Citrus Sinensis ID: 041728

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------11
Protein Sequence
MTDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLASFLLKKK
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHcccccccccccHHHHHHHHHHccccccHHHHHHHHcccccccccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHcEccccccHHHHHHHHHHHHccccccccEEEccccccccccHHHHHccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MTDILLEFMNFFEGLAYTIkitekydvySFGVLVLEVIkgkhprdqMFFLQFQlhlpipldemldprlppdplfdVAFSclngnpesrLIITLTDGLKRLASFLLKKK
Flexible Loop (DISEMBL)
MTDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLASFLLKKK
Low Complexity Region (SEG)
MTDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIpldemldprlppdplfdVAFSCLNGNPESRLIITLTDGLKRLASFLLKKK
Disordered region (IsUnstruct)
***ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLASFLL***
Disordered Region (DISOPRED)
*TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLASFL****
Disordered Region (DISEMBL)
MTDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLASFLLKKK
Disordered Region (DISPRO)
*TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLASFLLKKK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLASFLLKKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	108	2.2.26 [Sep-21-2011]
Q9LP24	1120	Probable leucine-rich rep	yes	no	0.675	0.065	0.451	5e-10
Q8VZG8	1045	Probable LRR receptor-lik	no	no	0.685	0.070	0.452	6e-10
C0LGQ5	1249	LRR receptor-like serine/	no	no	0.675	0.058	0.318	4e-07
C0LGF4	591	LRR receptor-like serine/	no	no	0.629	0.115	0.392	1e-06
Q9SHI2	1101	Leucine-rich repeat recep	no	no	0.675	0.066	0.359	1e-06
C0LGX3	993	LRR receptor-like serine/	no	no	0.305	0.033	0.606	2e-05
Q9SYQ8	980	Receptor protein kinase C	no	no	0.675	0.074	0.336	4e-05
C0LGV1	1135	LRR receptor-like serine/	no	no	0.277	0.026	0.666	6e-05
Q9LHP4	1141	Receptor-like protein kin	no	no	0.277	0.026	0.666	6e-05
Q07E01	1382	Hepatocyte growth factor	yes	no	0.648	0.050	0.375	9e-05

>sp|Q9LP24|Y1571_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1

 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 9/82 (10%)

Query: 16   AYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPR-LPPD--- 71
            AYT+K+TEK DVYSFGVL+LE+I GKHP D +  L       + L  + D R L P    
Sbjct: 1028 AYTMKVTEKCDVYSFGVLILELIIGKHPGDLVSSLSSSPGEALSLRSISDERVLEPRGQN 1087

Query: 72   -----PLFDVAFSCLNGNPESR 88
                  + ++A  CL  NPESR
Sbjct: 1088 REKLLKMVEMALLCLQANPESR 1109

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q8VZG8|Y4885_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 10/84 (11%)

Query: 15   LAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQ-LHLPIPLDEMLDPRLP-PDP 72
            LAY +K+TEK DVYSFGVL LEVIKG+HP D +  L        + L  + D RLP P P
Sbjct: 951  LAYAMKVTEKCDVYSFGVLTLEVIKGEHPGDLVSTLSSSPPDATLSLKSISDHRLPEPTP 1010

Query: 73   --------LFDVAFSCLNGNPESR 88
                    +  VA  CL+ +P++R
Sbjct: 1011 EIKEEVLEILKVALLCLHSDPQAR 1034

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 18/91 (19%)

Query: 16   AYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL------HLPI---PLDEMLDP 66
            AY++K TEK DVYS G++++E++ GK P D +F  +  +      HL +     D+++DP
Sbjct: 1135 AYSLKATEKSDVYSMGIVLMEIVTGKMPTDSVFGAEMDMVRWVETHLEVAGSARDKLIDP 1194

Query: 67   RLPPDPLF---------DVAFSCLNGNPESR 88
            +L P   F         ++A  C   +P+ R
Sbjct: 1195 KLKPLLPFEEDAACQVLEIALQCTKTSPQER 1225

Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGF4|FEI1_ARATH LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 16/84 (19%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRDQMF---------FLQFQLHLPIPLDEMLDPRLPP 70
           + TEK DVYSFGVLVLEV+ GK P D  F         +L+F +    P D ++DP    
Sbjct: 481 RATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKRPRD-IVDPNCEG 539

Query: 71  ------DPLFDVAFSCLNGNPESR 88
                 D L  +A  C++ +PE R
Sbjct: 540 MQMESLDALLSIATQCVSPSPEER 563

Involved in the signaling pathway that regulates cell wall function, including cellulose biosynthesis, likely via an 1-aminocyclopropane-1-carboxylic acid (ACC)-mediated signal (a precursor of ethylene).

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 16/89 (17%)

Query: 16   AYTIKITEKYDVYSFGVLVLEVIKGKHP-------RDQMFFLQFQLHLPIPLDEMLDPRL 68
            AYT+K+TEK D+YSFGV++LE+I GK P        D + +++  +   IP  EM D RL
Sbjct: 974  AYTMKVTEKCDIYSFGVVLLELITGKPPVQPLEQGGDLVNWVRRSIRNMIPTIEMFDARL 1033

Query: 69   PPDP---------LFDVAFSCLNGNPESR 88
              +          +  +A  C + +P SR
Sbjct: 1034 DTNDKRTVHEMSLVLKIALFCTSNSPASR 1062

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGX3|HSL2_ARATH LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1

 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 24/33 (72%)

Query: 16  AYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF 48
            YT K+ EK DVYSFGV++LE+I GK P D  F
Sbjct: 870 GYTSKVNEKSDVYSFGVVLLELITGKRPNDSSF 902

Receptor-like serine/threonine-kinase acting on substrates that controls floral organ abscission. Regulated by the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) family of ligands.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SYQ8|CLV1_ARATH Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3

 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 19/92 (20%)

Query: 16  AYTIKITEKYDVYSFGVLVLEVIKGKHPRDQM--------FFLQFQLHLPIPLD-----E 62
           AYT+K+ EK DVYSFGV++LE+I GK P  +         +    +  +  P D      
Sbjct: 866 AYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGEGVDIVRWVRNTEEEITQPSDAAIVVA 925

Query: 63  MLDPRLPPDPL------FDVAFSCLNGNPESR 88
           ++DPRL   PL      F +A  C+     +R
Sbjct: 926 IVDPRLTGYPLTSVIHVFKIAMMCVEEEAAAR 957

Involved in the detection of CLV3 and CLV3-like peptides, that act as extracellular signals regulating meristem maintenance. Acts with CLV3 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGV1|RCH1_ARATH LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/30 (66%), Positives = 25/30 (83%)

Query: 16  AYTIKITEKYDVYSFGVLVLEVIKGKHPRD 45
            Y++KITEK DVYS+GV+VLEV+ GK P D
Sbjct: 969 GYSMKITEKSDVYSYGVVVLEVLTGKQPID 998

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LHP4|RCH2_ARATH Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/30 (66%), Positives = 25/30 (83%)

Query: 16  AYTIKITEKYDVYSFGVLVLEVIKGKHPRD 45
            Y++KITEK DVYS+GV+VLEV+ GK P D
Sbjct: 968 GYSMKITEKSDVYSYGVVVLEVLTGKQPID 997

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q07E01|MET_ORNAN Hepatocyte growth factor receptor OS=Ornithorhynchus anatinus GN=MET PE=3 SV=1

 Score = 45.8 bits (107), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 18   TIKITEKYDVYSFGVLVLEVI-KGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDV 76
            T K T K DV+SFGVL+ E++ +G  P   +      ++L +    +L P   PDPLF+V
Sbjct: 1258 TQKFTSKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLFEV 1316

Query: 77   AFSCLNGNPESR 88
               C + N E R
Sbjct: 1317 MLKCWHPNAEMR 1328

Receptor tyrosine kinase that transduces signals from the extracellular matrix into the cytoplasm by binding to hepatocyte growth factor/HGF ligand. Regulates many physiological processes including proliferation, scattering, morphogenesis and survival. Ligand binding at the cell surface induces autophosphorylation of MET on its intracellular domain that provides docking sites for downstream signaling molecules. Following activation by ligand, interacts with the PI3-kinase subunit PIK3R1, PLCG1, SRC, GRB2, STAT3 or the adapter GAB1. Recruitment of these downstream effectors by MET leads to the activation of several signaling cascades including the RAS-ERK, PI3 kinase-AKT, or PLCgamma-PKC. The RAS-ERK activation is associated with the morphogenetic effects while PI3K/AKT coordinates prosurvival effects. During embryonic development, MET signaling plays a role in gastrulation, development and migration of muscles and neuronal precursors, angiogenesis and kidney formation. In adults, participates in wound healing as well as organ regeneration and tissue remodeling. Promotes also differentiation and proliferation of hematopoietic cells.

Ornithorhynchus anatinus (taxid: 9258)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	108
297734328	2131	unnamed protein product [Vitis vinifera]	0.675	0.034	0.512	7e-15
225456161	1037	PREDICTED: probable LRR receptor-like se	0.675	0.070	0.512	2e-14
359491512	1078	PREDICTED: probable LRR receptor-like se	0.805	0.080	0.444	2e-13
147782364	501	hypothetical protein VITISV_038396 [Viti	0.675	0.145	0.493	3e-13
297734327	622	unnamed protein product [Vitis vinifera]	0.685	0.118	0.5	4e-13
225456159	1038	PREDICTED: probable LRR receptor-like se	0.685	0.071	0.5	6e-13
147772402	996	hypothetical protein VITISV_022117 [Viti	0.685	0.074	0.5	1e-12
356544279	945	PREDICTED: probable LRR receptor-like se	0.685	0.078	0.488	2e-12
297734329	264	unnamed protein product [Vitis vinifera]	0.675	0.276	0.481	2e-12
147767326	1032	hypothetical protein VITISV_008862 [Viti	0.657	0.068	0.494	3e-12

>gi|297734328|emb|CBI15575.3| unnamed protein product [Vitis vinifera]

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 53/82 (64%), Gaps = 9/82 (10%)

Query: 16  AYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPP----- 70
           AYT+K+TEK DVYSFGV+ LEVIKG+HP DQ+  +       I L +MLDPRLPP     
Sbjct: 683 AYTMKVTEKTDVYSFGVIALEVIKGRHPGDQILSISVSPEKNIVLKDMLDPRLPPLTPQD 742

Query: 71  ----DPLFDVAFSCLNGNPESR 88
                 +  +A +CLN NP+SR
Sbjct: 743 EGEVVAIIKLATACLNANPQSR 764

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456161|ref|XP_002278590.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera]

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 53/82 (64%), Gaps = 9/82 (10%)

Query: 16   AYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPP----- 70
            AYT+K+TEK DVYSFGV+ LEVIKG+HP DQ+  +       I L +MLDPRLPP     
Sbjct: 942  AYTMKVTEKTDVYSFGVIALEVIKGRHPGDQILSISVSPEKNIVLKDMLDPRLPPLTPQD 1001

Query: 71   ----DPLFDVAFSCLNGNPESR 88
                  +  +A +CLN NP+SR
Sbjct: 1002 EGEVVAIIKLATACLNANPQSR 1023

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491512|ref|XP_002278614.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera]

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/108 (44%), Positives = 62/108 (57%), Gaps = 21/108 (19%)

Query: 16   AYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP-IPLDEMLDPRLPP---- 70
            AYT+K+TEK DVYSFGV+ LEVIKG+HP DQ+  L        I L++MLDPRLPP    
Sbjct: 949  AYTMKVTEKTDVYSFGVITLEVIKGRHPGDQILSLSVSPEKENIVLEDMLDPRLPPLTAQ 1008

Query: 71   -----DPLFDVAFSCLNGNPESRLIITL-----------TDGLKRLAS 102
                   + ++A +CL+ NPESR  + +            DG KR  S
Sbjct: 1009 DEGEVISIINLATACLSVNPESRPTMKIISQMLSQRICSADGTKRATS 1056

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147782364|emb|CAN72719.1| hypothetical protein VITISV_038396 [Vitis vinifera]

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 10/83 (12%)

Query: 16  AYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP-IPLDEMLDPRLPP---- 70
           AYT+++TEK DVYSFGV+ LEVIKG+HP DQ+  +        I L++MLDPRLPP    
Sbjct: 62  AYTMRMTEKTDVYSFGVIALEVIKGRHPGDQILSISVSPQKENIVLEDMLDPRLPPLTAQ 121

Query: 71  -----DPLFDVAFSCLNGNPESR 88
                  +  +A +CLN NP+SR
Sbjct: 122 DEGEVISIIKLATACLNVNPQSR 144

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734327|emb|CBI15574.3| unnamed protein product [Vitis vinifera]

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 10/84 (11%)

Query: 15  LAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP-IPLDEMLDPRLPP--- 70
           LAYT+K+TEK DV+SFGV+ LEVIKG+HP DQ+  L        I L++MLDPRLPP   
Sbjct: 525 LAYTMKVTEKTDVFSFGVIALEVIKGRHPGDQILSLSVSPEKDNIALEDMLDPRLPPLTP 584

Query: 71  ------DPLFDVAFSCLNGNPESR 88
                   +   A  CL  NP+SR
Sbjct: 585 QDEGEVIAILKQAIECLKANPQSR 608

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456159|ref|XP_002278561.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera]

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 10/84 (11%)

Query: 15   LAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP-IPLDEMLDPRLPP--- 70
            LAYT+K+TEK DV+SFGV+ LEVIKG+HP DQ+  L        I L++MLDPRLPP   
Sbjct: 941  LAYTMKVTEKTDVFSFGVIALEVIKGRHPGDQILSLSVSPEKDNIALEDMLDPRLPPLTP 1000

Query: 71   ------DPLFDVAFSCLNGNPESR 88
                    +   A  CL  NP+SR
Sbjct: 1001 QDEGEVIAILKQAIECLKANPQSR 1024

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147772402|emb|CAN73988.1| hypothetical protein VITISV_022117 [Vitis vinifera]

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 10/84 (11%)

Query: 15  LAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP-IPLDEMLDPRLPP--- 70
           LAYT+K+TEK DV+SFGV+ LEVIKG+HP DQ+  L        I L++MLDPRLPP   
Sbjct: 899 LAYTMKVTEKTDVFSFGVIALEVIKGRHPGDQILSLSVSPEKDNIALEDMLDPRLPPLTP 958

Query: 71  ------DPLFDVAFSCLNGNPESR 88
                   +   A  CL  NP+SR
Sbjct: 959 QDEGEVIAIIKQATECLKANPQSR 982

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544279|ref|XP_003540581.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Glycine max]

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 10/84 (11%)

Query: 15  LAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPP---- 70
           LAYT+++TEK DV+SFGVL LEV+ GKHP D +  +Q      + L E+LDPRL P    
Sbjct: 844 LAYTMEVTEKCDVFSFGVLALEVLTGKHPGDLVSSIQTCTEQKVNLKEILDPRLSPPAKN 903

Query: 71  ------DPLFDVAFSCLNGNPESR 88
                 D + +VA SCL  NP+SR
Sbjct: 904 HILKEVDLIANVALSCLKTNPQSR 927

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734329|emb|CBI15576.3| unnamed protein product [Vitis vinifera]

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 10/83 (12%)

Query: 16  AYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP-IPLDEMLDPRLPP---- 70
           AYT+++T+K DVYSFGV+ LEVIKG+HP DQ+  L        I L++MLDPRLPP    
Sbjct: 168 AYTLRVTKKTDVYSFGVIALEVIKGRHPGDQILSLSVSPQKENIVLEDMLDPRLPPLIAQ 227

Query: 71  -----DPLFDVAFSCLNGNPESR 88
                  +  +  +CLN NP+SR
Sbjct: 228 DEGEVISIIKLVTACLNVNPQSR 250

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147767326|emb|CAN68996.1| hypothetical protein VITISV_008862 [Vitis vinifera]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 16/87 (18%)

Query: 15   LAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP----IPLDEMLDPRLPP 70
            LAYT+K+TEK DVYSFGVL LEV++G+HP D +  L      P    + L ++LDPRLPP
Sbjct: 935  LAYTMKVTEKCDVYSFGVLALEVMRGRHPGDLISSLSAS---PGKDNVVLKDVLDPRLPP 991

Query: 71   DPLFD---------VAFSCLNGNPESR 88
              L D         +A +CLNG+P+SR
Sbjct: 992  PTLRDEAEVMSVIQLATACLNGSPQSR 1018

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	108
TAIR|locus:2011339	1120	AT1G35710 [Arabidopsis thalian	0.277	0.026	0.766	2.7e-08
TAIR|locus:2138268	1045	AT4G08850 [Arabidopsis thalian	0.287	0.029	0.774	8.6e-07
TAIR|locus:2058759	589	FEI2 "FEI 2" [Arabidopsis thal	0.268	0.049	0.689	4e-05
TAIR|locus:2169975	993	HSL2 "HAESA-like 2" [Arabidops	0.296	0.032	0.625	8.6e-05
TAIR|locus:2038706	716	AT2G01210 [Arabidopsis thalian	0.231	0.034	0.48	8.8e-05
TAIR|locus:2102499	964	AT3G56370 [Arabidopsis thalian	0.277	0.031	0.7	0.00011
TAIR|locus:2020417	1101	AT1G17230 [Arabidopsis thalian	0.259	0.025	0.678	0.00016
TAIR|locus:2154344	1135	AT5G48940 [Arabidopsis thalian	0.268	0.025	0.689	0.00016
TAIR|locus:2085949	1141	AT3G24240 [Arabidopsis thalian	0.268	0.025	0.689	0.00016
TAIR|locus:2206179	592	FEI1 "FEI 1" [Arabidopsis thal	0.268	0.048	0.689	0.0002

TAIR|locus:2011339 AT1G35710 [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
 Identities = 23/30 (76%), Positives = 27/30 (90%)

Query:    16 AYTIKITEKYDVYSFGVLVLEVIKGKHPRD 45
             AYT+K+TEK DVYSFGVL+LE+I GKHP D
Sbjct:  1028 AYTMKVTEKCDVYSFGVLILELIIGKHPGD 1057

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

TAIR|locus:2138268 AT4G08850 [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 8.6e-07, P = 8.6e-07
 Identities = 24/31 (77%), Positives = 27/31 (87%)

Query:    15 LAYTIKITEKYDVYSFGVLVLEVIKGKHPRD 45
             LAY +K+TEK DVYSFGVL LEVIKG+HP D
Sbjct:   951 LAYAMKVTEKCDVYSFGVLTLEVIKGEHPGD 981

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

TAIR|locus:2058759 FEI2 "FEI 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 98 (39.6 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
 Identities = 20/29 (68%), Positives = 22/29 (75%)

Query:    20 KITEKYDVYSFGVLVLEVIKGKHPRDQMF 48
             + TEK DVYSFGVLVLEV+ GK P D  F
Sbjct:   479 RATEKTDVYSFGVLVLEVLSGKLPTDASF 507

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009664 "plant-type cell wall organization" evidence=RCA;IMP

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0000272 "polysaccharide catabolic process" evidence=RCA

GO:0005982 "starch metabolic process" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2169975 HSL2 "HAESA-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 8.6e-05, P = 8.6e-05
 Identities = 20/32 (62%), Positives = 24/32 (75%)

Query:    17 YTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF 48
             YT K+ EK DVYSFGV++LE+I GK P D  F
Sbjct:   871 YTSKVNEKSDVYSFGVVLLELITGKRPNDSSF 902

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2038706 AT2G01210 [Arabidopsis thaliana (taxid:3702)]

 Score = 78 (32.5 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
 Identities = 12/25 (48%), Positives = 22/25 (88%)

Query:    19 IKITEKYDVYSFGVLVLEVIKGKHP 43
             +K ++K+DVYS+G+++LE+I G+ P
Sbjct:   613 VKPSQKWDVYSYGIILLELIAGRSP 637

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0006346 "methylation-dependent chromatin silencing" evidence=RCA

GO:0016246 "RNA interference" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0048451 "petal formation" evidence=RCA

GO:0048453 "sepal formation" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

TAIR|locus:2102499 AT3G56370 [Arabidopsis thaliana (taxid:3702)]

 Score = 106 (42.4 bits), Expect = 0.00011, P = 0.00011
 Identities = 21/30 (70%), Positives = 24/30 (80%)

Query:    18 TIKITEKYDVYSFGVLVLEVIKGKHPRDQM 47
             T+KITEK DVY FGVLVLEV+ GK P + M
Sbjct:   854 TVKITEKCDVYGFGVLVLEVVTGKKPVEYM 883

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0000272 "polysaccharide catabolic process" evidence=RCA

GO:0005982 "starch metabolic process" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008356 "asymmetric cell division" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2020417 AT1G17230 [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 0.00016, P = 0.00016
 Identities = 19/28 (67%), Positives = 25/28 (89%)

Query:    16 AYTIKITEKYDVYSFGVLVLEVIKGKHP 43
             AYT+K+TEK D+YSFGV++LE+I GK P
Sbjct:   974 AYTMKVTEKCDIYSFGVVLLELITGKPP 1001

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

TAIR|locus:2154344 AT5G48940 [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 0.00016, P = 0.00016
 Identities = 20/29 (68%), Positives = 25/29 (86%)

Query:    17 YTIKITEKYDVYSFGVLVLEVIKGKHPRD 45
             Y++KITEK DVYS+GV+VLEV+ GK P D
Sbjct:   970 YSMKITEKSDVYSYGVVVLEVLTGKQPID 998

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

TAIR|locus:2085949 AT3G24240 [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 0.00016, P = 0.00016
 Identities = 20/29 (68%), Positives = 25/29 (86%)

Query:    17 YTIKITEKYDVYSFGVLVLEVIKGKHPRD 45
             Y++KITEK DVYS+GV+VLEV+ GK P D
Sbjct:   969 YSMKITEKSDVYSYGVVVLEVLTGKQPID 997

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0010359 "regulation of anion channel activity" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

TAIR|locus:2206179 FEI1 "FEI 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 101 (40.6 bits), Expect = 0.00020, P = 0.00020
 Identities = 20/29 (68%), Positives = 22/29 (75%)

Query:    20 KITEKYDVYSFGVLVLEVIKGKHPRDQMF 48
             + TEK DVYSFGVLVLEV+ GK P D  F
Sbjct:   482 RATEKTDVYSFGVLVLEVLSGKRPTDASF 510

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009664 "plant-type cell wall organization" evidence=RCA;IMP

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0016301 "kinase activity" evidence=IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0000272 "polysaccharide catabolic process" evidence=RCA

GO:0005982 "starch metabolic process" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0046777 "protein autophosphorylation" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	108
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-05
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	7e-05
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	1e-04
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-04
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	3e-04
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-04
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	7e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	8e-04
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	0.001
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	0.001
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	0.002
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	0.002
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	0.003
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	0.004

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 39.9 bits (94), Expect = 5e-05
 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 7/83 (8%)

Query: 13  EGLAYTIKITEKYDVYSFGVLVLEVIKGKHP------RDQMFFLQFQLHLPIPLDEMLDP 66
           E L        K DV+S GV++ E++ GK P       DQ+  ++  L  P+  DE    
Sbjct: 168 EVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDE-PKW 226

Query: 67  RLPPDPLFDVAFSCLNGNPESRL 89
               +   D+   CLN +P  R 
Sbjct: 227 SSGSEEAKDLIKKCLNKDPSKRP 249

Length = 260

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 39.8 bits (94), Expect = 7e-05
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 14/76 (18%)

Query: 20  KITEKYDVYSFGVLVLEVI-------KGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDP 72
           K T K DV+SFGVL+ E+         G    + +  L+    LP        P   PD 
Sbjct: 180 KFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPR-------PENCPDE 232

Query: 73  LFDVAFSCLNGNPESR 88
           L+++   C   +PE R
Sbjct: 233 LYELMLQCWAYDPEDR 248

Length = 258

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 39.0 bits (91), Expect = 1e-04
 Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 16/79 (20%)

Query: 18  TIKITEKYDVYSFGVLVLEVI-KGKHPRDQM-------FFLQFQLHLPIPLDEMLDPRLP 69
           T K T K DV+SFGVL+ E++ +G  P   +       + LQ +         +L P   
Sbjct: 176 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR--------RLLQPEYC 227

Query: 70  PDPLFDVAFSCLNGNPESR 88
           PDPL++V  SC +  PE R
Sbjct: 228 PDPLYEVMLSCWHPKPEMR 246

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 4/69 (5%)

Query: 22  TEKYDVYSFGVLVLEVI-KGKHPRDQMFFLQFQLHLPIPLDEMLD-PRLPPDPLFDVAFS 79
           T K DV+SFGVL+ E+   G+ P   M     ++   +     L  P   P  L+D+   
Sbjct: 181 TSKSDVWSFGVLLWEIFTLGEQPYPGM--SNEEVLEYLKNGYRLPQPPNCPPELYDLMLQ 238

Query: 80  CLNGNPESR 88
           C   +PE R
Sbjct: 239 CWAEDPEDR 247

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 38.2 bits (89), Expect = 3e-04
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 6/72 (8%)

Query: 20  KITEKYDVYSFGVLVLEVI-KGKHPRDQMFFLQF--QLHLPIPLDEMLDPRLPPDPLFDV 76
           + + K DV+SFGVL+ EV  +GK P ++    +    +     L     P+L P  ++ +
Sbjct: 177 RFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYR---PKLAPTEVYTI 233

Query: 77  AFSCLNGNPESR 88
            +SC +  PE R
Sbjct: 234 MYSCWHEKPEDR 245

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 20/77 (25%)

Query: 22  TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLD----------PRLPPD 71
           T K DV+SFGVL+ E          +F L  + +  +   E+L+          P   P 
Sbjct: 182 TSKSDVWSFGVLLWE----------IFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNCPP 231

Query: 72  PLFDVAFSCLNGNPESR 88
            L+ +   C   +PE R
Sbjct: 232 ELYKLMLQCWAEDPEDR 248

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 6/76 (7%)

Query: 26  DVYSFGVLVLEVIKGKHP---RDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN 82
           D++S GV++ E++ GK P    DQ+  L  ++  P P     +  + P+   D+    L 
Sbjct: 178 DIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPE-AKDLIRKLLV 236

Query: 83  GNPESRLIITLTDGLK 98
            +PE R  +T  + L+
Sbjct: 237 KDPEKR--LTAEEALQ 250

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 36.5 bits (85), Expect = 8e-04
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 14/76 (18%)

Query: 20  KITEKYDVYSFGVLVLEVI-KGKHPRDQMFFLQFQLHLPIPLDE-MLDPRLP-----PDP 72
           + T K DV+SFG+L+ E++  G+ P   M            L++     R+P     P+ 
Sbjct: 180 RFTIKSDVWSFGILLTEIVTYGRVPYPGM-------TNREVLEQVERGYRMPRPPNCPEE 232

Query: 73  LFDVAFSCLNGNPESR 88
           L+D+   C + +PE R
Sbjct: 233 LYDLMLQCWDKDPEER 248

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 36.2 bits (84), Expect = 0.001
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 16/77 (20%)

Query: 20  KITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDP--RLP-----PD 71
           + + K DV+SFG+L+ E++  G+ P   M   +        + + +D   R+P     P 
Sbjct: 180 RFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE--------VLQQVDQGYRMPCPPGCPK 231

Query: 72  PLFDVAFSCLNGNPESR 88
            L+D+   C   +P+ R
Sbjct: 232 ELYDIMLDCWKEDPDDR 248

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 36.0 bits (83), Expect = 0.001
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)

Query: 20  KITEKYDVYSFGVLVLEVI-KGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAF 78
           K + K DV+SFGVL+ EV  +GK P ++    +  + +      +  P+L    +++V +
Sbjct: 177 KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV-VEMISRGFRLYRPKLASMTVYEVMY 235

Query: 79  SCLNGNPESR 88
           SC +  PE R
Sbjct: 236 SCWHEKPEGR 245

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 35.6 bits (82), Expect = 0.002
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 20  KITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAF 78
           K + K DV++FGVL+ EV   GK P ++    +    +   L  +  P L  + ++ + +
Sbjct: 177 KFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGL-RLYRPHLASEKVYAIMY 235

Query: 79  SCLNGNPESR 88
           SC +   E R
Sbjct: 236 SCWHEKAEER 245

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 35.6 bits (83), Expect = 0.002
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 22/78 (28%)

Query: 22  TEKYDVYSFGVLVLEVI-KGKHPRDQMFFLQFQLHLPIPLDEMLD----------PRLPP 70
           T K DV+SFGVL+ E+   G  P           +  +  +E+L+          P   P
Sbjct: 185 TSKSDVWSFGVLLWEIFTLGATP-----------YPGLSNEEVLEYLRKGYRLPKPEYCP 233

Query: 71  DPLFDVAFSCLNGNPESR 88
           D L+++  SC   +PE R
Sbjct: 234 DELYELMLSCWQLDPEDR 251

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 35.2 bits (81), Expect = 0.003
 Identities = 15/31 (48%), Positives = 22/31 (70%)

Query: 18  TIKITEKYDVYSFGVLVLEVIKGKHPRDQMF 48
           T  ITEK D+Y FG++++E++ GK P D  F
Sbjct: 852 TKDITEKSDIYGFGLILIELLTGKSPADAEF 882

Length = 968

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 35.0 bits (80), Expect = 0.004
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 14/79 (17%)

Query: 20  KITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLD------EMLDPRLPPDP 72
           K T + D++SFGV++ E+   GK P        +QL     ++      E+  PR  P  
Sbjct: 200 KFTTESDIWSFGVVLWEIFTYGKQP-------WYQLSNTEAIECITQGRELERPRTCPPE 252

