVK++ +Q + L NEV++ QH N+
Sbjct: 34 DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSLNSFI 238
V++ + G+E ++ EF+ +L +
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALTDIV 119
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 62
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 110
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 111 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 157
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 71
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 119
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 120 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 166
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 24 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 83
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 84 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 131
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 132 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 178
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLV--------YKEIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 82 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 130 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 161
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + +L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + L+ + MP L + EN R + + +L+W + A
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVREN------RGRLGSQ--DLLNWCMQI------A 129
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL +R++HRDL A N
Sbjct: 130 KGMSYLED---VRLVHRDLAARN 149
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 30/148 (20%)
Query: 159 NFSINNKLGEGGFG--------LVYKEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 208
N+ + +G+G F L +E+A+K + K ++ L++L EV + L H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 209 LVKLLGCCIQGEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHI 267
+VKL I+ E+ L LI E+ + ++ V R K + +F
Sbjct: 76 IVKLFEV-IETEKTLYLIMEYASGGEVFDYL------------VAHGRMKEKEARSKFRQ 122
Query: 268 ICGTARGVMYLHQDSKLRIIHRDLKASN 295
I V Y HQ RI+HRDLKA N
Sbjct: 123 IVS---AVQYCHQK---RIVHRDLKAEN 144
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 72 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 119
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 120 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 151
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 83 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 131 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 162
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 73 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 120
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 121 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 152
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 124 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 83 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 131 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 162
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 7 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 66
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 114
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 115 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 161
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 30/148 (20%)
Query: 166 LGEGGFGLVYK-----------EIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKL 212
LGEG FG V + ++AVK +L S++ ++E +E H N+++L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 213 LGCCI----QGEEK-LLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHI 267
LG CI QG K ++I FM L++++ + + T + Q K +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFM-------- 153
Query: 268 ICGTARGVMYLHQDSKLRIIHRDLKASN 295
A G+ YL S +HRDL A N
Sbjct: 154 -VDIALGMEYL---SNRNFLHRDLAARN 177
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 83 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 131 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 162
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 83 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 131 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 162
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 158 DNFSINNKLGEGGFGLV--------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 209
DNF K+GEG G+V K +AVK++ +Q + L NEV++ QH N+
Sbjct: 77 DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 133
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSLNSFI 238
V++ + G+E ++ EF+ +L +
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALTDIV 162
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 78 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 126 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 157
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 21 TIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 81 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 129 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 160
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 81 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 129 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 160
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 14 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 73
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 74 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 121
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 122 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 153
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 15 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 74
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 75 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 122
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 123 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 154
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 71
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 119
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 120 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 166
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 73 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 120
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 121 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 152
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 158 DNFSINNKLGEGGFGLV--------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNL 209
DNF K+GEG G+V K +AVK++ +Q + L NEV++ QH N+
Sbjct: 154 DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 210
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSLNSFI 238
V++ + G+E ++ EF+ +L +
Sbjct: 211 VEMYNSYLVGDELWVVMEFLEGGALTDIV 239
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 6 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 65
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 113
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 114 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 160
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGXLLDYVREH------KDNIGSQY--LLNWCVQI------A 128
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 129 KGMNYLEDR---RLVHRDLAARN 148
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 30/148 (20%)
Query: 159 NFSINNKLGEGGFG--------LVYKEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 208
N+ + +G+G F L +E+A+K + K ++ L++L EV + L H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 209 LVKLLGCCIQGEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHI 267
+VKL I+ E+ L LI E+ + ++ V R K + +F
Sbjct: 73 IVKLFEV-IETEKTLYLIMEYASGGEVFDYL------------VAHGRMKEKEARSKFRQ 119
Query: 268 ICGTARGVMYLHQDSKLRIIHRDLKASN 295
I V Y HQ RI+HRDLKA N
Sbjct: 120 IVS---AVQYCHQK---RIVHRDLKAEN 141
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 32/171 (18%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ--ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ + K+ D +F +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKXQKLTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 30/170 (17%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 7 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 66
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 114
Query: 247 MRSFVDQ-ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ +C+ L +I RG+ Y+H IIHRDLK SN
Sbjct: 115 MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 161
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 83 LGICLTSTVQ-LITQLMPFGXLLDYVREH------KDNIGSQY--LLNWCVQI------A 127
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 128 KGMNYLEDR---RLVHRDLAARN 147
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 29/141 (20%)
Query: 164 NKLGEGGFGLVY-------KEIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 214
++G G FGLV+ ++A+K R +SE+ E + EV++ KL H LV+L G
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPKLVQLYG 72
Query: 215 CCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARG 274
C++ L++EFM + L+ ++ L + + LD +C G
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM----CLD-------VC---EG 118
Query: 275 VMYLHQDSKLRIIHRDLKASN 295
+ YL + +IHRDL A N
Sbjct: 119 MAYLEEAC---VIHRDLAARN 136
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLV--------YKEIAVKRLSKISEQGL--KELKNEVILF 201
TI + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 26 TIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 85
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 86 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 133
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 134 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 165
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 76/158 (48%), Gaps = 29/158 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLVY--------KEIAVKRLSKISEQGLKELK-NE 197
L + ++ + ++ K+G+G G VY +E+A+++++ + +Q KEL NE
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINE 67
Query: 198 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCK 257
+++ + ++ N+V L + G+E ++ E++ SL + E C
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--------------C- 112
Query: 258 ILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+D + + + + +LH + ++IHRD+K+ N
Sbjct: 113 -MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDN 146
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 76/158 (48%), Gaps = 29/158 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLVY--------KEIAVKRLSKISEQGLKELK-NE 197
L + ++ + ++ K+G+G G VY +E+A+++++ + +Q KEL NE
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINE 67
Query: 198 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCK 257
+++ + ++ N+V L + G+E ++ E++ SL + E C
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--------------C- 112
Query: 258 ILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+D + + + + +LH + ++IHRD+K+ N
Sbjct: 113 -MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDN 146
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 152 TIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ--ERCKIL 259
++H N++ LL F P +SL F V LM + ++ + K+
Sbjct: 76 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLT 123
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
D +F +I RG+ Y+H IIHRDLK SN
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 82 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 130 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 161
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 32/171 (18%)
Query: 141 MDLELPLF---EL-ATIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISE 188
M E P F EL TI + + + +G G +G V +AVK+LS+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 189 QGL--KELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL 246
+ K E+ L ++H N++ LL F P +SL F V L
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHL 108
Query: 247 MRSFVDQ--ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
M + ++ + K+ D +F +I RG+ Y+H IIHRDLK SN
Sbjct: 109 MGADLNNIVKXQKLTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSN 155
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 152 TIANATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGL--KELKNEVILF 201
TI + + + +G G +G V +AVK+LS+ + + K E+ L
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 202 SKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILD 260
++H N++ LL F P +SL F V LM + ++ +C+ L
Sbjct: 81 KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I RG+ Y+H IIHRDLK SN
Sbjct: 129 DDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSN 160
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 29/141 (20%)
Query: 164 NKLGEGGFGLVY-------KEIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 214
++G G FGLV+ ++A+K R +SE+ E + EV++ KL H LV+L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPKLVQLYG 69
Query: 215 CCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARG 274
C++ L++EFM + L+ + L R E + G
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDY------LRTQRGLFAAETL--------LGMCLDVCEG 115
Query: 275 VMYLHQDSKLRIIHRDLKASN 295
+ YL + +IHRDL A N
Sbjct: 116 MAYLEEAC---VIHRDLAARN 133
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 29/141 (20%)
Query: 164 NKLGEGGFGLVY-------KEIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 214
++G G FGLV+ ++A+K R +SE+ E + EV++ KL H LV+L G
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPKLVQLYG 67
Query: 215 CCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARG 274
C++ L++EFM + L+ + L R E + G
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDY------LRTQRGLFAAETL--------LGMCLDVCEG 113
Query: 275 VMYLHQDSKLRIIHRDLKASN 295
+ YL + +IHRDL A N
Sbjct: 114 MAYLEEAC---VIHRDLAARN 131
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 63/146 (43%), Gaps = 36/146 (24%)
Query: 166 LGEGGFGLVY------------KEIAVKRL-SKISEQGLKELKNEVILFSKLQHRNLVKL 212
LGEG FG V + +AVK L + Q K E+ + L H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 213 LGCCI-QGEEKL-LIYEFMPNKSLNSFIFENFV-LTLMRSFVDQERCKILDWSKRFHIIC 269
GCC QGE+ L L+ E++P SL ++ + + L + F Q IC
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ--------------IC 127
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
G+ YLH IHR+L A N
Sbjct: 128 ---EGMAYLHSQ---HYIHRNLAARN 147
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 76/158 (48%), Gaps = 29/158 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLVY--------KEIAVKRLSKISEQGLKELK-NE 197
L + ++ + ++ K+G+G G VY +E+A+++++ + +Q KEL NE
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINE 67
Query: 198 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCK 257
+++ + ++ N+V L + G+E ++ E++ SL + E C
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--------------C- 112
Query: 258 ILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+D + + + + +LH + ++IHRD+K+ N
Sbjct: 113 -MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDN 146
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 27/139 (19%)
Query: 166 LGEGGFGLVYK----EIAVKRLSKI-SEQGLK---ELKNEVILFSKLQHRNLVKLLGCCI 217
LG G FG V+K +K +KI +G+K E+KNE+ + ++L H NL++L
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 218 QGEEKLLIYEFMPNKSL-NSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVM 276
+ +L+ E++ L + I E++ LT + + + ++ IC G+
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ------------IC---EGIR 201
Query: 277 YLHQDSKLRIIHRDLKASN 295
++HQ + I+H DLK N
Sbjct: 202 HMHQ---MYILHLDLKPEN 217
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 63/146 (43%), Gaps = 36/146 (24%)
Query: 166 LGEGGFGLVY------------KEIAVKRL-SKISEQGLKELKNEVILFSKLQHRNLVKL 212
LGEG FG V + +AVK L + Q K E+ + L H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 213 LGCCI-QGEEKL-LIYEFMPNKSLNSFIFENFV-LTLMRSFVDQERCKILDWSKRFHIIC 269
GCC QGE+ L L+ E++P SL ++ + + L + F Q IC
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ--------------IC 127
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
G+ YLH IHR+L A N
Sbjct: 128 ---EGMAYLHAQ---HYIHRNLAARN 147
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 128
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 129 KGMNYLEDR---RLVHRDLAARN 148
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 89 LGICLTSTVQ-LITQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 133
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 134 KGMNYLEDR---RLVHRDLAARN 153
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 86 LGICLTSTVQ-LIMQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 130
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 131 KGMNYLEDR---RLVHRDLAARN 150
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 129
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 130 KGMNYLEDR---RLVHRDLAARN 149
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 32/165 (19%)
Query: 144 ELPLFELATIANATDNFSINNKLGEGGFGLVYK------------EIAVKRLSK-ISEQG 190
E P L I T+ F LG G FG VYK +A+K L + S +
Sbjct: 4 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 191 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSF 250
KE+ +E + + + + ++ +LLG C+ + LI + MP L ++ E+ +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREH------KDN 115
Query: 251 VDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + +L+W + A+G+ YL R++HRDL A N
Sbjct: 116 IGSQY--LLNWCVQI------AKGMNYLEDR---RLVHRDLAARN 149
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 77 LGICLTSTVQ-LITQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 121
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 122 KGMNYLEDR---RLVHRDLAARN 141
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 131
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 132 KGMNYLEDR---RLVHRDLAARN 151
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 108 LGICLTSTVQ-LITQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 152
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 153 KGMNYLEDR---RLVHRDLAARN 172
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 76/158 (48%), Gaps = 29/158 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLVY--------KEIAVKRLSKISEQGLKELK-NE 197
L + ++ + ++ K+G+G G VY +E+A+++++ + +Q KEL NE
Sbjct: 10 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINE 68
Query: 198 VILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCK 257
+++ + ++ N+V L + G+E ++ E++ SL + E C
Sbjct: 69 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--------------C- 113
Query: 258 ILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+D + + + + +LH + ++IHRD+K+ N
Sbjct: 114 -MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDN 147
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 83 LGICLTSTVQ-LIMQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 127
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 128 KGMNYLEDR---RLVHRDLAARN 147
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 129
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 130 KGMNYLEDR---RLVHRDLAARN 149
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 32/165 (19%)
Query: 144 ELPLFELATIANATDNFSINNKLGEGGFGLVYK------------EIAVKRLSK-ISEQG 190
E P L I T+ F LG G FG VYK +A+K L + S +
Sbjct: 2 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 191 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSF 250
KE+ +E + + + + ++ +LLG C+ + LI + MP L ++ E+ +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREH------KDN 113
Query: 251 VDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + +L+W + A+G+ YL R++HRDL A N
Sbjct: 114 IGSQY--LLNWCVQI------AKGMNYLEDR---RLVHRDLAARN 147
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 131
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 132 KGMNYLEDR---RLVHRDLAARN 151
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 134
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 135 KGMNYLEDR---RLVHRDLAARN 154
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 130
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 131 KGMNYLEDR---RLVHRDLAARN 150
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 32/165 (19%)
Query: 144 ELPLFELATIANATDNFSINNKLGEGGFGLVYK------------EIAVKRLSK-ISEQG 190