Query: 73  LFDVAFSCLNGNPESRLII 91
           ++ +   C    P+ R++I
Sbjct: 253 VYAIMQGCWQREPQQRMVI 271

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	108
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.93
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.91
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.91
KOG0578	550	consensus p21-activated serine/threonine protein k	99.91
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.9
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.9
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.89
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.87
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.86
PHA02988	283	hypothetical protein; Provisional	99.85
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.85
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.85
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.85
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.85
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.84
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.84
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.83
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.83
KOG0198	313	consensus MEKK and related serine/threonine protei	99.83
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.82
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.82
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.81
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.8
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.8
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.8
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.79
PTZ00283	496	serine/threonine protein kinase; Provisional	99.79
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.79
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.78
KOG0610	459	consensus Putative serine/threonine protein kinase	99.78
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.78
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.78
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.78
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.77
KOG0589	426	consensus Serine/threonine protein kinase [General	99.77
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.77
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.77
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.77
PTZ00267	478	NIMA-related protein kinase; Provisional	99.77
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.77
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.77
PTZ00284	467	protein kinase; Provisional	99.76
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.76
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.76
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.76
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.76
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.76
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.76
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.76
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.76
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.75
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.75
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.75
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.75
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.75
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.75
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.75
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.75
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.75
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.75
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.75
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.75
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.75
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.75
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.75
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.74
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.74
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.74
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.74
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.74
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.74
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.74
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.74
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.74
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.73
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.73
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.73
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.73
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.73
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.73
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.73
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.73
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.73
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.73
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.73
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.73
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.73
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.73
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.73
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.73
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.73
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.73
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.73
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.73
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.72
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.72
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.72
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.72
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.72
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.72
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.72
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.72
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.72
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.72
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.72
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.72
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.72
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.72
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.72
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.72
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.72
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.72
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.72
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.72
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.72
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.72
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.72
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.71
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.71
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.71
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.71
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.71
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.71
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.71
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.71
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.71
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.71
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.71
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.71
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.71
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.71
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.71
PTZ00036	440	glycogen synthase kinase; Provisional	99.71
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.7
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.7
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.7
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.7
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.7
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.7
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.7
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.7
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.7
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.7
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.7
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.7
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.7
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.7
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.7
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.7
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.7
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.7
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.7
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.7
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.7
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.7
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.7
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.7
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.7
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.7
KOG0605	550	consensus NDR and related serine/threonine kinases	99.7
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.7
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.7
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.7
PHA02882	294	putative serine/threonine kinase; Provisional	99.7
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.7
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.7
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.7
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.69
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.69
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.69
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.69
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.69
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.69
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.69
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.69
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.69
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.69
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.69
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.69
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.69
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.69
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.69
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.69
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.68
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.68
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.68
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.68
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.68
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.68
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.68
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.68
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.68
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.68
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.68
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.68
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.68
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.68
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.67
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.67
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.67
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.67
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.67
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.67
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.67
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.67
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.67
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.67
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.67
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.67
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.67
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.67
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.67
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.66
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.66
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.66
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.66
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.66
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.66
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.66
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.66
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.66
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.66
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.66
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.66
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.66
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.66
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.66
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.66
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.66
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.66
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.66
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.66
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.66
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.66
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.66
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.65
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.65
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.65
PLN00181	793	protein SPA1-RELATED; Provisional	99.65
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.65
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.65
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.65
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.65
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.65
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.65
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.65
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.65
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.65
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.65
PHA03207	392	serine/threonine kinase US3; Provisional	99.65
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.64
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.64
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.64
PHA03212	391	serine/threonine kinase US3; Provisional	99.64
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.64
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.64
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.64
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.63
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.63
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.63
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.63
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.63
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.63
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.63
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.63
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.62
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.62
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.62
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.62
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.62
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.62
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.62
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.62
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.62
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.61
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.61
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.61
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.61
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.61
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.61
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.61
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.61
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.61
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.61
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.61
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.6
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.6
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.6
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.6
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.6
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.6
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.6
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.6
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.6
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.6
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.6
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.6
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.6
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.6
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.6
PHA03209	357	serine/threonine kinase US3; Provisional	99.59
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.59
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.59
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.59
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.59
KOG0584	632	consensus Serine/threonine protein kinase [General	99.59
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.58
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.58
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.58
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.58
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.58
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.58
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.58
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.58
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.58
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.58
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.58
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.58
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.57
PLN00009	294	cyclin-dependent kinase A; Provisional	99.57
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.57
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.57
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.57
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.57
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.57
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.56
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.56
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.56
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.56
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.56
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.56
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.56
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.56
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.56
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.56
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.56
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.55
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.55
PHA03211	461	serine/threonine kinase US3; Provisional	99.55
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.55
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.55
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.54
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.54
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.54
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.54
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.54
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.54
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.54
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.53
PHA03210	501	serine/threonine kinase US3; Provisional	99.52
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.52
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.52
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.52
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.51
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.51
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.51
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.51
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.5
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.5
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.5
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.49
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.49
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.48
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.48
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.48
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.47
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.47
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.47
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.44
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.43
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.43
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.43
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.42
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.42
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.4
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.38
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.38
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.34
KOG0586	596	consensus Serine/threonine protein kinase [General	99.32
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.31
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.29
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.28
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.28
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.27
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.22
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.22
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.21
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.15
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.06
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	98.99
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	98.98
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	98.96
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.96
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	98.95
KOG0607	463	consensus MAP kinase-interacting kinase and relate	98.95
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	98.94
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	98.85
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.84
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.79
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.78
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	98.78
KOG3653	534	consensus Transforming growth factor beta/activin	98.71
KOG1167	418	consensus Serine/threonine protein kinase of the C	98.62
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.6
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	98.51
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	98.49
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.49
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	98.35
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.27
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.06
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.03
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.99
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	97.98
KOG1152	772	consensus Signal transduction serine/threonine kin	97.9
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	97.48
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.42
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	97.07
COG4248	637	Uncharacterized protein with protein kinase and he	96.32
KOG2137	700	consensus Protein kinase [Signal transduction mech	96.21
KOG1266	458	consensus Protein kinase [Signal transduction mech	96.17
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	95.8
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	91.07
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	88.63
KOG1093	725	consensus Predicted protein kinase (contains TBC a	83.05

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=6e-26  Score=135.55  Aligned_cols=100  Identities=19%  Similarity=0.268  Sum_probs=88.9

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      .+++||+.|||||++....|+.++||||+|++.+++.+|.+|+...++++....+....++.++.... ..+.+|+..|+
T Consensus       169 ~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S-~~~kEFV~~CL  247 (467)
T KOG0201|consen  169 KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFS-PPFKEFVEACL  247 (467)
T ss_pred             ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccC-HHHHHHHHHHh
Confidence            46899999999999998899999999999999999999999999999888777777666666666444 66999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      .+||+.||++.+++++++|..
T Consensus       248 ~k~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  248 DKNPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             hcCcccCcCHHHHhhhHHHHh
Confidence            999999999999988888876

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.91  E-value=1.2e-24  Score=132.08  Aligned_cols=97  Identities=24%  Similarity=0.263  Sum_probs=84.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..-++.|.|||.++.++|+.++||||||+++||+++ |+.|+.++...+.+..+..+ .++..|..++++++++|..||.
T Consensus       364 ~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~G-yRlp~P~~CP~~vY~lM~~CW~  442 (468)
T KOG0197|consen  364 GKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERG-YRLPRPEGCPDEVYELMKSCWH  442 (468)
T ss_pred             CCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhcc-CcCCCCCCCCHHHHHHHHHHhh
Confidence            345789999999999999999999999999999998 99999999888888877776 6677777777999999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      .+|++||||+.+ ..++.+.
T Consensus       443 ~~P~~RPtF~~L~~~l~~~~  462 (468)
T KOG0197|consen  443 EDPEDRPTFETLREVLEDFF  462 (468)
T ss_pred             CCcccCCCHHHHHHHHHHhh
Confidence            999999999988 5555443

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.91  E-value=2.8e-24  Score=128.95  Aligned_cols=102  Identities=21%  Similarity=0.241  Sum_probs=83.5

Q ss_pred             ccccccceecccccc--cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            3 DILLEFMNFFEGLAY--TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         3 ~~~~~~~~~ape~~~--~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ...||+.|||||++.  ...|+.++||||||+++||+++|..||.+....+..........+...+..++..+..+|..|
T Consensus       203 ~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~C  282 (362)
T KOG0192|consen  203 SVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERC  282 (362)
T ss_pred             CCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHh
Confidence            468999999999999  568999999999999999999999999998876666644433344443443558899999999


Q ss_pred             cCCCCCCCCCHhhH-HHHHHHHHHH
Q 041728           81 LNGNPESRLIITLT-DGLKRLASFL  104 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l-~~l~~l~~~~  104 (108)
                      |..||..||++.++ ..+..+....
T Consensus       283 W~~dp~~RP~f~ei~~~l~~~~~~~  307 (362)
T KOG0192|consen  283 WLVDPSRRPSFLEIVSRLESIMSHI  307 (362)
T ss_pred             CCCCCCcCCCHHHHHHHHHHHHHhh
Confidence            99999999999999 7777765543

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.2e-24  Score=133.08  Aligned_cols=101  Identities=16%  Similarity=0.127  Sum_probs=87.4

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCC-CCCcCCCCCCCchHHHHHHhhh
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPI-PLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ++.+|||+|||||++....|..++||||+|+..+||+.|.+||.+.++.+.+..+.. +.+++-.+......+.+|+..|
T Consensus       427 ~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~c  506 (550)
T KOG0578|consen  427 STMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRC  506 (550)
T ss_pred             ccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999999888888775443 3444445555558899999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ++.|+.+|+++++|+++.+|..
T Consensus       507 L~~dv~~RasA~eLL~HpFl~~  528 (550)
T KOG0578|consen  507 LVVDVEQRASAKELLEHPFLKM  528 (550)
T ss_pred             hhcchhcCCCHHHHhcChhhhh
Confidence            9999999999999988888744

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.90  E-value=2.6e-24  Score=133.07  Aligned_cols=94  Identities=18%  Similarity=0.168  Sum_probs=84.0

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      +|+||+.|||||++.....+.++||||||+++|||++|..||.......++.-.......+..|..+++.+.-|++.||.
T Consensus       270 SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~  349 (904)
T KOG4721|consen  270 SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWN  349 (904)
T ss_pred             hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHh
Confidence            68999999999999999999999999999999999999999998877666666666667777787777889999999999


Q ss_pred             CCCCCCCCHhhHHH
Q 041728           83 GNPESRLIITLTDG   96 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~   96 (108)
                      ..|.+||+|.+|+.
T Consensus       350 sKpRNRPSFrqil~  363 (904)
T KOG4721|consen  350 SKPRNRPSFRQILL  363 (904)
T ss_pred             cCCCCCccHHHHHH
Confidence            99999999999943

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.90  E-value=1.1e-23  Score=123.61  Aligned_cols=103  Identities=14%  Similarity=0.081  Sum_probs=85.2

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcc-----hhHHhhhhcCCCCCcCCCCCCCchHHHHH
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQM-----FFLQFQLHLPIPLDEMLDPRLPPDPLFDV   76 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   76 (108)
                      .+++||..|||||.+.+..|+.++||||+|..++|+..|+.|+...     ........+.....+.+......+++.+|
T Consensus       235 ~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~F  314 (364)
T KOG0581|consen  235 NTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSF  314 (364)
T ss_pred             ccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHH
Confidence            4789999999999999999999999999999999999999998764     44455555555444444444455889999


Q ss_pred             HhhhcCCCCCCCCCHhhHHHHHHHHHHH
Q 041728           77 AFSCLNGNPESRLIITLTDGLKRLASFL  104 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~~~~l~~l~~l~~~~  104 (108)
                      +..|+++||.+||++.++..+.+|....
T Consensus       315 V~~CL~Kdp~~R~s~~qLl~Hpfi~~~~  342 (364)
T KOG0581|consen  315 VSCCLRKDPSERPSAKQLLQHPFIKKFE  342 (364)
T ss_pred             HHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence            9999999999999999998888887643

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.89  E-value=1e-23  Score=133.71  Aligned_cols=95  Identities=23%  Similarity=0.283  Sum_probs=84.0

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      .++.||+||.+.+++|+..+||||+|+++||+++ |+.||.+...-+.+..+..+.. ...|..++.+++++|..||+.+
T Consensus       667 lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~  745 (774)
T KOG1026|consen  667 LPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL-LSCPENCPTEVYSLMLECWNEN  745 (774)
T ss_pred             eeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcC
Confidence            4678999999999999999999999999999998 9999999988888887776655 6667777799999999999999


Q ss_pred             CCCCCCHhhH-HHHHHHH
Q 041728           85 PESRLIITLT-DGLKRLA  101 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l~  101 (108)
                      |.+||+|+|| ..|+...
T Consensus       746 P~~RPsF~eI~~~L~~~~  763 (774)
T KOG1026|consen  746 PKRRPSFKEIHSRLQAWA  763 (774)
T ss_pred             cccCCCHHHHHHHHHHHH
Confidence            9999999999 7666653

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.6e-22  Score=131.79  Aligned_cols=99  Identities=21%  Similarity=0.282  Sum_probs=84.7

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..++.||+||.+....|+.++||||||+++||+++ |..||.+.+..+.......+. ++.+|.-+++.++++|..||+.
T Consensus       865 ~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~  943 (1025)
T KOG1095|consen  865 MLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RLDPPSYCPEKLYQLMLQCWKH  943 (1025)
T ss_pred             ccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-ccCCCCCCChHHHHHHHHHccC
Confidence            34679999999999999999999999999999998 999999998888777444443 6777777778899999999999


Q ss_pred             CCCCCCCHhhH-HHHHHHHHHH
Q 041728           84 NPESRLIITLT-DGLKRLASFL  104 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l~~~~  104 (108)
                      +|++||+|..| .+++.+...+
T Consensus       944 ~pe~RP~F~~i~~q~~~i~~~~  965 (1025)
T KOG1095|consen  944 DPEDRPSFRTIVEQDPAISNAA  965 (1025)
T ss_pred             ChhhCccHHHHHhhhhhhhhhh
Confidence            99999999999 6666665543

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.86  E-value=1.2e-21  Score=116.97  Aligned_cols=95  Identities=24%  Similarity=0.256  Sum_probs=82.5

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      .+..||++|.+....|+..+|+|+||+++||+++ |+.|+.+.++.+...++..+ .+..+|.-++++++.+|..||...
T Consensus       460 RPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdG-yRlaQP~NCPDeLf~vMacCWall  538 (563)
T KOG1024|consen  460 RPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDG-YRLAQPFNCPDELFTVMACCWALL  538 (563)
T ss_pred             CcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhcc-ceecCCCCCcHHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999998 99999999887776665554 677788878899999999999999


Q ss_pred             CCCCCCHhhH-HHHHHHH
Q 041728           85 PESRLIITLT-DGLKRLA  101 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l~  101 (108)
                      |++||+++++ .-|..+-
T Consensus       539 peeRPsf~Qlv~cLseF~  556 (563)
T KOG1024|consen  539 PEERPSFSQLVICLSEFH  556 (563)
T ss_pred             cccCCCHHHHHHHHHHHH
Confidence            9999999998 4454443

>PHA02988 hypothetical protein; Provisional

Probab=99.85  E-value=4e-21  Score=112.78  Aligned_cols=98  Identities=18%  Similarity=0.141  Sum_probs=73.5

Q ss_pred             cccccceeccccccc--CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYT--IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..|+..|+|||.+..  ..++.++||||+|+++|++++|..||.+...............+...+...+..+.+++.+||
T Consensus       180 ~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl  259 (283)
T PHA02988        180 NVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACT  259 (283)
T ss_pred             ccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHh
Confidence            457889999999875  678899999999999999999999998765444433221111222222223477999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      +.||.+||+++++ ..|+.+.
T Consensus       260 ~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        260 SHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             cCCcccCcCHHHHHHHHHHHH
Confidence            9999999999999 5555543

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.85  E-value=3.2e-21  Score=120.64  Aligned_cols=99  Identities=19%  Similarity=0.171  Sum_probs=84.7

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ....+..||+||.++..+|+.++|+|.||+.+||++. |..||++....+.+.+++++..-..++.+| ..++.+|.+||
T Consensus       551 ~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCP-p~LYslmskcW  629 (974)
T KOG4257|consen  551 RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCP-PALYSLMSKCW  629 (974)
T ss_pred             ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCC-hHHHHHHHHHh
Confidence            3456789999999999999999999999999999986 999999998888888777775555555555 77899999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      ..+|.+||.+++| ..|..+..
T Consensus       630 ayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  630 AYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             ccCcccCCcHHHHHHHHHHHHH
Confidence            9999999999999 76666554

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=1.2e-21  Score=122.03  Aligned_cols=99  Identities=17%  Similarity=0.123  Sum_probs=87.9

Q ss_pred             cccccccceecccccc---cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHh
Q 041728            2 TDILLEFMNFFEGLAY---TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAF   78 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~---~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   78 (108)
                      .+|+|||+|||||++.   .+.|+.++||||+|+.+.++.-.++|+.+++.+....++.....+.+...-+.+++.+|+.
T Consensus       180 nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd  259 (948)
T KOG0577|consen  180 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVD  259 (948)
T ss_pred             hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHH
Confidence            4799999999999987   4789999999999999999999999999999999999888777777766666688999999


Q ss_pred             hhcCCCCCCCCCHhhHHHHHHH
Q 041728           79 SCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        79 ~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      .|+++-|.+||+..+++.+.++
T Consensus       260 ~CLqKipqeRptse~ll~H~fv  281 (948)
T KOG0577|consen  260 SCLQKIPQERPTSEELLKHRFV  281 (948)
T ss_pred             HHHhhCcccCCcHHHHhhcchh
Confidence            9999999999999887665554

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=1.6e-21  Score=120.45  Aligned_cols=98  Identities=11%  Similarity=0.046  Sum_probs=81.6

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      .+.||||.|.|||++....++.-+||||+||++|.++.|++||+......++..+.....  .-|.....+..+|+.+++
T Consensus       176 ~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y--~~P~~ls~~A~dLI~~lL  253 (592)
T KOG0575|consen  176 KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEY--SMPSHLSAEAKDLIRKLL  253 (592)
T ss_pred             ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCc--ccccccCHHHHHHHHHHh
Confidence            368999999999999988899999999999999999999999998876666665444322  223344478999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ..+|.+||++++|+.++++.
T Consensus       254 ~~~P~~Rpsl~~vL~h~Ff~  273 (592)
T KOG0575|consen  254 RPNPSERPSLDEVLDHPFFK  273 (592)
T ss_pred             cCCcccCCCHHHHhcCHhhh
Confidence            99999999999997777763

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=1.8e-21  Score=111.91  Aligned_cols=90  Identities=16%  Similarity=0.070  Sum_probs=73.2

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      .+.+|||.||+||.+....|+.++||||+||++|||+.-++||.+.+....-..+.....+.+....-+..+..++..|+
T Consensus       186 ~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci  265 (375)
T KOG0591|consen  186 HSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCI  265 (375)
T ss_pred             HhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHc
Confidence            36889999999999999999999999999999999999999999886555444555553333332333466889999999


Q ss_pred             CCCCCCCCCH
Q 041728           82 NGNPESRLII   91 (108)
Q Consensus        82 ~~~p~~Rp~~   91 (108)
                      ..|++.||+.
T Consensus       266 ~vd~~~RP~t  275 (375)
T KOG0591|consen  266 AVDPEQRPDT  275 (375)
T ss_pred             cCCcccCCCc
Confidence            9999999984

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=5.9e-21  Score=114.93  Aligned_cols=101  Identities=14%  Similarity=0.056  Sum_probs=79.0

Q ss_pred             cccccccceeccccccc--CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCC--------Cch
Q 041728            2 TDILLEFMNFFEGLAYT--IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRL--------PPD   71 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~   71 (108)
                      .+++||+.|||||++..  ..|+.++||||||+...|+.+|..||....+.+.......+.++.+.-..        ...
T Consensus       188 ~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~k  267 (516)
T KOG0582|consen  188 NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSK  267 (516)
T ss_pred             ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcH
Confidence            46799999999999654  56899999999999999999999999999888776643333333221111        114


Q ss_pred             HHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           72 PLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        72 ~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      .+..++..|+++||.+||++++++++.++..
T Consensus       268 sf~e~i~~CL~kDP~kRptAskLlkh~FFk~  298 (516)
T KOG0582|consen  268 SFREMIALCLVKDPSKRPTASKLLKHAFFKK  298 (516)
T ss_pred             HHHHHHHHHhhcCcccCCCHHHHhccHHHhh
Confidence            5889999999999999999999977666654

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=5.2e-21  Score=120.25  Aligned_cols=100  Identities=15%  Similarity=0.166  Sum_probs=87.2

Q ss_pred             cccccccceecccccc-----cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcC-CCCCcCCCCCCCchHHHH
Q 041728            2 TDILLEFMNFFEGLAY-----TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP-IPLDEMLDPRLPPDPLFD   75 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~-----~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   75 (108)
                      .+|+|||+|||||++.     ..+|+.++||||+|+.+.+|..+.+|....+++..+..+. ...+.+++|+.+...+.+
T Consensus       188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~D  267 (1187)
T KOG0579|consen  188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSD  267 (1187)
T ss_pred             ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHH
Confidence            3689999999999775     5679999999999999999999999999999998877543 445677788888888999


Q ss_pred             HHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      |+..|+.+||..||++.+++++.++.
T Consensus       268 fLk~cL~Knp~~Rp~aaqll~Hpfv~  293 (1187)
T KOG0579|consen  268 FLKRCLVKNPRNRPPAAQLLKHPFVQ  293 (1187)
T ss_pred             HHHHHHhcCCccCCCHHHHhhCcccc
Confidence            99999999999999999997777664

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.83  E-value=3.9e-21  Score=118.32  Aligned_cols=99  Identities=24%  Similarity=0.303  Sum_probs=77.4

Q ss_pred             ccccccceecccccccC-----------CCcccccchhhhHHHHHHHhCCCCCCcchhH-HhhhhcCCCCCcCCCCCCCc
Q 041728            3 DILLEFMNFFEGLAYTI-----------KITEKYDVYSFGVLVLEVIKGKHPRDQMFFL-QFQLHLPIPLDEMLDPRLPP   70 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~-----------~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   70 (108)
                      +.+||+.||+||.+...           +.+.++||||+||++|+|..|+.||...... .....+.....++..|.+++
T Consensus       520 sQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~  599 (677)
T KOG0596|consen  520 SQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPE  599 (677)
T ss_pred             cccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCC
Confidence            46899999999987632           2567899999999999999999999876533 33334555555666677775


Q ss_pred             hH-HHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           71 DP-LFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        71 ~~-~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .. +.++|+.|+..||.+||++.+|+.+.++.
T Consensus       600 ~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~  631 (677)
T KOG0596|consen  600 NDELIDVMKCCLARDPKKRWSIPELLQHPFLQ  631 (677)
T ss_pred             chHHHHHHHHHHhcCcccCCCcHHHhcCcccc
Confidence            43 99999999999999999999997665543

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.83  E-value=1.2e-20  Score=103.93  Aligned_cols=96  Identities=17%  Similarity=0.085  Sum_probs=67.6

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHh-hhhcCCCCCcC------CCCCCCc-hHHHHH
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQF-QLHLPIPLDEM------LDPRLPP-DPLFDV   76 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~-~~~~~l   76 (108)
                      .|++.|||||.+....++.++||||+|+++|++++|..||........ ...........      ....... ..+.++
T Consensus        65 ~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (176)
T smart00750       65 RVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADF  144 (176)
T ss_pred             CCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHH
Confidence            588999999999988899999999999999999999999865432211 11110000111      0011111 158999


Q ss_pred             HhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           77 AFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      +..||..+|.+||++.++..+..+
T Consensus       145 i~~cl~~~p~~Rp~~~~ll~~~~~  168 (176)
T smart00750      145 MRVCASRLPQRREAANHYLAHCRA  168 (176)
T ss_pred             HHHHHhcccccccCHHHHHHHHHH
Confidence            999999999999999999544443

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.83  E-value=3.1e-21  Score=113.55  Aligned_cols=99  Identities=17%  Similarity=0.145  Sum_probs=74.1

Q ss_pred             ccccccceecccccccCCCc-ccccchhhhHHHHHHHhCCCCCCc-chhHHhhhhcCCCC-CcCCCCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKIT-EKYDVYSFGVLVLEVIKGKHPRDQ-MFFLQFQLHLPIPL-DEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~-~~~di~s~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~   79 (108)
                      .+.||+.|||||++..+... ..+||||+||++.||++|+.||.. .........+.... .+.....+ +.+..+|+.+
T Consensus       180 ~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~l-s~~a~~Fl~~  258 (313)
T KOG0198|consen  180 SVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSL-SDEAKDFLRK  258 (313)
T ss_pred             cccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCccc-CHHHHHHHHH
Confidence            47899999999999864333 489999999999999999999987 33333333322222 22223333 3789999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      |+..+|..||++++++.+.++..
T Consensus       259 C~~~~p~~Rpta~eLL~hpf~~~  281 (313)
T KOG0198|consen  259 CFKRDPEKRPTAEELLEHPFLKQ  281 (313)
T ss_pred             HhhcCcccCcCHHHHhhChhhhc
Confidence            99999999999999976666644

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.82  E-value=4.4e-20  Score=117.60  Aligned_cols=93  Identities=25%  Similarity=0.361  Sum_probs=74.9

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcch-hHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMF-FLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      -+..|||||.+....|+.++|+||||+++||+++ |..||.+.. .......+.. ..+...|..+..+++++|..||..
T Consensus       483 LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~-G~r~~~P~~c~~eiY~iM~~CW~~  561 (609)
T KOG0200|consen  483 LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKE-GNRMEQPEHCSDEIYDLMKSCWNA  561 (609)
T ss_pred             cceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHhCC
Confidence            3567999999999999999999999999999998 999999854 2222223333 345556666678999999999999


Q ss_pred             CCCCCCCHhhH-HHHHH
Q 041728           84 NPESRLIITLT-DGLKR   99 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~   99 (108)
                      +|++||+|.++ ..+..
T Consensus       562 ~p~~RP~F~~~~~~~~~  578 (609)
T KOG0200|consen  562 DPEDRPTFSECVEFFEK  578 (609)
T ss_pred             CcccCCCHHHHHHHHHH
Confidence            99999999998 55555

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.82  E-value=3.2e-21  Score=122.50  Aligned_cols=97  Identities=19%  Similarity=0.222  Sum_probs=84.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      .+-++.|.|||.+.+++|+.++|+||+|+++||+++ |..||..+...+.+..++.+ .++..|..++..++.||..||+
T Consensus       794 GKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~g-yRLPpPmDCP~aL~qLMldCWq  872 (996)
T KOG0196|consen  794 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQG-YRLPPPMDCPAALYQLMLDCWQ  872 (996)
T ss_pred             CccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhc-cCCCCCCCCcHHHHHHHHHHHH
Confidence            345689999999999999999999999999999886 99999999887777766665 5666676677889999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      +|-..||.|++| ..|+++.
T Consensus       873 kdR~~RP~F~qiV~~lDklI  892 (996)
T KOG0196|consen  873 KDRNRRPKFAQIVSTLDKLI  892 (996)
T ss_pred             HHhhcCCCHHHHHHHHHHHh
Confidence            999999999999 6677654

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.81  E-value=3.8e-21  Score=111.94  Aligned_cols=101  Identities=17%  Similarity=0.221  Sum_probs=87.7

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCC-CcCCCCCCCchHHHHHHhhh
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPL-DEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~c   80 (108)
                      +++.|||.|||||++..-.|+.++||||+|+...++..|++||...++++.+..++... +....|..+.+++.+|++.|
T Consensus       187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~C  266 (502)
T KOG0574|consen  187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSC  266 (502)
T ss_pred             CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHH
Confidence            46889999999999999999999999999999999999999999999999888665543 33345666678899999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      +.++|++|.++.++.++.++.+
T Consensus       267 LiK~PE~R~TA~~L~~H~Fikn  288 (502)
T KOG0574|consen  267 LIKKPEERKTALRLCEHTFIKN  288 (502)
T ss_pred             hcCCHHHHHHHHHHhhhhhhcC
Confidence            9999999999999987777654

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.80  E-value=1.2e-19  Score=106.27  Aligned_cols=93  Identities=19%  Similarity=0.201  Sum_probs=70.8

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+++.|+|||.+....++.++|+||+|+++|++++ |..||.+....+....+............ +..+.+++..||..
T Consensus       187 ~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~l~~~c~~~  265 (283)
T cd05048         187 LLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDC-PARVYALMIECWNE  265 (283)
T ss_pred             cccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCcccC-CHHHHHHHHHHccC
Confidence            45678999999888888999999999999999997 99998876554443333222222222233 37899999999999


Q ss_pred             CCCCCCCHhhH-HHHH
Q 041728           84 NPESRLIITLT-DGLK   98 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~   98 (108)
                      +|.+||++++| ..|+
T Consensus       266 ~p~~Rp~~~~i~~~l~  281 (283)
T cd05048         266 IPARRPRFKDIHTRLR  281 (283)
T ss_pred             ChhhCcCHHHHHHHHh
Confidence            99999999999 5443

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.80  E-value=2.5e-19  Score=107.34  Aligned_cols=96  Identities=22%  Similarity=0.323  Sum_probs=69.5

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhh-hcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQL-HLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      .+++.|+|||.+....++.++||||+|+++|++++ |..||.......... ...... ....+...+..+.+++..||.
T Consensus       237 ~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~  315 (338)
T cd05102         237 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGT-RMRAPENATPEIYRIMLACWQ  315 (338)
T ss_pred             CCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcc
Confidence            35678999999988888999999999999999997 999987643222111 111111 111223334679999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      .+|.+||++.++ ..|+.+.
T Consensus       316 ~dp~~RPs~~el~~~l~~~~  335 (338)
T cd05102         316 GDPKERPTFSALVEILGDLL  335 (338)
T ss_pred             CChhhCcCHHHHHHHHHHHH
Confidence            999999999999 5555543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.80  E-value=3.5e-19  Score=112.01  Aligned_cols=94  Identities=20%  Similarity=0.232  Sum_probs=80.9

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      =++.|.|||.+.++.|+.++|+|+||+++||+.+ |-.||.+....+.+..++.+ .++-.|.-++...+.||..||+.+
T Consensus       428 FPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg-yRM~~PeGCPpkVYeLMraCW~Ws  506 (1157)
T KOG4278|consen  428 FPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG-YRMDGPEGCPPKVYELMRACWNWS  506 (1157)
T ss_pred             CcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc-ccccCCCCCCHHHHHHHHHHhcCC
Confidence            3678999999999999999999999999999998 88899999887777766555 566667667788999999999999


Q ss_pred             CCCCCCHhhH-HHHHHH
Q 041728           85 PESRLIITLT-DGLKRL  100 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l  100 (108)
                      |.+||+|.++ ..++.+
T Consensus       507 PsDRPsFaeiHqafEtm  523 (1157)
T KOG4278|consen  507 PSDRPSFAEIHQAFETM  523 (1157)
T ss_pred             cccCccHHHHHHHHHHH
Confidence            9999999999 555544

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=2.2e-19  Score=112.57  Aligned_cols=98  Identities=17%  Similarity=0.095  Sum_probs=85.1

Q ss_pred             ccccccceecccccccCCCc-ccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKIT-EKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~-~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      +.||+|.|.|||.+.+.+|. .++||||.|+++|.+++|+.||+..+....+..+..+..++.  ...+.++++|+.+++
T Consensus       170 TSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP--s~Is~eaQdLLr~ml  247 (786)
T KOG0588|consen  170 TSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP--SNISSEAQDLLRRML  247 (786)
T ss_pred             ccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC--CcCCHHHHHHHHHHh
Confidence            57899999999999999987 689999999999999999999999988887777777766664  333478999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ..||+.|-+++||.++.++..
T Consensus       248 ~VDp~~RiT~~eI~kHP~l~g  268 (786)
T KOG0588|consen  248 DVDPSTRITTEEILKHPFLSG  268 (786)
T ss_pred             ccCccccccHHHHhhCchhhc
Confidence            999999999999987777643

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.79  E-value=4.6e-19  Score=110.88  Aligned_cols=95  Identities=16%  Similarity=0.146  Sum_probs=73.9

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||.+...................+.++ ..+.+++..||.
T Consensus       204 ~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~L~  282 (496)
T PTZ00283        204 TFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSIS-PEMQEIVTALLS  282 (496)
T ss_pred             cccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCC-HHHHHHHHHHcc
Confidence            3568999999999988889999999999999999999999998765444333222222223333334 779999999999


Q ss_pred             CCCCCCCCHhhHHHHH
Q 041728           83 GNPESRLIITLTDGLK   98 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~   98 (108)
                      .+|.+||++.+++.+.
T Consensus       283 ~dP~~RPs~~ell~~p  298 (496)
T PTZ00283        283 SDPKRRPSSSKLLNMP  298 (496)
T ss_pred             cChhhCcCHHHHHhCH
Confidence            9999999999985443

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.79  E-value=1.4e-19  Score=106.56  Aligned_cols=87  Identities=17%  Similarity=0.129  Sum_probs=73.2

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      .++|||+-|||||.+....|+..+|+||+|+++|+|++|.+||.+.+.......+..... ...+...+.+..+++.+++
T Consensus       183 ~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~-~~~p~~ls~~ardll~~LL  261 (357)
T KOG0598|consen  183 RTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKL-PLPPGYLSEEARDLLKKLL  261 (357)
T ss_pred             ccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcC-CCCCccCCHHHHHHHHHHh
Confidence            468999999999999999999999999999999999999999999887777665544432 2334434478999999999


Q ss_pred             CCCCCCCC
Q 041728           82 NGNPESRL   89 (108)
Q Consensus        82 ~~~p~~Rp   89 (108)
                      ..+|++|.
T Consensus       262 ~rdp~~RL  269 (357)
T KOG0598|consen  262 KRDPRQRL  269 (357)
T ss_pred             ccCHHHhc
Confidence            99999996

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.78  E-value=2.9e-19  Score=111.94  Aligned_cols=89  Identities=20%  Similarity=0.144  Sum_probs=74.9

Q ss_pred             CcccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            1 MTDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         1 ~~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ++++||||-|||||.+....|+..+|+|++|+++|+|+.|+.||.+.+--.....+..  .+...|...+.+..++|.++
T Consensus       525 TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~--d~~~yP~~ls~ea~~il~~l  602 (694)
T KOG0694|consen  525 TSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVN--DEVRYPRFLSKEAIAIMRRL  602 (694)
T ss_pred             cccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhc--CCCCCCCcccHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999999997754333332222  45566777778999999999


Q ss_pred             cCCCCCCCCCH
Q 041728           81 LNGNPESRLII   91 (108)
Q Consensus        81 ~~~~p~~Rp~~   91 (108)
                      +.++|++|..+
T Consensus       603 l~k~p~kRLG~  613 (694)
T KOG0694|consen  603 LRKNPEKRLGS  613 (694)
T ss_pred             hccCcccccCC
Confidence            99999999866

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.78  E-value=2.8e-19  Score=106.93  Aligned_cols=99  Identities=11%  Similarity=0.028  Sum_probs=80.3

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      .+++||--|+|||++.+.....++|+|+||+++|||+.|..||.+.+...+...+................+.+|+++++
T Consensus       293 nSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LL  372 (459)
T KOG0610|consen  293 NSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLL  372 (459)
T ss_pred             cccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHh
Confidence            57999999999999999999999999999999999999999999998777766544443333322222266999999999


Q ss_pred             CCCCCCCCC----HhhHHHHHHH
Q 041728           82 NGNPESRLI----ITLTDGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~----~~~l~~l~~l  100 (108)
                      .+||.+|..    ++||.++.+.
T Consensus       373 vKdP~kRlg~~rGA~eIK~HpFF  395 (459)
T KOG0610|consen  373 VKDPSKRLGSKRGAAEIKRHPFF  395 (459)
T ss_pred             ccChhhhhccccchHHhhcCccc
Confidence            999999987    7777655544

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.78  E-value=1.4e-18  Score=102.25  Aligned_cols=97  Identities=26%  Similarity=0.349  Sum_probs=72.8

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .++..|++||.+....++.++|+||+|+++|++++ |..||.................... +...+..+.+++.+||+.
T Consensus       186 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~  264 (291)
T cd05094         186 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLER-PRVCPKEVYDIMLGCWQR  264 (291)
T ss_pred             CcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCCCC-CccCCHHHHHHHHHHccc
Confidence            35678999999988888899999999999999998 9999876554333332222211112 222336799999999999


Q ss_pred             CCCCCCCHhhH-HHHHHHHH
Q 041728           84 NPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      +|.+||++++| ..+..+..
T Consensus       265 ~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         265 EPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             ChhhCcCHHHHHHHHHHHHh
Confidence            99999999999 77777654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.78  E-value=1.5e-18  Score=101.95  Aligned_cols=96  Identities=26%  Similarity=0.313  Sum_probs=71.7

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|+|||.+....++.++|+||+|++++++++ |..|+.................... +...+..+.+++.+||+.+
T Consensus       184 ~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~~~l~~~  262 (288)
T cd05093         184 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQR-PRTCPKEVYDLMLGCWQRE  262 (288)
T ss_pred             ccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHHHHccCC
Confidence            4667999999988888899999999999999998 8888876554333322222211112 2223367999999999999


Q ss_pred             CCCCCCHhhH-HHHHHHHH
Q 041728           85 PESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l~~  102 (108)
                      |.+||+++++ ..++.+..
T Consensus       263 p~~Rpt~~~v~~~l~~~~~  281 (288)
T cd05093         263 PHMRLNIKEIHSLLQNLAK  281 (288)
T ss_pred             hhhCCCHHHHHHHHHHHHH
Confidence            9999999999 66666654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.78  E-value=1.2e-18  Score=100.92  Aligned_cols=91  Identities=21%  Similarity=0.214  Sum_probs=68.8

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      +++.|++||.+....++.++|+||+|+++|++++ |..||....................... .+.++.+++..||+.+
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~-~~~~l~~li~~~~~~~  238 (257)
T cd05116         160 WPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQR-CPPEMYDLMKLCWTYG  238 (257)
T ss_pred             CCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCC-CCHHHHHHHHHHhccC
Confidence            3468999999887788889999999999999997 9999986654444333333222222222 3377999999999999


Q ss_pred             CCCCCCHhhH-HHH
Q 041728           85 PESRLIITLT-DGL   97 (108)
Q Consensus        85 p~~Rp~~~~l-~~l   97 (108)
                      |.+||++++| ..|
T Consensus       239 p~~Rp~~~~i~~~l  252 (257)
T cd05116         239 VDERPGFAVVELRL  252 (257)
T ss_pred             chhCcCHHHHHHHH
Confidence            9999999998 444

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.77  E-value=1.6e-18  Score=101.28  Aligned_cols=88  Identities=22%  Similarity=0.275  Sum_probs=67.7

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      +++.|+|||.+....++.++|+||+|+++|++++ |..||....................... .+..+.+++.+||..+
T Consensus       186 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~  264 (280)
T cd05049         186 LPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRPRT-CPSEVYDIMLGCWKRD  264 (280)
T ss_pred             ccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCCCCC-CCHHHHHHHHHHcCCC
Confidence            4567999999988888999999999999999998 9999876554433333222222222222 3477999999999999


Q ss_pred             CCCCCCHhhH
Q 041728           85 PESRLIITLT   94 (108)
Q Consensus        85 p~~Rp~~~~l   94 (108)
                      |.+||++.++
T Consensus       265 p~~Rp~~~ei  274 (280)
T cd05049         265 PQQRINIKDI  274 (280)
T ss_pred             cccCCCHHHH
Confidence            9999999999

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.77  E-value=8.5e-19  Score=106.30  Aligned_cols=99  Identities=19%  Similarity=0.128  Sum_probs=79.5

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ++.+||+.||+||.+.+..|+.++|||++||.+|++++-+.+|.+.+.......+.......+.. ....++..++..|+
T Consensus       164 ~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~-~ys~el~~lv~~~l  242 (426)
T KOG0589|consen  164 STVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPS-MYSSELRSLVKSML  242 (426)
T ss_pred             heecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCc-cccHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999999999887666655544443333322 23377999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ..+|+.||++.+++....+.
T Consensus       243 ~~~P~~RPsa~~LL~~P~l~  262 (426)
T KOG0589|consen  243 RKNPEHRPSALELLRRPHLL  262 (426)
T ss_pred             hcCCccCCCHHHHhhChhhh
Confidence            99999999999994434443

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.77  E-value=1.5e-18  Score=105.47  Aligned_cols=95  Identities=20%  Similarity=0.314  Sum_probs=69.2

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      +++.|+|||.+....++.++|+||+|+++|++++ |..||.....................+...+.++.+++..||+.+
T Consensus       276 ~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  355 (374)
T cd05106         276 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLE  355 (374)
T ss_pred             CccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCC
Confidence            4567999999888889999999999999999997 999987654322211111111122223333477999999999999


Q ss_pred             CCCCCCHhhH-HHHHHH
Q 041728           85 PESRLIITLT-DGLKRL  100 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l  100 (108)
                      |.+||++.+| ..++.+
T Consensus       356 p~~RPs~~~l~~~l~~~  372 (374)
T cd05106         356 PTERPTFSQISQLIQRQ  372 (374)
T ss_pred             hhhCcCHHHHHHHHHHH
Confidence            9999999999 555543

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.77  E-value=6.4e-19  Score=100.03  Aligned_cols=100  Identities=10%  Similarity=0.023  Sum_probs=83.5

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCC--chHHHHHHhhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLP--PDPLFDVAFSC   80 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~c   80 (108)
                      .++|||.||+||++...+|+..+|||+.|+++|-++.|.+||.+....+.+..+..+..+...|..+  .++..+++.++
T Consensus       171 G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrM  250 (355)
T KOG0033|consen  171 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRM  250 (355)
T ss_pred             cccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999876666666665555555554433  26799999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      +..||.+|-++.|.+.+++|.+
T Consensus       251 L~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  251 LTVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             hccChhhhccHHHHhCCchhcc
Confidence            9999999999999877777644

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.77  E-value=6.1e-19  Score=109.48  Aligned_cols=100  Identities=17%  Similarity=0.101  Sum_probs=79.6

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      +++.|||.|||||.+.+..|+..+|+||+||++||+..|++||......+....+.....  ..|......+.+|+++++
T Consensus       158 tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v--~~p~~~S~~f~nfl~gLL  235 (808)
T KOG0597|consen  158 TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPV--KPPSTASSSFVNFLQGLL  235 (808)
T ss_pred             eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCC--CCcccccHHHHHHHHHHh
Confidence            467899999999999999999999999999999999999999987765554443332211  122233367999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRLASF  103 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l~~~  103 (108)
                      .+||..|.+-.++..+.+....
T Consensus       236 ~kdP~~RltW~~Ll~HpF~k~~  257 (808)
T KOG0597|consen  236 IKDPAQRLTWTDLLGHPFWKGK  257 (808)
T ss_pred             hcChhhcccHHHHhcChHHhhh
Confidence            9999999999998777766543

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.77  E-value=1.7e-18  Score=108.01  Aligned_cols=94  Identities=13%  Similarity=0.034  Sum_probs=71.5

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+||+.|+|||.+....++.++|+||+|+++|++++|..||.......................+ +..+.+++..||.
T Consensus       230 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~li~~~L~  308 (478)
T PTZ00267        230 SFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPV-SSGMKALLDPLLS  308 (478)
T ss_pred             ccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccC-CHHHHHHHHHHhc
Confidence            356899999999998888999999999999999999999999866544333322222122222223 3679999999999


Q ss_pred             CCCCCCCCHhhHHHH
Q 041728           83 GNPESRLIITLTDGL   97 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l   97 (108)
                      .+|+.||++.+++..
T Consensus       309 ~dP~~Rps~~~~l~~  323 (478)
T PTZ00267        309 KNPALRPTTQQLLHT  323 (478)
T ss_pred             cChhhCcCHHHHHhC
Confidence            999999999998443

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.77  E-value=2e-18  Score=100.52  Aligned_cols=92  Identities=18%  Similarity=0.193  Sum_probs=68.8

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|+|||.+....++.++|+||+|+++|++++ |..||.................. ..+...+..+.+++..||+.+
T Consensus       170 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~c~~~~  248 (266)
T cd05064         170 SPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRL-PAPRNCPNLLHQLMLDCWQKE  248 (266)
T ss_pred             CceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC-CCCCCCCHHHHHHHHHHcCCC
Confidence            4568999999888889999999999999999875 99999866544333322222111 223333477999999999999


Q ss_pred             CCCCCCHhhH-HHHH
Q 041728           85 PESRLIITLT-DGLK   98 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~   98 (108)
                      |.+||++++| ..+.
T Consensus       249 p~~RP~~~~i~~~l~  263 (266)
T cd05064         249 RGERPRFSQIHSILS  263 (266)
T ss_pred             chhCCCHHHHHHHHH
Confidence            9999999999 4443

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.77  E-value=2.2e-18  Score=100.94  Aligned_cols=89  Identities=18%  Similarity=0.144  Sum_probs=68.1

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+++.|+|||.+....++.++|+||+|++++++++ |..|+.+.........+........... .+..+.+++..||+.
T Consensus       187 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~li~~cl~~  265 (283)
T cd05091         187 LLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDD-CPAWVYTLMLECWNE  265 (283)
T ss_pred             cCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCC-CCHHHHHHHHHHhCC
Confidence            34678999999888888899999999999999997 8888876654444443333222222223 337799999999999


Q ss_pred             CCCCCCCHhhH
Q 041728           84 NPESRLIITLT   94 (108)
Q Consensus        84 ~p~~Rp~~~~l   94 (108)
                      +|.+||++++|
T Consensus       266 ~p~~RP~~~~i  276 (283)
T cd05091         266 FPSRRPRFKDI  276 (283)
T ss_pred             CcccCCCHHHH
Confidence            99999999999

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PTZ00284 protein kinase; Provisional

Probab=99.76  E-value=3.7e-19  Score=110.67  Aligned_cols=101  Identities=17%  Similarity=0.126  Sum_probs=72.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---hcCCC--------------------
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---HLPIP--------------------   59 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--------------------   59 (108)
                      ..+||+.|+|||.+.+..++.++||||+||++|++++|+.||.+........   .....                    
T Consensus       304 ~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~  383 (467)
T PTZ00284        304 AIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNS  383 (467)
T ss_pred             cccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhh
Confidence            4578999999999998889999999999999999999999997654321111   00000                    


Q ss_pred             ---CCcCCC--------------CCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHHH
Q 041728           60 ---LDEMLD--------------PRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLASF  103 (108)
Q Consensus        60 ---~~~~~~--------------~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~~  103 (108)
                         ......              .......+.+|+.+||+.||.+||+++|++.+.++...
T Consensus       384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~  444 (467)
T PTZ00284        384 AGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY  444 (467)
T ss_pred             cccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence               000000              00112346799999999999999999999877777653

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.76  E-value=2.7e-18  Score=102.76  Aligned_cols=100  Identities=12%  Similarity=0.083  Sum_probs=70.9

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcC-------------------------
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP-------------------------   57 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------   57 (108)
                      ...|++.|+|||.+.+..++.++|+||+|+++|++++|..||.............                         
T Consensus       161 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (331)
T cd06649         161 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPV  240 (331)
T ss_pred             cCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccc
Confidence            3568899999999988888999999999999999999999986433211110000                         


Q ss_pred             ---------------------CCCCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           58 ---------------------IPLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        58 ---------------------~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                                           ............+..+.+++.+||+.||++||++++++.+.++..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~  306 (331)
T cd06649         241 SGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKR  306 (331)
T ss_pred             cccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhh
Confidence                                 000000001112256899999999999999999999977776654

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.76  E-value=8.7e-20  Score=109.09  Aligned_cols=100  Identities=12%  Similarity=0.083  Sum_probs=76.0

Q ss_pred             cccccccceecccccccCCC---cccccchhhhHHHHHHHhCCCCCCcchhHH-hhhhcCCCCCcCC---CCCCCchHHH
Q 041728            2 TDILLEFMNFFEGLAYTIKI---TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ-FQLHLPIPLDEML---DPRLPPDPLF   74 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~---~~~~di~s~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~   74 (108)
                      .++||||.|.|||++....+   ..++|+||+||++|-.++|.+||.+..... ...++..+....-   ..++. ++..
T Consensus       336 ~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Is-eea~  414 (475)
T KOG0615|consen  336 KTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRIS-EEAL  414 (475)
T ss_pred             hhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhh-HHHH
Confidence            46899999999999986443   357899999999999999999998665333 3333333322222   22333 7799


Q ss_pred             HHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           75 DVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        75 ~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      +++..++..||++||+++|++.+.++..
T Consensus       415 dlI~~mL~VdP~~R~s~~eaL~hpW~~~  442 (475)
T KOG0615|consen  415 DLINWMLVVDPENRPSADEALNHPWFKD  442 (475)
T ss_pred             HHHHHhhEeCcccCcCHHHHhcChhhhc
Confidence            9999999999999999999988888763

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.76  E-value=7.3e-18  Score=98.75  Aligned_cols=96  Identities=19%  Similarity=0.204  Sum_probs=71.7

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .++..|++||.+....++.++|+||+|+++|++++ |..|+.+............. .....+...+..+.+++..||..
T Consensus       172 ~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~c~~~  250 (279)
T cd05111         172 KTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKG-ERLAQPQICTIDVYMVMVKCWMI  250 (279)
T ss_pred             CCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-CcCCCCCCCCHHHHHHHHHHcCC
Confidence            45678999999988889999999999999999998 99898766543322222221 22223334446788999999999


Q ss_pred             CCCCCCCHhhH-HHHHHHH
Q 041728           84 NPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l~  101 (108)
                      +|+.||++.++ ..+..+.
T Consensus       251 ~p~~Rps~~el~~~l~~~~  269 (279)
T cd05111         251 DENVRPTFKELANEFTRMA  269 (279)
T ss_pred             CcccCcCHHHHHHHHHHHH
Confidence            99999999999 5555543

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.76  E-value=1.5e-18  Score=100.16  Aligned_cols=93  Identities=20%  Similarity=0.134  Sum_probs=70.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|++||......++.++|+|++|++++++++|..||........................ +..+.+++.+||+.
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~l~~  239 (256)
T cd08529         161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMY-SQQLAQLIDQCLTK  239 (256)
T ss_pred             cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccc-CHHHHHHHHHHccC
Confidence            35778899999998888889999999999999999999999766543333322222222222222 36799999999999


Q ss_pred             CCCCCCCHhhHHHH
Q 041728           84 NPESRLIITLTDGL   97 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l   97 (108)
                      +|++||++.++.+.
T Consensus       240 ~p~~Rp~~~~ll~~  253 (256)
T cd08529         240 DYRQRPDTFQLLRN  253 (256)
T ss_pred             CcccCcCHHHHhhC
Confidence            99999999998544

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.76  E-value=4e-18  Score=103.58  Aligned_cols=92  Identities=22%  Similarity=0.329  Sum_probs=67.7

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhh-hcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQL-HLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ++..|+|||.+....++.++|+||+|+++|++++ |..||.......... ..... .....+...+.++.+++..||..
T Consensus       278 ~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~  356 (375)
T cd05104         278 LPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEG-YRMLSPECAPSEMYDIMKSCWDA  356 (375)
T ss_pred             CCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhC-ccCCCCCCCCHHHHHHHHHHccC
Confidence            4567999999988889999999999999999997 888887543222111 11111 12222334457899999999999


Q ss_pred             CCCCCCCHhhH-HHHH
Q 041728           84 NPESRLIITLT-DGLK   98 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~   98 (108)
                      +|++||++++| ..++
T Consensus       357 dP~~RPs~~eil~~l~  372 (375)
T cd05104         357 DPLKRPTFKQIVQLIE  372 (375)
T ss_pred             ChhHCcCHHHHHHHHH
Confidence            99999999999 5444

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.76  E-value=1.6e-18  Score=100.95  Aligned_cols=95  Identities=16%  Similarity=0.117  Sum_probs=68.2

Q ss_pred             cccccceecccccc-----cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHh
Q 041728            4 ILLEFMNFFEGLAY-----TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAF   78 (108)
Q Consensus         4 ~~~~~~~~ape~~~-----~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   78 (108)
                      ..|+..|++||.+.     ...++.++|+||+|+++|++++|..|+.....................+...+..+.+++.
T Consensus       171 ~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  250 (272)
T cd06637         171 FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIE  250 (272)
T ss_pred             ccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHH
Confidence            46788999999875     2357788999999999999999999987554333322222111111222223367999999


Q ss_pred             hhcCCCCCCCCCHhhHHHHH
Q 041728           79 SCLNGNPESRLIITLTDGLK   98 (108)
Q Consensus        79 ~c~~~~p~~Rp~~~~l~~l~   98 (108)
                      .||..+|.+||++.+++.+.
T Consensus       251 ~~l~~~p~~Rpt~~~il~~~  270 (272)
T cd06637         251 SCLVKNHSQRPTTEQLMKHP  270 (272)
T ss_pred             HHcCCChhhCCCHHHHhhCC
Confidence            99999999999999985443

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.76  E-value=5.5e-19  Score=108.58  Aligned_cols=99  Identities=25%  Similarity=0.276  Sum_probs=82.1

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .-++.|+|||.+....|+.++|||+||+++||+.+ |..||.+....+....+.....+...+...+..+..++..||..
T Consensus       323 klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~  402 (474)
T KOG0194|consen  323 KLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKK  402 (474)
T ss_pred             cCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccC
Confidence            35789999999999999999999999999999987 88899999877776666343344444555668899999999999


Q ss_pred             CCCCCCCHhhH-HHHHHHHHH
Q 041728           84 NPESRLIITLT-DGLKRLASF  103 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l~~~  103 (108)
                      +|+.||+|.++ ..++.+...
T Consensus       403 ~p~~R~tm~~i~~~l~~~~~~  423 (474)
T KOG0194|consen  403 DPEDRPTMSTIKKKLEALEKK  423 (474)
T ss_pred             ChhhccCHHHHHHHHHHHHhc
Confidence            99999999999 777766543

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.76  E-value=5.1e-18  Score=101.87  Aligned_cols=96  Identities=23%  Similarity=0.328  Sum_probs=68.7

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhh-hcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQL-HLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      .++..|+|||++.+..++.++|+||+|++++++++ |..||.+........ ..... .....+......+.+++..||+
T Consensus       236 ~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~  314 (337)
T cd05054         236 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEG-TRMRAPEYATPEIYSIMLDCWH  314 (337)
T ss_pred             CCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhcc-CCCCCCccCCHHHHHHHHHHcc
Confidence            34668999999988889999999999999999997 988986533211111 11111 1111222333679999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      .+|++||++.+| ..|..+.
T Consensus       315 ~~p~~RPs~~ell~~l~~~~  334 (337)
T cd05054         315 NNPEDRPTFSELVEILGDLL  334 (337)
T ss_pred             CChhhCcCHHHHHHHHHHHH
Confidence            999999999999 5555543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.75  E-value=5.8e-19  Score=102.49  Aligned_cols=89  Identities=24%  Similarity=0.325  Sum_probs=66.0

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .++..|++||.+....++.++||||||+++|++++ +..|+............... .....+...+..+.+++..||..
T Consensus       166 ~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~C~~~  244 (259)
T PF07714_consen  166 QLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQG-QRLPIPDNCPKDIYSLIQQCWSH  244 (259)
T ss_dssp             ESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTT-EETTSBTTSBHHHHHHHHHHT-S
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccceeccchhHHHHHHHHHHcCC
Confidence            46678999999988889999999999999999999 78888876555444433222 22223333447799999999999


Q ss_pred             CCCCCCCHhhH
Q 041728           84 NPESRLIITLT   94 (108)
Q Consensus        84 ~p~~Rp~~~~l   94 (108)
                      +|.+||++.++
T Consensus       245 ~p~~RPs~~~i  255 (259)
T PF07714_consen  245 DPEKRPSFQEI  255 (259)
T ss_dssp             SGGGS--HHHH
T ss_pred             ChhhCcCHHHH
Confidence            99999999998

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.75  E-value=5.4e-18  Score=98.46  Aligned_cols=92  Identities=22%  Similarity=0.246  Sum_probs=68.1

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCCC
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNP   85 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p   85 (108)
                      +..|++||.+....++.++|+|++|++++++++ |..|+.+............... ...+...+..+.+++.+||..+|
T Consensus       168 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p  246 (263)
T cd05052         168 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYR-MERPEGCPPKVYELMRACWQWNP  246 (263)
T ss_pred             ccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHccCCc
Confidence            457999999888888889999999999999998 8888876543333222222211 11222233779999999999999


Q ss_pred             CCCCCHhhH-HHHHH
Q 041728           86 ESRLIITLT-DGLKR   99 (108)
Q Consensus        86 ~~Rp~~~~l-~~l~~   99 (108)
                      ++||++.++ ..++.
T Consensus       247 ~~Rp~~~~l~~~l~~  261 (263)
T cd05052         247 SDRPSFAEIHQAFET  261 (263)
T ss_pred             ccCCCHHHHHHHHHh
Confidence            999999999 55543

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.75  E-value=4.3e-18  Score=99.75  Aligned_cols=91  Identities=23%  Similarity=0.358  Sum_probs=67.8

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      +++.|++||.+....++.++|+||+|+++|++++ |..||................. ...+...+..+.+++.+||..+
T Consensus       186 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~  264 (280)
T cd05092         186 LPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRE-LERPRTCPPEVYAIMQGCWQRE  264 (280)
T ss_pred             ccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCcc-CCCCCCCCHHHHHHHHHHccCC
Confidence            4567999999988888999999999999999998 8888866544333332222211 1122223377999999999999


Q ss_pred             CCCCCCHhhH-HHH
Q 041728           85 PESRLIITLT-DGL   97 (108)
Q Consensus        85 p~~Rp~~~~l-~~l   97 (108)
                      |.+||++++| ..+
T Consensus       265 P~~Rp~~~~l~~~l  278 (280)
T cd05092         265 PQQRMVIKDIHSRL  278 (280)
T ss_pred             hhhCCCHHHHHHHH
Confidence            9999999999 444

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=4.2e-18  Score=99.38  Aligned_cols=99  Identities=19%  Similarity=0.238  Sum_probs=74.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..++..|++||.+....++.++|+|++|+++|++++|..|+...+.....................+..+.+++.+||..
T Consensus       158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  237 (274)
T cd06609         158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNK  237 (274)
T ss_pred             ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhC
Confidence            45778899999998878889999999999999999999999766544443322222222222221236699999999999


Q ss_pred             CCCCCCCHhhHHHHHHHHH
Q 041728           84 NPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l~~l~~  102 (108)
                      +|++||+++++..+.++..
T Consensus       238 ~p~~Rpt~~~il~~~~~~~  256 (274)
T cd06609         238 DPKERPSAKELLKHKFIKK  256 (274)
T ss_pred             ChhhCcCHHHHhhChhhcC
Confidence            9999999999976666644

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.75  E-value=1.8e-18  Score=101.29  Aligned_cols=94  Identities=16%  Similarity=0.130  Sum_probs=67.4

Q ss_pred             cccccceecccccc-----cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHh
Q 041728            4 ILLEFMNFFEGLAY-----TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAF   78 (108)
Q Consensus         4 ~~~~~~~~ape~~~-----~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   78 (108)
                      ..|++.|+|||.+.     ...++.++|+|++|+++|++++|..||.........................+..+.+++.
T Consensus       181 ~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  260 (282)
T cd06636         181 FIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIE  260 (282)
T ss_pred             ccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHH
Confidence            45788899999875     2457778999999999999999999987654333322211111111112222367999999


Q ss_pred             hhcCCCCCCCCCHhhHHHH
Q 041728           79 SCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        79 ~c~~~~p~~Rp~~~~l~~l   97 (108)
                      +||..+|.+||++.+|+.+
T Consensus       261 ~cl~~~p~~Rp~~~ell~~  279 (282)
T cd06636         261 GCLVKNYLSRPSTEQLLKH  279 (282)
T ss_pred             HHhCCChhhCcCHHHHhcC
Confidence            9999999999999998544

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=4.9e-18  Score=102.80  Aligned_cols=99  Identities=12%  Similarity=0.056  Sum_probs=79.6

Q ss_pred             cccccccceecccccccCC-Cc-ccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCC-chHHHHHHh
Q 041728            2 TDILLEFMNFFEGLAYTIK-IT-EKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLP-PDPLFDVAF   78 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~-~~-~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~   78 (108)
                      .+++||+.|+|||++.+.. |+ .++|+||+|+++|.|+.|..||...+.......+....  ...|... ..++..++.
T Consensus       179 ~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~--~~~p~~~~S~~~~~Li~  256 (370)
T KOG0583|consen  179 KTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGE--FKIPSYLLSPEARSLIE  256 (370)
T ss_pred             cCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCC--ccCCCCcCCHHHHHHHH
Confidence            4689999999999999866 87 78999999999999999999999876555544433332  2223333 577999999


Q ss_pred             hhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           79 SCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        79 ~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      +|+..+|..|+++.+|..+.++..
T Consensus       257 ~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  257 KMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHcCCCcccCCCHHHHhhChhhcc
Confidence            999999999999999977777664

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.75  E-value=6.1e-18  Score=98.97  Aligned_cols=95  Identities=23%  Similarity=0.288  Sum_probs=71.8

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+....++.++|+||+|+++|++++ |..|+................ ....+...+..+.+++..||..+
T Consensus       181 ~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~  259 (280)
T cd05043         181 RPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY-RLAQPINCPDELFAVMACCWALD  259 (280)
T ss_pred             cchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC-CCCCCCcCCHHHHHHHHHHcCCC
Confidence            4567999999887788899999999999999998 999997665544433322221 11122223477999999999999


Q ss_pred             CCCCCCHhhH-HHHHHHH
Q 041728           85 PESRLIITLT-DGLKRLA  101 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l~  101 (108)
                      |++||++.++ ..|..+.
T Consensus       260 p~~Rps~~~~~~~l~~~~  277 (280)
T cd05043         260 PEERPSFSQLVQCLTDFH  277 (280)
T ss_pred             hhhCCCHHHHHHHHHHHH
Confidence            9999999999 6666554

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.75  E-value=1.5e-17  Score=98.45  Aligned_cols=101  Identities=21%  Similarity=0.275  Sum_probs=75.1

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      +++.|+|||.+....++.++|+||+|+++|++++ |..|+.+.............. ....+...+..+.+++.+||..+
T Consensus       201 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~  279 (304)
T cd05101         201 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYMMMRDCWHAI  279 (304)
T ss_pred             CCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcccC
Confidence            4567999999887888899999999999999998 777877654443333222221 11122223477999999999999


Q ss_pred             CCCCCCHhhH-HHHHHHHHHHhcc
Q 041728           85 PESRLIITLT-DGLKRLASFLLKK  107 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l~~~~~~~  107 (108)
                      |.+||++.++ ..|..+.....++
T Consensus       280 p~~Rps~~e~l~~l~~~~~~~~~~  303 (304)
T cd05101         280 PSHRPTFKQLVEDLDRILTLTTNE  303 (304)
T ss_pred             hhhCCCHHHHHHHHHHHHHhhhcC
Confidence            9999999999 7788887765553

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.75  E-value=5.6e-18  Score=98.24  Aligned_cols=91  Identities=14%  Similarity=0.174  Sum_probs=68.8

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCCC
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNP   85 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p   85 (108)
                      ++.|++||.+....++.++|+||+|+++|++++ |..||....................++. .+.++.+++..||..+|
T Consensus       161 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~c~~~~~  239 (257)
T cd05115         161 PLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAE-CPPEMYALMKDCWIYKW  239 (257)
T ss_pred             CcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCC-CCHHHHHHHHHHcCCCh
Confidence            467999999887788889999999999999996 9999987655444433332222222223 34779999999999999


Q ss_pred             CCCCCHhhH-HHHH
Q 041728           86 ESRLIITLT-DGLK   98 (108)
Q Consensus        86 ~~Rp~~~~l-~~l~   98 (108)
                      ++||++.+| ..+.
T Consensus       240 ~~Rp~~~~i~~~l~  253 (257)
T cd05115         240 EDRPNFAKVEERMR  253 (257)
T ss_pred             hhCcCHHHHHHHHh
Confidence            999999999 4343

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=3.6e-18  Score=99.01  Aligned_cols=94  Identities=13%  Similarity=0.005  Sum_probs=69.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|+..|+|||.+....++.++|+||+|+++|++++|+.||.+...................+...+..+.+++..||..
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  246 (263)
T cd06625         167 VTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVE  246 (263)
T ss_pred             CCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhc
Confidence            45678899999998888889999999999999999999998765443332221111111112222336799999999999


Q ss_pred             CCCCCCCHhhHHHH
Q 041728           84 NPESRLIITLTDGL   97 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l   97 (108)
                      +|.+||++.+++.+
T Consensus       247 ~p~~Rpt~~~ll~~  260 (263)
T cd06625         247 NAKKRPSAEELLRH  260 (263)
T ss_pred             CcccCCCHHHHhhC
Confidence            99999999998543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.75  E-value=8.8e-18  Score=97.40  Aligned_cols=95  Identities=29%  Similarity=0.449  Sum_probs=69.2

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .++..|+|||......++.++|+||+|+++|++++ |..|+...+........... .....+...+..+.+++..||..
T Consensus       163 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~  241 (262)
T cd05058         163 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG-RRLLQPEYCPDPLYEVMLSCWHP  241 (262)
T ss_pred             cCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-CCCCCCCcCCHHHHHHHHHHcCC
Confidence            34667999999887888899999999999999998 56667655443333322222 12222233346799999999999


Q ss_pred             CCCCCCCHhhH-HHHHHH
Q 041728           84 NPESRLIITLT-DGLKRL  100 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l  100 (108)
                      +|++||++.++ ..++.+
T Consensus       242 ~p~~Rp~~~~il~~l~~~  259 (262)
T cd05058         242 KPEMRPTFSELVSRIEQI  259 (262)
T ss_pred             ChhhCCCHHHHHHHHHHH
Confidence            99999999999 655554

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.75  E-value=4.1e-18  Score=99.66  Aligned_cols=98  Identities=18%  Similarity=0.254  Sum_probs=72.9