E P L I T+ F LG G FG VYK +A+K L + S +
Sbjct: 4 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 191 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSF 250
KE+ +E + + + + ++ +LLG C+ + LI + MP L ++ E+ +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREH------KDN 115
Query: 251 VDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + +L+W + A+G+ YL R++HRDL A N
Sbjct: 116 IGSQY--LLNWCVQI------AKGMNYLEDR---RLVHRDLAARN 149
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 130
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 131 KGMNYLEDR---RLVHRDLAARN 150
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 130
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 131 KGMNYLEDR---RLVHRDLAARN 150
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 32/165 (19%)
Query: 144 ELPLFELATIANATDNFSINNKLGEGGFGLVYK------------EIAVKRLSK-ISEQG 190
E P L I T+ F LG G FG VYK +A+K L + S +
Sbjct: 9 EAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 191 LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSF 250
KE+ +E + + + + ++ +LLG C+ + LI + MP L ++ E+ +
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREH------KDN 120
Query: 251 VDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + +L+W + A+G+ YL R++HRDL A N
Sbjct: 121 IGSQY--LLNWCVQI------AKGMNYLEDR---RLVHRDLAARN 154
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 127
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 128 KGMNYLEDR---RLVHRDLAARN 147
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 129
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 130 KGMNYLEDR---RLVHRDLAARN 149
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 127
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 128 KGMNYLEDR---RLVHRDLAARN 147
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 93 LGICLTSTVQ-LITQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 137
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 138 KGMNYLEDR---RLVHRDLAARN 157
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 16/140 (11%)
Query: 165 KLGEGGFGLVY--------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCC 216
LG GG GLV+ K +A+K++ Q +K E+ + +L H N+VK+
Sbjct: 18 PLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEIL 77
Query: 217 IQGEEKLLIYEFMPNKSLNS-FIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGV 275
+ L + LNS +I + ++ T + + ++Q +L+ R + RG+
Sbjct: 78 GPSGSQ-LTDDVGSLTELNSVYIVQEYMETDLANVLEQ--GPLLEEHARL-FMYQLLRGL 133
Query: 276 MYLHQDSKLRIIHRDLKASN 295
Y+H + ++HRDLK +N
Sbjct: 134 KYIHSAN---VLHRDLKPAN 150
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 158 DNFSINNKLGEGGFGLVYK---------------EIAVKRLSKISEQGLKELKNEVILFS 202
++ N LG+G F ++K E+ +K L K + + S
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67
Query: 203 KLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFEN 241
KL H++LV G C+ G+E +L+ EF+ SL++++ +N
Sbjct: 68 KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKN 106
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 29/160 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELK 195
L E+ D+F I LG+G FG VY +E +A+K L S++ ++G++ +L+
Sbjct: 3 LAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR 62
Query: 196 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQER 255
E+ + S L+H N++++ + L+ EF P L + + ++
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL---------------YKELQK 107
Query: 256 CKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
D + + A + Y H+ ++IHRD+K N
Sbjct: 108 HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPEN 144
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 28/143 (19%)
Query: 165 KLGEGGFGLV--------YKEIAVKRLSKISEQGLKELKN--EVILFSKLQHRNLVKLLG 214
+G G +G V +++AVK+LS+ + + + E+ L L+H N++ LL
Sbjct: 35 PVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 215 CCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ--ERCKILDWSKRFHIICGTA 272
F P S+ F V TLM + ++ + + D +F ++
Sbjct: 95 V------------FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQLL 141
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
RG+ Y+H IIHRDLK SN
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSN 161
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 29/160 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELK 195
L E+ D+F I LG+G FG VY +E +A+K L S++ ++G++ +L+
Sbjct: 4 LAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR 63
Query: 196 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQER 255
E+ + S L+H N++++ + L+ EF P L + + ++
Sbjct: 64 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL---------------YKELQK 108
Query: 256 CKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
D + + A + Y H+ ++IHRD+K N
Sbjct: 109 HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPEN 145
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 39/147 (26%)
Query: 166 LGEGGFGLVYKE--------IAVKRLS---------KISEQGLKELKNEVILFSKLQHRN 208
LGEG F VYK +A+K++ I+ L+E+K L +L H N
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK----LLQELSHPN 73
Query: 209 LVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHII 268
++ LL L+++FM L I +N L L S + K + ++
Sbjct: 74 IIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDN-SLVLTPSHI-----------KAYMLM 120
Query: 269 CGTARGVMYLHQDSKLRIIHRDLKASN 295
T +G+ YLHQ I+HRDLK +N
Sbjct: 121 --TLQGLEYLHQHW---ILHRDLKPNN 142
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 20/143 (13%)
Query: 166 LGEGGFGLVYK--------EIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLVKLLGCC 216
LG GGFG+V++ A+KR+ + + +E + EV +KL+H +V+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 217 IQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVD--QERCKILDWSKR--FHIICGTA 272
+ EK + P+ S +++ L + D RC I + + HI A
Sbjct: 73 L---EKNTTEKLQPS-SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
V +LH ++HRDLK SN
Sbjct: 129 EAVEFLHSKG---LMHRDLKPSN 148
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSK-ISEQGLKELKNEVILFSK 203
+ ++ +LG+G FG+VY+ +AVK +++ S + E NE +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSK 263
++V+LLG +G+ L++ E M + L S++ +L + +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-----RSLRPEAENNPGRPPPTLQE 131
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ A G+ YL+ + +HRDL A N
Sbjct: 132 MIQMAAEIADGMAYLNAK---KFVHRDLAARN 160
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSK-ISEQGLKELKNEVILFSK 203
+ ++ +LG+G FG+VY+ +AVK +++ S + E NE +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSK 263
++V+LLG +G+ L++ E M + L S++ +L + +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-----RSLRPEAENNPGRPPPTLQE 131
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ A G+ YL+ + +HRDL A N
Sbjct: 132 MIQMAAEIADGMAYLNAK---KFVHRDLAARN 160
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 80 LGICLTSTVQ-LITQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 124
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
G+ YL R++HRDL A N
Sbjct: 125 EGMNYLEDR---RLVHRDLAARN 144
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSK-ISEQGLKELKNEVILFSK 203
+ ++ +LG+G FG+VY+ +AVK +++ S + E NE +
Sbjct: 16 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 75
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSK 263
++V+LLG +G+ L++ E M + L S++ +L + +
Sbjct: 76 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-----RSLRPEAENNPGRPPPTLQE 130
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ A G+ YL+ + +HRDL A N
Sbjct: 131 MIQMAAEIADGMAYLNAK---KFVHRDLAARN 159
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSK-ISEQGLKELKNEVILFSK 203
+ ++ +LG+G FG+VY+ +AVK +++ S + E NE +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSK 263
++V+LLG +G+ L++ E M + L S++ +L + +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-----RSLRPEAENNPGRPPPTLQE 131
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ A G+ YL+ + +HRDL A N
Sbjct: 132 MIQMAAEIADGMAYLNAK---KFVHRDLAARN 160
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 30/148 (20%)
Query: 159 NFSINNKLGEGGFG--------LVYKEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 208
N+ + +G+G F L KE+AVK + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 209 LVKLLGCCIQGEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHI 267
+VKL I+ E+ L L+ E+ + ++ V R K + +F
Sbjct: 75 IVKLFE-VIETEKTLYLVMEYASGGEVFDYL------------VAHGRMKEKEARAKFRQ 121
Query: 268 ICGTARGVMYLHQDSKLRIIHRDLKASN 295
I V Y HQ I+HRDLKA N
Sbjct: 122 IVS---AVQYCHQKF---IVHRDLKAEN 143
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSK-ISEQGLKELKNEVILFSK 203
+ ++ +LG+G FG+VY+ +AVK +++ S + E NE +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSK 263
++V+LLG +G+ L++ E M + L S++ +L + +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-----RSLRPEAENNPGRPPPTLQE 131
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ A G+ YL+ + +HRDL A N
Sbjct: 132 MIQMAAEIADGMAYLNAK---KFVHRDLAARN 160
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSK-ISEQGLKELKNEVILFSK 203
+ ++ +LG+G FG+VY+ +AVK +++ S + E NE +
Sbjct: 14 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 73
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSK 263
++V+LLG +G+ L++ E M + L S++ +L + +
Sbjct: 74 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-----RSLRPEAENNPGRPPPTLQE 128
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ A G+ YL+ + +HRDL A N
Sbjct: 129 MIQMAAEIADGMAYLNAK---KFVHRDLAARN 157
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 30/148 (20%)
Query: 159 NFSINNKLGEGGFG--------LVYKEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 208
N+ + +G+G F L KE+AVK + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 209 LVKLLGCCIQGEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHI 267
+VKL I+ E+ L L+ E+ + ++ V R K + +F
Sbjct: 75 IVKLFE-VIETEKTLYLVMEYASGGEVFDYL------------VAHGRMKEKEARAKFRQ 121
Query: 268 ICGTARGVMYLHQDSKLRIIHRDLKASN 295
I V Y HQ I+HRDLKA N
Sbjct: 122 IVS---AVQYCHQKF---IVHRDLKAEN 143
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 34/177 (19%)
Query: 133 ASEIENRNMDLELPLFELATIANATDNFSINNKLGEGGFGLVYK-------EIAVKRLSK 185
AS+ R++D +L+ + + F + +G G +G VYK ++A ++
Sbjct: 3 ASDSPARSLDE----IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD 58
Query: 186 ISEQGLKELKNEVILFSKL-QHRNLVKLLGCCIQ------GEEKLLIYEFMPNKSLNSFI 238
++ +E+K E+ + K HRN+ G I+ ++ L+ EF S+ I
Sbjct: 59 VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI 118
Query: 239 FENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
TL ++ +I RG+ +LHQ ++IHRD+K N
Sbjct: 119 KNTKGNTLKEEWI-------------AYICREILRGLSHLHQH---KVIHRDIKGQN 159
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 29/148 (19%)
Query: 160 FSINNKLGEGGFGLVYK-----------EIAVKRLS-KISEQGLKELKNEVILFSKLQHR 207
+I +G G FG V +A+K L +E+ ++ E + + H
Sbjct: 24 ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 83
Query: 208 NLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHI 267
N++ L G + + +++ E+M N SL++F+ +N + V R
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR------------ 131
Query: 268 ICGTARGVMYLHQDSKLRIIHRDLKASN 295
G + G+ YL S + +HRDL A N
Sbjct: 132 --GISAGMKYL---SDMGYVHRDLAARN 154
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 30/148 (20%)
Query: 159 NFSINNKLGEGGFG--------LVYKEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 208
N+ + +G+G F L KE+AVK + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 209 LVKLLGCCIQGEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHI 267
+VKL I+ E+ L L+ E+ + ++ V R K + +F
Sbjct: 75 IVKLFE-VIETEKTLYLVMEYASGGEVFDYL------------VAHGRMKEKEARAKFRQ 121
Query: 268 ICGTARGVMYLHQDSKLRIIHRDLKASN 295
I V Y HQ I+HRDLKA N
Sbjct: 122 IVS---AVQYCHQKF---IVHRDLKAEN 143
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 29/141 (20%)
Query: 164 NKLGEGGFGLVY-------KEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRNLVKLLG 214
++G G FGLV+ ++A+K + + +SE E + EV++ KL H LV+L G
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIE-EAEVMM--KLSHPKLVQLYG 89
Query: 215 CCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARG 274
C++ L++EFM + L+ + L R E + G
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDY------LRTQRGLFAAETL--------LGMCLDVCEG 135
Query: 275 VMYLHQDSKLRIIHRDLKASN 295
+ YL + +IHRDL A N
Sbjct: 136 MAYLEEAC---VIHRDLAARN 153
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 178 IAVKRLS-KISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNS 236
+A+K L +E+ ++ E + + H N+V L G +G+ +++ EFM N +L++
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDA 133
Query: 237 FIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
F+ ++ + V R G A G+ YL + + +HRDL A N
Sbjct: 134 FLRKHDGQFTVIQLVGMLR--------------GIAAGMRYL---ADMGYVHRDLAARN 175
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 157 TDNFSINNKLGEGGFGLVY--------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRN 208
+D F + ++LG G +VY K A+K L K ++ K ++ E+ + +L H N
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPN 109
Query: 209 LVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHII 268
++KL E L+ E + L I E + R D + +IL+
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYS-ERDAADAVK-QILE-------- 159
Query: 269 CGTARGVMYLHQDSKLRIIHRDLKASN 295
V YLH++ I+HRDLK N
Sbjct: 160 -----AVAYLHENG---IVHRDLKPEN 178
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + KL+H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M SL F+ E K L + +
Sbjct: 243 QLY-AVVSEEPIYIVTEYMSKGSLLDFL-------------KGETGKYLRLPQLVDMAAQ 288
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 289 IASGMAYVE---RMNYVHRDLRAAN 310
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 29/141 (20%)
Query: 164 NKLGEGGFGLVY-------KEIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 214
++G G FGLV+ ++A+K R +SE+ E + EV++ KL H LV+L G
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPKLVQLYG 70
Query: 215 CCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARG 274
C++ L+ EFM + L+ ++ L + + LD +C G
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGM----CLD-------VC---EG 116
Query: 275 VMYLHQDSKLRIIHRDLKASN 295
+ YL + +IHRDL A N
Sbjct: 117 MAYLEEAC---VIHRDLAARN 134
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + KL+H LV
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 325
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M SL F+ E K L + +
Sbjct: 326 QLY-AVVSEEPIYIVTEYMSKGSLLDFL-------------KGETGKYLRLPQLVDMAAQ 371
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 372 IASGMAYVE---RMNYVHRDLRAAN 393
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + KL+H LV
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 66
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M SL F+ E K L + +
Sbjct: 67 QLY-AVVSEEPIXIVTEYMSKGSLLDFL-------------KGETGKYLRLPQLVDMAAQ 112
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 113 IASGMAYVE---RMNYVHRDLRAAN 134
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + KL+H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M SL F+ E K L + +
Sbjct: 243 QLY-AVVSEEPIYIVTEYMSKGSLLDFL-------------KGETGKYLRLPQLVDMAAQ 288
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 289 IASGMAYVE---RMNYVHRDLRAAN 310
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 26/147 (17%)
Query: 158 DNFSINNKLGEGGFGLVYKE--------IAVKRLSKISEQGLK-ELKNEVILFSKLQHRN 208
++ + ++G G FG V+ +AVK + LK + E + + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 209 LVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHII 268
+V+L+G C Q + ++ E + LT +R+ + R K L ++
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDF---------LTFLRTEGARLRVKTL-----LQMV 219
Query: 269 CGTARGVMYLHQDSKLRIIHRDLKASN 295
A G+ YL +SK IHRDL A N
Sbjct: 220 GDAAAGMEYL--ESKC-CIHRDLAARN 243
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 29/160 (18%)
Query: 147 LFELATIANATDNFSINNKLGEGGFGLVY--KE------IAVKRL--SKISEQGLK-ELK 195
L E+ D+F I LG+G FG VY +E +A+K L S++ ++G++ +L+
Sbjct: 3 LAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR 62
Query: 196 NEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQER 255
E+ + S L+H N++++ + L+ EF P L + + ++
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL---------------YKELQK 107
Query: 256 CKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
D + + A + Y H+ ++IHRD+K N
Sbjct: 108 HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPEN 144
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + KL+H LV
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 69
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M SL F+ E K L + +
Sbjct: 70 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-------------KGETGKYLRLPQLVDMAAQ 115
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 116 IASGMAYVE---RMNYVHRDLRAAN 137
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 26/147 (17%)
Query: 158 DNFSINNKLGEGGFGLVYKE--------IAVKRLSKISEQGLK-ELKNEVILFSKLQHRN 208
++ + ++G G FG V+ +AVK + LK + E + + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 209 LVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHII 268
+V+L+G C Q + ++ E + LT +R+ + R K L ++
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDF---------LTFLRTEGARLRVKTL-----LQMV 219
Query: 269 CGTARGVMYLHQDSKLRIIHRDLKASN 295
A G+ YL +SK IHRDL A N
Sbjct: 220 GDAAAGMEYL--ESKC-CIHRDLAARN 243
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + KL+H LV
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 65
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M SL F+ E K L + +
Sbjct: 66 QLY-AVVSEEPIYIVTEYMSKGSLLDFL-------------KGEMGKYLRLPQLVDMAAQ 111
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 112 IASGMAYVE---RMNYVHRDLRAAN 133
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M SL F+ E K L + +
Sbjct: 77 QLY-AVVSEEPIYIVTEYMSKGSLLDFL-------------KGEMGKYLRLPQLVDMAAQ 122
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 123 IASGMAYVE---RMNYVHRDLRAAN 144
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 28/140 (20%)
Query: 166 LGEGGFGLVYK--------EIAVKR-LSKISEQGLKELK-NEVILFSKLQHRNLVKLLGC 215
+GEG +G+V K +A+K+ L ++ +K++ E+ L +L+H NLV LL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGV 275
C + + L++EF+ + L+ L L + +D + + F II G G
Sbjct: 93 CKKKKRWYLVFEFVDHTILDD-------LELFPNGLDYQVVQ----KYLFQIINGI--GF 139
Query: 276 MYLHQDSKLRIIHRDLKASN 295
+ H IIHRD+K N
Sbjct: 140 CHSHN-----IIHRDIKPEN 154
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + KL+H LV
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 67
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M SL F+ E K L + +
Sbjct: 68 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-------------KGEMGKYLRLPQLVDMAAQ 113
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 114 IASGMAYVE---RMNYVHRDLRAAN 135
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 158 DNFSINNKLGEGGFGLVYK---------------EIAVKRLSKISEQGLKELKNEVILFS 202
++ N LG+G F ++K E+ +K L K + + S
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67
Query: 203 KLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFEN 241
KL H++LV G C G+E +L+ EF+ SL++++ +N
Sbjct: 68 KLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKN 106
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M SL F+ E K L + +
Sbjct: 77 QLY-AVVSEEPIYIVIEYMSKGSLLDFL-------------KGEMGKYLRLPQLVDMAAQ 122
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 123 IASGMAYVE---RMNYVHRDLRAAN 144
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M SL F+ E K L + +
Sbjct: 77 QLY-AVVSEEPIYIVIEYMSKGSLLDFL-------------KGEMGKYLRLPQLVDMAAQ 122
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 123 IASGMAYVE---RMNYVHRDLRAAN 144
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + KL+H LV
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLV 243
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M SL F+ E K L + +
Sbjct: 244 QLY-AVVSEEPIYIVTEYMSKGSLLDFL-------------KGEMGKYLRLPQLVDMAAQ 289
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 290 IASGMAYVE---RMNYVHRDLRAAN 311
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 30/148 (20%)
Query: 159 NFSINNKLGEGGFG--------LVYKEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 208
N+ + +G+G F L KE+AVK + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 209 LVKLLGCCIQGEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHI 267