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..++..|++||......++.++|+||+|+++|++++|..|+........................ +..+.+++..||..
T Consensus       161 ~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~  239 (277)
T cd06640         161 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEF-SKPFKEFIDACLNK  239 (277)
T ss_pred             ccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhh-hHHHHHHHHHHccc
Confidence            34677899999988778889999999999999999999998766544333322222122222222 25688999999999


Q ss_pred             CCCCCCCHhhHHHHHHHHH
Q 041728           84 NPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l~~l~~  102 (108)
                      +|..||++.++..+..+..
T Consensus       240 ~p~~Rp~~~~il~~~~~~~  258 (277)
T cd06640         240 DPSFRPTAKELLKHKFIVK  258 (277)
T ss_pred             CcccCcCHHHHHhChHhhh
Confidence            9999999999976666654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.75  E-value=1.1e-17  Score=97.89  Aligned_cols=98  Identities=17%  Similarity=0.249  Sum_probs=72.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|+..|++||.+....++.++|+|++|++++++++|..|+........................ +..+.+++..||..
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~  239 (277)
T cd06642         161 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQY-SKPFKEFVEACLNK  239 (277)
T ss_pred             ccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCccc-CHHHHHHHHHHccC
Confidence            34778899999998888888999999999999999999998655433322222211111111222 36689999999999


Q ss_pred             CCCCCCCHhhHHHHHHHHH
Q 041728           84 NPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l~~l~~  102 (108)
                      +|++||++.+++.+.++..
T Consensus       240 ~p~~Rp~~~~il~~~~~~~  258 (277)
T cd06642         240 DPRFRPTAKELLKHKFITR  258 (277)
T ss_pred             CcccCcCHHHHHHhHHHHH
Confidence            9999999999976666653

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.75  E-value=8.9e-18  Score=99.19  Aligned_cols=99  Identities=16%  Similarity=0.114  Sum_probs=74.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcC-CCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP-IPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..++..|++||.+....++.++|+|++|+++|++++|..||............. ........+...+..+.+++.+||.
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  254 (296)
T cd06655         175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLE  254 (296)
T ss_pred             cCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhh
Confidence            457788999999988888899999999999999999999997665433322111 1111222222233679999999999


Q ss_pred             CCCCCCCCHhhHHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      .+|.+||++.++..++++..
T Consensus       255 ~dp~~Rpt~~~il~~~~~~~  274 (296)
T cd06655         255 MDVEKRGSAKELLQHPFLKL  274 (296)
T ss_pred             cChhhCCCHHHHhhChHhhh
Confidence            99999999999977777654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.75  E-value=6.5e-18  Score=97.95  Aligned_cols=92  Identities=24%  Similarity=0.252  Sum_probs=67.8

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+....++.++|+||+|+++|++++ |..||........................ +..+.+++.+||..+
T Consensus       166 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~~  244 (261)
T cd05072         166 FPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENC-PDELYDIMKTCWKEK  244 (261)
T ss_pred             cceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCC-CHHHHHHHHHHccCC
Confidence            4567999999888888889999999999999998 89998765443333322222111111222 367999999999999


Q ss_pred             CCCCCCHhhH-HHHH
Q 041728           85 PESRLIITLT-DGLK   98 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~   98 (108)
                      |++||+++++ ..|+
T Consensus       245 p~~Rp~~~~i~~~l~  259 (261)
T cd05072         245 AEERPTFDYLQSVLD  259 (261)
T ss_pred             cccCcCHHHHHHHHh
Confidence            9999999999 4443

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.74  E-value=4.2e-18  Score=107.95  Aligned_cols=89  Identities=17%  Similarity=0.282  Sum_probs=77.9

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .-+..|=|||.+.+.+|++++|+|+||+.+|||++ |..||.+....+++..+. ...++..|..++..++++|..||.-
T Consensus       276 kvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD-~~erLpRPk~csedIY~imk~cWah  354 (1039)
T KOG0199|consen  276 KVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID-AGERLPRPKYCSEDIYQIMKNCWAH  354 (1039)
T ss_pred             cCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc-ccccCCCCCCChHHHHHHHHHhccC
Confidence            34567999999999999999999999999999998 899999998887777666 3455666666768899999999999


Q ss_pred             CCCCCCCHhhH
Q 041728           84 NPESRLIITLT   94 (108)
Q Consensus        84 ~p~~Rp~~~~l   94 (108)
                      +|.+||+|.+|
T Consensus       355 ~paDRptFsai  365 (1039)
T KOG0199|consen  355 NPADRPTFSAI  365 (1039)
T ss_pred             CccccccHHHH
Confidence            99999999998

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.74  E-value=7.7e-18  Score=97.50  Aligned_cols=92  Identities=22%  Similarity=0.317  Sum_probs=68.9

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCCC
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNP   85 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p   85 (108)
                      +..|++||.+....++.++|+||+|+++|++++ |..||................ ....+...+..+.+++.+||..+|
T Consensus       161 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p  239 (257)
T cd05060         161 PLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE-RLPRPEECPQEIYSIMLSCWKYRP  239 (257)
T ss_pred             cccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHhcCCh
Confidence            457999999988888999999999999999997 999987665443333222221 122232333678999999999999


Q ss_pred             CCCCCHhhH-HHHHH
Q 041728           86 ESRLIITLT-DGLKR   99 (108)
Q Consensus        86 ~~Rp~~~~l-~~l~~   99 (108)
                      ++||++.+| ..+..
T Consensus       240 ~~Rp~~~~l~~~l~~  254 (257)
T cd05060         240 EDRPTFSELESTFRR  254 (257)
T ss_pred             hhCcCHHHHHHHHHh
Confidence            999999999 55544

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.74  E-value=9.4e-18  Score=97.52  Aligned_cols=97  Identities=14%  Similarity=0.088  Sum_probs=69.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch--hHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF--FLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..|++.|+|||.+....++.++|+|++|+++|++++|..|+....  .....................+..+.+++.+||
T Consensus       166 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  245 (267)
T cd08228         166 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCI  245 (267)
T ss_pred             CCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHC
Confidence            457888999999887778889999999999999999999886432  112222211111111111222366999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l  100 (108)
                      ..+|++||+++++ ..++.+
T Consensus       246 ~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         246 YPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             CCCcccCcCHHHHHHHHHHh
Confidence            9999999999999 555543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.74  E-value=1.8e-17  Score=97.86  Aligned_cols=95  Identities=25%  Similarity=0.303  Sum_probs=70.2

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCCC
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNP   85 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p   85 (108)
                      +..|++||......++.++|+||+|+++|++++ |..||................. ...+...+..+.+++.+||..+|
T Consensus       181 ~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p  259 (297)
T cd05089         181 PVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR-MEKPRNCDDEVYELMRQCWRDRP  259 (297)
T ss_pred             CccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHHcCCCh
Confidence            456999999887788899999999999999997 9999976654433332222211 11122233779999999999999


Q ss_pred             CCCCCHhhH-HHHHHHHH
Q 041728           86 ESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        86 ~~Rp~~~~l-~~l~~l~~  102 (108)
                      .+||++.++ ..+..+..
T Consensus       260 ~~Rp~~~~i~~~l~~~~~  277 (297)
T cd05089         260 YERPPFAQISVQLSRMLE  277 (297)
T ss_pred             hhCcCHHHHHHHHHHHHH
Confidence            999999999 65655543

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.74  E-value=1.3e-17  Score=97.10  Aligned_cols=94  Identities=22%  Similarity=0.165  Sum_probs=70.0

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+++.|++||......++.++|+||+|+++|++++ |..||.....................+.. ...+.+++..||..
T Consensus       175 ~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~  253 (272)
T cd05075         175 KMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDC-LDGLYSLMSSCWLL  253 (272)
T ss_pred             cCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCC-CHHHHHHHHHHcCC
Confidence            35667999999888888899999999999999998 78888765544433333222211222233 36799999999999


Q ss_pred             CCCCCCCHhhH-HHHHH
Q 041728           84 NPESRLIITLT-DGLKR   99 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~   99 (108)
                      +|++||++++| ..++.
T Consensus       254 ~p~~Rps~~~l~~~l~~  270 (272)
T cd05075         254 NPKDRPSFETLRCELEK  270 (272)
T ss_pred             CcccCcCHHHHHHHHHh
Confidence            99999999999 55544

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.74  E-value=1.7e-17  Score=96.64  Aligned_cols=93  Identities=23%  Similarity=0.241  Sum_probs=69.4

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+....++.++|+||+|++++++++ |..|+.+.................. +......+.+++.+||..+
T Consensus       177 ~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~  255 (273)
T cd05035         177 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQ-PEDCLDELYDLMYSCWRAD  255 (273)
T ss_pred             CCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-CcCCCHHHHHHHHHHcCCC
Confidence            4567999999877788899999999999999998 8888876654444332222211111 2223377999999999999


Q ss_pred             CCCCCCHhhH-HHHHH
Q 041728           85 PESRLIITLT-DGLKR   99 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~   99 (108)
                      |.+||++.++ ..+..
T Consensus       256 p~~Rp~~~e~~~~l~~  271 (273)
T cd05035         256 PKDRPTFTKLREVLEN  271 (273)
T ss_pred             hhhCcCHHHHHHHHHh
Confidence            9999999999 55544

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.74  E-value=5.1e-18  Score=98.61  Aligned_cols=93  Identities=17%  Similarity=0.166  Sum_probs=70.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|+..|++||.+....++.++|+|++|+++|++++|..||........................ +..+.+++..||+.
T Consensus       172 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~  250 (267)
T cd06628         172 LQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNI-SSEAIDFLEKTFEI  250 (267)
T ss_pred             cCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCCccc-CHHHHHHHHHHccC
Confidence            34778899999988888888999999999999999999999866544333322222122222233 37799999999999


Q ss_pred             CCCCCCCHhhHHHH
Q 041728           84 NPESRLIITLTDGL   97 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l   97 (108)
                      +|.+||++.++...
T Consensus       251 ~p~~Rp~~~~il~~  264 (267)
T cd06628         251 DHNKRPTAAELLKH  264 (267)
T ss_pred             CchhCcCHHHHhhC
Confidence            99999999998544

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.74  E-value=9.8e-18  Score=97.01  Aligned_cols=93  Identities=19%  Similarity=0.231  Sum_probs=69.0

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .++..|++||.+....++.++|+|++|+++|++++ |..|+.....................+.. +..+.+++.+||..
T Consensus       160 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~  238 (256)
T cd05082         160 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGC-PPVVYDVMKQCWHL  238 (256)
T ss_pred             ccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCC-CHHHHHHHHHHhcC
Confidence            34567999999887788889999999999999997 88888765443333322222222222333 37799999999999


Q ss_pred             CCCCCCCHhhH-HHHH
Q 041728           84 NPESRLIITLT-DGLK   98 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~   98 (108)
                      +|++||+++++ ..|+
T Consensus       239 ~p~~Rpt~~~l~~~l~  254 (256)
T cd05082         239 DAATRPSFLQLREQLE  254 (256)
T ss_pred             ChhhCcCHHHHHHHHh
Confidence            99999999999 5443

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.74  E-value=3.2e-18  Score=105.28  Aligned_cols=97  Identities=12%  Similarity=0.100  Sum_probs=75.6

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ++|+||-.|.+||++.+...+..+|+|+|||++|+|+.|++||.+.+..-....+...  ....|...++...+|+.+++
T Consensus       245 ~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l--~y~fp~~fp~~a~dLv~KLL  322 (604)
T KOG0592|consen  245 SSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL--DYEFPEGFPEDARDLIKKLL  322 (604)
T ss_pred             cceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh--cccCCCCCCHHHHHHHHHHH
Confidence            5699999999999999999999999999999999999999999987644333322111  11112222377999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ..||.+|.++.+|..+.+.
T Consensus       323 v~dp~~Rlt~~qIk~HpFF  341 (604)
T KOG0592|consen  323 VRDPSDRLTSQQIKAHPFF  341 (604)
T ss_pred             ccCccccccHHHHhhCccc
Confidence            9999999999998655544

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.73  E-value=1.4e-17  Score=98.31  Aligned_cols=98  Identities=17%  Similarity=0.138  Sum_probs=71.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc-CCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL-PIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..|++.|++||.+....++.++|+|++|+++|++++|..||............ .........+...+..+.+++.+||.
T Consensus       176 ~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  255 (296)
T cd06654         176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLD  255 (296)
T ss_pred             ccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCc
Confidence            46788999999988777889999999999999999999999765543322211 11111111222223668899999999


Q ss_pred             CCCCCCCCHhhHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .+|..||++.++..++++.
T Consensus       256 ~~p~~Rpt~~eil~~~~~~  274 (296)
T cd06654         256 MDVEKRGSAKELLQHQFLK  274 (296)
T ss_pred             CCcccCcCHHHHhhChhhh
Confidence            9999999999996655543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.73  E-value=3.2e-17  Score=97.21  Aligned_cols=100  Identities=21%  Similarity=0.271  Sum_probs=72.6

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      +++.|++||.+....++.++|+||+|+++|++++ |..|+................ ....+...+..+.+++..||..+
T Consensus       204 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~  282 (307)
T cd05098         204 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-RMDKPSNCTNELYMMMRDCWHAV  282 (307)
T ss_pred             CccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCC-CCCCCCcCCHHHHHHHHHHcccC
Confidence            3467999999887888899999999999999998 888886554332222222221 11112223377999999999999


Q ss_pred             CCCCCCHhhH-HHHHHHHHHHhc
Q 041728           85 PESRLIITLT-DGLKRLASFLLK  106 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l~~~~~~  106 (108)
                      |.+||++.++ ..++.+.....+
T Consensus       283 p~~Rps~~evl~~l~~~~~~~~~  305 (307)
T cd05098         283 PSQRPTFKQLVEDLDRILALTSN  305 (307)
T ss_pred             hhhCcCHHHHHHHHHHHHHHhhc
Confidence            9999999999 777777665443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.73  E-value=1.7e-17  Score=97.30  Aligned_cols=89  Identities=17%  Similarity=0.157  Sum_probs=66.7

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .++..|++||.+....++.++|+||+|++++++++ |..||.+................. .+...+..+.+++..||..
T Consensus       187 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~  265 (283)
T cd05090         187 LLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLP-CSEDCPPRMYSLMTECWQE  265 (283)
T ss_pred             CccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC-CCCCCCHHHHHHHHHHccc
Confidence            34567999999887888899999999999999998 888887654433333222221111 2223347799999999999


Q ss_pred             CCCCCCCHhhH
Q 041728           84 NPESRLIITLT   94 (108)
Q Consensus        84 ~p~~Rp~~~~l   94 (108)
                      +|.+||++.+|
T Consensus       266 ~p~~Rp~~~~i  276 (283)
T cd05090         266 GPSRRPRFKDI  276 (283)
T ss_pred             CcccCcCHHHH
Confidence            99999999998

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.73  E-value=1.3e-17  Score=98.89  Aligned_cols=97  Identities=18%  Similarity=0.109  Sum_probs=70.5

Q ss_pred             cccccceecccccc---cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAY---TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~---~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ..+++.|++||.+.   ...++.++|+|++|+++|++++|..|+.....................+...+..+.+++..|
T Consensus       171 ~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  250 (307)
T cd06607         171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSC  250 (307)
T ss_pred             ccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHH
Confidence            45778899999874   355778999999999999999999998876544433322222122222222336789999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      |..+|.+||++.+|..+.++
T Consensus       251 l~~~p~~Rp~~~~il~~~~~  270 (307)
T cd06607         251 LQKIPQDRPSSEELLKHRFV  270 (307)
T ss_pred             hcCChhhCcCHHHHhcChhh
Confidence            99999999999999555444

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.73  E-value=3.6e-18  Score=98.32  Aligned_cols=100  Identities=13%  Similarity=0.051  Sum_probs=73.5

Q ss_pred             cccccccceecccccc---cCCCcccccchhhhHHHHHHHhCCCCCCcchh-HHhhhhcCCCCCcCCCCCC-CchHHHHH
Q 041728            2 TDILLEFMNFFEGLAY---TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF-LQFQLHLPIPLDEMLDPRL-PPDPLFDV   76 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~---~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~l   76 (108)
                      +...|++.|||||.+.   ..+|+.++|+||+|+.++++.+|+.||.+.+. ......+.+..++.+.... ....+.+|
T Consensus       249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~f  328 (391)
T KOG0983|consen  249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSF  328 (391)
T ss_pred             ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHH
Confidence            4567999999999886   35688999999999999999999999987431 2222222222223333222 23669999


Q ss_pred             HhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           77 AFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      +..|+++|+.+||...+++++.++.
T Consensus       329 v~~CL~kd~r~RP~Y~~Ll~h~Fi~  353 (391)
T KOG0983|consen  329 VKDCLTKDHRKRPKYNKLLEHPFIK  353 (391)
T ss_pred             HHHHhhcCcccCcchHHHhcCccee
Confidence            9999999999999999987666553

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.73  E-value=1.5e-17  Score=96.76  Aligned_cols=91  Identities=20%  Similarity=0.240  Sum_probs=68.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|+..|++||.+....++.++|+|++|+++|++++|..|+.........................+..+.+++..||+.
T Consensus       173 ~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  252 (269)
T cd08528         173 VVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTP  252 (269)
T ss_pred             ccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCC
Confidence            45788899999998888889999999999999999999998765443332222222112222222336799999999999


Q ss_pred             CCCCCCCHhhH
Q 041728           84 NPESRLIITLT   94 (108)
Q Consensus        84 ~p~~Rp~~~~l   94 (108)
                      ||++||++.++
T Consensus       253 ~p~~Rp~~~e~  263 (269)
T cd08528         253 DAEARPDIIQV  263 (269)
T ss_pred             CCccCCCHHHH
Confidence            99999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.73  E-value=3.8e-18  Score=106.12  Aligned_cols=98  Identities=15%  Similarity=0.177  Sum_probs=74.3

Q ss_pred             ccccceeccccccc---CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC--CCcCCCC-CCCchHHHHHHh
Q 041728            5 LLEFMNFFEGLAYT---IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP--LDEMLDP-RLPPDPLFDVAF   78 (108)
Q Consensus         5 ~~~~~~~ape~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~l~~   78 (108)
                      .|...|||||++..   ..|+..+|||+||+++||+++|..||...+.-+++....++  .++.... ..++.++.+|+.
T Consensus       551 ~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~  630 (678)
T KOG0193|consen  551 HGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLS  630 (678)
T ss_pred             ccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHH
Confidence            46788999999873   67999999999999999999999999955444444444444  1222222 233368999999


Q ss_pred             hhcCCCCCCCCCHhhH-HHHHHHHH
Q 041728           79 SCLNGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        79 ~c~~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      .||..++++||.|.+| ..|..+..
T Consensus       631 ~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  631 DCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             HHHhcCcccCccHHHHHHHHHHhhh
Confidence            9999999999999999 54665544

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.73  E-value=1e-17  Score=97.09  Aligned_cols=93  Identities=22%  Similarity=0.335  Sum_probs=69.2

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||......++.++|+|++|++++++++ |..|+................. ...+...+..+.+++..||..+
T Consensus       166 ~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~  244 (261)
T cd05148         166 IPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYR-MPCPAKCPQEIYKIMLECWAAE  244 (261)
T ss_pred             CceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCc-CCCCCCCCHHHHHHHHHHcCCC
Confidence            4567999999888888889999999999999998 8889876554333332222211 1222233477999999999999


Q ss_pred             CCCCCCHhhH-HHHHH
Q 041728           85 PESRLIITLT-DGLKR   99 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~   99 (108)
                      |.+||+++++ ..|+.
T Consensus       245 p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         245 PEDRPSFKALREELDN  260 (261)
T ss_pred             chhCcCHHHHHHHHhc
Confidence            9999999999 65543

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.73  E-value=2.4e-17  Score=96.99  Aligned_cols=96  Identities=19%  Similarity=0.310  Sum_probs=71.7

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .++..|++||.+....++.++|+||+|++++++++ |..|+.+.............. ....+...+..+.+++..||..
T Consensus       190 ~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~cl~~  268 (290)
T cd05045         190 RIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGY-RMERPENCSEEMYNLMLTCWKQ  268 (290)
T ss_pred             CCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC-CCCCCCCCCHHHHHHHHHHccC
Confidence            34668999998887788899999999999999998 888987665444333322221 1122222336799999999999


Q ss_pred             CCCCCCCHhhH-HHHHHHH
Q 041728           84 NPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l~  101 (108)
                      +|.+||++.++ ..++.+.
T Consensus       269 ~P~~Rp~~~~i~~~l~~~~  287 (290)
T cd05045         269 EPDKRPTFADISKELEKMM  287 (290)
T ss_pred             CcccCCCHHHHHHHHHHHH
Confidence            99999999999 6666554

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.73  E-value=5.7e-18  Score=97.91  Aligned_cols=93  Identities=15%  Similarity=0.050  Sum_probs=69.5

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..+++.|+|||......++.++|+|++|++++++++|..|+........................+ ..+.+++..||..
T Consensus       162 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~  240 (257)
T cd08223         162 LIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYS-PELGELIATMLSK  240 (257)
T ss_pred             ccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccC-HHHHHHHHHHhcc
Confidence            457889999999888888889999999999999999999987554333222222222222222233 6799999999999


Q ss_pred             CCCCCCCHhhHHHH
Q 041728           84 NPESRLIITLTDGL   97 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l   97 (108)
                      +|.+||++.++...
T Consensus       241 ~p~~Rp~~~~~l~~  254 (257)
T cd08223         241 RPEKRPSVKSILRQ  254 (257)
T ss_pred             CcccCCCHHHHhcC
Confidence            99999999998543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.73  E-value=1.6e-17  Score=99.64  Aligned_cols=100  Identities=14%  Similarity=0.073  Sum_probs=70.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh----------------------------
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH----------------------------   55 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~----------------------------   55 (108)
                      ..|+..|+|||.+.+..++.++|+||+|+++|++++|..||...........                            
T Consensus       162 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (333)
T cd06650         162 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSY  241 (333)
T ss_pred             CCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhh
Confidence            4688899999999887888999999999999999999999864332111000                            


Q ss_pred             ----------------cCCCCCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHHH
Q 041728           56 ----------------LPIPLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLASF  103 (108)
Q Consensus        56 ----------------~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~~  103 (108)
                                      ..............+.++.+++.+||+.||++||++.++..+.++...
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  305 (333)
T cd06650         242 GPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  305 (333)
T ss_pred             cccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence                            000000000011123568899999999999999999999777777543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.73  E-value=1.9e-17  Score=95.84  Aligned_cols=89  Identities=25%  Similarity=0.351  Sum_probs=68.3

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|+|||.+....++.++|+||+|+++|++++ |+.||................ ....+...+..+.+++..||..+
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~li~~c~~~~  241 (256)
T cd05114         163 FPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF-RLYRPKLASMTVYEVMYSCWHEK  241 (256)
T ss_pred             CchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHccCC
Confidence            4567999999987788899999999999999998 888987665444433332221 12223334477999999999999


Q ss_pred             CCCCCCHhhHH
Q 041728           85 PESRLIITLTD   95 (108)
Q Consensus        85 p~~Rp~~~~l~   95 (108)
                      |.+||+++++.
T Consensus       242 p~~Rps~~~l~  252 (256)
T cd05114         242 PEGRPTFAELL  252 (256)
T ss_pred             cccCcCHHHHH
Confidence            99999999983

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.73  E-value=1.2e-17  Score=97.65  Aligned_cols=88  Identities=20%  Similarity=0.181  Sum_probs=65.6

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCCC
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNP   85 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p   85 (108)
                      +..|++||.+....++.++|+||+|+++|++++ |..||.+.....................+ +..+.+++.+||+.+|
T Consensus       184 ~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~cl~~~p  262 (277)
T cd05036         184 PIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPKGC-PGPVYRIMTDCWQHTP  262 (277)
T ss_pred             cHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCC-CHHHHHHHHHHcCCCc
Confidence            457999999988889999999999999999996 88898765433332222111111112233 3779999999999999


Q ss_pred             CCCCCHhhHH
Q 041728           86 ESRLIITLTD   95 (108)
Q Consensus        86 ~~Rp~~~~l~   95 (108)
                      ++||++.+|+
T Consensus       263 ~~Rps~~~vl  272 (277)
T cd05036         263 EDRPNFATIL  272 (277)
T ss_pred             ccCcCHHHHH
Confidence            9999999983

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.73  E-value=1.9e-17  Score=98.53  Aligned_cols=95  Identities=18%  Similarity=0.221  Sum_probs=69.9

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+....++.++|+||+|+++|++++ |..|+.+............. .....+......+.+++..||..+
T Consensus       173 ~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~  251 (316)
T cd05108         173 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-ERLPQPPICTIDVYMIMVKCWMID  251 (316)
T ss_pred             cceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHHccCC
Confidence            3567999999988888999999999999999987 89998765443322222222 112222233467999999999999


Q ss_pred             CCCCCCHhhH-HHHHHHH
Q 041728           85 PESRLIITLT-DGLKRLA  101 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l~  101 (108)
                      |..||++.++ ..+..+.
T Consensus       252 p~~Rps~~~l~~~l~~~~  269 (316)
T cd05108         252 ADSRPKFRELIIEFSKMA  269 (316)
T ss_pred             hhhCcCHHHHHHHHHHHH
Confidence            9999999999 5555443

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.73  E-value=2e-17  Score=97.36  Aligned_cols=95  Identities=22%  Similarity=0.308  Sum_probs=69.4

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+....++.++|+||+|+++|++++ |..|+................ ....+...+..+.+++.+||..+
T Consensus       196 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~  274 (293)
T cd05053         196 LPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGY-RMEKPQNCTQELYHLMRDCWHEV  274 (293)
T ss_pred             CCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcccC
Confidence            4567999999887888899999999999999987 888887654333222222211 11122223367999999999999


Q ss_pred             CCCCCCHhhH-HHHHHHH
Q 041728           85 PESRLIITLT-DGLKRLA  101 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l~  101 (108)
                      |.+||++.++ ..++.+.
T Consensus       275 p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         275 PSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             cccCcCHHHHHHHHHHhh
Confidence            9999999999 6666553

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.73  E-value=1.9e-17  Score=101.42  Aligned_cols=95  Identities=22%  Similarity=0.332  Sum_probs=68.3

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhh-hcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQL-HLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      .+++.|+|||.+....++.++|+||+|+++|++++ |..|+.......... ..... .....+...+..+.+++.+||.
T Consensus       300 ~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~  378 (400)
T cd05105         300 FLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSG-YRMAKPDHATQEVYDIMVKCWN  378 (400)
T ss_pred             CCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcC-CCCCCCccCCHHHHHHHHHHCc
Confidence            35678999999988888899999999999999987 888887543222111 11111 1111222234779999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l  100 (108)
                      .+|++||++.+| ..+..+
T Consensus       379 ~dP~~RPt~~~l~~~l~~l  397 (400)
T cd05105         379 SEPEKRPSFLHLSDIVESL  397 (400)
T ss_pred             cCHhHCcCHHHHHHHHHHH
Confidence            999999999999 555543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.73  E-value=5.4e-18  Score=98.02  Aligned_cols=90  Identities=18%  Similarity=0.134  Sum_probs=69.5

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|+|||.+....++.++|+|++|++++++++|..||........................+ ..+.+++.+||..
T Consensus       160 ~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~  238 (255)
T cd08219         160 YVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYS-YELRSLIKQMFKR  238 (255)
T ss_pred             ccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccC-HHHHHHHHHHHhC
Confidence            457888999999887778889999999999999999999998765444333322222222223333 6689999999999


Q ss_pred             CCCCCCCHhhH
Q 041728           84 NPESRLIITLT   94 (108)
Q Consensus        84 ~p~~Rp~~~~l   94 (108)
                      +|.+||++.++
T Consensus       239 ~P~~Rp~~~~i  249 (255)
T cd08219         239 NPRSRPSATTI  249 (255)
T ss_pred             CcccCCCHHHH
Confidence            99999999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.73  E-value=1e-17  Score=108.00  Aligned_cols=98  Identities=14%  Similarity=-0.001  Sum_probs=73.8

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCC--cCCCCCCCchHHHHHHhhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLD--EMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~c   80 (108)
                      .++||+.|+|||++....++.++|||++||++|++++|..||.+.........+.....  ......+ ...+.+++..|
T Consensus       539 ~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~-~~~~~~~l~~l  617 (669)
T cd05610         539 RILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKL-SVNAQNAIEIL  617 (669)
T ss_pred             ceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccC-CHHHHHHHHHH
Confidence            35789999999999888899999999999999999999999986654443332211111  1111122 36688999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      |..+|.+||++.+++.+.++.
T Consensus       618 L~~dP~~R~ta~e~l~h~~~~  638 (669)
T cd05610         618 LTMDPTKRAGLKELKQHPLFH  638 (669)
T ss_pred             cccChhHCcCHHHHHhCHhhc
Confidence            999999999999997776653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.73  E-value=3.1e-17  Score=95.44  Aligned_cols=92  Identities=18%  Similarity=0.209  Sum_probs=67.9

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCCC
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNP   85 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p   85 (108)
                      +..|++||.+....++.++|+|++|+++|++++ |..||............... .....+...+..+.+++..||..+|
T Consensus       173 ~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~li~~c~~~~p  251 (268)
T cd05063         173 PIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG-FRLPAPMDCPSAVYQLMLQCWQQDR  251 (268)
T ss_pred             CceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCCc
Confidence            346999999888888899999999999999987 99998765443333322222 1111222233678999999999999


Q ss_pred             CCCCCHhhH-HHHHH
Q 041728           86 ESRLIITLT-DGLKR   99 (108)
Q Consensus        86 ~~Rp~~~~l-~~l~~   99 (108)
                      .+||++.+| ..+..
T Consensus       252 ~~Rp~~~~i~~~l~~  266 (268)
T cd05063         252 ARRPRFVDIVNLLDK  266 (268)
T ss_pred             ccCcCHHHHHHHHHh
Confidence            999999999 55554

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.73  E-value=3e-17  Score=95.53  Aligned_cols=88  Identities=23%  Similarity=0.355  Sum_probs=66.6

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+....++.++|+||+|+++|++++ |..||................ ....+...+..+.+++..||..+
T Consensus       175 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~  253 (269)
T cd05044         175 LPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGG-RLQKPENCPDKIYQLMTNCWAQD  253 (269)
T ss_pred             CCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCC-ccCCcccchHHHHHHHHHHcCCC
Confidence            4567999999988888999999999999999998 999987655444333322221 11112223367899999999999


Q ss_pred             CCCCCCHhhH
Q 041728           85 PESRLIITLT   94 (108)
Q Consensus        85 p~~Rp~~~~l   94 (108)
                      |.+||+++++
T Consensus       254 p~~Rp~~~~i  263 (269)
T cd05044         254 PSERPTFDRI  263 (269)
T ss_pred             cccCCCHHHH
Confidence            9999999998

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.72  E-value=2.4e-17  Score=95.62  Aligned_cols=88  Identities=24%  Similarity=0.303  Sum_probs=66.5

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|+|||......++.++|+||+|+++|++++ |..||................ ....+...+..+.+++.+||..+
T Consensus       165 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~  243 (260)
T cd05070         165 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY-RMPCPQDCPISLHELMLQCWKKD  243 (260)
T ss_pred             CCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCcCCHHHHHHHHHHcccC
Confidence            4567999999887888889999999999999998 888887665444333322221 11112223367999999999999


Q ss_pred             CCCCCCHhhH
Q 041728           85 PESRLIITLT   94 (108)
Q Consensus        85 p~~Rp~~~~l   94 (108)
                      |.+||+++++
T Consensus       244 p~~Rpt~~~l  253 (260)
T cd05070         244 PEERPTFEYL  253 (260)
T ss_pred             cccCcCHHHH
Confidence            9999999998

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=5e-19  Score=112.36  Aligned_cols=99  Identities=14%  Similarity=0.151  Sum_probs=74.3

Q ss_pred             cccccccceecccccccC--CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCC---chHHHHH
Q 041728            2 TDILLEFMNFFEGLAYTI--KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLP---PDPLFDV   76 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~--~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l   76 (108)
                      .+|.||..|||||++-.+  .|...+|||||||.+.||.+|++||......+..-.. .+.. -..|.+|   ..++.+|
T Consensus       734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFk-VGmy-KvHP~iPeelsaeak~F  811 (1226)
T KOG4279|consen  734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFK-VGMY-KVHPPIPEELSAEAKNF  811 (1226)
T ss_pred             cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhh-hcce-ecCCCCcHHHHHHHHHH
Confidence            468899999999999864  4788999999999999999999999876544333211 1111 1123333   2679999


Q ss_pred             HhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           77 AFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      +.+|+..+|..||++++++.-.+|..
T Consensus       812 ilrcFepd~~~R~sA~~LL~DpFlq~  837 (1226)
T KOG4279|consen  812 ILRCFEPDPCDRPSAKDLLQDPFLQH  837 (1226)
T ss_pred             HHHHcCCCcccCccHHHhccCccccc
Confidence            99999999999999999865555543

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.72  E-value=2.4e-17  Score=95.36  Aligned_cols=90  Identities=20%  Similarity=0.296  Sum_probs=67.4

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .++..|++||.+....++.++|+||+|++++++++ |..|+......+..............+...+..+.+++..||..
T Consensus       161 ~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  240 (257)
T cd05040         161 KVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAH  240 (257)
T ss_pred             CCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCC
Confidence            46678999999888888899999999999999998 99998755444332221111111222223347799999999999


Q ss_pred             CCCCCCCHhhH
Q 041728           84 NPESRLIITLT   94 (108)
Q Consensus        84 ~p~~Rp~~~~l   94 (108)
                      +|++||++.++
T Consensus       241 ~p~~Rps~~~~  251 (257)
T cd05040         241 NPADRPTFAAL  251 (257)
T ss_pred             CcccCCCHHHH
Confidence            99999999998

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.72  E-value=2.1e-17  Score=96.48  Aligned_cols=92  Identities=23%  Similarity=0.212  Sum_probs=68.2

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .++..|+|||.+....++.++|+|++|+++|++++ |..||................. ...+...+..+.+++..||+.
T Consensus       182 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~  260 (277)
T cd05032         182 LLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGH-LDLPENCPDKLLELMRMCWQY  260 (277)
T ss_pred             CccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHHcCC
Confidence            35678999999887788899999999999999998 8888875543333332222211 112222347799999999999


Q ss_pred             CCCCCCCHhhH-HHH
Q 041728           84 NPESRLIITLT-DGL   97 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l   97 (108)
                      +|++||++.++ ..+
T Consensus       261 ~p~~Rpt~~~l~~~l  275 (277)
T cd05032         261 NPKMRPTFLEIVSSL  275 (277)
T ss_pred             ChhhCCCHHHHHHHh
Confidence            99999999998 443

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.72  E-value=1.7e-17  Score=97.05  Aligned_cols=88  Identities=23%  Similarity=0.143  Sum_probs=66.4

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      +++.|+|||.+....++.++|+||+|+++|++++ |..|+.+..................... .+..+.+++.+||+.+
T Consensus       183 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~  261 (277)
T cd05062         183 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYN  261 (277)
T ss_pred             cCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCC-CCHHHHHHHHHHcCCC
Confidence            4667999999988888899999999999999998 7888876654433332222211112222 3367999999999999


Q ss_pred             CCCCCCHhhH
Q 041728           85 PESRLIITLT   94 (108)
Q Consensus        85 p~~Rp~~~~l   94 (108)
                      |.+||++.++
T Consensus       262 p~~Rps~~e~  271 (277)
T cd05062         262 PKMRPSFLEI  271 (277)
T ss_pred             hhhCcCHHHH
Confidence            9999999998

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.72  E-value=2.1e-18  Score=101.21  Aligned_cols=94  Identities=14%  Similarity=0.076  Sum_probs=66.7

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh---cC-------------CC------CC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH---LP-------------IP------LD   61 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------~~------~~   61 (108)
                      ..|++.|+|||.+.+..++.++|+||+|+++|++++|+.||.+.........   ..             ..      ..
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (287)
T cd07848         161 YVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFP  240 (287)
T ss_pred             cccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccC
Confidence            4688999999999888888999999999999999999999976532211110   00             00      00


Q ss_pred             cCCC--------CCCCchHHHHHHhhhcCCCCCCCCCHhhHHHH
Q 041728           62 EMLD--------PRLPPDPLFDVAFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        62 ~~~~--------~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                      ....        ....+..+.+++.+||..||++||++++++.+
T Consensus       241 ~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h  284 (287)
T cd07848         241 AVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH  284 (287)
T ss_pred             cccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            0000        00122568999999999999999999998544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.72  E-value=1e-17  Score=98.40  Aligned_cols=95  Identities=16%  Similarity=0.079  Sum_probs=68.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHH---hhh-hcCCCCCcCCCCCCCchHHHHHHhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ---FQL-HLPIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ..|+..|+|||.+....++.++|+||+|+++|++++|..||.......   ... ..... ........ +..+.+++..
T Consensus       161 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~-s~~~~~li~~  238 (285)
T cd05631         161 RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKED-QEEYSEKF-SEDAKSICRM  238 (285)
T ss_pred             CCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcc-cccCCccC-CHHHHHHHHH
Confidence            468999999999988889999999999999999999999997543211   111 11111 11111222 3679999999


Q ss_pred             hcCCCCCCCCC-----HhhHHHHHHH
Q 041728           80 CLNGNPESRLI-----ITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~-----~~~l~~l~~l  100 (108)
                      ||..+|.+|++     ++++..+.++
T Consensus       239 ~l~~~P~~R~~~~~~~~~~~~~h~~~  264 (285)
T cd05631         239 LLTKNPKERLGCRGNGAAGVKQHPIF  264 (285)
T ss_pred             HhhcCHHHhcCCCCCCHHHHhcCHhh
Confidence            99999999997     6777555544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=6.7e-18  Score=101.10  Aligned_cols=97  Identities=13%  Similarity=0.016  Sum_probs=71.4

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcC---CCCCcC--CC--CCCCchHHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP---IPLDEM--LD--PRLPPDPLFD   75 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~--~~~~~~~~~~   75 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||.............   ......  ..  ..+ ..++.+
T Consensus       157 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-s~~~~~  235 (333)
T cd05600         157 SVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNL-SDEAWD  235 (333)
T ss_pred             CcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCcccccc-CHHHHH
Confidence            4578999999999988888999999999999999999999998655433222111   110111  00  112 367999


Q ss_pred             HHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ++.+||..+|.+||++.++..+.++
T Consensus       236 li~~~l~~~~~rr~s~~~ll~h~~~  260 (333)
T cd05600         236 LITKLINDPSRRFGSLEDIKNHPFF  260 (333)
T ss_pred             HHHHHhhChhhhcCCHHHHHhCccc
Confidence            9999999999999999999655544

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.72  E-value=4.1e-17  Score=94.89  Aligned_cols=94  Identities=19%  Similarity=0.268  Sum_probs=68.9

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+....++.++|+|++|++++++++ |..|+................. ...+...+..+.+++..||+.+
T Consensus       170 ~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~  248 (266)
T cd05033         170 IPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYR-LPPPMDCPSALYQLMLDCWQKD  248 (266)
T ss_pred             CCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCC
Confidence            4567999999988888999999999999999987 8888865543333222222111 1112233477999999999999


Q ss_pred             CCCCCCHhhH-HHHHHH
Q 041728           85 PESRLIITLT-DGLKRL  100 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l  100 (108)
                      |++||++++| ..+..+
T Consensus       249 p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         249 RNERPTFSQIVSTLDKM  265 (266)
T ss_pred             cccCcCHHHHHHHHHhh
Confidence            9999999999 555543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.72  E-value=6.7e-18  Score=97.50  Aligned_cols=94  Identities=19%  Similarity=0.253  Sum_probs=69.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCC-CcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPL-DEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..++..|++||.+.+..++.++|+|++|+++|++++|..|+................ .....+...+..+.+++..||+
T Consensus       159 ~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  238 (256)
T cd06612         159 VIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLV  238 (256)
T ss_pred             ccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHh
Confidence            346788999999888888899999999999999999999987655433332221111 1111122223678999999999


Q ss_pred             CCCCCCCCHhhHHHH
Q 041728           83 GNPESRLIITLTDGL   97 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l   97 (108)
                      .+|.+||++++++.+
T Consensus       239 ~~P~~Rps~~~il~~  253 (256)
T cd06612         239 KDPEERPSAIQLLQH  253 (256)
T ss_pred             cChhhCcCHHHHhcC
Confidence            999999999998544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.72  E-value=1.4e-17  Score=96.40  Aligned_cols=94  Identities=20%  Similarity=0.118  Sum_probs=71.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..++..|++||.+....++.++|+|++|++++++++|..|+........................+ ..+.+++..|+..
T Consensus       170 ~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~l~~  248 (265)
T cd08217         170 YVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYS-SELNEVIKSMLNV  248 (265)
T ss_pred             cccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccC-HHHHHHHHHHccC
Confidence            457889999999988888889999999999999999999987654333222222222222222333 6799999999999


Q ss_pred             CCCCCCCHhhHHHHH
Q 041728           84 NPESRLIITLTDGLK   98 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l~   98 (108)
                      +|.+||++.+|++++
T Consensus       249 ~p~~Rp~~~~il~~~  263 (265)
T cd08217         249 DPDKRPSTEELLQLP  263 (265)
T ss_pred             CcccCCCHHHHhhCC
Confidence            999999999996554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.72  E-value=1e-17  Score=96.83  Aligned_cols=92  Identities=17%  Similarity=0.155  Sum_probs=70.7

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|+|||......++.++|+|++|++++++++|..|+.....................+..+ ..+.+++..||..
T Consensus       162 ~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~l~~  240 (257)
T cd08225         162 CVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFS-RDLRSLISQLFKV  240 (257)
T ss_pred             cCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCC-HHHHHHHHHHhcc
Confidence            357888999999887788899999999999999999999987665444433322222222333333 6799999999999


Q ss_pred             CCCCCCCHhhHHH
Q 041728           84 NPESRLIITLTDG   96 (108)
Q Consensus        84 ~p~~Rp~~~~l~~   96 (108)
                      +|++||++.++..
T Consensus       241 ~p~~Rpt~~~ll~  253 (257)
T cd08225         241 SPRDRPSITSILK  253 (257)
T ss_pred             ChhhCcCHHHHhh
Confidence            9999999999854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.72  E-value=2.9e-17  Score=97.24  Aligned_cols=93  Identities=19%  Similarity=0.306  Sum_probs=67.3

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhh-hcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQL-HLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ++..|++||.+....++.++|+||+|+++|++++ |..|+.......... ..... .....+...+..+.+++.+||..
T Consensus       205 ~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~  283 (302)
T cd05055         205 LPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEG-YRMAQPEHAPAEIYDIMKTCWDA  283 (302)
T ss_pred             cccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcCC
Confidence            4567999999888888899999999999999998 888887544222211 11111 11112222336799999999999


Q ss_pred             CCCCCCCHhhH-HHHHH
Q 041728           84 NPESRLIITLT-DGLKR   99 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~   99 (108)
                      +|++||++.++ ..+..
T Consensus       284 ~p~~Rpt~~ell~~l~~  300 (302)
T cd05055         284 DPLKRPTFKQIVQLIGK  300 (302)
T ss_pred             CchhCcCHHHHHHHHHh
Confidence            99999999999 54543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.72  E-value=1.1e-17  Score=96.70  Aligned_cols=93  Identities=12%  Similarity=0.075  Sum_probs=69.7

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|++||......++.++|+|++|++++++++|..|+........................ +..+.+++.+||..
T Consensus       161 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~  239 (256)
T cd08218         161 CIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHY-SYDLRNLVSQLFKR  239 (256)
T ss_pred             ccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccC-CHHHHHHHHHHhhC
Confidence            35778899999988788888999999999999999999998765443333322222222222223 36799999999999


Q ss_pred             CCCCCCCHhhHHHH
Q 041728           84 NPESRLIITLTDGL   97 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l   97 (108)
                      +|.+||++.+|+..
T Consensus       240 ~p~~Rp~~~~vl~~  253 (256)
T cd08218         240 NPRDRPSVNSILEK  253 (256)
T ss_pred             ChhhCcCHHHHhhC
Confidence            99999999999543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.72  E-value=3.2e-17  Score=95.61  Aligned_cols=93  Identities=23%  Similarity=0.286  Sum_probs=68.3

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCCC
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNP   85 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p   85 (108)
                      +..|++||.+....++.++|+||+|++++++++ |..||................ ....+...+..+.+++.+||..+|
T Consensus       174 ~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p  252 (270)
T cd05047         174 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-RLEKPLNCDDEVYDLMRQCWREKP  252 (270)
T ss_pred             ccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC-CCCCCCcCCHHHHHHHHHHcccCh
Confidence            456999999887888899999999999999997 899987654333322222211 111122233678999999999999


Q ss_pred             CCCCCHhhH-HHHHHH
Q 041728           86 ESRLIITLT-DGLKRL  100 (108)
Q Consensus        86 ~~Rp~~~~l-~~l~~l  100 (108)
                      .+||++.++ ..|..+
T Consensus       253 ~~Rps~~~il~~l~~~  268 (270)
T cd05047         253 YERPSFAQILVSLNRM  268 (270)
T ss_pred             hhCCCHHHHHHHHHHh
Confidence            999999999 666654

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.72  E-value=6.6e-17  Score=96.15  Aligned_cols=95  Identities=18%  Similarity=0.228  Sum_probs=69.9

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCCC
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNP   85 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p   85 (108)
                      +..|++||.+....++.++|+|++|+++|++++ |..||.+.................. +...+..+.+++..||..+|
T Consensus       199 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~~p  277 (314)
T cd05099         199 PVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDK-PSNCTHELYMLMRECWHAVP  277 (314)
T ss_pred             CccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCCc
Confidence            457999999887888899999999999999998 8888876544333322222211111 22223678999999999999


Q ss_pred             CCCCCHhhH-HHHHHHHH
Q 041728           86 ESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        86 ~~Rp~~~~l-~~l~~l~~  102 (108)
                      .+||++.++ ..+..+..
T Consensus       278 ~~Rps~~~ll~~l~~~~~  295 (314)
T cd05099         278 TQRPTFKQLVEALDKVLA  295 (314)
T ss_pred             ccCcCHHHHHHHHHHHHH
Confidence            999999999 66766654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.72  E-value=1.7e-17  Score=95.80  Aligned_cols=92  Identities=15%  Similarity=0.134  Sum_probs=69.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..++..|++||.+....++.++|+||+|+++|++++|..|+........................ +..+.+++..||..
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~~l~~  239 (256)
T cd08220         161 VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRY-SPDLRQLILSMLNL  239 (256)
T ss_pred             cccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCc-CHHHHHHHHHHccC
Confidence            45778899999998777888999999999999999999998766543333222222122222223 36799999999999


Q ss_pred             CCCCCCCHhhHHH
Q 041728           84 NPESRLIITLTDG   96 (108)
Q Consensus        84 ~p~~Rp~~~~l~~   96 (108)
                      +|.+||++.++..
T Consensus       240 ~p~~Rpt~~~ll~  252 (256)
T cd08220         240 DPSKRPQLSQIMA  252 (256)
T ss_pred             ChhhCCCHHHHhh
Confidence            9999999999854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.72  E-value=4.1e-17  Score=94.62  Aligned_cols=88  Identities=24%  Similarity=0.311  Sum_probs=67.0

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+....++.++|+||+|++++++++ |..||.+.............. ....+...+.++.+++.+||..+
T Consensus       165 ~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~  243 (260)
T cd05067         165 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGY-RMPRPDNCPEELYELMRLCWKEK  243 (260)
T ss_pred             ccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHccCC
Confidence            4567999999887888889999999999999998 999997665443333222221 11222233477999999999999


Q ss_pred             CCCCCCHhhH
Q 041728           85 PESRLIITLT   94 (108)
Q Consensus        85 p~~Rp~~~~l   94 (108)
                      |++||+++++
T Consensus       244 p~~Rp~~~~l  253 (260)
T cd05067         244 PEERPTFEYL  253 (260)
T ss_pred             hhhCCCHHHH
Confidence            9999999998

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.72  E-value=1.9e-17  Score=93.83  Aligned_cols=95  Identities=19%  Similarity=0.212  Sum_probs=67.4

Q ss_pred             cccceeccccccc---CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh--hcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            6 LEFMNFFEGLAYT---IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL--HLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         6 ~~~~~~ape~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      -|..|.|||.++-   ...+.++||||+||++|.++.|..||.-........  .+.+...........++.+.++++.|
T Consensus       200 Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~m  279 (302)
T KOG2345|consen  200 CTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSM  279 (302)
T ss_pred             CCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHH
Confidence            4678999998873   446789999999999999999999997443221111  22222222222222347799999999


Q ss_pred             cCCCCCCCCCHhhH-HHHHHH
Q 041728           81 LNGNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l-~~l~~l  100 (108)
                      ++.||.+||++.++ .+++.+
T Consensus       280 lqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  280 LQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             hcCCcccCCCHHHHHHHHHhh
Confidence            99999999999998 655544

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.72  E-value=7.3e-17  Score=94.03  Aligned_cols=95  Identities=19%  Similarity=0.209  Sum_probs=69.6

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+....++.++|+||+|++++++++ |..||.....................+.+ +..+.+++.+||..+
T Consensus       170 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~~  248 (270)
T cd05056         170 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNC-PPTLYSLMTKCWAYD  248 (270)
T ss_pred             ccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCC-CHHHHHHHHHHcCCC
Confidence            3457999999887788899999999999999886 99998765543333322222111122233 377999999999999


Q ss_pred             CCCCCCHhhH-HHHHHHH
Q 041728           85 PESRLIITLT-DGLKRLA  101 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l~  101 (108)
                      |.+||++.++ ..+..+.
T Consensus       249 P~~Rpt~~~~~~~l~~~~  266 (270)
T cd05056         249 PSKRPRFTELKAQLSDIL  266 (270)
T ss_pred             hhhCcCHHHHHHHHHHHH
Confidence            9999999998 6666543

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.72  E-value=4.7e-17  Score=94.59  Aligned_cols=97  Identities=20%  Similarity=0.121  Sum_probs=69.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH--HhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL--QFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..|+..|++||......++.++|+|++|+++|++++|..||......  ...............+...+..+.+++.+||
T Consensus       166 ~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  245 (267)
T cd08229         166 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCI  245 (267)
T ss_pred             ccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhc
Confidence            45788899999998888888999999999999999999998644321  1111111111111112223367999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l  100 (108)
                      ..+|.+||++++| ..+.++
T Consensus       246 ~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         246 NPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             CCCcccCCCHHHHHHHHhhh
Confidence            9999999999998 544443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.72  E-value=5.9e-18  Score=101.01  Aligned_cols=95  Identities=13%  Similarity=0.020  Sum_probs=70.9

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|..||.+...............  ..+...+..+.+++.+||..
T Consensus       155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~  232 (323)
T cd05571         155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI--RFPRTLSPEAKSLLAGLLKK  232 (323)
T ss_pred             eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHccC
Confidence            5689999999999888899999999999999999999999976543332222211111  11222337799999999999


Q ss_pred             CCCCCC-----CHhhHHHHHHH
Q 041728           84 NPESRL-----IITLTDGLKRL  100 (108)
Q Consensus        84 ~p~~Rp-----~~~~l~~l~~l  100 (108)
                      ||++|+     ++.++..+.++
T Consensus       233 dP~~R~~~~~~~~~~ll~h~~f  254 (323)
T cd05571         233 DPKQRLGGGPEDAKEIMEHRFF  254 (323)
T ss_pred             CHHHcCCCCCCCHHHHHcCCCc
Confidence            999999     67777554443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=4.5e-17  Score=95.16  Aligned_cols=99  Identities=16%  Similarity=0.180  Sum_probs=72.2

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..|+..|++||.+... .++.++|+|++|+++|++++|..|+.+..........................+.+++..||.
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  240 (277)
T cd06917         161 FVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAACLD  240 (277)
T ss_pred             ccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHHcC
Confidence            3577889999988653 467899999999999999999999987654443332222211112221123679999999999


Q ss_pred             CCCCCCCCHhhHHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      .+|++||++.++..+.++..
T Consensus       241 ~~p~~R~~~~~il~~~~~~~  260 (277)
T cd06917         241 EEPKERLSAEELLKSKWIKA  260 (277)
T ss_pred             CCcccCcCHHHHhhChHhhc
Confidence            99999999999976776644

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.71  E-value=1.7e-17  Score=96.54  Aligned_cols=95  Identities=14%  Similarity=0.041  Sum_probs=67.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..++..|+|||.+....++.++|+|++|+++|++++|..||.....................+......+..++ .||..
T Consensus       169 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~  247 (266)
T cd06651         169 VTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFV  247 (266)
T ss_pred             CCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcC
Confidence            34777899999998777888999999999999999999999766544433322221111111222235577777 67778


Q ss_pred             CCCCCCCHhhHHHHHH
Q 041728           84 NPESRLIITLTDGLKR   99 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l~~   99 (108)
                      +|++||++++|..+..
T Consensus       248 ~p~~Rp~~~eil~hp~  263 (266)
T cd06651         248 EARHRPSAEELLRHPF  263 (266)
T ss_pred             ChhhCcCHHHHhcCcc
Confidence            9999999999965443

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.71  E-value=8.7e-18  Score=100.13  Aligned_cols=92  Identities=18%  Similarity=0.093  Sum_probs=70.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|+|||.+.+..++.++|+||+|+++|++++|..||................  ...+...+..+.+++.+||..
T Consensus       156 ~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~li~~~l~~  233 (318)
T cd05570         156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDE--VRYPRWLSKEAKSILKSFLTK  233 (318)
T ss_pred             eecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC--CCCCCcCCHHHHHHHHHHccC
Confidence            458899999999988889999999999999999999999998665443333222211  112223347799999999999


Q ss_pred             CCCCCCCH-----hhHHHH
Q 041728           84 NPESRLII-----TLTDGL   97 (108)
Q Consensus        84 ~p~~Rp~~-----~~l~~l   97 (108)
                      ||.+||++     .++..+
T Consensus       234 dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         234 NPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             CHHHcCCCCCCCHHHHhcC
Confidence            99999998     666443

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.71  E-value=4.2e-17  Score=99.92  Aligned_cols=95  Identities=19%  Similarity=0.260  Sum_probs=69.1

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhh-hcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQL-HLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      .+++.|++||.+....++.++|+|++|+++|++++ |..|+.......... ..... .....+...+.++.+++.+||.
T Consensus       302 ~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~l~~li~~cl~  380 (401)
T cd05107         302 FLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRG-YRMAKPAHASDEIYEIMQKCWE  380 (401)
T ss_pred             CCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcC
Confidence            45678999999987888889999999999999998 888887544322221 11111 1122233334779999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l  100 (108)
                      .+|..||++++| ..|+.+
T Consensus       381 ~~P~~RPs~~ell~~L~~~  399 (401)
T cd05107         381 EKFEIRPDFSQLVHLVGDL  399 (401)
T ss_pred             CChhHCcCHHHHHHHHHHH
Confidence            999999999999 555543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.71  E-value=9.7e-18  Score=100.01  Aligned_cols=87  Identities=15%  Similarity=0.097  Sum_probs=67.8

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||...........+....  ...+...+..+.+++..|++
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~li~~~L~  232 (320)
T cd05590         155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE--VVYPTWLSQDAVDILKAFMT  232 (320)
T ss_pred             ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC--CCCCCCCCHHHHHHHHHHcc
Confidence            3568999999999988888899999999999999999999998765444333322221  11222334779999999999


Q ss_pred             CCCCCCCCH
Q 041728           83 GNPESRLII   91 (108)
Q Consensus        83 ~~p~~Rp~~   91 (108)
                      .||.+|+++
T Consensus       233 ~dP~~R~~~  241 (320)
T cd05590         233 KNPTMRLGS  241 (320)
T ss_pred             cCHHHCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.71  E-value=5.6e-17  Score=94.26  Aligned_cols=92  Identities=24%  Similarity=0.291  Sum_probs=67.3

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||......++.++|+|++|+++|++++ |..||.+......................+ ..+.+++..||+.+
T Consensus       165 ~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~~  243 (262)
T cd05071         165 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP-ESLHDLMCQCWRKE  243 (262)
T ss_pred             ccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccC-HHHHHHHHHHccCC
Confidence            4567999999888888999999999999999998 888887654333332222211111122233 67899999999999


Q ss_pred             CCCCCCHhhH-HHHH
Q 041728           85 PESRLIITLT-DGLK   98 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~   98 (108)
                      |.+||+++++ ..++
T Consensus       244 p~~Rp~~~~~~~~l~  258 (262)
T cd05071         244 PEERPTFEYLQAFLE  258 (262)
T ss_pred             cccCCCHHHHHHHHH
Confidence            9999999998 4333

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.71  E-value=4.7e-17  Score=95.27  Aligned_cols=94  Identities=19%  Similarity=0.210  Sum_probs=67.9

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      +++.|++||......++.++|+||+|+++|++++ |..|+.................... +...+..+.+++..||..+
T Consensus       173 ~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~d  251 (279)
T cd05109         173 VPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQ-PPICTIDVYMIMVKCWMID  251 (279)
T ss_pred             cchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCC-CccCCHHHHHHHHHHcCCC
Confidence            3567999999988888999999999999999998 8888875543322221111111111 2223367899999999999


Q ss_pred             CCCCCCHhhH-HHHHHH
Q 041728           85 PESRLIITLT-DGLKRL  100 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l  100 (108)
                      |+.||++.++ ..+..+
T Consensus       252 p~~Rp~~~~l~~~l~~~  268 (279)
T cd05109         252 SECRPRFRELVDEFSRM  268 (279)
T ss_pred             hhhCcCHHHHHHHHHHh
Confidence            9999999999 555444

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.71  E-value=4.6e-17  Score=95.63  Aligned_cols=99  Identities=13%  Similarity=0.001  Sum_probs=69.9

Q ss_pred             cccccceecccccccC---CCcccccchhhhHHHHHHHhCCCCCCcchh-HHhhhhcCCCCCcCCCCC---CCchHHHHH
Q 041728            4 ILLEFMNFFEGLAYTI---KITEKYDVYSFGVLVLEVIKGKHPRDQMFF-LQFQLHLPIPLDEMLDPR---LPPDPLFDV   76 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~---~~~~~~di~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~l   76 (108)
                      ..|+..|++||.+...   .++.++|+|++|+++|++++|..||..... ..................   ..+..+.++
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  246 (288)
T cd06616         167 DAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNF  246 (288)
T ss_pred             ccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHH
Confidence            4578889999998765   578899999999999999999999875532 111111111111111111   123678999


Q ss_pred             HhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           77 AFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      +..||..+|++||++++|..+.++..
T Consensus       247 i~~~l~~~p~~Rpt~~~i~~~~~~~~  272 (288)
T cd06616         247 INLCLIKDESKRPKYKELLEHPFIKD  272 (288)
T ss_pred             HHHHccCChhhCcCHHHHhcChhhhc
Confidence            99999999999999999976666544

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.71  E-value=2.2e-17  Score=108.80  Aligned_cols=97  Identities=13%  Similarity=0.063  Sum_probs=70.6

Q ss_pred             cccccceeccccccc--CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYT--IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..||+.|+|||.+..  ..++.++||||||+++|++++|..||.....................+.. +..+.+|+..||
T Consensus       201 ~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~-S~eL~dLI~~~L  279 (1021)
T PTZ00266        201 CVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPIKGK-SKELNILIKNLL  279 (1021)
T ss_pred             cCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCC-CHHHHHHHHHHh
Confidence            468999999998864  44778999999999999999999999755433222211111111111222 367999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ..+|.+||++.+++....+.
T Consensus       280 ~~dPeeRPSa~QlL~h~~ik  299 (1021)
T PTZ00266        280 NLSAKERPSALQCLGYQIIK  299 (1021)
T ss_pred             cCChhHCcCHHHHhccHHHh
Confidence            99999999999996666654

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.71  E-value=3.1e-17  Score=97.34  Aligned_cols=97  Identities=16%  Similarity=0.130  Sum_probs=69.6

Q ss_pred             cccccceecccccc---cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAY---TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~---~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ..++..|++||.+.   ...++.++|+||+|+++|++++|..|+.....................+...+..+.+++.+|
T Consensus       171 ~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  250 (308)
T cd06634         171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSC  250 (308)
T ss_pred             ccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHH
Confidence            45788999999874   345678899999999999999999998765543333322222122222222336789999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      |..+|.+||+++++..+.++
T Consensus       251 l~~~P~~Rp~~~~ll~~~~~  270 (308)
T cd06634         251 LQKIPQDRPTSEVLLKHRFV  270 (308)
T ss_pred             hhCCcccCCCHHHHhhCccc
Confidence            99999999999998655543

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.71  E-value=5.2e-17  Score=95.18  Aligned_cols=96  Identities=16%  Similarity=0.151  Sum_probs=69.7

Q ss_pred             cccccceecccccc-----cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCC-CCCcCCCCCCCchHHHHHH
Q 041728            4 ILLEFMNFFEGLAY-----TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPI-PLDEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~~~~~~ape~~~-----~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~   77 (108)
                      ..+++.|++||.+.     ...++.++|+||+|+++|++++|..|+.............. .......+...+..+.+++
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (282)
T cd06643         163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFL  242 (282)
T ss_pred             ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHH
Confidence            45788999999874     23466789999999999999999999876654433332211 1122223333347799999


Q ss_pred             hhhcCCCCCCCCCHhhHHHHHH
Q 041728           78 FSCLNGNPESRLIITLTDGLKR   99 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~~l~~   99 (108)
                      .+||..+|.+||++.++..+..
T Consensus       243 ~~~l~~~p~~Rp~~~~il~~~~  264 (282)
T cd06643         243 KKCLEKNVDARWTTTQLLQHPF  264 (282)
T ss_pred             HHHccCChhhCcCHHHHhcCCC
Confidence            9999999999999999855443

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.71  E-value=1.3e-17  Score=99.37  Aligned_cols=95  Identities=19%  Similarity=0.121  Sum_probs=70.7

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...||+.|+|||.+.+..++.++|+||+|+++|++++|..||................  ...+.....++.+++..||.
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~  232 (316)
T cd05620         155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDT--PHYPRWITKESKDILEKLFE  232 (316)
T ss_pred             ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCCCCCHHHHHHHHHHcc
Confidence            3568999999999988889999999999999999999999998665433333222111  11122334779999999999


Q ss_pred             CCCCCCCCHh-hHHHHHH
Q 041728           83 GNPESRLIIT-LTDGLKR   99 (108)
Q Consensus        83 ~~p~~Rp~~~-~l~~l~~   99 (108)
                      .||.+|+++. ++..+.+
T Consensus       233 ~dP~~R~~~~~~~~~h~~  250 (316)
T cd05620         233 RDPTRRLGVVGNIRGHPF  250 (316)
T ss_pred             CCHHHcCCChHHHHcCCC
Confidence            9999999974 5544433

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.71  E-value=5.5e-17  Score=93.66  Aligned_cols=87  Identities=20%  Similarity=0.263  Sum_probs=64.6

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCCC
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNP   85 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p   85 (108)
                      +..|++||.+....++.++|+|++|+++|++++ |..|+................. ...+...+..+.+++.+||+.+|
T Consensus       159 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p  237 (252)
T cd05084         159 PVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVR-LPCPELCPDAVYRLMERCWEYDP  237 (252)
T ss_pred             ceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC-CCCcccCCHHHHHHHHHHcCCCh
Confidence            346999999988888899999999999999997 8888865543322222222111 12222334779999999999999


Q ss_pred             CCCCCHhhH
Q 041728           86 ESRLIITLT   94 (108)
Q Consensus        86 ~~Rp~~~~l   94 (108)
                      ++||+++++
T Consensus       238 ~~Rps~~~~  246 (252)
T cd05084         238 GQRPSFSTV  246 (252)
T ss_pred             hhCcCHHHH
Confidence            999999999