+VKL I+ E+ L L+ E+ + ++ V R K + +F
Sbjct: 75 IVKLFE-VIETEKTLYLVXEYASGGEVFDYL------------VAHGRXKEKEARAKFRQ 121
Query: 268 ICGTARGVMYLHQDSKLRIIHRDLKASN 295
I V Y HQ I+HRDLKA N
Sbjct: 122 IVS---AVQYCHQKF---IVHRDLKAEN 143
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 30/148 (20%)
Query: 159 NFSINNKLGEGGFG--------LVYKEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 208
N+ + +G+G F L KE+AV+ + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 209 LVKLLGCCIQGEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHI 267
+VKL I+ E+ L L+ E+ + ++ V R K + +F
Sbjct: 75 IVKLFE-VIETEKTLYLVMEYASGGEVFDYL------------VAHGRMKEKEARAKFRQ 121
Query: 268 ICGTARGVMYLHQDSKLRIIHRDLKASN 295
I V Y HQ I+HRDLKA N
Sbjct: 122 IVS---AVQYCHQKF---IVHRDLKAEN 143
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 39/169 (23%)
Query: 144 ELPLFELATIANATDNFSINNKLGEGGFGLVYK-----------EIAVKRLSK---ISEQ 189
E PL L + D + KLG+G FG+V + +AVK L +
Sbjct: 5 EGPLQSLTCLIGEKD-LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE 63
Query: 190 GLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFE---NFVLTL 246
+ + EV L HRNL++L G + K ++ E P SL + + +F+L
Sbjct: 64 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT 122
Query: 247 MRSFVDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + Q A G+ YL +SK R IHRDL A N
Sbjct: 123 LSRYAVQ-----------------VAEGMGYL--ESK-RFIHRDLAARN 151
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 39/169 (23%)
Query: 144 ELPLFELATIANATDNFSINNKLGEGGFGLVYK-----------EIAVKRLSK---ISEQ 189
E PL L + D + KLG+G FG+V + +AVK L +
Sbjct: 5 EGPLQSLTCLIGEKD-LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE 63
Query: 190 GLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFE---NFVLTL 246
+ + EV L HRNL++L G + K ++ E P SL + + +F+L
Sbjct: 64 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT 122
Query: 247 MRSFVDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + Q A G+ YL +SK R IHRDL A N
Sbjct: 123 LSRYAVQ-----------------VAEGMGYL--ESK-RFIHRDLAARN 151
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 30/148 (20%)
Query: 159 NFSINNKLGEGGFG--------LVYKEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 208
N+ + +G+G F L KE+AV+ + K ++ L++L EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 209 LVKLLGCCIQGEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHI 267
+VKL I+ E+ L L+ E+ + ++ V R K + +F
Sbjct: 75 IVKLFE-VIETEKTLYLVMEYASGGEVFDYL------------VAHGRMKEKEARAKFRQ 121
Query: 268 ICGTARGVMYLHQDSKLRIIHRDLKASN 295
I V Y HQ I+HRDLKA N
Sbjct: 122 IVS---AVQYCHQKF---IVHRDLKAEN 143
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 30/125 (24%)
Query: 178 IAVKRL-SKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNS 236
+A+K L + +++ ++ +E + + H N++ L G + + ++I E+M N SL++
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 237 FIFENFVLTLMRSFVDQERCKILDWSKRFHIIC------GTARGVMYLHQDSKLRIIHRD 290
F+ +N RF +I G G+ YL S + +HRD
Sbjct: 120 FLRKN--------------------DGRFTVIQLVGMLRGIGSGMKYL---SDMSAVHRD 156
Query: 291 LKASN 295
L A N
Sbjct: 157 LAARN 161
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 31/153 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEI--------AVKRLSK-----ISEQ-GLKELKNEVILFS 202
T F K+G G FG V+K + A+KR K + EQ L+E+ +L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG- 66
Query: 203 KLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWS 262
QH ++V+ + + L+ E+ SL I EN+ +M F + E +L
Sbjct: 67 --QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY--RIMSYFKEAELKDLL--- 119
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
RG+ Y+H + ++H D+K SN
Sbjct: 120 ------LQVGRGLRYIH---SMSLVHMDIKPSN 143
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 31/153 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEI--------AVKRLSK-----ISEQ-GLKELKNEVILFS 202
T F K+G G FG V+K + A+KR K + EQ L+E+ +L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG- 66
Query: 203 KLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWS 262
QH ++V+ + + L+ E+ SL I EN+ +M F + E +L
Sbjct: 67 --QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY--RIMSYFKEAELKDLL--- 119
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
RG+ Y+H + ++H D+K SN
Sbjct: 120 ------LQVGRGLRYIH---SMSLVHMDIKPSN 143
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 45/149 (30%)
Query: 165 KLGEGGFGLVYK-------EIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLGC 215
K+GEG +G+VYK A+K RL K E E+ + +L+H N+VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL--- 65
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD---------WSKRFH 266
Y+ + K +FE+ +DQ+ K+LD +K F
Sbjct: 66 ----------YDVIHTKKRLVLVFEH---------LDQDLKKLLDVCEGGLESVTAKSF- 105
Query: 267 IICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ G+ Y H R++HRDLK N
Sbjct: 106 -LLQLLNGIAYCHDR---RVLHRDLKPQN 130
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 45/149 (30%)
Query: 165 KLGEGGFGLVYK-------EIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLGC 215
K+GEG +G+VYK A+K RL K E E+ + +L+H N+VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL--- 65
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD---------WSKRFH 266
Y+ + K +FE+ +DQ+ K+LD +K F
Sbjct: 66 ----------YDVIHTKKRLVLVFEH---------LDQDLKKLLDVCEGGLESVTAKSF- 105
Query: 267 IICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ G+ Y H R++HRDLK N
Sbjct: 106 -LLQLLNGIAYCHDR---RVLHRDLKPQN 130
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + KL+H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M SL F+ E K L + +
Sbjct: 243 QLY-AVVSEEPIYIVGEYMSKGSLLDFL-------------KGETGKYLRLPQLVDMAAQ 288
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 289 IASGMAYVE---RMNYVHRDLRAAN 310
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 45/149 (30%)
Query: 165 KLGEGGFGLVYK-------EIAVK--RLSKISEQGLKELKNEVILFSKLQHRNLVKLLGC 215
K+GEG +G+VYK A+K RL K E E+ + +L+H N+VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL--- 65
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD---------WSKRFH 266
Y+ + K +FE+ +DQ+ K+LD +K F
Sbjct: 66 ----------YDVIHTKKRLVLVFEH---------LDQDLKKLLDVCEGGLESVTAKSF- 105
Query: 267 IICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ G+ Y H R++HRDLK N
Sbjct: 106 -LLQLLNGIAYCHDR---RVLHRDLKPQN 130
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 31/153 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEI--------AVKRLSK-----ISEQ-GLKELKNEVILFS 202
T F K+G G FG V+K + A+KR K + EQ L+E+ +L
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG- 68
Query: 203 KLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWS 262
QH ++V+ + + L+ E+ SL I EN+ +M F + E +L
Sbjct: 69 --QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY--RIMSYFKEAELKDLL--- 121
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
RG+ Y+H + ++H D+K SN
Sbjct: 122 ------LQVGRGLRYIH---SMSLVHMDIKPSN 145
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYKEIAVKRLSKI-------------SEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG VYK + + K+ S + KE+ +E + + + + ++ +L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 117 LGICLTSTVQ-LITQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 161
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 162 KGMNYLEDR---RLVHRDLAARN 181
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 31/153 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEI--------AVKRLSK-----ISEQ-GLKELKNEVILFS 202
T F K+G G FG V+K + A+KR K + EQ L+E+ +L
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG- 64
Query: 203 KLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWS 262
QH ++V+ + + L+ E+ SL I EN+ +M F + E +L
Sbjct: 65 --QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY--RIMSYFKEAELKDLL--- 117
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
RG+ Y+H + ++H D+K SN
Sbjct: 118 ------LQVGRGLRYIH---SMSLVHMDIKPSN 141
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 178 IAVKRL-SKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNS 236
+A+K L + +++ ++ +E + + H N++ L G + + ++I E+M N SL++
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 237 FIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
F+ +N + V R G G+ YL S + +HRDL A N
Sbjct: 99 FLRKNDGRFTVIQLVGMLR--------------GIGSGMKYL---SDMSYVHRDLAARN 140
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 178 IAVKRL-SKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNS 236
+A+K L + +++ ++ +E + + H N++ L G + + ++I E+M N SL++
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 237 FIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
F+ +N + V R G G+ YL S + +HRDL A N
Sbjct: 105 FLRKNDGRFTVIQLVGMLR--------------GIGSGMKYL---SDMSYVHRDLAARN 146
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 75/155 (48%), Gaps = 29/155 (18%)
Query: 150 LATIANATDNFSINNKLGEGGFGLVY--------KEIAVKRLSKISEQGLKELK-NEVIL 200
+ ++ + ++ K+G+G G VY +E+A+++++ + +Q KEL NE+++
Sbjct: 13 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINEILV 71
Query: 201 FSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+ ++ N+V L + G+E ++ E++ SL + E C +D
Sbjct: 72 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--------------C--MD 115
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + + + +LH + ++IHR++K+ N
Sbjct: 116 EGQIAAVCRECLQALEFLHSN---QVIHRNIKSDN 147
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
L G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 90 LGICLTSTVQ-LIMQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 134
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 135 KGMNYLEDR---RLVHRDLAARN 154
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 60/146 (41%), Gaps = 36/146 (24%)
Query: 166 LGEGGFGLVY------------KEIAVKRL-SKISEQGLKELKNEVILFSKLQHRNLVKL 212
LGEG FG V + +AVK L + Q K E+ + L H +++K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 213 LGCCIQ-GEEKL-LIYEFMPNKSLNSFIFENFV-LTLMRSFVDQERCKILDWSKRFHIIC 269
GCC G L L+ E++P SL ++ + + L + F Q IC
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ--------------IC 144
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
G+ YLH IHRDL A N
Sbjct: 145 ---EGMAYLHAQ---HYIHRDLAARN 164
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
L G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 127
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 128 KGMNYLEDR---RLVHRDLAARN 147
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 27/147 (18%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSKISEQGLK-ELKNEVILFSKLQHRN 208
D + + LG G F V K +A+K ++K + +G + ++NE+ + K++H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN 77
Query: 209 LVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHII 268
+V L G LI + + L I E T ER D S+ +I
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT--------ER----DASR---LI 122
Query: 269 CGTARGVMYLHQDSKLRIIHRDLKASN 295
V YLH L I+HRDLK N
Sbjct: 123 FQVLDAVKYLHD---LGIVHRDLKPEN 146
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 27/147 (18%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSKISEQGLK-ELKNEVILFSKLQHRN 208
D + + LG G F V K +A+K ++K + +G + ++NE+ + K++H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 209 LVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHII 268
+V L G LI + + L I E T ER D S+ +I
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT--------ER----DASR---LI 122
Query: 269 CGTARGVMYLHQDSKLRIIHRDLKASN 295
V YLH L I+HRDLK N
Sbjct: 123 FQVLDAVKYLHD---LGIVHRDLKPEN 146
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYK------------EIAVKRLSK-ISEQGLKELKNEVILFSKLQHRNLVKL 212
L G FG VYK +A+K L + S + KE+ +E + + + + ++ +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C+ + LI + MP L ++ E+ + + + +L+W + A
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREH------KDNIGSQY--LLNWCVQI------A 134
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL R++HRDL A N
Sbjct: 135 KGMNYLEDR---RLVHRDLAARN 154
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + K++H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLV 76
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M SL F+ E K L + +
Sbjct: 77 QLY-AVVSEEPIYIVTEYMSKGSLLDFL-------------KGEMGKYLRLPQLVDMAAQ 122
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 123 IASGMAYVE---RMNYVHRDLRAAN 144
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M SL F+ E K L + +
Sbjct: 77 QLYAV-VSEEPIYIVCEYMSKGSLLDFL-------------KGEMGKYLRLPQLVDMAAQ 122
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 123 IASGMAYVE---RMNYVHRDLRAAN 144
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 58/151 (38%), Gaps = 31/151 (20%)
Query: 162 INNKLGEGGFGLVY--------KEIAVKRLSKISEQGLKELKNEVILFSKLQ-HRNLVKL 212
+ L EGGF VY +E A+KRL E+ + + EV KL H N+V+
Sbjct: 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF 91
Query: 213 LGCCIQGEEK--------LLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
G+E+ LL+ E + L+ E L
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTELCKGQ-------------LVEFLKKMESRGPLSCDTV 138
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I T R V ++H+ K IIHRDLK N
Sbjct: 139 LKIFYQTCRAVQHMHRQ-KPPIIHRDLKVEN 168
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 157 TDNFSINNKLGEGGFGLVYK--------EIAVKRLS--KISEQGLKELKNEVILFSKLQH 206
TD + + +G+G F +V + E A K ++ K+S + ++L+ E + L+H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 207 RNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFH 266
N+V+L + L+++ + L FE+ V S D C
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHC---------- 108
Query: 267 IICGTARGVMYLHQDSKLRIIHRDLKASN 295
I V++ HQ + ++HRDLK N
Sbjct: 109 -IQQILEAVLHCHQ---MGVVHRDLKPEN 133
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 156 ATDNFSINNKLGEGGFGLVYK-----------EIAVKRLSKISEQGLKE-LKNEVILFSK 203
A ++ +N LGEG FG VY+ +AVK K KE +E ++
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFEN 241
L H ++VKL+G I+ E +I E P L ++ N
Sbjct: 82 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERN 118
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + KL+H LV
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M SL F+ E K L + +
Sbjct: 74 QLY-AVVSEEPIYIVTEYMNKGSLLDFL-------------KGETGKYLRLPQLVDMSAQ 119
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 120 IASGMAYVE---RMNYVHRDLRAAN 141
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 156 ATDNFSINNKLGEGGFGLVYK-----------EIAVKRLSKISEQGLKE-LKNEVILFSK 203
A ++ +N LGEG FG VY+ +AVK K KE +E ++
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFEN 241
L H ++VKL+G I+ E +I E P L ++ N
Sbjct: 66 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERN 102
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 38/148 (25%)
Query: 165 KLGEGGFGLVYK-----------EIAVKRLSK---ISEQGLKELKNEVILFSKLQHRNLV 210
KLG+G FG+V + +AVK L + + + EV L HRNL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFE---NFVLTLMRSFVDQERCKILDWSKRFHI 267
+L G + K ++ E P SL + + +F+L + + Q
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-------------- 123
Query: 268 ICGTARGVMYLHQDSKLRIIHRDLKASN 295
A G+ YL +SK R IHRDL A N
Sbjct: 124 ---VAEGMGYL--ESK-RFIHRDLAARN 145
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + KL+H LV
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M SL F+ E K L + +
Sbjct: 74 QLY-AVVSEEPIYIVTEYMNKGSLLDFL-------------KGETGKYLRLPQLVDMSAQ 119
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 120 IASGMAYVE---RMNYVHRDLRAAN 141
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 156 ATDNFSINNKLGEGGFGLVYK-----------EIAVKRLSKISEQGLKE-LKNEVILFSK 203
A ++ +N LGEG FG VY+ +AVK K KE +E ++
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFEN 241
L H ++VKL+G I+ E +I E P L ++ N
Sbjct: 70 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERN 106
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 38/154 (24%)
Query: 159 NFSINNKLGEGGFGLVYK-----------EIAVKRLSK---ISEQGLKELKNEVILFSKL 204
+ + KLG+G FG+V + +AVK L + + + EV L
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFE---NFVLTLMRSFVDQERCKILDW 261
HRNL++L G + K ++ E P SL + + +F+L + + Q
Sbjct: 69 DHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-------- 119
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
A G+ YL +SK R IHRDL A N
Sbjct: 120 ---------VAEGMGYL--ESK-RFIHRDLAARN 141
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 27/147 (18%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSKISEQGLK-ELKNEVILFSKLQHRN 208
D + + LG G F V K +A+K ++K + +G + ++NE+ + K++H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 209 LVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHII 268
+V L G LI + + L I E T ER D S+ +I
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT--------ER----DASR---LI 122
Query: 269 CGTARGVMYLHQDSKLRIIHRDLKASN 295
V YLH L I+HRDLK N
Sbjct: 123 FQVLDAVKYLHD---LGIVHRDLKPEN 146
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 34/156 (21%)
Query: 155 NATDNFSINNKLGEGGFGLVYK--------EIAVK-----RLSKISEQGL--KELKNEVI 199
+ D++ + +LG G F +V K E A K RLS S +G+ +E++ EV
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSS-SRRGVSREEIEREVN 67
Query: 200 LFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKIL 259
+ +++H N++ L + +LI E + L F+ E LT Q +IL
Sbjct: 68 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLT--EDEATQFLKQIL 125
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
D GV YLH RI H DLK N
Sbjct: 126 D-------------GVHYLHSK---RIAHFDLKPEN 145
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 27/147 (18%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSKISEQGLK-ELKNEVILFSKLQHRN 208
D + + LG G F V K +A+K ++K + +G + ++NE+ + K++H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 209 LVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHII 268
+V L G LI + + L I E T ER D S+ +I
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT--------ER----DASR---LI 122
Query: 269 CGTARGVMYLHQDSKLRIIHRDLKASN 295
V YLH L I+HRDLK N
Sbjct: 123 FQVLDAVKYLHD---LGIVHRDLKPEN 146
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 63/146 (43%), Gaps = 36/146 (24%)
Query: 166 LGEGGFGLVY------------KEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLVKL 212
LGEG FG V + +AVK L + L+ + E+ + L H ++VK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 213 LGCCI-QGEEKL-LIYEFMPNKSLNSFIFENFV-LTLMRSFVDQERCKILDWSKRFHIIC 269
GCC QGE+ + L+ E++P SL ++ + V L + F Q IC
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ--------------IC 122
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
G+ YLH IHR L A N
Sbjct: 123 ---EGMAYLHAQ---HYIHRALAARN 142
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 38/154 (24%)
Query: 159 NFSINNKLGEGGFGLVYK-----------EIAVKRLSK---ISEQGLKELKNEVILFSKL 204
+ + KLG+G FG+V + +AVK L + + + EV L
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFE---NFVLTLMRSFVDQERCKILDW 261
HRNL++L G + K ++ E P SL + + +F+L + + Q
Sbjct: 69 DHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-------- 119
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
A G+ YL +SK R IHRDL A N
Sbjct: 120 ---------VAEGMGYL--ESK-RFIHRDLAARN 141
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 29/154 (18%)
Query: 155 NATDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN---EVILFSK 203
N NF I K+G G F VY+ +A+K++ K + E+ L +
Sbjct: 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERC--KILDW 261
L H N++K I+ E ++ E L+ I + F Q+R + W
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMI---------KHFKKQKRLIPERTVW 139
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
K F +C H S+ R++HRD+K +N
Sbjct: 140 -KYFVQLCSALE-----HMHSR-RVMHRDIKPAN 166
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSK-ISEQGLKELKNEVILFSK 203
+ ++ +LG+G FG+VY+ +AVK +++ S + E NE +
Sbjct: 18 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 77
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSK 263
++V+LLG +G+ L++ E M + L S++ +L + +
Sbjct: 78 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-----RSLRPEAENNPGRPPPTLQE 132
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ A G+ YL+ + +HR+L A N
Sbjct: 133 MIQMAAEIADGMAYLNAK---KFVHRNLAARN 161
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSK-ISEQGLKELKNEVILFSK 203
+ ++ +LG+G FG+VY+ +AVK +++ S + E NE +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSK 263