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.71  E-value=2.6e-17  Score=99.33  Aligned_cols=98  Identities=13%  Similarity=0.033  Sum_probs=67.8

Q ss_pred             cccccceeccccccc----CC-CcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---hcCCCCCcCCCCCCCchHHHH
Q 041728            4 ILLEFMNFFEGLAYT----IK-ITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---HLPIPLDEMLDPRLPPDPLFD   75 (108)
Q Consensus         4 ~~~~~~~~ape~~~~----~~-~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   75 (108)
                      ..|+..|++||.+..    .. .+.++|||++|+++|++++|+.||.......+..   ............. ...++.+
T Consensus       228 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~  306 (353)
T PLN00034        228 SVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPAT-ASREFRH  306 (353)
T ss_pred             cccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCc-cCHHHHH
Confidence            468999999998753    22 3458999999999999999999986332111111   1111111111122 2367999


Q ss_pred             HHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ++..||..+|++||++.+++.+.++..
T Consensus       307 li~~~l~~~P~~Rpt~~ell~hp~~~~  333 (353)
T PLN00034        307 FISCCLQREPAKRWSAMQLLQHPFILR  333 (353)
T ss_pred             HHHHHccCChhhCcCHHHHhcCccccc
Confidence            999999999999999999977766654

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.71  E-value=7.9e-17  Score=93.48  Aligned_cols=91  Identities=23%  Similarity=0.332  Sum_probs=67.6

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCCC
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNP   85 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p   85 (108)
                      +..|++||.+....++.++|+||+|++++++++ |..|+.+.............. ....+...+..+.+++.+||..+|
T Consensus       167 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P  245 (261)
T cd05068         167 PIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY-RMPCPPGCPKELYDIMLDCWKEDP  245 (261)
T ss_pred             ceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCcCCHHHHHHHHHHhhcCc
Confidence            347999999888888899999999999999998 999987665443333222221 111122233779999999999999


Q ss_pred             CCCCCHhhH-HHHH
Q 041728           86 ESRLIITLT-DGLK   98 (108)
Q Consensus        86 ~~Rp~~~~l-~~l~   98 (108)
                      .+||+++++ ..|+
T Consensus       246 ~~Rp~~~~l~~~l~  259 (261)
T cd05068         246 DDRPTFETLQWKLE  259 (261)
T ss_pred             ccCCCHHHHHHHHh
Confidence            999999999 4443

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.71  E-value=8.8e-18  Score=98.74  Aligned_cols=94  Identities=12%  Similarity=0.085  Sum_probs=66.9

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcC--------CCCC-------cC----
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP--------IPLD-------EM----   63 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-------~~----   63 (108)
                      ...|++.|+|||.+....++.++|+||+|+++|++++|..||.+.........+.        ....       ..    
T Consensus       168 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (290)
T cd07862         168 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSK  247 (290)
T ss_pred             cccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCC
Confidence            3468899999999988888899999999999999999999987554322111000        0000       00    


Q ss_pred             -------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHH
Q 041728           64 -------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        64 -------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                             ..+.. +..+.+++..|++.+|++||++.+++.+
T Consensus       248 ~~~~~~~~~~~~-~~~~~~li~~~l~~~P~~R~s~~~~l~h  287 (290)
T cd07862         248 SAQPIEKFVTDI-DELGKDLLLKCLTFNPAKRISAYSALSH  287 (290)
T ss_pred             CCCCHHHHccCC-CHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence                   00122 2457899999999999999999998543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.71  E-value=1.2e-17  Score=103.33  Aligned_cols=99  Identities=16%  Similarity=0.141  Sum_probs=70.6

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CCC----------------CCc
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PIP----------------LDE   62 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----------------~~~   62 (108)
                      ..||+.|+|||.+.+ ..++.++|+||+|+++|++++|..||.+..........    ...                ...
T Consensus       230 ~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~  309 (440)
T PTZ00036        230 YICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPD  309 (440)
T ss_pred             CCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCc
Confidence            467899999998865 46889999999999999999999999765432211100    000                000


Q ss_pred             -------CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           63 -------MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        63 -------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                             ...|...+.++.+|+.+||+.+|.+|+++.+++.+.++..
T Consensus       310 ~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~  356 (440)
T PTZ00036        310 VKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDD  356 (440)
T ss_pred             cCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence                   0011122367899999999999999999999977777654

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.70  E-value=1.3e-17  Score=99.31  Aligned_cols=93  Identities=18%  Similarity=0.136  Sum_probs=70.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..||+.|+|||.+.+..++.++|+||+|+++|++++|..||...............  ....+......+.+++.+||..
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~  233 (316)
T cd05619         156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD--NPCYPRWLTREAKDILVKLFVR  233 (316)
T ss_pred             ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCccCCHHHHHHHHHHhcc
Confidence            46889999999998888899999999999999999999999766543333322211  1112223347789999999999


Q ss_pred             CCCCCCCHh-hHHHHH
Q 041728           84 NPESRLIIT-LTDGLK   98 (108)
Q Consensus        84 ~p~~Rp~~~-~l~~l~   98 (108)
                      +|.+|+++. ++..+.
T Consensus       234 ~P~~R~~~~~~l~~h~  249 (316)
T cd05619         234 EPERRLGVKGDIRQHP  249 (316)
T ss_pred             CHhhcCCChHHHHcCc
Confidence            999999986 554433

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=2.6e-17  Score=97.81  Aligned_cols=98  Identities=11%  Similarity=-0.018  Sum_probs=71.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      +.|+..|++||.+....++.++|+||+|+++|++++|..||.+.......................+..+.+++..||..
T Consensus       192 ~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  271 (316)
T cd05574         192 FVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVK  271 (316)
T ss_pred             CcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccC
Confidence            46788999999998888888999999999999999999999765533322211111111111111347799999999999


Q ss_pred             CCCCCCC----HhhHHHHHHHH
Q 041728           84 NPESRLI----ITLTDGLKRLA  101 (108)
Q Consensus        84 ~p~~Rp~----~~~l~~l~~l~  101 (108)
                      +|++||+    +.+++.+.++.
T Consensus       272 ~p~~R~s~~~~~~~ll~~~~~~  293 (316)
T cd05574         272 DPSKRLGSKRGAAEIKQHPFFR  293 (316)
T ss_pred             CHhHCCCchhhHHHHHcCchhh
Confidence            9999999    88886555543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.70  E-value=3.3e-17  Score=94.94  Aligned_cols=89  Identities=22%  Similarity=0.338  Sum_probs=66.8

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||......++.++|+||+|+++|++++ |..|+................. ...+...+..+.+++..||..+
T Consensus       163 ~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~  241 (256)
T cd05113         163 FPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLR-LYRPHLASEKVYAIMYSCWHEK  241 (256)
T ss_pred             cChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHHcCCC
Confidence            4567999999987788899999999999999998 8889876544333232222211 1122333477999999999999


Q ss_pred             CCCCCCHhhHH
Q 041728           85 PESRLIITLTD   95 (108)
Q Consensus        85 p~~Rp~~~~l~   95 (108)
                      |.+||++.+|+
T Consensus       242 p~~Rp~~~~ll  252 (256)
T cd05113         242 AEERPTFQQLL  252 (256)
T ss_pred             cccCCCHHHHH
Confidence            99999999983

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.70  E-value=1.3e-17  Score=99.73  Aligned_cols=94  Identities=14%  Similarity=0.004  Sum_probs=71.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|+|||.+....++.++|+||+|+++|++++|..||.+.........+.....  ..+...+..+.+++.+||+.
T Consensus       175 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~L~~  252 (329)
T PTZ00263        175 LCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRL--KFPNWFDGRARDLVKGLLQT  252 (329)
T ss_pred             ecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCc--CCCCCCCHHHHHHHHHHhhc
Confidence            5689999999999888888999999999999999999999987655444333322211  12333346799999999999


Q ss_pred             CCCCCCC-----HhhHHHHHH
Q 041728           84 NPESRLI-----ITLTDGLKR   99 (108)
Q Consensus        84 ~p~~Rp~-----~~~l~~l~~   99 (108)
                      ||.+|++     ++++..+.+
T Consensus       253 dP~~R~~~~~~~~~~ll~hp~  273 (329)
T PTZ00263        253 DHTKRLGTLKGGVADVKNHPY  273 (329)
T ss_pred             CHHHcCCCCCCCHHHHhcCCc
Confidence            9999987     566644443

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.70  E-value=3.8e-17  Score=96.21  Aligned_cols=98  Identities=13%  Similarity=0.135  Sum_probs=69.7

Q ss_pred             cccccceecccccc-----cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC-CCcCCCCCCCchHHHHHH
Q 041728            4 ILLEFMNFFEGLAY-----TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP-LDEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~~~~~~ape~~~-----~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~   77 (108)
                      ..+++.|++||.+.     ...++.++|+||+|+++|++++|..|+............... ......+......+.+++
T Consensus       170 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  249 (292)
T cd06644         170 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFL  249 (292)
T ss_pred             ecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHH
Confidence            35778899999874     244677899999999999999999998765543333222111 112222222336789999


Q ss_pred             hhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           78 FSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .+||..+|++||++++++.++++.
T Consensus       250 ~~~l~~~p~~Rp~~~~il~~~~~~  273 (292)
T cd06644         250 KTALDKHPETRPSAAQLLEHPFVS  273 (292)
T ss_pred             HHHhcCCcccCcCHHHHhcCcccc
Confidence            999999999999999996655553

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.70  E-value=5.9e-17  Score=91.40  Aligned_cols=99  Identities=16%  Similarity=0.104  Sum_probs=82.9

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ++.|||.-|++||++.+..++..+|+|++|+++|+++.|.+||.+......+..+...  +...|...+....+++.+|+
T Consensus       180 ~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~--~~~~p~~is~~a~dlI~~ll  257 (281)
T KOG0580|consen  180 KTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV--DLKFPSTISGGAADLISRLL  257 (281)
T ss_pred             eeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc--cccCCcccChhHHHHHHHHh
Confidence            5789999999999999999999999999999999999999999988755555543332  33334444588999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ..+|.+|....++..+.+|..
T Consensus       258 ~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  258 VKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             ccCccccccHHHHhhhHHHHh
Confidence            999999999999988888764

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.70  E-value=1.4e-17  Score=99.30  Aligned_cols=93  Identities=14%  Similarity=0.109  Sum_probs=70.7

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|+|||.+....++.++|+||+|+++|++++|..||...............  ....+...+.++.+++.+||..
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~ll~~~L~~  233 (321)
T cd05591         156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD--DVLYPVWLSKEAVSILKAFMTK  233 (321)
T ss_pred             cccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhcc
Confidence            46899999999998888899999999999999999999999876644443322221  1122333347799999999999


Q ss_pred             CCCCCC-------CHhhHHHHH
Q 041728           84 NPESRL-------IITLTDGLK   98 (108)
Q Consensus        84 ~p~~Rp-------~~~~l~~l~   98 (108)
                      +|.+|+       ++.++..+.
T Consensus       234 dp~~R~~~~~~~~~~~~~~~hp  255 (321)
T cd05591         234 NPNKRLGCVASQGGEDAIKQHP  255 (321)
T ss_pred             CHHHcCCCCCCCCCHHHHhcCC
Confidence            999999       666664443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.70  E-value=2.5e-17  Score=98.59  Aligned_cols=98  Identities=14%  Similarity=0.010  Sum_probs=68.6

Q ss_pred             cccccceeccccccc--CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---------------h-----------
Q 041728            4 ILLEFMNFFEGLAYT--IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---------------H-----------   55 (108)
Q Consensus         4 ~~~~~~~~ape~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---------------~-----------   55 (108)
                      ..|++.|+|||.+..  ..++.++|+||+|+++|++++|+.||.+........               .           
T Consensus       166 ~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  245 (338)
T cd07859         166 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLS  245 (338)
T ss_pred             CCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHH
Confidence            468899999998765  567889999999999999999999986543211100               0           


Q ss_pred             -cCCCCCcC---CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           56 -LPIPLDEM---LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        56 -~~~~~~~~---~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                       ........   ..+..+ ..+.+++.+||..+|++||++++++.+.++..
T Consensus       246 ~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~  295 (338)
T cd07859         246 SMRKKQPVPFSQKFPNAD-PLALRLLERLLAFDPKDRPTAEEALADPYFKG  295 (338)
T ss_pred             hhcccCCCchHHhcCCCC-hHHHHHHHHHcCcCcccCCCHHHHhcCchhhh
Confidence             00000000   011222 55789999999999999999999976666543

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=3.1e-17  Score=96.03  Aligned_cols=99  Identities=14%  Similarity=0.144  Sum_probs=72.7

Q ss_pred             cccccceecccccc-----cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCC-CcCCCCCCCchHHHHHH
Q 041728            4 ILLEFMNFFEGLAY-----TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPL-DEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~~~~~~ape~~~-----~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~   77 (108)
                      ..+++.|++||.+.     ...++.++|+|++|+++|++++|..|+................ .....+...+..+.+++
T Consensus       163 ~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (280)
T cd06611         163 FIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFL  242 (280)
T ss_pred             eecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHH
Confidence            45788999999874     2346678999999999999999999998765544333222221 12222333347799999


Q ss_pred             hhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           78 FSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ..||..+|.+||++.+++.+.++..
T Consensus       243 ~~~l~~~p~~Rps~~~il~~~~~~~  267 (280)
T cd06611         243 KSCLVKDPDDRPTAAELLKHPFVSD  267 (280)
T ss_pred             HHHhccChhhCcCHHHHhcChhhcc
Confidence            9999999999999999976666654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.70  E-value=3.5e-17  Score=95.09  Aligned_cols=94  Identities=19%  Similarity=0.117  Sum_probs=69.5

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCC--CCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPI--PLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..|+..|++||.+....++.++|+|++|++++++++|..||..............  ......... .+..+.+++..||
T Consensus       168 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~l  246 (265)
T cd06631         168 MHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDS-FSAAAIDFVTSCL  246 (265)
T ss_pred             cCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCC-CCHHHHHHHHHHh
Confidence            4577889999999888888999999999999999999999976543332221111  111122222 2367999999999


Q ss_pred             CCCCCCCCCHhhHHHHH
Q 041728           82 NGNPESRLIITLTDGLK   98 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~   98 (108)
                      ..+|.+||++.++..++
T Consensus       247 ~~~p~~Rp~~~~~l~~~  263 (265)
T cd06631         247 TRDQHERPSALQLLRHD  263 (265)
T ss_pred             cCCcccCCCHHHHhcCC
Confidence            99999999999985443

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.70  E-value=6.3e-17  Score=93.88  Aligned_cols=89  Identities=21%  Similarity=0.282  Sum_probs=66.7

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||......++.++|+|++|+++|++++ |..|+.+................ ..+...+..+.+++..||..+
T Consensus       165 ~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~  243 (260)
T cd05069         165 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRM-PCPQGCPESLHELMKLCWKKD  243 (260)
T ss_pred             cchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-CCCcccCHHHHHHHHHHccCC
Confidence            4567999999888888899999999999999998 88898765543333322222111 112223377999999999999


Q ss_pred             CCCCCCHhhHH
Q 041728           85 PESRLIITLTD   95 (108)
Q Consensus        85 p~~Rp~~~~l~   95 (108)
                      |.+||++++|.
T Consensus       244 p~~Rp~~~~i~  254 (260)
T cd05069         244 PDERPTFEYIQ  254 (260)
T ss_pred             cccCcCHHHHH
Confidence            99999999883

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.70  E-value=7.4e-17  Score=93.00  Aligned_cols=88  Identities=19%  Similarity=0.236  Sum_probs=65.7

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+....++.++|+||+|+++|++++ |..||.......................+ +..+.+++.+||..+
T Consensus       156 ~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~~  234 (250)
T cd05085         156 IPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKC-PDDVYKVMQRCWDYK  234 (250)
T ss_pred             CcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCC-CHHHHHHHHHHcccC
Confidence            3556999999988888889999999999999998 88898765443332222222111112223 377999999999999


Q ss_pred             CCCCCCHhhH
Q 041728           85 PESRLIITLT   94 (108)
Q Consensus        85 p~~Rp~~~~l   94 (108)
                      |++||++.++
T Consensus       235 p~~Rp~~~~l  244 (250)
T cd05085         235 PENRPKFSEL  244 (250)
T ss_pred             cccCCCHHHH
Confidence            9999999998

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=1.7e-17  Score=97.79  Aligned_cols=95  Identities=14%  Similarity=-0.007  Sum_probs=71.5

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|+|||.+....++.++|+||+|+++|++++|..||.+................  .+...+..+.+++.+||..
T Consensus       158 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~li~~~l~~  235 (291)
T cd05612         158 LCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLE--FPRHLDLYAKDLIKKLLVV  235 (291)
T ss_pred             ccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcC--CCccCCHHHHHHHHHHcCC
Confidence            46899999999998888889999999999999999999999876544433322222111  1222246799999999999


Q ss_pred             CCCCCCC-----HhhHHHHHHH
Q 041728           84 NPESRLI-----ITLTDGLKRL  100 (108)
Q Consensus        84 ~p~~Rp~-----~~~l~~l~~l  100 (108)
                      ||.+|++     ++++..+.++
T Consensus       236 dp~~R~~~~~~~~~~~l~h~~~  257 (291)
T cd05612         236 DRTRRLGNMKNGADDVKNHRWF  257 (291)
T ss_pred             CHHHccCCccCCHHHHhcCccc
Confidence            9999995     7777555544

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.70  E-value=3.6e-17  Score=95.83  Aligned_cols=98  Identities=12%  Similarity=0.061  Sum_probs=70.1

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH-------HhhhhcC-CCCCcCCCCCCCchHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL-------QFQLHLP-IPLDEMLDPRLPPDPLF   74 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~   74 (108)
                      ...|+..|++||.+....++.++|+|++|+++|++++|..||......       ....... .......... .+..+.
T Consensus       152 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  230 (279)
T cd06619         152 TYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQ-FSEKFV  230 (279)
T ss_pred             CCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCc-CCHHHH
Confidence            356889999999998888889999999999999999999998643211       1111111 1111111122 236689


Q ss_pred             HHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           75 DVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        75 ~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      +++.+||+.+|++||+++++..+.++.
T Consensus       231 ~li~~~l~~~P~~Rp~~~eil~~~~~~  257 (279)
T cd06619         231 HFITQCMRKQPKERPAPENLMDHPFIV  257 (279)
T ss_pred             HHHHHHhhCChhhCCCHHHHhcCcccc
Confidence            999999999999999999986665543

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.70  E-value=2.4e-17  Score=98.41  Aligned_cols=87  Identities=18%  Similarity=0.091  Sum_probs=66.0

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...|++.|+|||.+.+..++.++|+||+|+++|++++|..||.+...............  ..+...+..+.+++.+||.
T Consensus       160 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~L~  237 (324)
T cd05589         160 TFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV--RYPRFLSREAISIMRRLLR  237 (324)
T ss_pred             ccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHhh
Confidence            35689999999999888889999999999999999999999986654433332222111  1222234778999999999


Q ss_pred             CCCCCCCCH
Q 041728           83 GNPESRLII   91 (108)
Q Consensus        83 ~~p~~Rp~~   91 (108)
                      .||.+||+.
T Consensus       238 ~dP~~R~~~  246 (324)
T cd05589         238 RNPERRLGS  246 (324)
T ss_pred             cCHhHcCCC
Confidence            999999953

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.70  E-value=1.1e-16  Score=92.95  Aligned_cols=97  Identities=18%  Similarity=0.118  Sum_probs=68.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch--hHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF--FLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..++..|++||.+.+..++.++|+|++|+++|++++|..|+....  .....................+..+.+++.+||
T Consensus       166 ~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl  245 (267)
T cd08224         166 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCI  245 (267)
T ss_pred             ecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHc
Confidence            457788999999888888899999999999999999999985432  111111111111111111122367999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l  100 (108)
                      ..+|++||++.+| ..+..+
T Consensus       246 ~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         246 NPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             CCCcccCCCHHHHHHHHHHh
Confidence            9999999999998 555443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.70  E-value=1.1e-16  Score=95.89  Aligned_cols=95  Identities=20%  Similarity=0.242  Sum_probs=70.2

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCCC
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNP   85 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p   85 (108)
                      +..|++||.+....++.++|+|++|+++|++++ |..||.+.................. +.....++.+++..||+.+|
T Consensus       199 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~~p  277 (334)
T cd05100         199 PVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK-PANCTHELYMIMRECWHAVP  277 (334)
T ss_pred             CceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcccCh
Confidence            457999999988888899999999999999998 8888876554333332222211111 22223679999999999999


Q ss_pred             CCCCCHhhH-HHHHHHHH
Q 041728           86 ESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        86 ~~Rp~~~~l-~~l~~l~~  102 (108)
                      .+||++.++ ..+..+..
T Consensus       278 ~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         278 SQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             hhCcCHHHHHHHHHHHhh
Confidence            999999999 66666653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.70  E-value=1e-16  Score=93.82  Aligned_cols=98  Identities=18%  Similarity=0.260  Sum_probs=73.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..++..|++||.+....++.++|+|++|+++|++++|..|+........................ +..+.+++..||+.
T Consensus       161 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~l~~  239 (277)
T cd06641         161 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNY-SKPLKEFVEACLNK  239 (277)
T ss_pred             ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCccc-CHHHHHHHHHHccC
Confidence            35778899999988777888999999999999999999998765543333322222222222223 36699999999999


Q ss_pred             CCCCCCCHhhHHHHHHHHH
Q 041728           84 NPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l~~l~~  102 (108)
                      +|.+||++.++..+.++..
T Consensus       240 ~p~~Rp~~~~~l~~~~~~~  258 (277)
T cd06641         240 EPSFRPTAKELLKHKFIVR  258 (277)
T ss_pred             ChhhCcCHHHHHhCHHHhh
Confidence            9999999999976666643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.70  E-value=6.2e-17  Score=95.13  Aligned_cols=91  Identities=16%  Similarity=0.165  Sum_probs=66.6

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+....++.++|+||+|+++|++++ |..|+.+..................... .+..+.+++..||+.+
T Consensus       194 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~l~~~  272 (288)
T cd05050         194 IPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDN-CPLELYNLMRLCWSKL  272 (288)
T ss_pred             cChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHHcccC
Confidence            4556999999887888899999999999999997 7778866544443332222211111222 2367999999999999


Q ss_pred             CCCCCCHhhH-HHH
Q 041728           85 PESRLIITLT-DGL   97 (108)
Q Consensus        85 p~~Rp~~~~l-~~l   97 (108)
                      |.+||++.++ ..|
T Consensus       273 p~~Rpt~~el~~~l  286 (288)
T cd05050         273 PSDRPSFASINRIL  286 (288)
T ss_pred             cccCCCHHHHHHHh
Confidence            9999999998 434

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.70  E-value=2.7e-17  Score=96.67  Aligned_cols=98  Identities=16%  Similarity=0.115  Sum_probs=72.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCC-CcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPL-DEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..|+..|++||......++.++|+|++|++++++++|..|+................ .....+...+..+.+++.+||.
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  254 (285)
T cd06648         175 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLV  254 (285)
T ss_pred             ccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcc
Confidence            357889999999887788899999999999999999999987655443333222111 1111121123679999999999


Q ss_pred             CCCCCCCCHhhHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .+|.+||++.+++.++++.
T Consensus       255 ~~p~~Rpt~~~il~~~~~~  273 (285)
T cd06648         255 RDPAQRATAAELLNHPFLA  273 (285)
T ss_pred             cChhhCcCHHHHccCcccc
Confidence            9999999999996655553

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.70  E-value=3.1e-17  Score=97.94  Aligned_cols=93  Identities=17%  Similarity=0.096  Sum_probs=70.4

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|+|||.+....++.++|+||+|+++|++++|..||.................. ..+.+ ...+.+++.+||..
T Consensus       160 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~li~~~l~~  237 (323)
T cd05584         160 FCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLN-LPPYL-TPEARDLLKKLLKR  237 (323)
T ss_pred             cCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-CCCCC-CHHHHHHHHHHccc
Confidence            46899999999998888889999999999999999999999876544433322222111 12223 36799999999999


Q ss_pred             CCCCCC-----CHhhHHHHH
Q 041728           84 NPESRL-----IITLTDGLK   98 (108)
Q Consensus        84 ~p~~Rp-----~~~~l~~l~   98 (108)
                      +|.+|+     ++.++..+.
T Consensus       238 ~p~~R~~~~~~~~~~l~~h~  257 (323)
T cd05584         238 NPSSRLGAGPGDAAEVQSHP  257 (323)
T ss_pred             CHhHcCCCCCCCHHHHhcCC
Confidence            999999     677764443

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.70  E-value=5e-17  Score=94.00  Aligned_cols=92  Identities=16%  Similarity=0.141  Sum_probs=69.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|++||.+.+..++.++|+|++|+++|++++|..|+.....................+.. +..+.+++..||..
T Consensus       161 ~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~l~~  239 (256)
T cd08221         161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVY-SSELISLVHSLLQQ  239 (256)
T ss_pred             cCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCcccc-CHHHHHHHHHHccc
Confidence            45788999999988777888999999999999999999998765544433322222222222223 36799999999999


Q ss_pred             CCCCCCCHhhHHH
Q 041728           84 NPESRLIITLTDG   96 (108)
Q Consensus        84 ~p~~Rp~~~~l~~   96 (108)
                      +|.+||++++++.
T Consensus       240 ~p~~R~s~~~ll~  252 (256)
T cd08221         240 DPEKRPTADEVLD  252 (256)
T ss_pred             CcccCCCHHHHhh
Confidence            9999999999843

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.70  E-value=5.7e-17  Score=95.17  Aligned_cols=98  Identities=16%  Similarity=0.142  Sum_probs=73.1

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc-CCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL-PIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .++..|++||.+....++.++|+|++|+++|++++|..|+............ .........+...+..+.+++..||+.
T Consensus       177 ~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  256 (286)
T cd06614         177 VGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVK  256 (286)
T ss_pred             cCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhcc
Confidence            4677899999988777889999999999999999999998766544332221 111122222222336799999999999


Q ss_pred             CCCCCCCHhhHHHHHHHHH
Q 041728           84 NPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l~~l~~  102 (108)
                      +|..||++.+++....+..
T Consensus       257 ~p~~Rpt~~~il~~~~~~~  275 (286)
T cd06614         257 DPEKRPSAEELLQHPFLKK  275 (286)
T ss_pred             ChhhCcCHHHHhhChHhhc
Confidence            9999999999976666655

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.70  E-value=2.4e-17  Score=98.20  Aligned_cols=93  Identities=18%  Similarity=0.084  Sum_probs=69.7

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+||+.|+|||.+.+..++.++|+||+|+++|++++|..||.+............. .. ..+...+..+.+++..||.
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~-~~-~~~~~~~~~~~~ll~~~l~  232 (316)
T cd05592         155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND-RP-HFPRWISKEAKDCLSKLFE  232 (316)
T ss_pred             cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-CC-CCCCCCCHHHHHHHHHHcc
Confidence            356899999999998888899999999999999999999999866543333322221 11 1223334779999999999


Q ss_pred             CCCCCCCCHh-hHHHH
Q 041728           83 GNPESRLIIT-LTDGL   97 (108)
Q Consensus        83 ~~p~~Rp~~~-~l~~l   97 (108)
                      .+|.+|+++. ++..+
T Consensus       233 ~~P~~R~~~~~~l~~h  248 (316)
T cd05592         233 RDPTKRLGVDGDIRQH  248 (316)
T ss_pred             CCHHHcCCChHHHHcC
Confidence            9999999875 45443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.70  E-value=4.5e-17  Score=98.46  Aligned_cols=99  Identities=12%  Similarity=0.092  Sum_probs=70.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh-----------------------hcCCC-
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL-----------------------HLPIP-   59 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~-   59 (108)
                      ..||+.|+|||.+.+..++.++|+||+|+++|++++|..||.+........                       ..... 
T Consensus       182 ~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (359)
T cd07876         182 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRP  261 (359)
T ss_pred             CcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCC
Confidence            467889999999988889999999999999999999999997543211100                       00000 


Q ss_pred             C-C---------cCC------CCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           60 L-D---------EML------DPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        60 ~-~---------~~~------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      . .         ...      ........+.+++.+||..||++||++.+++.+.++..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         262 QYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             CCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence            0 0         000      00112256889999999999999999999977777653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=3.6e-17  Score=97.23  Aligned_cols=86  Identities=17%  Similarity=0.081  Sum_probs=65.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..||+.|+|||.+.+..++.++|+||+|+++|++++|..||..................  .+...+..+.+++.+||..
T Consensus       153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~  230 (312)
T cd05585         153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLR--FPDGFDRDAKDLLIGLLSR  230 (312)
T ss_pred             ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCC--CCCcCCHHHHHHHHHHcCC
Confidence            56899999999998888999999999999999999999999765544333322222111  1222337799999999999


Q ss_pred             CCCCCCCH
Q 041728           84 NPESRLII   91 (108)
Q Consensus        84 ~p~~Rp~~   91 (108)
                      ||.+|+++
T Consensus       231 dp~~R~~~  238 (312)
T cd05585         231 DPTRRLGY  238 (312)
T ss_pred             CHHHcCCC
Confidence            99999864

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.70  E-value=8.4e-18  Score=103.16  Aligned_cols=96  Identities=16%  Similarity=0.034  Sum_probs=72.7

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC---CCcCCCCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP---LDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~   79 (108)
                      +.+|||-|||||++.+..|...+|+||+||++||++.|.+||.+..+..+...+..-   +....+..+ .++..+|+.+
T Consensus       347 StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~-s~eA~DLI~r  425 (550)
T KOG0605|consen  347 STVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDL-SDEAKDLITR  425 (550)
T ss_pred             cccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcc-cHHHHHHHHH
Confidence            478999999999999999999999999999999999999999988766554432221   122222222 3789999999


Q ss_pred             hcCCCCCCCCC---HhhHHHHHHH
Q 041728           80 CLNGNPESRLI---ITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~---~~~l~~l~~l  100 (108)
                      |+. ||+.|..   +.||..+.+.
T Consensus       426 ll~-d~~~RLG~~G~~EIK~HPfF  448 (550)
T KOG0605|consen  426 LLC-DPENRLGSKGAEEIKKHPFF  448 (550)
T ss_pred             Hhc-CHHHhcCcccHHHHhcCCcc
Confidence            998 9999975   5666444443

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.70  E-value=6.4e-17  Score=94.90  Aligned_cols=94  Identities=16%  Similarity=0.198  Sum_probs=68.1

Q ss_pred             cccccceeccccccc-----CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC-CCcCCCCCCCchHHHHHH
Q 041728            4 ILLEFMNFFEGLAYT-----IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP-LDEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~   77 (108)
                      ..|++.|+|||.+..     ..++.++|+||+|+++|++++|..|+............... ......+......+.+++
T Consensus       184 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  263 (286)
T cd06638         184 SVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFI  263 (286)
T ss_pred             ccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHH
Confidence            457889999998753     34678899999999999999999998766543332221111 112223333346799999


Q ss_pred             hhhcCCCCCCCCCHhhHHHH
Q 041728           78 FSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~~l   97 (108)
                      .+||+.+|++||++.+++..
T Consensus       264 ~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         264 RKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             HHHccCCcccCCCHHHHhhc
Confidence            99999999999999998543

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.70  E-value=1.3e-16  Score=94.59  Aligned_cols=94  Identities=23%  Similarity=0.297  Sum_probs=68.1

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+....++.++|+||+|++++++++ |..||................ ....+...+..+.+++.+||..+
T Consensus       185 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~  263 (303)
T cd05088         185 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-RLEKPLNCDDEVYDLMRQCWREK  263 (303)
T ss_pred             CcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC-cCCCCCCCCHHHHHHHHHHcCCC
Confidence            3557999998877778889999999999999998 999987554333322222211 11112222367899999999999


Q ss_pred             CCCCCCHhhH-HHHHHH
Q 041728           85 PESRLIITLT-DGLKRL  100 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l  100 (108)
                      |++||+++++ ..+..+
T Consensus       264 p~~Rp~~~~il~~l~~~  280 (303)
T cd05088         264 PYERPSFAQILVSLNRM  280 (303)
T ss_pred             hhhCcCHHHHHHHHHHH
Confidence            9999999998 555544