++V+LLG +G+ L++ E M + L S++ +L + +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-----RSLRPEAENNPGRPPPTLQE 131
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ A G+ YL+ + +HR+L A N
Sbjct: 132 MIQMAAEIADGMAYLNAK---KFVHRNLAARN 160
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 35/156 (22%)
Query: 157 TDNFSINNKLGEGGFGLVY--------KEIAVKRLSK--------ISEQGLKELKNEVIL 200
+ +S + LG G FG V+ KE+ VK + K I + L ++ E+ +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 201 FSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTL-MRSFVDQERCKIL 259
S+++H N++K+L I+E N+ + E L + +F+D R L
Sbjct: 83 LSRVEHANIIKVLD----------IFE---NQGFFQLVMEKHGSGLDLFAFID--RHPRL 127
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
D +I V YL IIHRD+K N
Sbjct: 128 DEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDEN 160
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 38/154 (24%)
Query: 159 NFSINNKLGEGGFGLVYK-----------EIAVKRLSK---ISEQGLKELKNEVILFSKL 204
+ + KLG+G FG+V + +AVK L + + + EV L
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 72
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFE---NFVLTLMRSFVDQERCKILDW 261
HRNL++L G + K ++ E P SL + + +F+L + + Q
Sbjct: 73 DHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-------- 123
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
A G+ YL +SK R IHRDL A N
Sbjct: 124 ---------VAEGMGYL--ESK-RFIHRDLAARN 145
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 63/146 (43%), Gaps = 36/146 (24%)
Query: 166 LGEGGFGLVY------------KEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLVKL 212
LGEG FG V + +AVK L + L+ + E+ + L H ++VK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 213 LGCCI-QGEEKL-LIYEFMPNKSLNSFIFENFV-LTLMRSFVDQERCKILDWSKRFHIIC 269
GCC QGE+ + L+ E++P SL ++ + V L + F Q IC
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ--------------IC 121
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
G+ YLH IHR L A N
Sbjct: 122 ---EGMAYLHAQ---HYIHRALAARN 141
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 38/154 (24%)
Query: 159 NFSINNKLGEGGFGLVYK-----------EIAVKRLSK---ISEQGLKELKNEVILFSKL 204
+ + KLG+G FG+V + +AVK L + + + EV L
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 205 QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFE---NFVLTLMRSFVDQERCKILDW 261
HRNL++L G + K ++ E P SL + + +F+L + + Q
Sbjct: 69 DHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-------- 119
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
A G+ YL +SK R IHRDL A N
Sbjct: 120 ---------VAEGMGYL--ESK-RFIHRDLAARN 141
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 62/143 (43%), Gaps = 34/143 (23%)
Query: 166 LGEGGFGLVYK--------EIAVKRLSKISEQG--LKELKNEVILFSKLQHRNLVKLLGC 215
LG+G FG V K E AVK ++K S + + EV L KL H N++KL
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL--- 86
Query: 216 CIQGEEKLLIYEFMPNKSLNSFIFENFVLT---LMRSFVDQERCKILDWSKRFHIICGTA 272
+E + + S SF + T L + ++R D ++ II
Sbjct: 87 ----------FEILEDSS--SFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVF 131
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
G+ Y+H K I+HRDLK N
Sbjct: 132 SGITYMH---KHNIVHRDLKPEN 151
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 35/145 (24%)
Query: 169 GGFGLVYKE------IAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGE-- 220
G FG V+K +AVK +Q + + E+ ++H NL++ + +G
Sbjct: 26 GRFGCVWKAQLMNDFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRGSNL 84
Query: 221 --EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVMYL 278
E LI F SL ++ N I+ W++ H+ +RG+ YL
Sbjct: 85 EVELWLITAFHDKGSLTDYLKGN----------------IITWNELCHVAETMSRGLSYL 128
Query: 279 HQD--------SKLRIIHRDLKASN 295
H+D K I HRD K+ N
Sbjct: 129 HEDVPWCRGEGHKPSIAHRDFKSKN 153
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 34/153 (22%)
Query: 158 DNFSINNKLGEGGFGLVYK--------EIAVK-----RLSKISEQGL--KELKNEVILFS 202
D++ + +LG G F +V K E A K RLS S +G+ +E++ EV +
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSS-SRRGVSREEIEREVNILR 63
Query: 203 KLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWS 262
+++H N++ L + +LI E + L F+ E LT Q +ILD
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLT--EDEATQFLKQILD-- 119
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
GV YLH RI H DLK N
Sbjct: 120 -----------GVHYLHSK---RIAHFDLKPEN 138
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 29/159 (18%)
Query: 158 DNFSINNKLGEGGFGLVY-------------KEIAVKRLSK-ISEQGLKELKNEV-ILFS 202
D ++ LG G FG V + +AVK L + + + L +E+ IL
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 203 KLQHRNLVKLLGCCIQ-GEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKIL-- 259
H N+V LLG C + G ++I EF +L++++ FV + + L
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK-----RNEFVPYKTPEDLYK 142
Query: 260 DWSKRFHIIC---GTARGVMYLHQDSKLRIIHRDLKASN 295
D+ H+IC A+G+ +L + + IHRDL A N
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 178
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 32/152 (21%)
Query: 158 DNFSINNKLGEGGFGLVYK--------EIAVKRLSK----ISEQGL--KELKNEVILFSK 203
D++ + +LG G F +V K E A K + K S +G+ +E++ EV + +
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSK 263
++H N++ L + +LI E + L F+ E LT Q +ILD
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLT--EDEATQFLKQILD--- 140
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
GV YLH RI H DLK N
Sbjct: 141 ----------GVHYLHSK---RIAHFDLKPEN 159
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 34/152 (22%)
Query: 157 TDNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQG--LKELKNEVILFSKLQH 206
+ ++I LG+G FG V K E AVK ++K S + + EV L KL H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 207 RNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLT---LMRSFVDQERCKILDWSK 263
N++KL +E + + S SF + T L + ++R D ++
Sbjct: 81 PNIMKL-------------FEILEDSS--SFYIVGELYTGGELFDEIIKRKRFSEHDAAR 125
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
II G+ Y+H K I+HRDLK N
Sbjct: 126 ---IIKQVFSGITYMH---KHNIVHRDLKPEN 151
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 34/151 (22%)
Query: 158 DNFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQG--LKELKNEVILFSKLQHR 207
+ ++I LG+G FG V K E AVK ++K S + + EV L KL H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 208 NLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLT---LMRSFVDQERCKILDWSKR 264
N++KL +E + + S SF + T L + ++R D ++
Sbjct: 82 NIMKL-------------FEILEDSS--SFYIVGELYTGGELFDEIIKRKRFSEHDAAR- 125
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
II G+ Y+H K I+HRDLK N
Sbjct: 126 --IIKQVFSGITYMH---KHNIVHRDLKPEN 151
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYKEIAVKRLSKI-------------SEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG V+K + + I Q + + + ++ L H ++V+L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C G L+ +++P SL + ++ R + + +L+W + A
Sbjct: 81 LGLC-PGSSLQLVTQYLPLGSLLDHVRQH------RGALGPQL--LLNWGVQI------A 125
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL + ++HR+L A N
Sbjct: 126 KGMYYLEEHG---MVHRNLAARN 145
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 26/156 (16%)
Query: 148 FELATIANATDNFSINNKLGEGGFGLVYKEI--------AVKRLSKISEQGLKELKNEVI 199
F+ +T + +++ N +G G +G V + A K++ K + + K E+
Sbjct: 16 FQGSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIE 75
Query: 200 LFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKIL 259
+ L H N+++L + L+ E L FE V R F + + +I+
Sbjct: 76 IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL----FERVVHK--RVFRESDAARIM 129
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
V Y H KL + HRDLK N
Sbjct: 130 K---------DVLSAVAYCH---KLNVAHRDLKPEN 153
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 33/149 (22%)
Query: 160 FSINNKLGEGGFGLVYKEI--------AVKRLSKISEQGLKELKN--EVILFSKLQ-HRN 208
+ + KLG+G +G+V+K I AVK++ + + E+++ ++L H N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 209 LVKLLGCCIQGEEK--LLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFH 266
+V LL ++ L++++M L++ I R IL+ + +
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYM-ETDLHAVI----------------RANILEPVHKQY 113
Query: 267 IICGTARGVMYLHQDSKLRIIHRDLKASN 295
++ + + YLH ++HRD+K SN
Sbjct: 114 VVYQLIKVIKYLHSGG---LLHRDMKPSN 139
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 31/143 (21%)
Query: 166 LGEGGFGLVYKEIAVKRLSKI-------------SEQGLKELKNEVILFSKLQHRNLVKL 212
LG G FG V+K + + I Q + + + ++ L H ++V+L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 213 LGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTA 272
LG C G L+ +++P SL + ++ R + + +L+W + A
Sbjct: 99 LGLC-PGSSLQLVTQYLPLGSLLDHVRQH------RGALGPQL--LLNWGVQI------A 143
Query: 273 RGVMYLHQDSKLRIIHRDLKASN 295
+G+ YL + ++HR+L A N
Sbjct: 144 KGMYYLEEHG---MVHRNLAARN 163
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 44/165 (26%)
Query: 158 DNFSINNKLGEGGFGLV-------------YKEIAVKRLSKISEQG-----LKELKNEVI 199
D ++ LG G FG V + +AVK L + + + ELK I
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK---I 83
Query: 200 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMPNKSLNSFIFE---NFVL--TLMRSFVDQ 253
L H N+V LLG C + G ++I EF +L++++ FV L + F+
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 254 ERCKILDWSKRFHIIC---GTARGVMYLHQDSKLRIIHRDLKASN 295
E H+IC A+G+ +L + + IHRDL A N
Sbjct: 144 E-----------HLICYSFQVAKGMEFL---ASRKXIHRDLAARN 174
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 158 DNFSINNKLGEGGFGLVY-------------KEIAVKRLSKISEQG-----LKELKNEVI 199
D + LG G FG V + +AVK L + + + ELK I
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 120
Query: 200 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI 258
L H N+V LLG C + G ++I EF +L++++ + ++ K
Sbjct: 121 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK- 179
Query: 259 LDWSKRFHIIC---GTARGVMYLHQDSKLRIIHRDLKASN 295
D+ H+IC A+G+ +L + + IHRDL A N
Sbjct: 180 -DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 215
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 158 DNFSINNKLGEGGFGLVY-------------KEIAVKRLSK-ISEQGLKELKNEV-ILFS 202
D + LG G FG V + +AVK L + + + L +E+ IL
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 203 KLQHRNLVKLLGCCIQ-GEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
H N+V LLG C + G ++I EF +L++++ + ++ K D+
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DF 144
Query: 262 SKRFHIIC---GTARGVMYLHQDSKLRIIHRDLKASN 295
H+IC A+G+ +L + + IHRDL A N
Sbjct: 145 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 178
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M L F+ E K L + +
Sbjct: 77 QLYAV-VSEEPIYIVMEYMSKGCLLDFL-------------KGEMGKYLRLPQLVDMAAQ 122
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 123 IASGMAYVE---RMNYVHRDLRAAN 144
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 42/161 (26%)
Query: 153 IANATDNFSINNKLGEGGFGLV----YKE----IAVKRLSKISEQ--GLKELKNEVILFS 202
+ N + +F + + LGEG +G+V +K +A+K++ + L+ L+ E+ +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 203 KLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENF-----VLTLMRSFVDQERC- 256
+H N++ + IQ + FENF + LM++ D R
Sbjct: 65 HFKHENIITIFN--IQRPDS----------------FENFNEVYIIQELMQT--DLHRVI 104
Query: 257 --KILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
++L + I T R V LH + +IHRDLK SN
Sbjct: 105 STQMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSN 142
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 158 DNFSINNKLGEGGFGLVY-------------KEIAVKRLSK-ISEQGLKELKNEV-ILFS 202
D + LG G FG V + +AVK L + + + L +E+ IL
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 203 KLQHRNLVKLLGCCIQ-GEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
H N+V LLG C + G ++I EF +L++++ + ++ K D+
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DF 144
Query: 262 SKRFHIIC---GTARGVMYLHQDSKLRIIHRDLKASN 295
H+IC A+G+ +L + + IHRDL A N
Sbjct: 145 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 178
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 158 DNFSINNKLGEGGFGLVY-------------KEIAVKRLSKISEQG-----LKELKNEVI 199
D + LG G FG V + +AVK L + + + ELK I
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 83
Query: 200 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI 258
L H N+V LLG C + G ++I EF +L++++ + ++ K
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK- 142
Query: 259 LDWSKRFHIIC---GTARGVMYLHQDSKLRIIHRDLKASN 295
D+ H+IC A+G+ +L + + IHRDL A N
Sbjct: 143 -DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 178
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 42/161 (26%)
Query: 153 IANATDNFSINNKLGEGGFGLV----YKE----IAVKRLSKISEQ--GLKELKNEVILFS 202
+ N + +F + + LGEG +G+V +K +A+K++ + L+ L+ E+ +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 203 KLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENF-----VLTLMRSFVDQERC- 256
+H N++ + IQ + FENF + LM++ D R
Sbjct: 65 HFKHENIITIFN--IQRPDS----------------FENFNEVYIIQELMQT--DLHRVI 104
Query: 257 --KILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
++L + I T R V LH + +IHRDLK SN
Sbjct: 105 STQMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSN 142
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 42/153 (27%)
Query: 165 KLGEGGFGLVYKE---------IAVKRLS-KISEQG--LKELKNEVIL--FSKLQHRNLV 210
++GEG +G V+K +A+KR+ + E+G L ++ +L +H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L C LTL+ VDQ+ LD +
Sbjct: 78 RLFDVCTVSRTD-----------------RETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 120
Query: 271 TA--------RGVMYLHQDSKLRIIHRDLKASN 295
T RG+ +LH R++HRDLK N
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQN 150
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
++ + KLG+G FG V+ +A+K L K + E + KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+L + E ++ E+M L F+ E K L + +
Sbjct: 77 QLYAV-VSEEPIYIVTEYMSKGCLLDFL-------------KGEMGKYLRLPQLVDMAAQ 122
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
A G+ Y+ ++ +HRDL+A+N
Sbjct: 123 IASGMAYVE---RMNYVHRDLRAAN 144
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 42/161 (26%)
Query: 153 IANATDNFSINNKLGEGGFGLV----YKE----IAVKRLSKISEQ--GLKELKNEVILFS 202
+ N + +F + + LGEG +G+V +K +A+K++ + L+ L+ E+ +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 203 KLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENF-----VLTLMRSFVDQERC- 256
+H N++ + IQ + FENF + LM++ D R
Sbjct: 65 HFKHENIITIFN--IQRPDS----------------FENFNEVYIIQELMQT--DLHRVI 104
Query: 257 --KILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
++L + I T R V LH + +IHRDLK SN
Sbjct: 105 STQMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSN 142
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 158 DNFSINNKLGEGGFGLVY-------------KEIAVKRLSKISEQG-----LKELKNEVI 199
D + LG G FG V + +AVK L + + + ELK I
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 74
Query: 200 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI 258
L H N+V LLG C + G ++I EF +L++++ + ++ K
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK- 133
Query: 259 LDWSKRFHIIC---GTARGVMYLHQDSKLRIIHRDLKASN 295
D+ H+IC A+G+ +L + + IHRDL A N
Sbjct: 134 -DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 169
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 28/146 (19%)
Query: 160 FSINNKLGEGGFGLVYK--------EIAVKRLS--KISEQGLKELKNEVILFSKLQHRNL 209
+ + +LG+G F +V + E A K ++ K+S + ++L+ E + L+H N+
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
V+L + LI++ + L FE+ V S D C I
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHC-----------IQ 128
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
V++ HQ + ++HRDLK N
Sbjct: 129 QILEAVLHCHQ---MGVVHRDLKPEN 151
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 35/154 (22%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSKI------SEQGLKELKNEVILFSK 203
D + I +G G +G+V +++A+K++ +++ L+ELK +
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK----ILKH 110
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ--ERCKILDW 261
+H N++ + K ++ +P S VL LM S + Q + L
Sbjct: 111 FKHDNIIAI---------KDILRPTVPYGEFKSVYV---VLDLMESDLHQIIHSSQPLTL 158
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + RG+ Y+H ++IHRDLK SN
Sbjct: 159 EHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSN 189
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 158 DNFSINNKLGEGGFGLVY-------------KEIAVKRLSK-ISEQGLKELKNEV-ILFS 202
D + LG G FG V + +AVK L + + + L +E+ IL
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 203 KLQHRNLVKLLGCCIQ-GEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
H N+V LLG C + G ++I EF +L++++ + ++ K D+
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DF 135
Query: 262 SKRFHIIC---GTARGVMYLHQDSKLRIIHRDLKASN 295
H+IC A+G+ +L + + IHRDL A N
Sbjct: 136 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 169
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 158 DNFSINNKLGEGGFGLVY-------------KEIAVKRLSK-ISEQGLKELKNEV-ILFS 202
D + LG G FG V + +AVK L + + + L +E+ IL
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 203 KLQHRNLVKLLGCCIQ-GEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDW 261
H N+V LLG C + G ++I EF +L++++ + ++ K D+
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--DF 135
Query: 262 SKRFHIIC---GTARGVMYLHQDSKLRIIHRDLKASN 295
H+IC A+G+ +L + + IHRDL A N
Sbjct: 136 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 169
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 158 DNFSINNKLGEGGFGLVY-------------KEIAVKRLSKISEQG-----LKELKNEVI 199
D + LG G FG V + +AVK L + + + ELK I
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 74
Query: 200 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI 258
L H N+V LLG C + G ++I EF +L++++ + ++ K
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK- 133
Query: 259 LDWSKRFHIIC---GTARGVMYLHQDSKLRIIHRDLKASN 295
D+ H+IC A+G+ +L + + IHRDL A N
Sbjct: 134 -DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 169
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 62/163 (38%), Gaps = 42/163 (25%)
Query: 155 NATDNFSINNKLGEGGFGLVYKE---------IAVKRLS-KISEQG--LKELKNEVIL-- 200
A + ++GEG +G V+K +A+KR+ + E+G L ++ +L
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 201 FSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+H N+V+L C LTL+ VDQ+ LD
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTD-----------------RETKLTLVFEHVDQDLTTYLD 110
Query: 261 WSKRFHIICGTA--------RGVMYLHQDSKLRIIHRDLKASN 295
+ T RG+ +LH R++HRDLK N
Sbjct: 111 KVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQN 150
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 62/163 (38%), Gaps = 42/163 (25%)
Query: 155 NATDNFSINNKLGEGGFGLVYKE---------IAVKRLS-KISEQG--LKELKNEVIL-- 200
A + ++GEG +G V+K +A+KR+ + E+G L ++ +L
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 201 FSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
+H N+V+L C LTL+ VDQ+ LD
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTD-----------------RETKLTLVFEHVDQDLTTYLD 110
Query: 261 WSKRFHIICGTA--------RGVMYLHQDSKLRIIHRDLKASN 295
+ T RG+ +LH R++HRDLK N
Sbjct: 111 KVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQN 150
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 68/164 (41%), Gaps = 38/164 (23%)
Query: 158 DNFSINNKLGEGGFGLVY-------------KEIAVKRLSKISEQG-----LKELKNEVI 199
D + LG G FG V + +AVK L + + + ELK I
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 85
Query: 200 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI 258
L H N+V LLG C + G ++I EF +L++++ FV +
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK-----RNEFVPYKEAP- 139
Query: 259 LDWSKRF----HIIC---GTARGVMYLHQDSKLRIIHRDLKASN 295
D K F H+IC A+G+ +L + + IHRDL A N
Sbjct: 140 EDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 180
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 27/141 (19%)
Query: 164 NKLGEGGFGLVYKE--------IAVKRLSKISEQGLK-ELKNEVILFSKLQHRNLVKLLG 214
+KLGEG + VYK +A+K + E+G EV L L+H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 215 CCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARG 274
+ L++E++ +K L ++ + + ++ K+ F ++ RG
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYLDD------CGNIINMHNVKLF----LFQLL----RG 112
Query: 275 VMYLHQDSKLRIIHRDLKASN 295
+ Y H+ +++HRDLK N
Sbjct: 113 LAYCHRQ---KVLHRDLKPQN 130
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + + L
Sbjct: 6 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLN 63