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.70  E-value=7e-17  Score=93.51  Aligned_cols=88  Identities=24%  Similarity=0.383  Sum_probs=66.3

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCCC
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNP   85 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p   85 (108)
                      +..|++||.+....++.++|+||+|+++|++++ |..|+................ ....+...+..+.+++.+||..+|
T Consensus       164 ~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p  242 (256)
T cd05059         164 PVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGY-RLYRPKLAPTEVYTIMYSCWHEKP  242 (256)
T ss_pred             CccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHhcCCh
Confidence            346999999988888899999999999999998 788887654443333222221 112223344789999999999999


Q ss_pred             CCCCCHhhHH
Q 041728           86 ESRLIITLTD   95 (108)
Q Consensus        86 ~~Rp~~~~l~   95 (108)
                      ++||++.++.
T Consensus       243 ~~Rpt~~~~l  252 (256)
T cd05059         243 EDRPAFKKLL  252 (256)
T ss_pred             hhCcCHHHHH
Confidence            9999999983

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.70  E-value=3.8e-17  Score=96.43  Aligned_cols=89  Identities=12%  Similarity=-0.089  Sum_probs=67.7

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHH---------hhhhcCCCCCcCCCCCCCchHHH
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ---------FQLHLPIPLDEMLDPRLPPDPLF   74 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~   74 (108)
                      ..||+.|+|||...+..++.++|+||+|++++++++|..||.+.....         ........  ....+.. +..+.
T Consensus       193 ~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~  269 (294)
T PHA02882        193 HRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEG--KIKIKNA-NKFIY  269 (294)
T ss_pred             cCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhh--hhccCCC-CHHHH
Confidence            468999999999888889999999999999999999999997663111         11111111  1112222 37799


Q ss_pred             HHHhhhcCCCCCCCCCHhhHH
Q 041728           75 DVAFSCLNGNPESRLIITLTD   95 (108)
Q Consensus        75 ~l~~~c~~~~p~~Rp~~~~l~   95 (108)
                      +++..||..+|++||+++++.
T Consensus       270 ~~~~~~~~~~~~~rp~~~~l~  290 (294)
T PHA02882        270 DFIECVTKLSYEEKPDYDALI  290 (294)
T ss_pred             HHHHHHHhCCCCCCCCHHHHH
Confidence            999999999999999999984

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.70  E-value=5.8e-17  Score=95.37  Aligned_cols=96  Identities=17%  Similarity=0.129  Sum_probs=68.5

Q ss_pred             cccccceecccccccC-----CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC-CCcCCCCCCCchHHHHHH
Q 041728            4 ILLEFMNFFEGLAYTI-----KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP-LDEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-----~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~   77 (108)
                      ..|+..|++||.+...     .++.++|+||+|+++|++++|..|+............... ......+......+.+++
T Consensus       188 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  267 (291)
T cd06639         188 SVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFI  267 (291)
T ss_pred             ccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHH
Confidence            4577889999987543     2578899999999999999999998766544333322211 112222222235689999


Q ss_pred             hhhcCCCCCCCCCHhhHHHHHH
Q 041728           78 FSCLNGNPESRLIITLTDGLKR   99 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~~l~~   99 (108)
                      .+||+.+|++||++.++..+.+
T Consensus       268 ~~~l~~~p~~Rps~~~il~~~~  289 (291)
T cd06639         268 SQCLIKDFEARPSVTHLLEHPF  289 (291)
T ss_pred             HHHhhcChhhCcCHHHHhcCcc
Confidence            9999999999999999865443

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.70  E-value=9.2e-17  Score=93.20  Aligned_cols=92  Identities=22%  Similarity=0.292  Sum_probs=67.3

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+....++.++|+|++|++++++++ |..||.+...................... +..+.+++.+||..+
T Consensus       165 ~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~l~~~  243 (260)
T cd05073         165 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC-PEELYNIMMRCWKNR  243 (260)
T ss_pred             ccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccC-CHHHHHHHHHHcccC
Confidence            4567999999987788889999999999999998 89898765443332222222111112223 367999999999999


Q ss_pred             CCCCCCHhhH-HHHH
Q 041728           85 PESRLIITLT-DGLK   98 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~   98 (108)
                      |++||+++++ ..|+
T Consensus       244 p~~Rp~~~~l~~~L~  258 (260)
T cd05073         244 PEERPTFEYIQSVLD  258 (260)
T ss_pred             cccCcCHHHHHHHHh
Confidence            9999999998 4443

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.70  E-value=2.5e-17  Score=97.29  Aligned_cols=98  Identities=15%  Similarity=0.122  Sum_probs=72.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcC-CCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP-IPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+++.|++||.+....++.++|+|++|+++|++++|..||............. ........+...+..+.+++.+||.
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  254 (297)
T cd06656         175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLE  254 (297)
T ss_pred             ccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHcc
Confidence            457788999999988788889999999999999999999997654332222111 1111222222333668899999999


Q ss_pred             CCCCCCCCHhhHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .+|.+||++.+++.++++.
T Consensus       255 ~~p~~Rps~~~il~~~~~~  273 (297)
T cd06656         255 MDVDRRGSAKELLQHPFLK  273 (297)
T ss_pred             CChhhCcCHHHHhcCchhc
Confidence            9999999999997666654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.69  E-value=9.9e-17  Score=92.70  Aligned_cols=90  Identities=26%  Similarity=0.309  Sum_probs=68.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..++..|++||.+....++.++|+|++|++++++++ |..||................ ....+...+..+.+++..||.
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~  245 (262)
T cd00192         167 GKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGY-RLPKPEYCPDELYELMLSCWQ  245 (262)
T ss_pred             CCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCCCCccCChHHHHHHHHHcc
Confidence            456788999999887788899999999999999998 688987765444333332221 222222234779999999999


Q ss_pred             CCCCCCCCHhhH
Q 041728           83 GNPESRLIITLT   94 (108)
Q Consensus        83 ~~p~~Rp~~~~l   94 (108)
                      .+|.+||++.++
T Consensus       246 ~~p~~Rps~~~l  257 (262)
T cd00192         246 LDPEDRPTFSEL  257 (262)
T ss_pred             CCcccCcCHHHH
Confidence            999999999998

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=3.2e-17  Score=95.45  Aligned_cols=95  Identities=18%  Similarity=0.183  Sum_probs=67.6

Q ss_pred             cccccceeccccccc-----CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCC-CcCCCCCCCchHHHHHH
Q 041728            4 ILLEFMNFFEGLAYT-----IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPL-DEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~   77 (108)
                      ..|+..|+|||.+..     ..++.++|+|++|++++++++|..||................ .....+......+.+++
T Consensus       173 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  252 (275)
T cd06608         173 FIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFI  252 (275)
T ss_pred             ccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHH
Confidence            447788999998753     335678999999999999999999997654443333222221 12222221235789999


Q ss_pred             hhhcCCCCCCCCCHhhHHHHH
Q 041728           78 FSCLNGNPESRLIITLTDGLK   98 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~~l~   98 (108)
                      ..||..||.+||++.+++.++
T Consensus       253 ~~~l~~dp~~Rpt~~~ll~~~  273 (275)
T cd06608         253 SECLIKNYEQRPFMEELLEHP  273 (275)
T ss_pred             HHHhhcChhhCcCHHHHhcCC
Confidence            999999999999999985443

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.69  E-value=8.4e-17  Score=94.94  Aligned_cols=98  Identities=16%  Similarity=0.124  Sum_probs=70.9

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcC-CCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP-IPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+++.|++||.+....++.++|+|++|+++|++++|..||............. ........+...+..+.+++..||.
T Consensus       175 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  254 (293)
T cd06647         175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLE  254 (293)
T ss_pred             ccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHcc
Confidence            357778999999887788889999999999999999999997654332222111 1111111122223568899999999


Q ss_pred             CCCCCCCCHhhHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .+|.+||+++++..+.++.
T Consensus       255 ~~p~~Rp~~~~il~h~~~~  273 (293)
T cd06647         255 MDVEKRGSAKELLQHPFLK  273 (293)
T ss_pred             CChhhCcCHHHHhcCHHHh
Confidence            9999999999996666554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.69  E-value=1.4e-16  Score=95.80  Aligned_cols=94  Identities=22%  Similarity=0.336  Sum_probs=67.2

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhh-hcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQL-HLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ++..|++||.+....++.++|+|++|+++|++++ |..|+.......... ..... .....+......+.+++..||+.
T Consensus       243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~cl~~  321 (343)
T cd05103         243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMRAPDYTTPEMYQTMLDCWHG  321 (343)
T ss_pred             CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhcc-CCCCCCCCCCHHHHHHHHHHccC
Confidence            4567999999887888899999999999999986 888887543221111 11111 11112223346789999999999


Q ss_pred             CCCCCCCHhhH-HHHHHH
Q 041728           84 NPESRLIITLT-DGLKRL  100 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l  100 (108)
                      +|.+||++.+| ..+..+
T Consensus       322 ~p~~Rps~~eil~~l~~~  339 (343)
T cd05103         322 EPSQRPTFSELVEHLGNL  339 (343)
T ss_pred             ChhhCcCHHHHHHHHHHH
Confidence            99999999999 545544

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.69  E-value=2.2e-17  Score=95.57  Aligned_cols=85  Identities=14%  Similarity=0.055  Sum_probs=73.1

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      .+.||||-|+|||.+....|+.++|.|++|+++|||+.|.+||...++...+..+...  ....|+.-...+.+|+.+++
T Consensus       199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~--~v~fP~~fs~~~kdLl~~LL  276 (355)
T KOG0616|consen  199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEG--KVKFPSYFSSDAKDLLKKLL  276 (355)
T ss_pred             EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhC--cccCCcccCHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999999999988877765554  33345555577999999999


Q ss_pred             CCCCCCC
Q 041728           82 NGNPESR   88 (108)
Q Consensus        82 ~~~p~~R   88 (108)
                      +.|-..|
T Consensus       277 ~vD~t~R  283 (355)
T KOG0616|consen  277 QVDLTKR  283 (355)
T ss_pred             hhhhHhh
Confidence            9998888

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.69  E-value=3.7e-17  Score=94.86  Aligned_cols=93  Identities=14%  Similarity=0.139  Sum_probs=67.7

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCC-----CCCCchHHHHHH
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLD-----PRLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~   77 (108)
                      ..|+..|++||.+... .++.++|+|++|++++++++|..||.....................     ... +..+.+++
T Consensus       166 ~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li  244 (267)
T cd06610         166 FVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKY-SKSFRKMI  244 (267)
T ss_pred             ccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccc-cHHHHHHH
Confidence            4578899999988766 6788999999999999999999999766543322211111111111     122 26689999


Q ss_pred             hhhcCCCCCCCCCHhhHHHH
Q 041728           78 FSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~~l   97 (108)
                      ..||..+|++||++.+++.+
T Consensus       245 ~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         245 SLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             HHHcCCChhhCcCHHHHhhC
Confidence            99999999999999998544

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.69  E-value=1.6e-16  Score=94.05  Aligned_cols=95  Identities=20%  Similarity=0.247  Sum_probs=69.1

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+.+..++.++|+||+|+++|++++ |..|+.+............. .....+......+.+++..||..+
T Consensus       173 ~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~c~~~~  251 (303)
T cd05110         173 MPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG-ERLPQPPICTIDVYMVMVKCWMID  251 (303)
T ss_pred             cccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHcCCC
Confidence            4568999999888888899999999999999987 88888765433222222111 111222233467899999999999


Q ss_pred             CCCCCCHhhH-HHHHHHH
Q 041728           85 PESRLIITLT-DGLKRLA  101 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l~  101 (108)
                      |++||+++++ ..+..+.
T Consensus       252 p~~Rp~~~~l~~~l~~~~  269 (303)
T cd05110         252 ADSRPKFKELAAEFSRMA  269 (303)
T ss_pred             hhhCcCHHHHHHHHHHHH
Confidence            9999999998 6565553

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.69  E-value=1e-16  Score=92.68  Aligned_cols=88  Identities=25%  Similarity=0.353  Sum_probs=67.2

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+....++.++|+|++|+++|++++ |..|+............... .....+...+..+.+++..||..+
T Consensus       163 ~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~  241 (256)
T cd05112         163 FPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG-FRLYKPRLASQSVYELMQHCWKER  241 (256)
T ss_pred             cchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHHcccC
Confidence            4567999999887888889999999999999998 88888765443333322222 122233444578999999999999


Q ss_pred             CCCCCCHhhH
Q 041728           85 PESRLIITLT   94 (108)
Q Consensus        85 p~~Rp~~~~l   94 (108)
                      |++||++.++
T Consensus       242 p~~Rp~~~~~  251 (256)
T cd05112         242 PEDRPSFSLL  251 (256)
T ss_pred             hhhCCCHHHH
Confidence            9999999998

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.69  E-value=8.2e-17  Score=93.45  Aligned_cols=98  Identities=13%  Similarity=0.077  Sum_probs=70.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch-----hHHhhhhcCCCCCcCCCCCCCchHHHHHHh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF-----FLQFQLHLPIPLDEMLDPRLPPDPLFDVAF   78 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   78 (108)
                      ..++..|++||.+....++.++|+|++|++++++++|..|+....     .....................+.++.+++.
T Consensus       159 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  238 (265)
T cd06605         159 FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVN  238 (265)
T ss_pred             ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHH
Confidence            457788999999988888899999999999999999999986541     112111111111111111113367999999


Q ss_pred             hhcCCCCCCCCCHhhHHHHHHHH
Q 041728           79 SCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        79 ~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .||..+|.+||++.++..+.++.
T Consensus       239 ~~l~~~p~~Rpt~~~ll~~~~~~  261 (265)
T cd06605         239 LCLIKDPRERPSYKELLEHPFIK  261 (265)
T ss_pred             HHcCCCchhCcCHHHHhhCchhh
Confidence            99999999999999997666653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.69  E-value=3.9e-17  Score=97.77  Aligned_cols=92  Identities=13%  Similarity=-0.005  Sum_probs=69.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|..||.................  ..+...+..+.+++.+||..
T Consensus       155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~  232 (328)
T cd05593         155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDI--KFPRTLSADAKSLLSGLLIK  232 (328)
T ss_pred             ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCc--cCCCCCCHHHHHHHHHHcCC
Confidence            5689999999999888889999999999999999999999976554433332222111  11222337799999999999


Q ss_pred             CCCCCC-----CHhhHHHH
Q 041728           84 NPESRL-----IITLTDGL   97 (108)
Q Consensus        84 ~p~~Rp-----~~~~l~~l   97 (108)
                      +|.+|+     ++.++..+
T Consensus       233 dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         233 DPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             CHHHcCCCCCCCHHHHhcC
Confidence            999997     77777543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.69  E-value=1.3e-16  Score=95.07  Aligned_cols=93  Identities=18%  Similarity=0.130  Sum_probs=67.7

Q ss_pred             cccccceecccccc---cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAY---TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~---~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ..|+..|++||.+.   ...++.++|+|++|++++++++|..|+.........................+..+.+++.+|
T Consensus       181 ~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  260 (317)
T cd06635         181 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSC  260 (317)
T ss_pred             ccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHH
Confidence            45788999999874   356778999999999999999999998765443333322221112222222336789999999


Q ss_pred             cCCCCCCCCCHhhHHH
Q 041728           81 LNGNPESRLIITLTDG   96 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~   96 (108)
                      |+.+|.+||++.++..
T Consensus       261 l~~~p~~Rpt~~~il~  276 (317)
T cd06635         261 LQKIPQDRPTSEELLK  276 (317)
T ss_pred             ccCCcccCcCHHHHHh
Confidence            9999999999999844

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=2e-17  Score=99.50  Aligned_cols=96  Identities=14%  Similarity=0.021  Sum_probs=70.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCC--CCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPI--PLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..||+.|+|||.+....++.++||||+|+++|++++|..||..............  ...........+..+.+++..|+
T Consensus       190 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll  269 (350)
T cd05573         190 TVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLL  269 (350)
T ss_pred             cccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHc
Confidence            4689999999999888899999999999999999999999987654433322221  11111111112477999999999


Q ss_pred             CCCCCCCCC-HhhHHHHHHH
Q 041728           82 NGNPESRLI-ITLTDGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~-~~~l~~l~~l  100 (108)
                      . +|.+|++ +++++.+.++
T Consensus       270 ~-dp~~R~~s~~~ll~hp~~  288 (350)
T cd05573         270 C-DPEDRLGSFEEIKSHPFF  288 (350)
T ss_pred             c-ChhhcCCCHHHHhcCCCc
Confidence            7 9999999 9998654443

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.69  E-value=1.4e-16  Score=92.91  Aligned_cols=94  Identities=18%  Similarity=0.201  Sum_probs=68.7

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      +++.|++||......++.++|+||+|+++|++++ |..|+.+...................+.. ...+.+++..||..+
T Consensus       177 ~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~l~~~  255 (273)
T cd05074         177 LPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDC-LEDVYELMCQCWSPE  255 (273)
T ss_pred             CchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCC-CHHHHHHHHHHcCCC
Confidence            4567999998887788889999999999999998 88888765543333222221111111222 367999999999999


Q ss_pred             CCCCCCHhhH-HHHHHH
Q 041728           85 PESRLIITLT-DGLKRL  100 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l  100 (108)
                      |+.||++.++ ..++.+
T Consensus       256 p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         256 PKCRPSFQHLRDQLELI  272 (273)
T ss_pred             hhhCcCHHHHHHHHHhh
Confidence            9999999999 666543

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.69  E-value=2.5e-16  Score=92.37  Aligned_cols=94  Identities=16%  Similarity=0.137  Sum_probs=65.6

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH-Hhhh--------------hcCCCCCcCCCCCCCc
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL-QFQL--------------HLPIPLDEMLDPRLPP   70 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~-~~~~--------------~~~~~~~~~~~~~~~~   70 (108)
                      ++..|++||......++.++|+||+|++++++++|..|+...... ....              ..... .....+...+
T Consensus       172 ~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  250 (283)
T cd05080         172 SPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERG-MRLPCPKNCP  250 (283)
T ss_pred             CCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcC-CCCCCCCCCC
Confidence            456799999988788889999999999999999998887532210 0000              00000 1111122234


Q ss_pred             hHHHHHHhhhcCCCCCCCCCHhhH-HHHHHH
Q 041728           71 DPLFDVAFSCLNGNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        71 ~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l  100 (108)
                      .++.+++..||..+|++||+++++ ..++.+
T Consensus       251 ~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         251 QEVYILMKNCWETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence            779999999999999999999999 555543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.69  E-value=9.2e-17  Score=94.75  Aligned_cols=98  Identities=17%  Similarity=0.102  Sum_probs=71.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCC-cCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLD-EMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..|+..|+|||.+....++.++|+||+|++++++++|..|+................. ........+..+.+++..||.
T Consensus       178 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  257 (292)
T cd06658         178 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLV  257 (292)
T ss_pred             eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHcc
Confidence            4578899999999877888899999999999999999999876543332221111111 111111223668999999999


Q ss_pred             CCCCCCCCHhhHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .+|.+||++++++...++.
T Consensus       258 ~~P~~Rpt~~~il~~~~~~  276 (292)
T cd06658         258 REPSQRATAQELLQHPFLK  276 (292)
T ss_pred             CChhHCcCHHHHhhChhhh
Confidence            9999999999996665554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.69  E-value=2.1e-16  Score=92.05  Aligned_cols=92  Identities=18%  Similarity=0.216  Sum_probs=67.2

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCCC
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNP   85 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p   85 (108)
                      +..|++||.+....++.++|+|++|++++++++ |..||......+......... ....+...+..+.+++.+||+.+|
T Consensus       172 ~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p  250 (267)
T cd05066         172 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY-RLPAPMDCPAALHQLMLDCWQKDR  250 (267)
T ss_pred             ceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC-cCCCCCCCCHHHHHHHHHHcccCc
Confidence            457999999988888899999999999999886 999987654333222222221 111112223678999999999999


Q ss_pred             CCCCCHhhH-HHHHH
Q 041728           86 ESRLIITLT-DGLKR   99 (108)
Q Consensus        86 ~~Rp~~~~l-~~l~~   99 (108)
                      .+||++.++ ..++.
T Consensus       251 ~~Rp~~~~i~~~l~~  265 (267)
T cd05066         251 NERPKFEQIVSILDK  265 (267)
T ss_pred             hhCCCHHHHHHHHHh
Confidence            999999999 55544

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.68  E-value=7.2e-17  Score=96.00  Aligned_cols=95  Identities=16%  Similarity=0.113  Sum_probs=68.6

Q ss_pred             cccccceecccccc---cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC-CCcCCCCCCCchHHHHHHhh
Q 041728            4 ILLEFMNFFEGLAY---TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP-LDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         4 ~~~~~~~~ape~~~---~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ..|+..|++||.+.   ...++.++|+||+|+++|++++|..|+............... ......+.. +..+.+++..
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~  255 (313)
T cd06633         177 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEW-TDSFRGFVDY  255 (313)
T ss_pred             ccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCcccc-CHHHHHHHHH
Confidence            45788899999874   355778899999999999999999998766544333322111 112222222 3568999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKR   99 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~   99 (108)
                      ||+.+|.+||++.++..+.+
T Consensus       256 ~l~~~P~~Rp~~~~~l~~~~  275 (313)
T cd06633         256 CLQKIPQERPASAELLRHDF  275 (313)
T ss_pred             HccCChhhCcCHHHHhcCcc
Confidence            99999999999999854433

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.68  E-value=1.4e-16  Score=91.84  Aligned_cols=90  Identities=22%  Similarity=0.316  Sum_probs=67.1

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCCC
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNP   85 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p   85 (108)
                      +..|++||.+....++.++|+|++|++++++++ |..|+............... .....+...+..+.+++.+||..+|
T Consensus       158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p  236 (251)
T cd05041         158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG-YRMPAPQLCPEEIYRLMLQCWAYDP  236 (251)
T ss_pred             eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC-CCCCCCccCCHHHHHHHHHHhccCh
Confidence            456999999888888899999999999999998 78888765543333322221 1222233334779999999999999


Q ss_pred             CCCCCHhhH-HHH
Q 041728           86 ESRLIITLT-DGL   97 (108)
Q Consensus        86 ~~Rp~~~~l-~~l   97 (108)
                      .+||++.++ ..|
T Consensus       237 ~~Rp~~~ell~~l  249 (251)
T cd05041         237 ENRPSFSEIYNEL  249 (251)
T ss_pred             hhCcCHHHHHHHh
Confidence            999999998 443

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.68  E-value=2e-16  Score=93.68  Aligned_cols=90  Identities=18%  Similarity=0.193  Sum_probs=63.9

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh--CCCCCCcchhHHhhhh------cCCCCCcCCCCCCCchHHHHH
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK--GKHPRDQMFFLQFQLH------LPIPLDEMLDPRLPPDPLFDV   76 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l   76 (108)
                      .++..|+|||.+....++.++|+||+|+++|++++  +..|+...........      ..........+...+..+.++
T Consensus       201 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  280 (304)
T cd05096         201 VLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYEL  280 (304)
T ss_pred             CCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHH
Confidence            34678999999888889999999999999999986  5667765432222110      001111111222233779999


Q ss_pred             HhhhcCCCCCCCCCHhhH
Q 041728           77 AFSCLNGNPESRLIITLT   94 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~~~~l   94 (108)
                      +..||..+|.+||++.+|
T Consensus       281 i~~cl~~~p~~RPs~~~i  298 (304)
T cd05096         281 MLQCWSRDCRERPSFSDI  298 (304)
T ss_pred             HHHHccCCchhCcCHHHH
Confidence            999999999999999999

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.68  E-value=1.7e-16  Score=92.47  Aligned_cols=91  Identities=19%  Similarity=0.222  Sum_probs=66.3

Q ss_pred             cceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCCCC
Q 041728            8 FMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNPE   86 (108)
Q Consensus         8 ~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p~   86 (108)
                      ..|++||.+....++.++|+|++|+++|++++ |..||............... .....+...+..+.+++..||..+|.
T Consensus       175 ~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~li~~~l~~~p~  253 (269)
T cd05065         175 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD-YRLPPPMDCPTALHQLMLDCWQKDRN  253 (269)
T ss_pred             eeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-CcCCCcccCCHHHHHHHHHHcCCChh
Confidence            46999999988888899999999999999886 89898765433332222211 11111222236789999999999999


Q ss_pred             CCCCHhhH-HHHHH
Q 041728           87 SRLIITLT-DGLKR   99 (108)
Q Consensus        87 ~Rp~~~~l-~~l~~   99 (108)
                      +||++++| ..++.
T Consensus       254 ~Rp~~~~i~~~l~~  267 (269)
T cd05065         254 ARPKFGQIVSTLDK  267 (269)
T ss_pred             hCcCHHHHHHHHHh
Confidence            99999999 54443

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.68  E-value=2.3e-16  Score=92.35  Aligned_cols=94  Identities=20%  Similarity=0.251  Sum_probs=71.0

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCCC
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGNP   85 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p   85 (108)
                      +..|++||.+....++.++|+|++|++++++++ |..|+............... .....+......+.+++..||..+|
T Consensus       174 ~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~p  252 (279)
T cd05057         174 PIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG-ERLPQPPICTIDVYMVLVKCWMIDA  252 (279)
T ss_pred             cccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHHcCCCh
Confidence            457999999887888899999999999999998 99998876544433332222 1222233344678999999999999


Q ss_pred             CCCCCHhhH-HHHHHHH
Q 041728           86 ESRLIITLT-DGLKRLA  101 (108)
Q Consensus        86 ~~Rp~~~~l-~~l~~l~  101 (108)
                      ..||++.++ ..+..+.
T Consensus       253 ~~Rp~~~~l~~~l~~~~  269 (279)
T cd05057         253 ESRPTFKELINEFSKMA  269 (279)
T ss_pred             hhCCCHHHHHHHHHHHH
Confidence            999999999 6666553

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.68  E-value=1.8e-16  Score=105.59  Aligned_cols=99  Identities=24%  Similarity=0.428  Sum_probs=68.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch-----hHHhhhhc--CCCCCcCCCCCC------Cc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF-----FLQFQLHL--PIPLDEMLDPRL------PP   70 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~~~~------~~   70 (108)
                      ..+++.|+|||.+....++.++||||+|+++||+++|+.|+....     ...+....  ........++..      ..
T Consensus       838 ~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  917 (968)
T PLN00113        838 CFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQ  917 (968)
T ss_pred             ccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccH
Confidence            357789999999988889999999999999999999999985321     11111110  000011111111      11


Q ss_pred             ---hHHHHHHhhhcCCCCCCCCCHhhH-HHHHHHHH
Q 041728           71 ---DPLFDVAFSCLNGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        71 ---~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                         .++.+++..||+.+|++||+++++ ..++.+..
T Consensus       918 ~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        918 NEIVEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             HHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence               246788999999999999999999 66766543

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.68  E-value=1.4e-16  Score=94.22  Aligned_cols=98  Identities=15%  Similarity=0.096  Sum_probs=71.5

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCC-cCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLD-EMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..|+..|++||.+....++.++|+|++|++++++++|..||................. ........+..+.+++..||+
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~  256 (297)
T cd06659         177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLT  256 (297)
T ss_pred             eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhc
Confidence            4578899999999877888999999999999999999999875543333222211111 111111123668999999999


Q ss_pred             CCCCCCCCHhhHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .+|.+||+++++..+..+.
T Consensus       257 ~~P~~Rps~~~ll~~~~~~  275 (297)
T cd06659         257 REPQERATAQELLDHPFLL  275 (297)
T ss_pred             CCcccCcCHHHHhhChhhc
Confidence            9999999999996665554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.68  E-value=5.3e-17  Score=96.97  Aligned_cols=93  Identities=13%  Similarity=0.036  Sum_probs=69.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|+|||.+....++.++|+||+|+++|++++|..||..................  .+...+.++.+++..||..
T Consensus       155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~li~~~L~~  232 (323)
T cd05595         155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKK  232 (323)
T ss_pred             ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC--CCCCCCHHHHHHHHHHccC
Confidence            56899999999998888899999999999999999999999765433322221111111  1222337799999999999


Q ss_pred             CCCCCC-----CHhhHHHHH
Q 041728           84 NPESRL-----IITLTDGLK   98 (108)
Q Consensus        84 ~p~~Rp-----~~~~l~~l~   98 (108)
                      +|.+|+     ++.++..+.
T Consensus       233 dP~~R~~~~~~~~~~~l~h~  252 (323)
T cd05595         233 DPKQRLGGGPSDAKEVMEHR  252 (323)
T ss_pred             CHHHhCCCCCCCHHHHHcCC
Confidence            999998     677764443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.68  E-value=6e-17  Score=95.06  Aligned_cols=95  Identities=20%  Similarity=0.143  Sum_probs=67.7

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH-----------HhhhhcCCCCCcCCCCCCCchH
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL-----------QFQLHLPIPLDEMLDPRLPPDP   72 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~   72 (108)
                      ..|+..|++||.+....++.++|+|++|++++++++|..||......           ...................+..
T Consensus       162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd06620         162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPED  241 (284)
T ss_pred             cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHH
Confidence            46788999999988788888999999999999999999998754321           1111111111111111112256


Q ss_pred             HHHHHhhhcCCCCCCCCCHhhHHHHH
Q 041728           73 LFDVAFSCLNGNPESRLIITLTDGLK   98 (108)
Q Consensus        73 ~~~l~~~c~~~~p~~Rp~~~~l~~l~   98 (108)
                      +.+++..||..+|++||+++++..+.
T Consensus       242 ~~~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         242 LRDFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             HHHHHHHHhcCCcccCcCHHHHhcCc
Confidence            89999999999999999999995443

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.68  E-value=1.9e-16  Score=91.60  Aligned_cols=92  Identities=22%  Similarity=0.292  Sum_probs=67.7

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+....++.++|+||+|++++++++ |..|+.................. ..+...+..+.+++..||..+
T Consensus       161 ~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~  239 (256)
T cd05039         161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRM-EAPEGCPPEVYKVMKDCWELD  239 (256)
T ss_pred             CcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC-CCccCCCHHHHHHHHHHhccC
Confidence            3557999999887888889999999999999997 88888766443332222222111 112223477999999999999


Q ss_pred             CCCCCCHhhH-HHHH
Q 041728           85 PESRLIITLT-DGLK   98 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~   98 (108)
                      |.+||+++++ ..|.
T Consensus       240 p~~Rp~~~~l~~~l~  254 (256)
T cd05039         240 PAKRPTFKQLREQLA  254 (256)
T ss_pred             hhhCcCHHHHHHHHh
Confidence            9999999999 5554

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.68  E-value=1.4e-17  Score=107.00  Aligned_cols=100  Identities=14%  Similarity=0.138  Sum_probs=84.8

Q ss_pred             cccccccceecccccc-----cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCC-CcCCCCCCCchHHHH
Q 041728            2 TDILLEFMNFFEGLAY-----TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPL-DEMLDPRLPPDPLFD   75 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~-----~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   75 (108)
                      .+++||+.|||||++.     ...|+..+|+||+|++..|+..|.+|+..+++...+..+++.. +....+..+..++.+
T Consensus       181 nT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~Fnd  260 (953)
T KOG0587|consen  181 NTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFND  260 (953)
T ss_pred             cCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHH
Confidence            5789999999999986     2457889999999999999999999999999999888665554 444456667788999


Q ss_pred             HHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ++..|+.+|-.+||+..+++++.+|.
T Consensus       261 FIs~cL~Kd~e~RP~~~~ll~hpFi~  286 (953)
T KOG0587|consen  261 FISTCLVKDYEQRPSTEELLKHPFIT  286 (953)
T ss_pred             HHHHHHhhccccCcchhhhccCCccc
Confidence            99999999999999999987766654

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.68  E-value=2.1e-16  Score=91.63  Aligned_cols=88  Identities=24%  Similarity=0.350  Sum_probs=66.1