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 111
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 112 HQLMA---GVVYLH---GIGITHRDIKPEN 135
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN 62
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 110
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 111 HQLMA---GVVYLH---GIGITHRDIKPEN 134
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 110
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 111 HQLMA---GVVYLH---GIGITHRDIKPEN 134
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 6 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 111
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 112 HQLMA---GVVYLH---GIGITHRDIKPEN 135
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 32/148 (21%)
Query: 166 LGEGGFGLVYK--------EIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCI 217
+G GGFG V+K +KR+ +E+ +E+K +KL H N+V GC
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVK----ALAKLDHVNIVHYNGCWD 74
Query: 218 QGEEKLLIYEFMPNKSLNS---------FIFENFV-LTLMRSFVDQERCKILDWSKRFHI 267
+++ P S + FI F + ++++ R + LD +
Sbjct: 75 G-------FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 268 ICGTARGVMYLHQDSKLRIIHRDLKASN 295
+GV Y+H ++I+RDLK SN
Sbjct: 128 FEQITKGVDYIHSK---KLINRDLKPSN 152
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN 62
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 110
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 111 HQLMA---GVVYLH---GIGITHRDIKPEN 134
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 6 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN 63
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 111
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 112 HQLMA---GVVYLH---GIGITHRDIKPEN 135
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 31/153 (20%)
Query: 154 ANATDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFS 202
A +++ + LGEG +G V ++AV R++ K + + +K E+ +
Sbjct: 1 APFVEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINK 58
Query: 203 KLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWS 262
L H N+VK G +G + L E+ L F+ + D +R
Sbjct: 59 MLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF------ 108
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
FH + GV+YLH + I HRD+K N
Sbjct: 109 --FHQLMA---GVVYLH---GIGITHRDIKPEN 133
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 35/154 (22%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSKI------SEQGLKELKNEVILFSK 203
D + I +G G +G+V +++A+K++ +++ L+ELK +
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK----ILKH 109
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ--ERCKILDW 261
+H N++ + P F VL LM S + Q + L
Sbjct: 110 FKHDNIIAIKDI------------LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL 157
Query: 262 SKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + RG+ Y+H ++IHRDLK SN
Sbjct: 158 EHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSN 188
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 30/148 (20%)
Query: 159 NFSINNKLGEGGFG--------LVYKEIAVKRLSK--ISEQGLKELKNEVILFSKLQHRN 208
N+ + +G+G F L KE+AVK + K ++ L++L EV + L H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 209 LVKLLGCCIQGEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHI 267
+VKL I+ E+ L L+ E+ E F + ++ ++ + +F
Sbjct: 68 IVKLFE-VIETEKTLYLVMEYASGG-------EVFDYLVAHGWMKEKEAR-----AKFRQ 114
Query: 268 ICGTARGVMYLHQDSKLRIIHRDLKASN 295
I V Y HQ I+HRDLKA N
Sbjct: 115 IVS---AVQYCHQKF---IVHRDLKAEN 136
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 23/144 (15%)
Query: 157 TDNFSINNKLGEGGFGL----VYKEIAVKRLSKISEQGLKELKNEV-ILFSKLQHRNLVK 211
TD + + +G G + + ++K ++ KI ++ ++ E+ IL QH N++
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGT 271
L G+ ++ E M L I + F ++E +L F I
Sbjct: 81 LKDVYDDGKYVYVVTELMKGGELLDKILRQ------KFFSEREASAVL-----FTI---- 125
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
+ V YLH ++HRDLK SN
Sbjct: 126 TKTVEYLHAQG---VVHRDLKPSN 146
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 34/149 (22%)
Query: 160 FSINNKLGEGGFGLV-----YKEIAVKRLSKISEQGLKE------LKNEVILFSKLQHRN 208
+ I LGEG FG V YK L IS Q LK+ ++ E+ L+H +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 209 LVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF--H 266
++KL + +++ E+ L +I E +T D +RF
Sbjct: 71 IIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTE-------------DEGRRFFQQ 116
Query: 267 IICGTARGVMYLHQDSKLRIIHRDLKASN 295
IIC + Y H+ +I+HRDLK N
Sbjct: 117 IICA----IEYCHRH---KIVHRDLKPEN 138
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 34/147 (23%)
Query: 164 NKLGEGGFGLV--------YKEIAVKRLSKI--SEQGLKELKNEVILFSKLQHRNLVKLL 213
+G G +G V ++A+K+L + SE K E+ L ++H N++ LL
Sbjct: 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 214 GCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSK----RFH-II 268
F P+++L+ F +F L + F+ + K++ K R ++
Sbjct: 91 DV------------FTPDETLDDFT--DFYLVM--PFMGTDLGKLMKHEKLGEDRIQFLV 134
Query: 269 CGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ Y+H IIHRDLK N
Sbjct: 135 YQMLKGLRYIHAAG---IIHRDLKPGN 158
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 6 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 111
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 112 HQLMA---GVVYLH---GIGITHRDIKPEN 135
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 6 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 111
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 112 HQLMA---GVVYLH---GIGITHRDIKPEN 135
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 6 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 111
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 112 HQLMA---GVVYLH---GIGITHRDIKPEN 135
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 28/149 (18%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVK----------RLSKISEQGLKELKNEVILFSKLQH 206
T+ + + +LG+G F +V + + V K+S + ++L+ E + L+H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 207 RNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFH 266
N+V+L + LI++ + L FE+ V S D C
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHC---------- 115
Query: 267 IICGTARGVMYLHQDSKLRIIHRDLKASN 295
I V++ HQ + ++HR+LK N
Sbjct: 116 -IQQILEAVLHCHQ---MGVVHRNLKPEN 140
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 34/164 (20%)
Query: 148 FELATIANA--TDNFSINNKLGEGGFGLVY--------KEIAVKRLSKISEQGL--KELK 195
F+ A I N DN+ I + +G G +G VY K +A+K+++++ E + K +
Sbjct: 16 FQGAIIKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRIL 75
Query: 196 NEVILFSKLQHRNLVKLLGCCIQGE----EKLLIYEFMPNKSLNSFIFENFVLTLMRSFV 251
E+ + ++L+ +++L I + ++L I + + L +F+ + F+
Sbjct: 76 REITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKK-LFKTPI------FL 128
Query: 252 DQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
++ K I+ G ++H+ IIHRDLK +N
Sbjct: 129 TEQHVKT--------ILYNLLLGEKFIHESG---IIHRDLKPAN 161
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 26/153 (16%)
Query: 151 ATIANATDNFSINNKLGEGGFGLVYKEI--------AVKRLSKISEQGLKELKNEVILFS 202
+T + +++ N +G G +G V + A K++ K + + K E+ +
Sbjct: 2 STKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMK 61
Query: 203 KLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWS 262
L H N+++L + L+ E L FE V R F + + +I+
Sbjct: 62 SLDHPNIIRLYETFEDNTDIYLVMELCTGGEL----FERVVHK--RVFRESDAARIMK-- 113
Query: 263 KRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
V Y H KL + HRDLK N
Sbjct: 114 -------DVLSAVAYCH---KLNVAHRDLKPEN 136
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 57/151 (37%), Gaps = 39/151 (25%)
Query: 160 FSINNKLGEGGFGLVY--------KEIAVKRLSKISEQGLKE-LKNEVILFSKLQHRNLV 210
F LG G F V K AVK + K + +G + ++NE+ + K++H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSL------NSFIFENFVLTLMRSFVDQERCKILDWSKR 264
L L+ + + L F E TL+R +D
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD------------ 131
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
V YLH ++ I+HRDLK N
Sbjct: 132 ---------AVYYLH---RMGIVHRDLKPEN 150
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 110
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 111 HQLMA---GVVYLH---GIGITHRDIKPEN 134
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 110
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 111 HQLMA---GVVYLH---GIGITHRDIKPEN 134
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 110
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 111 HQLMA---GVVYLH---GIGITHRDIKPEN 134
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 110
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 111 HQLMA---GVVYLH---GIGITHRDIKPEN 134
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 6 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 111
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 112 HQLMA---GVVYLH---GIGITHRDIKPEN 135
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 110
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 111 HQLMA---GVVYLH---GIGITHRDIKPEN 134
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 36/166 (21%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLKE-LKNEVILFSK 203
+N LG G FG V ++AVK L + ++ +E L +E+ + ++
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 204 L-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFI-------------FENFVLTLMRS 249
L H N+V LLG C LI+E+ L +++ +EN +
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYEN-----QKR 159
Query: 250 FVDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
++E +L + A+G+ +L S +HRDL A N
Sbjct: 160 LEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARN 202
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 6 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 111
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 112 HQLMA---GVVYLH---GIGITHRDIKPEN 135
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 61/150 (40%), Gaps = 31/150 (20%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 206
++F LGEG F V +E A+K L K I E + + E + S+L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 207 RNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
VKL C Q +EKL + N L +I + + SF E C RF
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETC------TRF 141
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH IIHRDLK N
Sbjct: 142 Y-TAEIVSALEYLHGKG---IIHRDLKPEN 167
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 110
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 111 HQLMA---GVVYLH---GIGITHRDIKPEN 134
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 110
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 111 HQLMA---GVVYLH---GIGITHRDIKPEN 134
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG +G V ++AV R++ K + + +K E+ + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 110
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 111 HQLMA---GVVYLH---GIGITHRDIKPEN 134
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 20/146 (13%)
Query: 160 FSINNKLGEGGFGLVYK--------EIAVKR-LSKISEQGLKELKNEVILFSKLQHRNLV 210
+ + +LG GGFG V + ++A+K+ ++S + + E+ + KL H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILDWSKRFHIIC 269
G +KL PN L E +R +++Q E C L ++
Sbjct: 76 SAREVP-DGLQKL-----APN-DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 128
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH++ RIIHRDLK N
Sbjct: 129 DISSALRYLHEN---RIIHRDLKPEN 151
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 20/146 (13%)
Query: 160 FSINNKLGEGGFGLVYK--------EIAVKR-LSKISEQGLKELKNEVILFSKLQHRNLV 210
+ + +LG GGFG V + ++A+K+ ++S + + E+ + KL H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ-ERCKILDWSKRFHIIC 269
G +KL PN L E +R +++Q E C L ++
Sbjct: 77 SAREVP-DGLQKL-----APN-DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 129
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH++ RIIHRDLK N
Sbjct: 130 DISSALRYLHEN---RIIHRDLKPEN 152
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 27/147 (18%)
Query: 158 DNFSINNKLGEGGFGLVYK--EIAVKRL--SKISEQGLK----ELKNEVILFSKLQHRNL 209
D + I +LG G FG+V++ E A R+ +K +KNE+ + ++L H L
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSL-NSFIFENFVLTLMRSFVDQERCKILDWSKRFHII 268
+ L E +LI EF+ L + E++ ++ +++++ ++
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMS---------EAEVINYMRQ---- 157
Query: 269 CGTARGVMYLHQDSKLRIIHRDLKASN 295
G+ ++H+ S I+H D+K N
Sbjct: 158 --ACEGLKHMHEHS---IVHLDIKPEN 179
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 28/149 (18%)
Query: 157 TDNFSINNKLGEGGFGLVYK--------EIAVKRLS--KISEQGLKELKNEVILFSKLQH 206
TD + + +LG+G F +V + E A K ++ K+S + ++L+ E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 207 RNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFH 266
N+V+L + L+++ + L FE+ V S D C
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHC---------- 108
Query: 267 IICGTARGVMYLHQDSKLRIIHRDLKASN 295
I V + H + I+HRDLK N
Sbjct: 109 -IQQILESVNHCHLNG---IVHRDLKPEN 133
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 28/149 (18%)
Query: 157 TDNFSINNKLGEGGFGLVYK--------EIAVKRLS--KISEQGLKELKNEVILFSKLQH 206
TD + + +LG+G F +V + E A K ++ K+S + ++L+ E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 207 RNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFH 266
N+V+L + L+++ + L FE+ V S D C
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHC---------- 108
Query: 267 IICGTARGVMYLHQDSKLRIIHRDLKASN 295
I V + H + I+HRDLK N
Sbjct: 109 -IQQILESVNHCHLNG---IVHRDLKPEN 133
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 72/156 (46%), Gaps = 32/156 (20%)
Query: 154 ANATDNFSINNKLGEGGFGLVY--------KEIAVKRLSKISEQGL--KELKNEVILFSK 203
+ DN+ I + +G G +G VY K +A+K+++++ E + K + E+ + ++
Sbjct: 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNR 81
Query: 204 LQHRNLVKLLGCCIQGE----EKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKIL 259
L+ +++L I + ++L I + + L +F+ + F+ +E K
Sbjct: 82 LKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKK-LFKTPI------FLTEEHIKT- 133
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I+ G ++H+ IIHRDLK +N
Sbjct: 134 -------ILYNLLLGENFIHESG---IIHRDLKPAN 159
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 56/150 (37%), Gaps = 26/150 (17%)
Query: 154 ANATDNFSINNKLGEGGFGLVY--------KEIAVKRLSKISEQGLKELKNEVILFSKLQ 205
N F LG G F V+ K A+K + K L+NE+ + K++
Sbjct: 5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK 64
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+V L L+ + + L I E V T E+ L
Sbjct: 65 HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYT--------EKDASL------ 110
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I V YLH++ I+HRDLK N
Sbjct: 111 -VIQQVLSAVKYLHENG---IVHRDLKPEN 136
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 25/145 (17%)
Query: 157 TDNFSINNKLGEGGFG----LVYKEIAVKRLSKISEQGLKELKNEV-ILFSKLQHRNLVK 211
+D + + +G G + V+K ++ K+ ++ ++ E+ IL QH N++
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIIT 85
Query: 212 LLGCCIQGEEKLLIYEFMPNKSL-NSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
L G+ L+ E M L + + + F SFV H I
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFV-------------LHTIGK 132
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
T V YLH ++HRDLK SN
Sbjct: 133 T---VEYLHSQG---VVHRDLKPSN 151
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 25/145 (17%)
Query: 157 TDNFSINNKLGEGGFG----LVYKEIAVKRLSKISEQGLKELKNEV-ILFSKLQHRNLVK 211
+D + + +G G + V+K ++ K+ ++ ++ E+ IL QH N++
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIIT 85
Query: 212 LLGCCIQGEEKLLIYEFMPNKSL-NSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
L G+ L+ E M L + + + F SFV H I
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFV-------------LHTIGK 132
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
T V YLH ++HRDLK SN
Sbjct: 133 T---VEYLHSQG---VVHRDLKPSN 151
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 34/150 (22%)
Query: 159 NFSINNKLGEGGFGLV-------------YKEIAVKRLSKISEQGLKELKNEVILFSKLQ 205
N+ I LGEG FG V K I K L+K QG ++ E+ L+
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 71
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H +++KL +E +++ E+ N E F + R + ++ ++RF
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAGN--------ELFDYIVQRDKMSEQE------ARRF 117
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
V Y H+ +I+HRDLK N
Sbjct: 118 --FQQIISAVEYCHRH---KIVHRDLKPEN 142
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 40/158 (25%)
Query: 153 IANATDNFSINNKLGEGGFGLVYKEIAVKRLSKISEQGLKEL----------KNEVILFS 202
IA+ + F+ ++G+G FG V+K I R ++ + +L + E+ + S
Sbjct: 18 IADPEELFTKLERIGKGSFGEVFKGID-NRTQQVVAIKIIDLEEAEDEIEDIQQEITVLS 76
Query: 203 KLQHRNLVKLLGCCIQGEEKLLIYEFMPNKS----LNSFIFENF-VLTLMRSFVDQERCK 257
+ + K G ++G + +I E++ S L + F+ F + T+++ +
Sbjct: 77 QCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL------ 130
Query: 258 ILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YLH + K IHRD+KA+N
Sbjct: 131 ---------------KGLDYLHSEKK---IHRDIKAAN 150
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 34/150 (22%)
Query: 159 NFSINNKLGEGGFGLV-------------YKEIAVKRLSKISEQGLKELKNEVILFSKLQ 205
N+ I LGEG FG V K I K L+K QG ++ E+ L+
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 66
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H +++KL +E +++ E+ N E F + R + ++ ++RF
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGN--------ELFDYIVQRDKMSEQE------ARRF 112
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
V Y H+ +I+HRDLK N
Sbjct: 113 --FQQIISAVEYCHRH---KIVHRDLKPEN 137
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 34/150 (22%)
Query: 159 NFSINNKLGEGGFGLV-------------YKEIAVKRLSKISEQGLKELKNEVILFSKLQ 205
N+ I LGEG FG V K I K L+K QG ++ E+ L+
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 72
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H +++KL +E +++ E+ N E F + R + ++ ++RF
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGN--------ELFDYIVQRDKMSEQE------ARRF 118
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
V Y H+ +I+HRDLK N
Sbjct: 119 --FQQIISAVEYCHRH---KIVHRDLKPEN 143
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 35.0 bits (79), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 34/150 (22%)
Query: 159 NFSINNKLGEGGFGLV-------------YKEIAVKRLSKISEQGLKELKNEVILFSKLQ 205
N+ I LGEG FG V K I K L+K QG ++ E+ L+
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 62
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H +++KL +E +++ E+ N E F + R + ++ ++RF
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGN--------ELFDYIVQRDKMSEQE------ARRF 108
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
V Y H+ +I+HRDLK N
Sbjct: 109 --FQQIISAVEYCHRH---KIVHRDLKPEN 133
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 28/141 (19%)
Query: 165 KLGEGGFGLVYK--------EIAVKR-LSKISEQGLKELK-NEVILFSKLQHRNLVKLLG 214
K+GEG +G+V+K +A+K+ L + +K++ E+ + +L+H NLV LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 215 CCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARG 274
+ L++E+ + L+ L + V + K + W T +
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHE-------LDRYQRGVPEHLVKSITWQ--------TLQA 114
Query: 275 VMYLHQDSKLRIIHRDLKASN 295
V + H K IHRD+K N
Sbjct: 115 VNFCH---KHNCIHRDVKPEN 132
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 45/182 (24%)
Query: 137 ENRNMDLELPLFELATIANATDN----FSINNKLGEGGFGLVYK-------------EIA 179
E RN + + EL T A N + ++G G F VYK E+
Sbjct: 2 EERNQQQD-DIEELETKAVGXSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQ 60
Query: 180 VKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGC---CIQGEE-KLLIYEFMPNKSLN 235
++L+K Q KE E LQH N+V+ ++G++ +L+ E + +L
Sbjct: 61 DRKLTKSERQRFKE---EAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLK 117
Query: 236 SFI--FENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKA 293
+++ F+ + ++RS+ Q IL +G+ +LH + IIHRDLK
Sbjct: 118 TYLKRFKVXKIKVLRSWCRQ----IL-------------KGLQFLHTRTPP-IIHRDLKC 159
Query: 294 SN 295
N
Sbjct: 160 DN 161
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 34.7 bits (78), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 55/174 (31%)
Query: 158 DNFSINNKLGEGGFGLV---YKE-----IAVKRLSK------------------------ 185
+ +++ +++G+G +G+V Y E A+K LSK
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 186 -ISEQG-LKELKNEVILFSKLQHRNLVKLLGCCIQGEEKLL--IYEFMPNKSLNSFIFEN 241
I +G ++++ E+ + KL H N+VKL+ E L ++E + +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME----- 127
Query: 242 FVLTLMRSFVDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
V TL DQ R D K G+ YLH +IIHRD+K SN
Sbjct: 128 -VPTLKPLSEDQARFYFQDLIK----------GIEYLHYQ---KIIHRDIKPSN 167
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 57/142 (40%), Gaps = 30/142 (21%)
Query: 165 KLGEGGFGLVY----------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLG 214
KLG G +G V + I + R + +S +L EV + L H N++KL
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL-- 101
Query: 215 CCIQGEEKLLIYEFMPNKSLNSFIFENFVL-TLMRSFVDQERCKILDWSKRFHIICGTAR 273
Y+F +K + E + L + + + +D + II
Sbjct: 102 -----------YDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVLS 147
Query: 274 GVMYLHQDSKLRIIHRDLKASN 295
GV YLH K I+HRDLK N
Sbjct: 148 GVTYLH---KHNIVHRDLKPEN 166
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 34.3 bits (77), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 39/152 (25%)
Query: 165 KLGEGGFGLV--------YKEIAVKRLSKIS-------------EQGLKELKNEVILFSK 203
KLG G +G V + E A+K + K E+ +E+ NE+ L
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSK 263
L H N++KL + L+ EF L FE + R K D
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL----FEQII----------NRHK-FDECD 147
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+I+ G+ YLH K I+HRD+K N
Sbjct: 148 AANIMKQILSGICYLH---KHNIVHRDIKPEN 176
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 43/157 (27%)
Query: 157 TDNFSINNKLGEGGFG--------LVYKEIAVKRLSKISEQGLKE---LKNEVILFSKLQ 205
+D + KLG G +G L E A+K + K S L +EV + +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENF-------VLTLMRSFVDQERCKI 258
H N++KL YEF +K + E + + L + F + + I
Sbjct: 80 HPNIMKL-------------YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVI 126
Query: 259 LDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ ++ GT YLH K I+HRDLK N
Sbjct: 127 MK-----QVLSGTT----YLH---KHNIVHRDLKPEN 151
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 25/145 (17%)
Query: 158 DNFSINNKLGEGGFGLV-------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ ++ +LG G FG+V ++AVK + + S E E KL H LV
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLV 66
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
K G C + ++ E++ N L L +RS K L+ S+ +
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCL---------LNYLRS-----HGKGLEPSQLLEMCYD 112
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
G+ +L + IHRDL A N
Sbjct: 113 VCEGMAFLESH---QFIHRDLAARN 134
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 43/157 (27%)
Query: 157 TDNFSINNKLGEGGFG--------LVYKEIAVKRLSKISEQGLKE---LKNEVILFSKLQ 205
+D + KLG G +G L E A+K + K S L +EV + +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENF-------VLTLMRSFVDQERCKI 258
H N++KL YEF +K + E + + L + F + + I
Sbjct: 63 HPNIMKL-------------YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVI 109
Query: 259 LDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ ++ GT YLH K I+HRDLK N
Sbjct: 110 MK-----QVLSGTT----YLH---KHNIVHRDLKPEN 134
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 21/156 (13%)
Query: 158 DNFSINNKLGEGGFGLVYKE-------------IAVKRLSKISEQGLKE-LKNEVILFSK 203
+ S LG G FG V + +AVK L + +E L +E+ + S
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 204 L-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFI---FENFVLTLMRSFVDQERCKIL 259
L H N+V LLG C G L+I E+ L +F+ ++F+ + + ++ L
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
D A+G+ +L + IHRDL A N
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARN 175
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 31/150 (20%)
Query: 157 TDNFSINNKLGEGGFGLVYKEIAVKRLS-----------KISEQGLKELKNEVILFSKLQ 205
+++ + LGEG G V ++AV R++ K + + +K E+ + L
Sbjct: 5 VEDWDLVQTLGEGAAGEV--QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 206 HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
H N+VK G +G + L E+ L F+ + D +R F
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRF--------F 110
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
H + GV+YLH + I HRD+K N
Sbjct: 111 HQLMA---GVVYLH---GIGITHRDIKPEN 134
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 64/156 (41%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E M P + L FI E L L RSF Q +L
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQ----VL 124
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 125 EAVRHCH-NCG---------------VLHRDIKDEN 144
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 159 NFSINNKLGEGGFGLV-------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 211
+ + +LG G FG+V ++A+K + + S E E + L H LV+
Sbjct: 16 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 74
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFE 240
L G C + +I E+M N L +++ E
Sbjct: 75 LYGVCTKQRPIFIITEYMANGCLLNYLRE 103
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 159 NFSINNKLGEGGFGLV-------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 211
+ + +LG G FG+V ++A+K + + S E E + L H LV+
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFE 240
L G C + +I E+M N L +++ E
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLRE 97
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 31/147 (21%)
Query: 159 NFSINNKLGEGGFGLV-------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 211
+ + +LG G FG+V ++A+K + + S E E + L H LV+
Sbjct: 9 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 67
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ---ERCKILDWSKRFHII 268
L G C + +I E+M N L N++ + F Q E CK
Sbjct: 68 LYGVCTKQRPIFIITEYMANGCLL-----NYLREMRHRFQTQQLLEMCK----------- 111
Query: 269 CGTARGVMYLHQDSKLRIIHRDLKASN 295
+ YL +SK + +HRDL A N
Sbjct: 112 -DVCEAMEYL--ESK-QFLHRDLAARN 134
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 159 NFSINNKLGEGGFGLV-------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 211
+ + +LG G FG+V ++A+K + + S E E + L H LV+
Sbjct: 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFE 240
L G C + +I E+M N L +++ E
Sbjct: 64 LYGVCTKQRPIFIITEYMANGCLLNYLRE 92
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 31/147 (21%)
Query: 159 NFSINNKLGEGGFGLV-------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 211
+ + +LG G FG+V ++A+K + + S E E + L H LV+
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQ---ERCKILDWSKRFHII 268
L G C + +I E+M N L N++ + F Q E CK +
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLL-----NYLREMRHRFQTQQLLEMCK---------DV 129
Query: 269 CGTARGVMYLHQDSKLRIIHRDLKASN 295
C + YL +SK + +HRDL A N
Sbjct: 130 C---EAMEYL--ESK-QFLHRDLAARN 150
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 159 NFSINNKLGEGGFGLV-------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 211
+ + +LG G FG+V ++A+K + + S E E + L H LV+
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFE 240
L G C + +I E+M N L +++ E
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYLRE 112
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 21/156 (13%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLKE-LKNEVILFSK 203
+ S LG G FG V + +AVK L + +E L +E+ + S
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 204 L-QHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFI---FENFVLTLMRSFVDQERCKIL 259
L H N+V LLG C G L+I E+ L +F+ ++F+ + + ++ L
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
D A+G+ +L + IHRDL A N
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARN 198
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 29/147 (19%)
Query: 157 TDNFSINNKLGEGGFGL----VYK----EIAVKRLSKISEQGLKELKNEVILFSKLQHRN 208
TD + + +G G + + ++K E AVK + K +E++ IL QH N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIE---ILLRYGQHPN 77
Query: 209 LVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHII 268
++ L G+ ++ E L I + F ++E +L F I
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGELLDKILRQ------KFFSEREASAVL-----FTI- 125
Query: 269 CGTARGVMYLHQDSKLRIIHRDLKASN 295
+ V YLH ++HRDLK SN
Sbjct: 126 ---TKTVEYLHAQG---VVHRDLKPSN 146
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 159 NFSINNKLGEGGFGLV-------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVK 211
+ + +LG G FG+V ++A+K + + S E E + L H LV+
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 212 LLGCCIQGEEKLLIYEFMPNKSLNSFIFE 240
L G C + +I E+M N L +++ E
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLRE 97
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 15/86 (17%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLKE-LKNEVILFSK 203
+ S LG G FG V + +AVK L + +E L +E+ + S
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 204 L-QHRNLVKLLGCCIQGEEKLLIYEF 228
L H N+V LLG C G L+I E+
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEY 124
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 15/86 (17%)
Query: 158 DNFSINNKLGEGGFGLVYKE-------------IAVKRLSKISEQGLKE-LKNEVILFSK 203
+ S LG G FG V + +AVK L + +E L +E+ + S
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 204 L-QHRNLVKLLGCCIQGEEKLLIYEF 228
L H N+V LLG C G L+I E+
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEY 126
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 15/86 (17%)
Query: 158 DNFSINNKLGEGGFGLVYK-------------EIAVKRLSKISEQGLKE-LKNEVILFSK 203
+ S LG G FG V + +AVK L + +E L +E+ + S
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 204 L-QHRNLVKLLGCCIQGEEKLLIYEF 228
L H N+V LLG C G L+I E+
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEY 131
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 61/151 (40%), Gaps = 48/151 (31%)
Query: 165 KLGEGGFGLVYKE--------IAVKR--LSKISEQGLKELKNEVILFSKLQHRNLVKLLG 214
K+GEG +G V+K +A+KR L E E+ L +L+H+N+V+L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 215 CCIQGEEKLLIYEFMP----------NKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
++ L++EF N L+ I ++F+ L+
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLL----------------- 111
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H + ++HRDLK N
Sbjct: 112 --------KGLGFCHSRN---VLHRDLKPQN 131
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 38/162 (23%)
Query: 158 DNFSINNKLGEGGFGLV-------------YKEIAVKRLSKISEQG-----LKELKNEVI 199
D ++ LG G FG V + +AVK L + + + ELK I
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK---I 83
Query: 200 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMPNKSLNSFIFE---NFVL--TLMRSFVDQ 253
L H N+V LLG C + G ++I EF +L++++ FV L + F+
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 254 ERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
E ++ +S F + A+G+ +L + + IHRDL A N
Sbjct: 144 EH--LIXYS--FQV----AKGMEFL---ASRKXIHRDLAARN 174
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 61/151 (40%), Gaps = 48/151 (31%)
Query: 165 KLGEGGFGLVYKE--------IAVKR--LSKISEQGLKELKNEVILFSKLQHRNLVKLLG 214
K+GEG +G V+K +A+KR L E E+ L +L+H+N+V+L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 215 CCIQGEEKLLIYEFMP----------NKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
++ L++EF N L+ I ++F+ L+
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLL----------------- 111
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ + H + ++HRDLK N
Sbjct: 112 --------KGLGFCHSRN---VLHRDLKPQN 131
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 67/164 (40%), Gaps = 40/164 (24%)
Query: 158 DNFSINNKLGEGGFGLV-------------YKEIAVKRLSKISEQG-----LKELKNEVI 199
D + LG G FG V + +AVK L + + + ELK I
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK---I 85
Query: 200 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI 258
L H N+V LLG C + G ++I EF +L++++ FV K
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK-----RNEFVPY---KP 137
Query: 259 LDWSKRF----HIIC---GTARGVMYLHQDSKLRIIHRDLKASN 295
D K F H+I A+G+ +L + + IHRDL A N
Sbjct: 138 EDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARN 178
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 31/150 (20%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 206
++F LGEG F V +E A+K L K I E + + E + S+L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 207 RNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
VKL Q +EKL + N L +I + + SF E C RF
Sbjct: 95 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------RF 139
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH IIHRDLK N
Sbjct: 140 YT-AEIVSALEYLHGKG---IIHRDLKPEN 165
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 31/150 (20%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 206
++F LGEG F V +E A+K L K I E + + E + S+L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 207 RNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
VKL Q +EKL + N L +I + + SF E C RF
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------RF 134
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH IIHRDLK N
Sbjct: 135 YT-AEIVSALEYLHGKG---IIHRDLKPEN 160
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 30/152 (19%)
Query: 154 ANATDNFSINNKLGEGGFGLVYKEIAVKRLSKISEQGLKEL----------KNEVILFSK 203
A+ + F+ K+G+G FG V+K I R K+ + +L + E+ + S+
Sbjct: 18 ADPEELFTKLEKIGKGSFGEVFKGID-NRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 76
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSK 263
+ K G ++ + +I E++ S +D LD ++
Sbjct: 77 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA----------------LDLLEPGPLDETQ 120
Query: 264 RFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
I+ +G+ YLH + K IHRD+KA+N
Sbjct: 121 IATILREILKGLDYLHSEKK---IHRDIKAAN 149
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 31/150 (20%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 206
++F LGEG F V +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 207 RNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
VKL Q +EKL + N L +I + + SF E C RF
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------RF 136
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH IIHRDLK N
Sbjct: 137 YT-AEIVSALEYLHGKG---IIHRDLKPEN 162
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 31/150 (20%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 206
++F LGEG F V +E A+K L K I E + + E + S+L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 207 RNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
VKL Q +EKL + N L +I + + SF E C RF
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------RF 137
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH IIHRDLK N
Sbjct: 138 YT-AEIVSALEYLHGKG---IIHRDLKPEN 163
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 31/150 (20%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 206
++F LGEG F V +E A+K L K I E + + E + S+L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 207 RNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
VKL Q +EKL + N L +I + + SF E C RF
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------RF 134
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH IIHRDLK N
Sbjct: 135 YT-AEIVSALEYLHGKG---IIHRDLKPEN 160
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 31/150 (20%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 206
++F LGEG F V +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 207 RNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
VKL Q +EKL + N L +I + + SF E C RF
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------RF 136
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH IIHRDLK N
Sbjct: 137 YT-AEIVSALEYLHGKG---IIHRDLKPEN 162
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 31/150 (20%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 206
++F LGEG F V +E A+K L K I E + + E + S+L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 207 RNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
VKL Q +EKL + N L +I + + SF E C RF
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------RF 137
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH IIHRDLK N
Sbjct: 138 YT-AEIVSALEYLHGKG---IIHRDLKPEN 163
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 31/150 (20%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 206
++F LGEG F V +E A+K L K I E + + E + S+L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 207 RNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
VKL Q +EKL + N L +I + + SF E C RF
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------RF 134
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH IIHRDLK N
Sbjct: 135 YT-AEIVSALEYLHGKG---IIHRDLKPEN 160
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 31/150 (20%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 206
++F LGEG F V +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 207 RNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
VKL Q +EKL + N L +I + + SF E C RF
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------RF 136
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH IIHRDLK N
Sbjct: 137 YT-AEIVSALEYLHGKG---IIHRDLKPEN 162
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 31/150 (20%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 206
++F LGEG F V +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 207 RNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
VKL Q +EKL + N L +I + + SF E C RF
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------RF 136
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH IIHRDLK N
Sbjct: 137 YT-AEIVSALEYLHGKG---IIHRDLKPEN 162
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 31/150 (20%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 206
++F LGEG F V +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 207 RNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
VKL Q +EKL + N L +I + + SF E C RF
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------RF 136
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH IIHRDLK N
Sbjct: 137 YT-AEIVSALEYLHGKG---IIHRDLKPEN 162
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 60/151 (39%), Gaps = 31/151 (20%)
Query: 157 TDNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQ 205
++F LGEG F V +E A+K L K I E + + E + S+L
Sbjct: 9 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 68
Query: 206 HRNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
H VKL Q +EKL + N L +I + + SF E C R
Sbjct: 69 HPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------R 113
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
F+ + YLH IIHRDLK N
Sbjct: 114 FYT-AEIVSALEYLHGKG---IIHRDLKPEN 140
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 158 DNFSINNKLGEGGFGLVY-------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
+ + I LG G FG+V+ K+ + + K+ +K E+ + + +HRN++
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 211 KLLGCCIQGEEKLLIYEFM 229
L EE ++I+EF+
Sbjct: 65 HLHESFESMEELVMIFEFI 83
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 60/151 (39%), Gaps = 31/151 (20%)
Query: 157 TDNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQ 205
++F LGEG F V +E A+K L K I E + + E + S+L
Sbjct: 8 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 67
Query: 206 HRNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
H VKL Q +EKL + N L +I + + SF E C R
Sbjct: 68 HPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------R 112
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
F+ + YLH IIHRDLK N
Sbjct: 113 FYT-AEIVSALEYLHGKG---IIHRDLKPEN 139
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 31/150 (20%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 206
++F LGEG F V +E A+K L K I E + + E + S+L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 207 RNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
VKL Q +EKL + N L +I + + SF E C RF
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------RF 133
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH IIHRDLK N
Sbjct: 134 YT-AEIVSALEYLHGKG---IIHRDLKPEN 159
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 60/151 (39%), Gaps = 31/151 (20%)
Query: 157 TDNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQ 205
++F LGEG F V +E A+K L K I E + + E + S+L
Sbjct: 6 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 65
Query: 206 HRNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
H VKL Q +EKL + N L +I + + SF E C R
Sbjct: 66 HPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------R 110
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
F+ + YLH IIHRDLK N
Sbjct: 111 FYT-AEIVSALEYLHGKG---IIHRDLKPEN 137
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 31/150 (20%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 206
++F LGEG F V +E A+K L K I E + + E + S+L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 207 RNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
VKL Q +EKL + N L +I + + SF E C RF
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------RF 133
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH IIHRDLK N
Sbjct: 134 YT-AEIVSALEYLHGKG---IIHRDLKPEN 159
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 60/151 (39%), Gaps = 31/151 (20%)
Query: 157 TDNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQ 205
++F LGEG F V +E A+K L K I E + + E + S+L
Sbjct: 7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 66
Query: 206 HRNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKR 264
H VKL Q +EKL + N L +I + + SF E C R
Sbjct: 67 HPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------R 111
Query: 265 FHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
F+ + YLH IIHRDLK N
Sbjct: 112 FYT-AEIVSALEYLHGKG---IIHRDLKPEN 138
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 31/150 (20%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 206
++F LGEG F V +E A+K L K I E + + E + S+L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 207 RNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
VKL Q +EKL + N L +I + + SF E C RF
Sbjct: 74 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------RF 118
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH IIHRDLK N
Sbjct: 119 YT-AEIVSALEYLHGKG---IIHRDLKPEN 144
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 44/157 (28%)
Query: 158 DNFSINNKLGEGGFGLVYKEIAVKRLSKISEQG----LKELKNEVIL------------- 200
DNF LG+G FG V L+++ E G +K LK +VIL
Sbjct: 23 DNFEFIRVLGKGSFGKVM-------LARVKETGDLYAVKVLKKDVILQDDDVECTMTEKR 75
Query: 201 -FSKLQHRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKI 258
S ++ + L CC Q ++L + EF+ L F + R F D+ R
Sbjct: 76 ILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL------MFHIQKSRRF-DEARA-- 126
Query: 259 LDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
RF+ +M+LH II+RDLK N
Sbjct: 127 -----RFY-AAEIISALMFLHDKG---IIYRDLKLDN 154
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E P + L FI E L L RSF Q +L
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ----VL 140
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 141 EAVRHCH-NCG---------------VLHRDIKDEN 160
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E P + L FI E L L RSF Q +L
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ----VL 139
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 140 EAVRHCH-NCG---------------VLHRDIKDEN 159
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 160 FSINNKLGEGGFGLVYKEIAVKRLSKISEQGLKEL----------KNEVILFSKLQHRNL 209
F+ K+G+G FG V+K I R K+ + +L + E+ + S+ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGID-NRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
K G ++ + +I E++ S +D LD ++ I+
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSA----------------LDLLEPGPLDETQIATILR 131
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YLH + K IHRD+KA+N
Sbjct: 132 EILKGLDYLHSEKK---IHRDIKAAN 154
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 32/145 (22%)
Query: 164 NKLGEGGFG-------------LVYKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV 210
K+GEG FG V KEI + R+S + E + EV + + ++H N+V
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKERE---ESRREVAVLANMKHPNIV 86
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICG 270
+ + ++ ++ L I + + QE +ILDW F IC
Sbjct: 87 QYRESFEENGSLYIVMDYCEGGDLFKRI------NAQKGVLFQED-QILDW---FVQIC- 135
Query: 271 TARGVMYLHQDSKLRIIHRDLKASN 295
+ L +I+HRD+K+ N
Sbjct: 136 -----LALKHVHDRKILHRDIKSQN 155
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E P + L FI E L L RSF Q +L
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ----VL 140
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 141 EAVRHCH-NCG---------------VLHRDIKDEN 160
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 48/155 (30%)
Query: 165 KLGEGGFGLVYK--------EIAVKRLSKISEQ------GLKELKNEVILFSKLQHRNLV 210
K+G+G FG V+K ++A+K++ +E+ L+E+K + L+H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 80
Query: 211 KLLGCCIQGEEK--------LLIYEFMPN--KSLNSFIFENFVLTLMRSFVDQERCKILD 260
L+ C L+++F + L S + F L+ ++
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK------------ 128
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
++ G+ Y+H++ +I+HRD+KA+N
Sbjct: 129 -----RVMQMLLNGLYYIHRN---KILHRDMKAAN 155
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E P + L FI E L L RSF Q +L
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ----VL 139
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 140 EAVRHCH-NCG---------------VLHRDIKDEN 159
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 31/150 (20%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 206
++F LGEG F V +E A+K L K I E + + E + S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 207 RNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
VKL Q +EKL + N L +I + + SF E C RF
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRK------IGSF--DETCT------RF 136
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH IIHRDLK N
Sbjct: 137 YT-AEIVSALEYLHGKG---IIHRDLKPEN 162
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E P + L FI E L L RSF Q +L
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ----VL 140
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 141 EAVRHCH-NCG---------------VLHRDIKDEN 160
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 48/155 (30%)
Query: 165 KLGEGGFGLVYK--------EIAVKRLSKISEQ------GLKELKNEVILFSKLQHRNLV 210
K+G+G FG V+K ++A+K++ +E+ L+E+K + L+H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 80
Query: 211 KLLGCCIQGEEK--------LLIYEFMPN--KSLNSFIFENFVLTLMRSFVDQERCKILD 260
L+ C L+++F + L S + F L+ ++
Sbjct: 81 NLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK------------ 128
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
++ G+ Y+H++ +I+HRD+KA+N
Sbjct: 129 -----RVMQMLLNGLYYIHRN---KILHRDMKAAN 155
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 69/150 (46%), Gaps = 38/150 (25%)
Query: 160 FSINNKLGEGGFGLVYKEI--------AVKRLS-KISEQGLKELKNEVILFSKLQHRNLV 210
F+ +++G+G FG VYK I A+K + + +E +++++ E+ + S+ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 211 KLLGCCIQGEEKLLIYEFMPNKSLNSFIF-----ENFVLTLMRSFVDQERCKILDWSKRF 265
+ G ++ + +I E++ S + E ++ T++R +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREIL-------------- 126
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YLH + K IHRD+KA+N
Sbjct: 127 -------KGLDYLHSERK---IHRDIKAAN 146
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E P + L FI E L L RSF Q +L
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ----VL 159
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 160 EAVRHCH-NCG---------------VLHRDIKDEN 179
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 48/155 (30%)
Query: 165 KLGEGGFGLVYK--------EIAVKRLSKISEQ------GLKELKNEVILFSKLQHRNLV 210
K+G+G FG V+K ++A+K++ +E+ L+E+K + L+H N+V
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 79
Query: 211 KLLGCCIQGEEK--------LLIYEFMPN--KSLNSFIFENFVLTLMRSFVDQERCKILD 260
L+ C L+++F + L S + F L+ ++
Sbjct: 80 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK------------ 127
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
++ G+ Y+H++ +I+HRD+KA+N
Sbjct: 128 -----RVMQMLLNGLYYIHRN---KILHRDMKAAN 154
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 43/158 (27%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSK--ISEQGLKELKN------EVILFS 202
+ + LG GGFG VY +A+K + K IS+ G EL N EV+L
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPNGTRVPMEVVLLK 95
Query: 203 KLQH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCK 257
K+ +++LL + + +LI E P + L FI E L L RSF Q
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ---- 151
Query: 258 ILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+L+ + H CG ++HRD+K N
Sbjct: 152 VLEAVRHCH-NCG---------------VLHRDIKDEN 173
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 31.2 bits (69), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E P + L FI E L L RSF Q +L
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ----VL 125
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 126 EAVRHCH-NCG---------------VLHRDIKDEN 145
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 31.2 bits (69), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 30/161 (18%)
Query: 146 PLFELATIANATDNFSINNKLGEGGFGLV--------YKEIAVKRLSK---ISEQGLKEL 194
P+F+ N D+F I +G+G FG V K A+K ++K + ++ +
Sbjct: 4 PVFDENEDVNF-DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNV 62
Query: 195 KNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQE 254
E+ + L+H LV L E+ ++ + + L + +N +E
Sbjct: 63 FKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFK-------EE 115
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
K+ IC + YL RIIHRD+K N
Sbjct: 116 TVKLF--------ICELVMALDYLQNQ---RIIHRDMKPDN 145
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.2 bits (69), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 48/155 (30%)
Query: 165 KLGEGGFGLVYK--------EIAVKRLSKISEQ------GLKELKNEVILFSKLQHRNLV 210
K+G+G FG V+K ++A+K++ +E+ L+E+K + L+H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 80
Query: 211 KLLGCCIQGEEK--------LLIYEFMPN--KSLNSFIFENFVLTLMRSFVDQERCKILD 260
L+ C L+++F + L S + F L+ ++
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK------------ 128
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
++ G+ Y+H++ +I+HRD+KA+N
Sbjct: 129 -----RVMQMLLNGLYYIHRN---KILHRDMKAAN 155
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 31.2 bits (69), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 43/158 (27%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSK--ISEQGLKELKN------EVILFS 202
+ + LG GGFG VY +A+K + K IS+ G EL N EV+L
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPNGTRVPMEVVLLK 94
Query: 203 KLQH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCK 257
K+ +++LL + + +LI E P + L FI E L L RSF Q
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ---- 150
Query: 258 ILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+L+ + H CG ++HRD+K N
Sbjct: 151 VLEAVRHCH-NCG---------------VLHRDIKDEN 172
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 31.2 bits (69), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 43/158 (27%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSK--ISEQGLKELKN------EVILFS 202
+ + LG GGFG VY +A+K + K IS+ G EL N EV+L
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPNGTRVPMEVVLLK 94
Query: 203 KLQH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCK 257
K+ +++LL + + +LI E P + L FI E L L RSF Q
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ---- 150
Query: 258 ILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+L+ + H CG ++HRD+K N
Sbjct: 151 VLEAVRHCH-NCG---------------VLHRDIKDEN 172
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 31.2 bits (69), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 43/158 (27%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSK--ISEQGLKELKN------EVILFS 202
+ + LG GGFG VY +A+K + K IS+ G EL N EV+L
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPNGTRVPMEVVLLK 95
Query: 203 KLQH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCK 257
K+ +++LL + + +LI E P + L FI E L L RSF Q
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ---- 151
Query: 258 ILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+L+ + H CG ++HRD+K N
Sbjct: 152 VLEAVRHCH-NCG---------------VLHRDIKDEN 173
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 31.2 bits (69), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 235 NSFIFENFVLTLMRSFVD-QERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKA 293
+ F++ + RS ++ +R K + + + + T +GV YLH + R+IHRDLK
Sbjct: 114 DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKL 170
Query: 294 SN 295
N
Sbjct: 171 GN 172
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 31.2 bits (69), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 235 NSFIFENFVLTLMRSFVD-QERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKA 293
+ F++ + RS ++ +R K + + + + T +GV YLH + R+IHRDLK
Sbjct: 114 DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKL 170
Query: 294 SN 295
N
Sbjct: 171 GN 172
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 31.2 bits (69), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 43/158 (27%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSK--ISEQGLKELKN------EVILFS 202
+ + LG GGFG VY +A+K + K IS+ G EL N EV+L
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPNGTRVPMEVVLLK 94
Query: 203 KLQH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCK 257
K+ +++LL + + +LI E P + L FI E L L RSF Q
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ---- 150
Query: 258 ILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+L+ + H CG ++HRD+K N
Sbjct: 151 VLEAVRHCH-NCG---------------VLHRDIKDEN 172
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 31.2 bits (69), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 43/158 (27%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSK--ISEQGLKELKN------EVILFS 202
+ + LG GGFG VY +A+K + K IS+ G EL N EV+L
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPNGTRVPMEVVLLK 95
Query: 203 KLQH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCK 257
K+ +++LL + + +LI E P + L FI E L L RSF Q
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ---- 151
Query: 258 ILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+L+ + H CG ++HRD+K N
Sbjct: 152 VLEAVRHCH-NCG---------------VLHRDIKDEN 173
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 31.2 bits (69), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E P + L FI E L L RSF Q +L
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ----VL 125
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 126 EAVRHCH-NCG---------------VLHRDIKDEN 145
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 31.2 bits (69), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 235 NSFIFENFVLTLMRSFVD-QERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKA 293
+ F++ + RS ++ +R K + + + + T +GV YLH + R+IHRDLK
Sbjct: 114 DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKL 170
Query: 294 SN 295
N
Sbjct: 171 GN 172
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 31.2 bits (69), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 43/158 (27%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSK--ISEQGLKELKN------EVILFS 202
+ + LG GGFG VY +A+K + K IS+ G EL N EV+L
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPNGTRVPMEVVLLK 114
Query: 203 KLQH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCK 257
K+ +++LL + + +LI E P + L FI E L L RSF Q
Sbjct: 115 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ---- 170
Query: 258 ILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+L+ + H CG ++HRD+K N
Sbjct: 171 VLEAVRHCH-NCG---------------VLHRDIKDEN 192
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 31.2 bits (69), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E P + L FI E L L RSF Q +L
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ----VL 152
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 153 EAVRHCH-NCG---------------VLHRDIKDEN 172
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 31.2 bits (69), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 55/147 (37%), Gaps = 23/147 (15%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSKISEQ-GLKELKNEVILFSKLQHRN 208
D F KLG G FG V+ E +K ++K Q +++++ E+ + L H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 209 LVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHII 268
++K+ ++ E L L R Q R K L ++
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGEL-----------LERIVSAQARGKALSEGYVAELM 130
Query: 269 CGTARGVMYLHQDSKLRIIHRDLKASN 295
+ Y H ++H+DLK N
Sbjct: 131 KQMMNALAYFHSQ---HVVHKDLKPEN 154
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 31.2 bits (69), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E P + L FI E L L RSF Q +L
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ----VL 153
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 154 EAVRHCH-NCG---------------VLHRDIKDEN 173
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E P + L FI E L L RSF Q +L
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ----VL 125
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 126 EAVRHCH-NCG---------------VLHRDIKDEN 145
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 160 FSINNKLGEGGFGLVYKEIAVKRLSKISEQGLKEL----------KNEVILFSKLQHRNL 209
F+ K+G+G FG V+K I R K+ + +L + E+ + S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGID-NRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
K G ++ + +I E++ S +D LD ++ I+
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSA----------------LDLLEPGPLDETQIATILR 111
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YLH + K IHRD+KA+N
Sbjct: 112 EILKGLDYLHSEKK---IHRDIKAAN 134
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E P + L FI E L L RSF Q +L
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ----VL 124
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 125 EAVRHCH-NCG---------------VLHRDIKDEN 144
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 235 NSFIFENFVLTLMRSFVD-QERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKA 293
+ F++ + RS ++ +R K + + + + T +GV YLH + R+IHRDLK
Sbjct: 98 DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKL 154
Query: 294 SN 295
N
Sbjct: 155 GN 156
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E P + L FI E L L RSF Q +L
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ----VL 167
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 168 EAVRHCH-NCG---------------VLHRDIKDEN 187
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 235 NSFIFENFVLTLMRSFVD-QERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKA 293
N F+F L RS ++ +R K L + + + G YLH++ R+IHRDLK
Sbjct: 111 NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKL 167
Query: 294 SN 295
N
Sbjct: 168 GN 169
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 235 NSFIFENFVLTLMRSFVD-QERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKA 293
N F+F L RS ++ +R K L + + + G YLH++ R+IHRDLK
Sbjct: 93 NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKL 149
Query: 294 SN 295
N
Sbjct: 150 GN 151
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 235 NSFIFENFVLTLMRSFVD-QERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKA 293
N F+F L RS ++ +R K L + + + G YLH++ R+IHRDLK
Sbjct: 113 NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKL 169
Query: 294 SN 295
N
Sbjct: 170 GN 171
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 235 NSFIFENFVLTLMRSFVD-QERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKA 293
N F+F L RS ++ +R K L + + + G YLH++ R+IHRDLK
Sbjct: 89 NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKL 145
Query: 294 SN 295
N
Sbjct: 146 GN 147
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 43/158 (27%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSK--ISEQGLKELKN------EVILFS 202
+ + LG GGFG VY +A+K + K IS+ G EL N EV+L
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPNGTRVPMEVVLLK 109
Query: 203 KLQH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCK 257
K+ +++LL + + +LI E P + L FI E L L RSF Q
Sbjct: 110 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ---- 165
Query: 258 ILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+L+ + H CG ++HRD+K N
Sbjct: 166 VLEAVRHCH-NCG---------------VLHRDIKDEN 187
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E P + L FI E L L RSF Q +L
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ----VL 120
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 121 EAVRHCH-NCG---------------VLHRDIKDEN 140
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 235 NSFIFENFVLTLMRSFVD-QERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKA 293
N F+F L RS ++ +R K L + + + G YLH++ R+IHRDLK
Sbjct: 89 NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKL 145
Query: 294 SN 295
N
Sbjct: 146 GN 147
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E P + L FI E L L RSF Q +L
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ----VL 123
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 124 EAVRHCH-NCG---------------VLHRDIKDEN 143
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E P + L FI E L L RSF Q +L
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ----VL 147
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 148 EAVRHCH-NCG---------------VLHRDIKDEN 167
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 160 FSINNKLGEGGFGLVYKEIAVKRLSKISEQGLKEL----------KNEVILFSKLQHRNL 209
F+ K+G+G FG V+K I R K+ + +L + E+ + S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGID-NRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 210 VKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIIC 269
K G ++ + +I E++ S +D LD ++ I+
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSA----------------LDLLEPGPLDETQIATILR 111
Query: 270 GTARGVMYLHQDSKLRIIHRDLKASN 295
+G+ YLH + K IHRD+KA+N
Sbjct: 112 EILKGLDYLHSEKK---IHRDIKAAN 134
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSFVDQERCKIL 259
+++LL + + +LI E P + L FI E L L RSF Q +L
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ----VL 120
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + H CG ++HRD+K N
Sbjct: 121 EAVRHCH-NCG---------------VLHRDIKDEN 140
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 30.8 bits (68), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 26/144 (18%)
Query: 164 NKLGEGGFGLV--------YKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGC 215
KLGEGGF V A+KR+ +Q +E + E + H N+++L+
Sbjct: 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 216 CIQ----GEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGT 271
C++ E L+ F +L + I E +++ L + ++ G
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEI-ERL----------KDKGNFLTEDQILWLLLGI 143
Query: 272 ARGVMYLHQDSKLRIIHRDLKASN 295
RG+ +H HRDLK +N
Sbjct: 144 CRGLEAIHAKG---YAHRDLKPTN 164
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 59/150 (39%), Gaps = 31/150 (20%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSK---ISEQGLKELKNEVILFSKLQH 206
++F LGEG F +E A+K L K I E + + E + S+L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 207 RNLVKLLGCCIQGEEKLLI-YEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRF 265
VKL Q +EKL + N L +I + + SF E C RF
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRK------IGSF--DETCT------RF 134
Query: 266 HIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ + YLH IIHRDLK N
Sbjct: 135 YT-AEIVSALEYLHGKG---IIHRDLKPEN 160
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 30.8 bits (68), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 235 NSFIFENFVLTLMRSFVD-QERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKA 293
N F+F L RS ++ +R K L + + + G YLH++ R+IHRDLK
Sbjct: 87 NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKL 143
Query: 294 SN 295
N
Sbjct: 144 GN 145
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 30.8 bits (68), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 41/178 (23%)
Query: 137 ENRNMDLELPLFE-----LATIANATDNFSINNKLGEGGFGLVY--------KEIAVKRL 183
+N+N+D L +E + + +++ + +G G FG V K A+K L
Sbjct: 49 KNKNIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLL 108
Query: 184 SKI-----SEQGLKELKNEVILFSKLQHRNLVKLLGCCIQGEEKL-LIYEFMPNKSLNSF 237
SK S+ + +++ F+ + V L C Q ++ L ++ E+MP L
Sbjct: 109 SKFEMIKRSDSAFFWEERDIMAFA---NSPWVVQLFCAFQDDKYLYMVMEYMPGGDL--- 162
Query: 238 IFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ LM ++ E+ W+K + TA V+ L + +IHRD+K N
Sbjct: 163 ------VNLMSNYDVPEK-----WAKFY-----TAEVVLALDAIHSMGLIHRDVKPDN 204
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 156 ATDNFSINNKLGEGGFGLVY-------------KEIAVKRLSK-ISEQGLKELKNEVILF 201
A + + LG G FG V + +AVK L + + K L E+ +
Sbjct: 25 ARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKIL 84
Query: 202 SKL-QHRNLVKLLGCCI-QGEEKLLIYEFMPNKSLNSFI 238
+ + H N+V LLG C QG ++I E+ +L++++
Sbjct: 85 THIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 193 ELKNEVILFSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVD 252
+ KNE+ + + +++ + G +E +IYE+M N S+ F+ + L +++
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI--LKFDEYFFVLDKNYTC 146
Query: 253 QERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+++ II Y+H + I HRD+K SN
Sbjct: 147 FIPIQVIKC-----IIKSVLNSFSYIHNEK--NICHRDVKPSN 182
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/139 (20%), Positives = 61/139 (43%), Gaps = 24/139 (17%)
Query: 166 LGEGGFGLV--------YKEIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 216
+GEG +G+V +A+K++S Q + E+ + + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 217 IQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVM 276
+I + + +I ++ + T + + +C+ L + + RG+
Sbjct: 91 -----NDIIRAPTIEQMKDVYIVQDLMETDLYKLL---KCQHLSNDHICYFLYQILRGLK 142
Query: 277 YLHQDSKLRIIHRDLKASN 295
Y+H + ++HRDLK SN
Sbjct: 143 YIHSAN---VLHRDLKPSN 158
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 22/100 (22%)
Query: 158 DNFSINNKLGEGGFGLVY-------------KEIAVKRLSKISEQG-----LKELKNEVI 199
D + LG G FG V + +AVK L + + + ELK I
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 85
Query: 200 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMPNKSLNSFI 238
L H N+V LLG C + G ++I EF +L++++
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 22/100 (22%)
Query: 158 DNFSINNKLGEGGFGLVY-------------KEIAVKRLSKISEQG-----LKELKNEVI 199
D + LG G FG V + +AVK L + + + ELK I
Sbjct: 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 78
Query: 200 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMPNKSLNSFI 238
L H N+V LLG C + G ++I EF +L++++
Sbjct: 79 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 22/100 (22%)
Query: 158 DNFSINNKLGEGGFGLVY-------------KEIAVKRLSKISEQG-----LKELKNEVI 199
D + LG G FG V + +AVK L + + + ELK I
Sbjct: 20 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 76
Query: 200 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMPNKSLNSFI 238
L H N+V LLG C + G ++I EF +L++++
Sbjct: 77 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 19/111 (17%)
Query: 159 NFSINNKLGEGGFGLVYK--------EIAVKRLSKISEQGLKELKN------EVILFSKL 204
+ + LG GGFG VY +A+K + K EL N EV+L K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 205 QH--RNLVKLLGCCIQGEEKLLIYEFM-PNKSLNSFIFENFVLT--LMRSF 250
+++LL + + +LI E P + L FI E L L RSF
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 115
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 22/100 (22%)
Query: 158 DNFSINNKLGEGGFGLVY-------------KEIAVKRLSKISEQG-----LKELKNEVI 199
D + LG G FG V + +AVK L + + + ELK I
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 83
Query: 200 LFSKLQHRNLVKLLGCCIQ-GEEKLLIYEFMPNKSLNSFI 238
L H N+V LLG C + G ++I EF +L++++
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 45/161 (27%)
Query: 152 TIANATDNFSINNKLGEGGFGLVY---KEIAVKRLSKISEQGLKELKNEVILFSKLQ--- 205
+ ++ F I +K+GEG F VY ++ V KI+ + L + + + ++LQ
Sbjct: 15 AVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLT 74
Query: 206 ----HRNLVKLLGCCIQGEEKLLIYEFMPNKS----LNSFIFEN---FVLTLMRSFVDQE 254
N++ + C + + ++ ++ ++S LNS F+ ++L L ++
Sbjct: 75 VAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKAL---- 130
Query: 255 RCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
KR H + I+HRD+K SN
Sbjct: 131 --------KRIH----------------QFGIVHRDVKPSN 147
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 166 LGEGGFGLVY------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQG 219
+G+G FG V ++AVK + ++ + E + ++L+H NLV+LLG ++
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 220 EEKL-LIYEFMPNKSLNSFI 238
+ L ++ E+M SL ++
Sbjct: 259 KGGLYIVTEYMAKGSLVDYL 278
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 14/162 (8%)
Query: 145 LPLFELATIANATDN-FSINNKLGEGGFGLVYKEIAVKRLSKISEQGLK-ELKNEVILFS 202
+P E + + N + + K+G GGFGL+Y + K + +K E + LFS
Sbjct: 23 MPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFS 82
Query: 203 KLQHRNLVKLLGCCIQG-EEKLLIYEFMP---NKSLNSFIFENFVLTLM-RSFVDQERCK 257
+L+ V C + E K L Y +P L F ++ +M R +D ++
Sbjct: 83 ELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKIS 142
Query: 258 ILDWSKRFHIICGTARGVM----YLHQDSKLRIIHRDLKASN 295
+ + + + ++ Y+H++ +H D+KA+N
Sbjct: 143 GQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAAN 181
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 166 LGEGGFGLVY------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQG 219
+G+G FG V ++AVK + ++ + E + ++L+H NLV+LLG ++
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 220 EEKL-LIYEFMPNKSLNSFI 238
+ L ++ E+M SL ++
Sbjct: 87 KGGLYIVTEYMAKGSLVDYL 106
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 251 VDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
V E K+ ++ A GV +LH L+IIHRDLK N
Sbjct: 104 VSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQN 145
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLS-----KISEQGLKELKN----EVIL 200
+N+ LG G +V KE AVK + S + ++EL+ EV +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 201 FSKLQ-HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKIL 259
K+ H N+++L L+++ M L ++ E L+ ++E KI+
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS------EKETRKIM 117
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+IC LH KL I+HRDLK N
Sbjct: 118 --RALLEVICA-------LH---KLNIVHRDLKPEN 141
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 251 VDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
V E K+ ++ A GV +LH L+IIHRDLK N
Sbjct: 104 VSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQN 145
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 28/141 (19%)
Query: 166 LGEGGFGLVYK--------EIAVKRLSKISEQGL-KELKNEVILFSKLQHRNLVKLLGCC 216
+GEG +G+V +A+K++S Q + E+ + + +H N++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 217 IQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRS--FVDQERCKILDWSKRFHIICGTARG 274
+ E M + + + E + L++S + C L + I+ RG
Sbjct: 111 -----RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFL-----YQIL----RG 156
Query: 275 VMYLHQDSKLRIIHRDLKASN 295
+ Y+H + ++HRDLK SN
Sbjct: 157 LKYIHSAN---VLHRDLKPSN 174
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 166 LGEGGFGLVY------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQG 219
+G+G FG V ++AVK + ++ + E + ++L+H NLV+LLG ++
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 220 EEKL-LIYEFMPNKSLNSFI 238
+ L ++ E+M SL ++
Sbjct: 78 KGGLYIVTEYMAKGSLVDYL 97
>pdb|1GO5|A Chain A, Structure Of The C-Terminal Fg-Binding Domain Of Human
Tap
Length = 69
Score = 29.6 bits (65), Expect = 2.4, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 24 QCLKGFKQKSRGYVDWSQGCVRDKSLNYSR 53
+ L+ F +S ++WSQ C++D + +Y+R
Sbjct: 19 EMLQAFSTQSGMNLEWSQKCLQDNNWDYTR 48
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 251 VDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
V E K+ ++ A GV +LH L+IIHRDLK N
Sbjct: 122 VSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQN 163
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 23/141 (16%)
Query: 165 KLGEGGFGLVYKEI--------AVKRL-SKISEQGLKELKNEV-ILFSKLQHRNLVKLLG 214
++G G +G V K + AVKR+ S + E+ K+L ++ ++ +V+ G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 215 CCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARG 274
+ + + E M + S + F +V +++ + +E IL I T +
Sbjct: 89 ALFREGDCWICMELM-STSFDKFY--KYVYSVLDDVIPEE---ILG-----KITLATVKA 137
Query: 275 VMYLHQDSKLRIIHRDLKASN 295
+ +L ++ L+IIHRD+K SN
Sbjct: 138 LNHLKEN--LKIIHRDIKPSN 156
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLS-----KISEQGLKELKN----EVIL 200
+N+ LG G +V KE AVK + S + ++EL+ EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 201 FSKLQ-HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKIL 259
K+ H N+++L L+++ M L ++ E L+ ++E KI+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS------EKETRKIM 130
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+IC LH KL I+HRDLK N
Sbjct: 131 --RALLEVICA-------LH---KLNIVHRDLKPEN 154
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 251 VDQERCKILDWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
V E K+ ++ A GV +LH L+IIHRDLK N
Sbjct: 122 VSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQN 163
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 166 LGEGGFGLVY------KEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLVKLLGCCIQG 219
+G+G FG V ++AVK + ++ + E + ++L+H NLV+LLG ++
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 220 EEKL-LIYEFMPNKSLNSFI 238
+ L ++ E+M SL ++
Sbjct: 72 KGGLYIVTEYMAKGSLVDYL 91
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLS-----KISEQGLKELKN----EVIL 200
+N+ LG G +V KE AVK + S + ++EL+ EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 201 FSKLQ-HRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKIL 259
K+ H N+++L L+++ M L ++ E L+ ++E KI+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS------EKETRKIM 130
Query: 260 DWSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+IC LH KL I+HRDLK N
Sbjct: 131 --RALLEVICA-------LH---KLNIVHRDLKPEN 154
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 14/111 (12%)
Query: 172 GLVYKEIAVKRLSKISEQGLKELKNEVILFSKLQHRNLV----KLLGCCIQGEEKLLIYE 227
G VY E +K+LS + E+ KE+ + + + +R +V K+ + L+ Y
Sbjct: 186 GTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYS 245
Query: 228 FMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVMYL 278
+ +KSL S E L+ ++ D ++ + +CG R + Y+
Sbjct: 246 Y--SKSL-SLPGERIGYVLVPD-------EVYDKAELYAAVCGAGRALGYV 286
>pdb|1OAI|A Chain A, Complex Between Tap Uba Domain And Fxfg Nucleoporin
Peptide
Length = 59
Score = 28.9 bits (63), Expect = 3.2, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 24 QCLKGFKQKSRGYVDWSQGCVRDKSLNYSR 53
+ L+ F +S ++WSQ C++D + +Y+R
Sbjct: 9 EMLQAFSTQSGMNLEWSQKCLQDNNWDYTR 38
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 8/139 (5%)
Query: 158 DNFSINNKLGEGGFGLVYKEIAVKRLSKISE-QGLKELKNEVILFSKLQHRNLVKLLGCC 216
++F ++ LG+G FG V+ + K ++ +K LK +V+L +V+
Sbjct: 18 EDFELHKMLGKGSFGKVF----LAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 73
Query: 217 IQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVM 276
+ E L + F ++ + F L + C D S+ G+
Sbjct: 74 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 277 YLHQDSKLRIIHRDLKASN 295
+LH I++RDLK N
Sbjct: 134 FLHSKG---IVYRDLKLDN 149
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 152 TIANATDNFSINNKLGEGGFGLVY--------KEIAVKRLSKISEQGLKELKNEVILFSK 203
I + +D + + +G G FG+ + +AVK + + E+ +K E+I
Sbjct: 13 PIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER-GEKIAANVKREIINHRS 71
Query: 204 LQHRNLVKLLGCCIQGEEKLLIYEF 228
L+H N+V+ + ++ E+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEY 96
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 8/139 (5%)
Query: 158 DNFSINNKLGEGGFGLVYKEIAVKRLSKISE-QGLKELKNEVILFSKLQHRNLVKLLGCC 216
++F ++ LG+G FG V+ + K ++ +K LK +V+L +V+
Sbjct: 17 EDFILHKMLGKGSFGKVF----LAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 72
Query: 217 IQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILDWSKRFHIICGTARGVM 276
+ E L + F ++ + F L + C D S+ G+
Sbjct: 73 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 132
Query: 277 YLHQDSKLRIIHRDLKASN 295
+LH I++RDLK N
Sbjct: 133 FLHSKG---IVYRDLKLDN 148
>pdb|1JKG|B Chain B, Structural Basis For The Recognition Of A Nucleoporin Fg-
Repeat By The Ntf2-Like Domain Of Tap-P15 Mrna Nuclear
Export Factor
pdb|1JN5|B Chain B, Structural Basis For The Recognition Of A Nucleoporin Fg-
Repeat By The Ntf2-Like Domain Of Tap-P15 Mrna Export
Factor
Length = 250
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 24 QCLKGFKQKSRGYVDWSQGCVRDKSLNYSR 53
+ L+ F +S ++WSQ C++D + +Y+R
Sbjct: 200 EMLQAFSTQSGMNLEWSQKCLQDNNWDYTR 229
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 37/155 (23%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSKI---------SEQGLKELKNEVIL 200
D + ++ LG G G V K++A+K +SK ++ L ++ E+ +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 68
Query: 201 FSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
KL H ++K+ E+ ++ E M L + N L + CK+
Sbjct: 69 LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRL-------KEATCKLYF 120
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ V YLH++ IIHRDLK N
Sbjct: 121 YQMLL--------AVQYLHENG---IIHRDLKPEN 144
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 37/155 (23%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSKI---------SEQGLKELKNEVIL 200
D + ++ LG G G V K++A+K +SK ++ L ++ E+ +
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 67
Query: 201 FSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
KL H ++K+ E+ ++ E M L + N L + CK+
Sbjct: 68 LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRL-------KEATCKLYF 119
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ V YLH++ IIHRDLK N
Sbjct: 120 YQMLL--------AVQYLHENG---IIHRDLKPEN 143
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 37/155 (23%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSKI---------SEQGLKELKNEVIL 200
D + ++ LG G G V K++A+K +SK ++ L ++ E+ +
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 74
Query: 201 FSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
KL H ++K+ E+ ++ E M L + N L + CK+
Sbjct: 75 LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRL-------KEATCKLYF 126
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ V YLH++ IIHRDLK N
Sbjct: 127 YQMLL--------AVQYLHENG---IIHRDLKPEN 150
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 27.3 bits (59), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 37/155 (23%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSKI---------SEQGLKELKNEVIL 200
D + ++ LG G G V K++A+K +SK ++ L ++ E+ +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 68
Query: 201 FSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
KL H ++K+ E+ ++ E M L + N L + CK+
Sbjct: 69 LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRL-------KEATCKLYF 120
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ V YLH++ IIHRDLK N
Sbjct: 121 YQMLL--------AVQYLHENG---IIHRDLKPEN 144
>pdb|3V0A|B Chain B, 2.7 Angstrom Crystal Structure Of BontAI IN COMPLEX WITH
NTNHA
pdb|3V0B|B Chain B, 3.9 Angstrom Crystal Structure Of BontAI IN COMPLEX WITH
NTNHA
Length = 1196
Score = 27.3 bits (59), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 107 CAMWFGELIDMRDFPDAGQDLYIRMSASEIENRNMDLELPLFELATIANATDNFSINNKL 166
WFG+ +++ + D+ + + + A + N+ +L +P+ E I N +N+ L
Sbjct: 590 VVTWFGKALNILNTSDSFVEEFQNLGAISLINKKENLSMPIIESYEIPNDMLGLPLND-L 648
Query: 167 GEGGFGLVYKEIA 179
E F + K A
Sbjct: 649 NEKLFNIYSKNTA 661
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 27.3 bits (59), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 37/155 (23%)
Query: 158 DNFSINNKLGEGGFGLVY--------KEIAVKRLSKI---------SEQGLKELKNEVIL 200
D + ++ LG G G V K++A+K +SK ++ L ++ E+ +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 68
Query: 201 FSKLQHRNLVKLLGCCIQGEEKLLIYEFMPNKSLNSFIFENFVLTLMRSFVDQERCKILD 260
KL H ++K+ E+ ++ E M L + N L + CK+
Sbjct: 69 LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRL-------KEATCKLYF 120
Query: 261 WSKRFHIICGTARGVMYLHQDSKLRIIHRDLKASN 295
+ V YLH++ IIHRDLK N
Sbjct: 121 YQMLL--------AVQYLHENG---IIHRDLKPEN 144
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,779,881
Number of Sequences: 62578
Number of extensions: 366746
Number of successful extensions: 2145
Number of sequences better than 100.0: 739
Number of HSP's better than 100.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 540
Number of HSP's that attempted gapping in prelim test: 1553
Number of HSP's gapped (non-prelim): 745
length of query: 295
length of database: 14,973,337
effective HSP length: 98
effective length of query: 197
effective length of database: 8,840,693
effective search space: 1741616521
effective search space used: 1741616521
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (24.3 bits)