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+....++.++|+||+|++++++++ |..||.+...................... +..+.+++.+||..+
T Consensus       166 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~l~~~  244 (261)
T cd05034         166 FPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNC-PEELYDLMLQCWDKD  244 (261)
T ss_pred             CCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCC-CHHHHHHHHHHcccC
Confidence            3457999999887788889999999999999998 99998765443333322222111222223 367999999999999


Q ss_pred             CCCCCCHhhH
Q 041728           85 PESRLIITLT   94 (108)
Q Consensus        85 p~~Rp~~~~l   94 (108)
                      |.+||+++++
T Consensus       245 p~~Rp~~~~l  254 (261)
T cd05034         245 PEERPTFEYL  254 (261)
T ss_pred             cccCCCHHHH
Confidence            9999999998

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.68  E-value=9.5e-17  Score=94.15  Aligned_cols=95  Identities=14%  Similarity=0.005  Sum_probs=67.9

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH----HhhhhcCCCCCcCCCCCCCchHHHHHHhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL----QFQLHLPIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ..|++.|+|||.+....++.++|+||+|+++|++++|..||......    .........  ....+...+..+.+++.+
T Consensus       157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~  234 (280)
T cd05608         157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEA  234 (280)
T ss_pred             cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHH
Confidence            46889999999999888899999999999999999999998753211    111111111  111122233679999999


Q ss_pred             hcCCCCCCCC-----CHhhHHHHHHH
Q 041728           80 CLNGNPESRL-----IITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp-----~~~~l~~l~~l  100 (108)
                      ||..+|++|+     ++++++.+.++
T Consensus       235 ~l~~~P~~R~~~~~~~~~~~l~h~~~  260 (280)
T cd05608         235 LLAKDPEKRLGFRDGNCDGLRTHPLF  260 (280)
T ss_pred             HhcCCHHHhcCCCCCCHHHHhcChhh
Confidence            9999999999     55666555544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.68  E-value=3.8e-17  Score=98.25  Aligned_cols=96  Identities=9%  Similarity=0.008  Sum_probs=72.1

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||.+................  .+...+..+.+++.+|++
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~--~p~~~~~~~~~li~~~l~  264 (340)
T PTZ00426        187 TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIY--FPKFLDNNCKHLMKKLLS  264 (340)
T ss_pred             eecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC--CCCCCCHHHHHHHHHHcc
Confidence            356899999999998878889999999999999999999999876544333322222111  122334679999999999


Q ss_pred             CCCCCCC-----CHhhHHHHHHH
Q 041728           83 GNPESRL-----IITLTDGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp-----~~~~l~~l~~l  100 (108)
                      .+|.+|+     +++++..+.++
T Consensus       265 ~dp~~R~~~~~~~~~~~~~hp~f  287 (340)
T PTZ00426        265 HDLTKRYGNLKKGAQNVKEHPWF  287 (340)
T ss_pred             cCHHHcCCCCCCCHHHHHcCCCc
Confidence            9999995     78887555443

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.67  E-value=2.9e-16  Score=91.04  Aligned_cols=99  Identities=15%  Similarity=0.082  Sum_probs=73.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch---hHHhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF---FLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ..++..|++||.+....++.++|+|++|+++|++++|..|+....   .....................+..+.+++..|
T Consensus       160 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  239 (264)
T cd06623         160 FVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISAC  239 (264)
T ss_pred             eeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHH
Confidence            356788999999888888889999999999999999999987653   12222222222222222221336799999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      |..+|++||++.+++.++++..
T Consensus       240 l~~~p~~R~~~~~ll~~~~~~~  261 (264)
T cd06623         240 LQKDPKKRPSAAELLQHPFIKK  261 (264)
T ss_pred             ccCChhhCCCHHHHHhCHHHHh
Confidence            9999999999999977777654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.67  E-value=1.3e-16  Score=95.41  Aligned_cols=98  Identities=18%  Similarity=0.160  Sum_probs=66.2

Q ss_pred             ccccceeccccccc--CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh-cCCCCCcC------------------
Q 041728            5 LLEFMNFFEGLAYT--IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH-LPIPLDEM------------------   63 (108)
Q Consensus         5 ~~~~~~~ape~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------------------   63 (108)
                      .++..|+|||.+..  ..++.++|+||+|++++++++|..||........... ........                  
T Consensus       169 ~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (327)
T cd08227         169 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRS  248 (327)
T ss_pred             cceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCccc
Confidence            35667999999875  3578899999999999999999999875432211110 00000000                  


Q ss_pred             --------------C-----------CCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           64 --------------L-----------DPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        64 --------------~-----------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                                    .           ........+.+++..||+.||++||++++++.+.++..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~  312 (327)
T cd08227         249 GANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  312 (327)
T ss_pred             CCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence                          0           00001245889999999999999999999976666543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.67  E-value=1.9e-16  Score=91.89  Aligned_cols=98  Identities=17%  Similarity=0.116  Sum_probs=72.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch--hHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF--FLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..++..|++||.+....++.++|+|++|+++|++++|..|+....  .................+...+..+.+++.+||
T Consensus       152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  231 (262)
T cd05572         152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLL  231 (262)
T ss_pred             ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHc
Confidence            457889999999887778889999999999999999999987554  333322222111122222222477999999999


Q ss_pred             CCCCCCCCC-----HhhHHHHHHHH
Q 041728           82 NGNPESRLI-----ITLTDGLKRLA  101 (108)
Q Consensus        82 ~~~p~~Rp~-----~~~l~~l~~l~  101 (108)
                      ..+|.+|++     +.++..+.++.
T Consensus       232 ~~~p~~R~~~~~~~~~~l~~~~~~~  256 (262)
T cd05572         232 RRNPEERLGNLKGGIKDIKKHKWFN  256 (262)
T ss_pred             cCChhhCcCCcccCHHHHhcChhhh
Confidence            999999999     78886666654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.67  E-value=1.4e-16  Score=102.62  Aligned_cols=97  Identities=21%  Similarity=0.236  Sum_probs=81.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      .+-++.|||-|.+....|.+.+|||+||+.+||+++ |..|+++....++...++.+ .++.+|.+++..++.+|.+||.
T Consensus       860 gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~g-eRLsqPpiCtiDVy~~mvkCwm  938 (1177)
T KOG1025|consen  860 GKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKG-ERLSQPPICTIDVYMVMVKCWM  938 (1177)
T ss_pred             cccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcc-ccCCCCCCccHHHHHHHHHHhc
Confidence            345678999999999999999999999999999998 99999988765555544444 4577777787889999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      .|+..||+|+++ ..+.++.
T Consensus       939 id~~~rp~fkel~~~fs~~a  958 (1177)
T KOG1025|consen  939 IDADSRPTFKELAEEFSRMA  958 (1177)
T ss_pred             cCcccCccHHHHHHHHHHHh
Confidence            999999999999 6655543

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.67  E-value=2.6e-16  Score=92.69  Aligned_cols=90  Identities=19%  Similarity=0.212  Sum_probs=63.8

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh--CCCCCCcchhHHhhhhcC------CCCCcCCCCCCCchHHHHH
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK--GKHPRDQMFFLQFQLHLP------IPLDEMLDPRLPPDPLFDV   76 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l   76 (108)
                      .+++.|++||.+....++.++|+||+|+++|++++  +..|+.............      ........+...+.++.++
T Consensus       193 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  272 (296)
T cd05051         193 PLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYEL  272 (296)
T ss_pred             CCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHH
Confidence            35678999999887788899999999999999987  666776543322211110      0011111122233679999


Q ss_pred             HhhhcCCCCCCCCCHhhH
Q 041728           77 AFSCLNGNPESRLIITLT   94 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~~~~l   94 (108)
                      +..||+.+|.+||++.+|
T Consensus       273 i~~cl~~~p~~Rpt~~el  290 (296)
T cd05051         273 MLECWRRDEEDRPTFREI  290 (296)
T ss_pred             HHHHhccChhcCCCHHHH
Confidence            999999999999999999

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.67  E-value=2.3e-16  Score=93.62  Aligned_cols=99  Identities=16%  Similarity=0.148  Sum_probs=69.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCC-----------------------
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPL-----------------------   60 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------   60 (108)
                      ..|+..|++||.+.+..++.++|+|++|++++++++|..|+................                       
T Consensus       158 ~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (308)
T cd06615         158 FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPM  237 (308)
T ss_pred             CCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchh
Confidence            457889999999877778889999999999999999999986443222111000000                       


Q ss_pred             -------------CcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           61 -------------DEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        61 -------------~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                                   .........+.++.+++..||..+|++||++.++....++..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~  292 (308)
T cd06615         238 AIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR  292 (308)
T ss_pred             hHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhh
Confidence                         000000112256899999999999999999999976666654

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.67  E-value=2.8e-16  Score=90.89  Aligned_cols=89  Identities=21%  Similarity=0.258  Sum_probs=66.5

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      .+..|++||.+....++.++|+|++|+++|++++ |..||........................ +..+.+++..||..+
T Consensus       159 ~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~~  237 (254)
T cd05083         159 LPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGC-PADVYVLMTSCWETE  237 (254)
T ss_pred             CCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcC-CHHHHHHHHHHcCCC
Confidence            3567999999887888899999999999999997 88888766543333322222111112222 367899999999999


Q ss_pred             CCCCCCHhhHH
Q 041728           85 PESRLIITLTD   95 (108)
Q Consensus        85 p~~Rp~~~~l~   95 (108)
                      |..||+++++.
T Consensus       238 p~~Rp~~~~l~  248 (254)
T cd05083         238 PKKRPSFHKLR  248 (254)
T ss_pred             hhhCcCHHHHH
Confidence            99999999983

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.67  E-value=8.9e-17  Score=92.88  Aligned_cols=93  Identities=18%  Similarity=0.123  Sum_probs=68.4

Q ss_pred             cccccceecccccccCC-CcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCC-CCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIK-ITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPI-PLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~-~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..|+..|++||.+.... ++.++|+|++|+++|++++|..||.............. .......+.. ...+.+++.+||
T Consensus       161 ~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l  239 (258)
T cd06632         161 FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHL-SDEAKDFILKCL  239 (258)
T ss_pred             cCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCc-CHHHHHHHHHHh
Confidence            45788899999887655 78899999999999999999999876553333322221 1111222222 367899999999


Q ss_pred             CCCCCCCCCHhhHHHH
Q 041728           82 NGNPESRLIITLTDGL   97 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l   97 (108)
                      ..+|.+||++.+++.+
T Consensus       240 ~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         240 QRDPSLRPTAAELLEH  255 (258)
T ss_pred             hcCcccCcCHHHHhcC
Confidence            9999999999998543

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.67  E-value=8.2e-17  Score=97.16  Aligned_cols=98  Identities=11%  Similarity=0.054  Sum_probs=69.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh-----------------------hcCCC-
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL-----------------------HLPIP-   59 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~-   59 (108)
                      ..||+.|+|||.+.+..++.++|+||+|+++|++++|+.||.+........                       ..... 
T Consensus       178 ~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (355)
T cd07874         178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRP  257 (355)
T ss_pred             ccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCC
Confidence            468899999999988888999999999999999999999987543211100                       00000 


Q ss_pred             C------C----cC------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           60 L------D----EM------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        60 ~------~----~~------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .      .    ..      ..+......+.+++.+|+..||.+||++.+++.+.++.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~  315 (355)
T cd07874         258 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYIN  315 (355)
T ss_pred             ccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchh
Confidence            0      0    00      00011124578999999999999999999997666654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=7.4e-17  Score=99.40  Aligned_cols=99  Identities=15%  Similarity=0.112  Sum_probs=83.7

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      .+|||||-|.|||.+....++.++|.|++|++++|+++|.+||.+.+++.++..+..+....-.|+.......+++..+-
T Consensus       577 wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LC  656 (732)
T KOG0614|consen  577 WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLC  656 (732)
T ss_pred             eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHH
Confidence            57999999999999999999999999999999999999999999999999988776665555556555577889999988


Q ss_pred             CCCCCCCCC-----HhhHHHHHHH
Q 041728           82 NGNPESRLI-----ITLTDGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~-----~~~l~~l~~l  100 (108)
                      ..+|.+|..     +.+|.++.++
T Consensus       657 r~~P~ERLG~~~~gI~DIkkH~Wf  680 (732)
T KOG0614|consen  657 RDNPTERLGYQKGGINDIKKHRWF  680 (732)
T ss_pred             hcCcHhhhccccCChHHHHhhhhh
Confidence            999999976     4555555554

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.67  E-value=7.5e-17  Score=97.63  Aligned_cols=98  Identities=14%  Similarity=0.099  Sum_probs=69.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----C-------------------CC-
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----P-------------------IP-   59 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~-------------------~~-   59 (108)
                      ..||+.|+|||.+.+..++.++|+||+|+++|++++|+.||.+..........    .                   .. 
T Consensus       185 ~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (364)
T cd07875         185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRP  264 (364)
T ss_pred             CcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCC
Confidence            46889999999998888899999999999999999999999754322211100    0                   00 


Q ss_pred             ----------CCcCCCC------CCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           60 ----------LDEMLDP------RLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        60 ----------~~~~~~~------~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                                ......+      ......+.+++.+|++.||.+||++.+++.+.++.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~  322 (364)
T cd07875         265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN  322 (364)
T ss_pred             CcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence                      0000000      01124588999999999999999999997666653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.67  E-value=1.5e-16  Score=92.31  Aligned_cols=95  Identities=18%  Similarity=0.151  Sum_probs=67.0

Q ss_pred             cccccceecccccccCC---CcccccchhhhHHHHHHHhCCCCCCcch-hHHhhhhcCCCCCcCCCCC-CCchHHHHHHh
Q 041728            4 ILLEFMNFFEGLAYTIK---ITEKYDVYSFGVLVLEVIKGKHPRDQMF-FLQFQLHLPIPLDEMLDPR-LPPDPLFDVAF   78 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~---~~~~~di~s~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~   78 (108)
                      ..++..|++||.+....   +..++|+|++|++++++++|..||.... ................... .....+.+++.
T Consensus       163 ~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  242 (264)
T cd06626         163 LAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLD  242 (264)
T ss_pred             CcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHH
Confidence            45678999999987655   7789999999999999999999997553 2222212221111111111 11366889999


Q ss_pred             hhcCCCCCCCCCHhhHHHHH
Q 041728           79 SCLNGNPESRLIITLTDGLK   98 (108)
Q Consensus        79 ~c~~~~p~~Rp~~~~l~~l~   98 (108)
                      .||+.+|.+||++.++..++
T Consensus       243 ~~l~~~p~~R~~~~~i~~~~  262 (264)
T cd06626         243 RCLESDPKKRPTASELLQHP  262 (264)
T ss_pred             HHccCCcccCCCHHHHhcCC
Confidence            99999999999999985443

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.67  E-value=1.1e-17  Score=111.05  Aligned_cols=95  Identities=20%  Similarity=0.224  Sum_probs=72.1

Q ss_pred             ccccccceecccccccCC---CcccccchhhhHHHHHHHhCCCCCCcchhH-HhhhhcCCCCCcCCCCCCCchHHHHHHh
Q 041728            3 DILLEFMNFFEGLAYTIK---ITEKYDVYSFGVLVLEVIKGKHPRDQMFFL-QFQLHLPIPLDEMLDPRLPPDPLFDVAF   78 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~---~~~~~di~s~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~   78 (108)
                      ...||+.|||||++.+..   ...+.||||+||++.||.+|+.||.....- .+..+..-+..+..+.++. .+..+|+.
T Consensus      1397 ~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls-~~g~dFle 1475 (1509)
T KOG4645|consen 1397 SMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLS-SEGRDFLE 1475 (1509)
T ss_pred             hhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhh-HhHHHHHH
Confidence            467999999999998643   446789999999999999999999876532 3333444333333333333 77999999


Q ss_pred             hhcCCCCCCCCCHhhHHHHH
Q 041728           79 SCLNGNPESRLIITLTDGLK   98 (108)
Q Consensus        79 ~c~~~~p~~Rp~~~~l~~l~   98 (108)
                      .|++.||..|.++.|++.+.
T Consensus      1476 ~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1476 HCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred             HHHhcCchhhhHHHHHHHhh
Confidence            99999999999998885443

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.67  E-value=2.8e-16  Score=91.42  Aligned_cols=88  Identities=16%  Similarity=0.186  Sum_probs=62.5

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHH-hCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVI-KGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..++..|+|||.+.. ..++.++|+||+|+++|+++ .|..|+.............. ......+ . ...+.+++.+||
T Consensus       168 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~-~-~~~~~~li~~cl  244 (262)
T cd05077         168 CVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEG-QCMLVTP-S-CKELADLMTHCM  244 (262)
T ss_pred             ccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhc-CccCCCC-C-hHHHHHHHHHHc
Confidence            347788999998863 56788999999999999997 47778765443222111111 1111111 1 256899999999


Q ss_pred             CCCCCCCCCHhhH
Q 041728           82 NGNPESRLIITLT   94 (108)
Q Consensus        82 ~~~p~~Rp~~~~l   94 (108)
                      +.+|.+||++++|
T Consensus       245 ~~dp~~Rp~~~~i  257 (262)
T cd05077         245 NYDPNQRPFFRAI  257 (262)
T ss_pred             CCChhhCcCHHHH
Confidence            9999999999998

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.67  E-value=1.5e-16  Score=92.51  Aligned_cols=94  Identities=13%  Similarity=0.022  Sum_probs=67.4

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|+..|++||.+....++.++|+||+|+++|++++|..|+.....................+......+.+++..|+. 
T Consensus       169 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-  247 (265)
T cd06652         169 VTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-  247 (265)
T ss_pred             CCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-
Confidence            3577889999998877888899999999999999999999876543333322221111111122223568899999985 


Q ss_pred             CCCCCCCHhhHHHHH
Q 041728           84 NPESRLIITLTDGLK   98 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l~   98 (108)
                      +|..||++++|+.+.
T Consensus       248 ~p~~Rp~~~~il~~~  262 (265)
T cd06652         248 EAKLRPSADELLRHT  262 (265)
T ss_pred             ChhhCCCHHHHhcCc
Confidence            899999999985443

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.66  E-value=1.3e-16  Score=92.52  Aligned_cols=93  Identities=17%  Similarity=0.060  Sum_probs=69.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|++||.+....++.++|+|++|+++|++++|..|+...................... ..+..+.+++..||..
T Consensus       165 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~  243 (260)
T cd08222         165 FTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPE-TYSRQLNSIMQSMLNK  243 (260)
T ss_pred             CCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcc-hhcHHHHHHHHHHhcC
Confidence            457788999998877778888999999999999999999987554443333222221222222 2236799999999999


Q ss_pred             CCCCCCCHhhHHHH
Q 041728           84 NPESRLIITLTDGL   97 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l   97 (108)
                      +|++||++.++..+
T Consensus       244 ~p~~Rp~~~~il~~  257 (260)
T cd08222         244 DPSLRPSAAEILRN  257 (260)
T ss_pred             ChhhCcCHHHHhhC
Confidence            99999999998544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.66  E-value=2e-16  Score=91.34  Aligned_cols=103  Identities=10%  Similarity=0.028  Sum_probs=78.2

Q ss_pred             ccccccceecccccc------cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCC--chHHH
Q 041728            3 DILLEFMNFFEGLAY------TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLP--PDPLF   74 (108)
Q Consensus         3 ~~~~~~~~~ape~~~------~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~   74 (108)
                      ..||||+|+|||.+.      ...|+.-+|+|+.|+++|.++.|.+||..-...-....+..+......|...  .++..
T Consensus       181 elCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~K  260 (411)
T KOG0599|consen  181 ELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVK  260 (411)
T ss_pred             HhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHH
Confidence            478999999999875      2457888999999999999999999997554433333344444444444333  26689


Q ss_pred             HHHhhhcCCCCCCCCCHhhHHHHHHHHHHHh
Q 041728           75 DVAFSCLNGNPESRLIITLTDGLKRLASFLL  105 (108)
Q Consensus        75 ~l~~~c~~~~p~~Rp~~~~l~~l~~l~~~~~  105 (108)
                      +++.+|++.||.+|-+.++.+.+.++.....
T Consensus       261 dLIsrlLqVdp~~Ritake~LaHpff~q~~~  291 (411)
T KOG0599|consen  261 DLISRLLQVDPTKRITAKEALAHPFFIQIAQ  291 (411)
T ss_pred             HHHHHHHeeCchhcccHHHHhcChHHHHHHH
Confidence            9999999999999999999977777765443

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.66  E-value=6.8e-17  Score=96.73  Aligned_cols=87  Identities=18%  Similarity=0.133  Sum_probs=62.8

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchh--------HHhhh-hcCCCCCcCCCCCCCchHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF--------LQFQL-HLPIPLDEMLDPRLPPDPL   73 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~   73 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||.....        ..... ........  .|...+..+
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~  232 (329)
T cd05588         155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKA  232 (329)
T ss_pred             cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC--CCCCCCHHH
Confidence            35689999999999888889999999999999999999999963211        01111 11111111  122233678


Q ss_pred             HHHHhhhcCCCCCCCCCH
Q 041728           74 FDVAFSCLNGNPESRLII   91 (108)
Q Consensus        74 ~~l~~~c~~~~p~~Rp~~   91 (108)
                      .+++.+|+..||.+|+++
T Consensus       233 ~~li~~~L~~dP~~R~~~  250 (329)
T cd05588         233 SSVLKGFLNKDPKERLGC  250 (329)
T ss_pred             HHHHHHHhccCHHHcCCC
Confidence            999999999999999973

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.66  E-value=2.3e-16  Score=92.45  Aligned_cols=90  Identities=12%  Similarity=0.041  Sum_probs=65.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchh----HHhhhhcCCCCCcCCCCCCCchHHHHHHhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF----LQFQLHLPIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ..|+..|+|||.+....++.++|+||+|+++|++++|..||.....    ................... +.++.+++..
T Consensus       154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~  232 (277)
T cd05607         154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNF-TEESKDICRL  232 (277)
T ss_pred             cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccC-CHHHHHHHHH
Confidence            4578899999999888889999999999999999999999865321    1111111111111111223 3779999999


Q ss_pred             hcCCCCCCCCCHhhH
Q 041728           80 CLNGNPESRLIITLT   94 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l   94 (108)
                      ||+.||.+||++.++
T Consensus       233 ~L~~~P~~R~~~~~~  247 (277)
T cd05607         233 FLAKKPEDRLGSREK  247 (277)
T ss_pred             HhccCHhhCCCCccc
Confidence            999999999999654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.66  E-value=2.3e-16  Score=91.52  Aligned_cols=88  Identities=16%  Similarity=0.160  Sum_probs=63.0

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhC-CCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKG-KHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..+++.|++||.+... .++.++|+||+|+++|++++| ..|+............... .. . +......+.+++..||
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~-~~-~-~~~~~~~~~~li~~~l  240 (258)
T cd05078         164 LLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDR-HQ-L-PAPKWTELANLINQCM  240 (258)
T ss_pred             ccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHcc-cc-C-CCCCcHHHHHHHHHHh
Confidence            4577889999998763 467889999999999999997 4666544333222211111 11 1 1112266899999999


Q ss_pred             CCCCCCCCCHhhH
Q 041728           82 NGNPESRLIITLT   94 (108)
Q Consensus        82 ~~~p~~Rp~~~~l   94 (108)
                      +.+|++||+++++
T Consensus       241 ~~~p~~Rps~~~i  253 (258)
T cd05078         241 DYEPDFRPSFRAI  253 (258)
T ss_pred             ccChhhCCCHHHH
Confidence            9999999999998

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.66  E-value=1e-16  Score=95.74  Aligned_cols=86  Identities=16%  Similarity=0.087  Sum_probs=66.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|+.||.+...............  ..+.....++.+++.+||..
T Consensus       161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~  238 (324)
T cd05587         161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV--SYPKSLSKEAVSICKGLLTK  238 (324)
T ss_pred             ecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhc
Confidence            4689999999999888888999999999999999999999986654333332222111  11222346789999999999


Q ss_pred             CCCCCCCH
Q 041728           84 NPESRLII   91 (108)
Q Consensus        84 ~p~~Rp~~   91 (108)
                      +|.+|++.
T Consensus       239 ~P~~R~~~  246 (324)
T cd05587         239 HPAKRLGC  246 (324)
T ss_pred             CHHHcCCC
Confidence            99999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.66  E-value=1.5e-16  Score=93.52  Aligned_cols=99  Identities=14%  Similarity=0.042  Sum_probs=70.4

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch-----hHHhhhhcCCCCCcCCCC-----CCCchHH
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF-----FLQFQLHLPIPLDEMLDP-----RLPPDPL   73 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-----~~~~~~~   73 (108)
                      ..++..|++||.+....++.++|+|++|+++|++++|..|+....     ..................     ......+
T Consensus       163 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (287)
T cd06621         163 FTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEF  242 (287)
T ss_pred             ccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHH
Confidence            346778999999888888899999999999999999999987552     112111111111111110     1123568


Q ss_pred             HHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           74 FDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        74 ~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      .+++..||..+|.+||++.++..+.++..
T Consensus       243 ~~li~~~l~~~p~~Rpt~~eil~~~~~~~  271 (287)
T cd06621         243 KDFIKQCLEKDPTRRPTPWDMLEHPWIKA  271 (287)
T ss_pred             HHHHHHHcCCCcccCCCHHHHHhCccccc
Confidence            99999999999999999999977666644

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.66  E-value=1.6e-16  Score=94.88  Aligned_cols=87  Identities=14%  Similarity=0.076  Sum_probs=67.2

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||.+.........+......  .+.....++.+++.+|++
T Consensus       160 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~~l~  237 (323)
T cd05616         160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA--YPKSMSKEAVAICKGLMT  237 (323)
T ss_pred             cCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCCcCCHHHHHHHHHHcc
Confidence            356899999999999888999999999999999999999999876544433322222111  122233779999999999


Q ss_pred             CCCCCCCCH
Q 041728           83 GNPESRLII   91 (108)
Q Consensus        83 ~~p~~Rp~~   91 (108)
                      .+|.+|++.
T Consensus       238 ~~p~~R~~~  246 (323)
T cd05616         238 KHPGKRLGC  246 (323)
T ss_pred             cCHHhcCCC
Confidence            999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.66  E-value=1.7e-16  Score=91.52  Aligned_cols=93  Identities=19%  Similarity=0.178  Sum_probs=70.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|++||......++.++|+|++|++++++++|..|+....................... .+..+.+++..||..
T Consensus       163 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~l~~  241 (258)
T cd08215         163 VVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQ-YSSELRNLVSSLLQK  241 (258)
T ss_pred             eeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHHcCC
Confidence            4577889999998878888999999999999999999999876654443332222222222222 337799999999999


Q ss_pred             CCCCCCCHhhHHHH
Q 041728           84 NPESRLIITLTDGL   97 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l   97 (108)
                      +|++||++.+++.+
T Consensus       242 ~p~~Rp~~~~ll~~  255 (258)
T cd08215         242 DPEERPSIAQILQS  255 (258)
T ss_pred             ChhhCcCHHHHhcC
Confidence            99999999998543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=1e-16  Score=94.19  Aligned_cols=95  Identities=16%  Similarity=0.066  Sum_probs=68.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHh---hh-hcCCCCCcCCCCCCCchHHHHHHhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQF---QL-HLPIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ..|++.|++||.+....++.++|+||+|+++|++++|..||.+......   .. ..... ....... .+..+.+++..
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~li~~  238 (285)
T cd05605         161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKED-QEEYSEK-FSEAARSICRQ  238 (285)
T ss_pred             ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhc-ccccCcc-cCHHHHHHHHH
Confidence            4678999999999888888999999999999999999999976532111   11 11111 1111122 23678999999


Q ss_pred             hcCCCCCCCC-----CHhhHHHHHHH
Q 041728           80 CLNGNPESRL-----IITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp-----~~~~l~~l~~l  100 (108)
                      ||..||.+||     +++++..+.++
T Consensus       239 ~l~~~P~~R~~~~~~~~~~l~~~~~~  264 (285)
T cd05605         239 LLTKDPGFRLGCRGEGAEEVKAHPFF  264 (285)
T ss_pred             HccCCHHHhcCCCCCCHHHHhcCcCc
Confidence            9999999999     77777544433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.66  E-value=2.9e-16  Score=92.29  Aligned_cols=95  Identities=14%  Similarity=0.106  Sum_probs=68.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh----hcCCCCCcCCCCCCCchHHHHHHhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL----HLPIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ..|+..|++||.+.+..++.++|+||+|+++|++++|..||..........    ..... .....+.. +..+.+++..
T Consensus       161 ~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~li~~  238 (285)
T cd05632         161 RVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET-EEVYSAKF-SEEAKSICKM  238 (285)
T ss_pred             CCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc-ccccCccC-CHHHHHHHHH
Confidence            467899999999988888899999999999999999999997654322111    11111 11112223 3668999999


Q ss_pred             hcCCCCCCCCC-----HhhHHHHHHH
Q 041728           80 CLNGNPESRLI-----ITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~-----~~~l~~l~~l  100 (108)
                      ||+.+|++||+     ++++..+.++
T Consensus       239 ~l~~~P~~R~~~~~~~~~~l~~~~~~  264 (285)
T cd05632         239 LLTKDPKQRLGCQEEGAGEVKRHPFF  264 (285)
T ss_pred             HccCCHhHcCCCcccChHHHHcChhh
Confidence            99999999999     5666555444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.66  E-value=9e-17  Score=95.14  Aligned_cols=99  Identities=16%  Similarity=0.122  Sum_probs=67.3

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHh----hhh-cCCCC-----------------
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQF----QLH-LPIPL-----------------   60 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~-----------------   60 (108)
                      ..+++.|+|||.+.. ..++.++|+||+|+++|++++|..||.+......    ... .....                 
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (303)
T cd07869         163 EVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPER  242 (303)
T ss_pred             CcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccccc
Confidence            457889999998865 4577889999999999999999999976432211    000 00000                 


Q ss_pred             CcCCCC---------CCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           61 DEMLDP---------RLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        61 ~~~~~~---------~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      .....+         ......+.+++.+|++.||.+|+++.+++.++++..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~  293 (303)
T cd07869         243 FTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSD  293 (303)
T ss_pred             ccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCccccc
Confidence            000000         001145789999999999999999999976666543

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.66  E-value=1.6e-16  Score=96.81  Aligned_cols=98  Identities=13%  Similarity=0.018  Sum_probs=68.8

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcC--CCCCcCCCCCCCchHHHHHHhh-
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP--IPLDEMLDPRLPPDPLFDVAFS-   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~-   79 (108)
                      +.+||+.|+|||.+....++.++|+||+|+++|++++|..||.............  ..............++.+++.+ 
T Consensus       207 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~l  286 (381)
T cd05626         207 SLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKL  286 (381)
T ss_pred             cccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHH
Confidence            3579999999999988888999999999999999999999997655433222111  1111111111123678889887 


Q ss_pred             -hcCCCCCCCCCHhhHHHHHHH
Q 041728           80 -CLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        80 -c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                       |+..++..|+++.+++.+.++
T Consensus       287 l~~~~~~~~R~~~~~~l~hp~f  308 (381)
T cd05626         287 CCSAEERLGRNGADDIKAHPFF  308 (381)
T ss_pred             ccCcccccCCCCHHHHhcCccc
Confidence             555666679999999665554

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.66  E-value=7.7e-17  Score=94.65  Aligned_cols=92  Identities=11%  Similarity=0.027  Sum_probs=65.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh----hcC----CCCC-------c------
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL----HLP----IPLD-------E------   62 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~-------~------   62 (108)
                      ..|+..|+|||.+.+..++.++|+||+|++++++++|..+|..........    ...    ....       .      
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (288)
T cd07863         167 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRG  246 (288)
T ss_pred             ccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCC
Confidence            457888999999988888999999999999999999998886543221111    000    0000       0      


Q ss_pred             -----CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHH
Q 041728           63 -----MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDG   96 (108)
Q Consensus        63 -----~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~   96 (108)
                           ...+.+. ..+.+++.+|++.||.+||++.++..
T Consensus       247 ~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         247 PRPVQSVVPEIE-ESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             CCchHHhCcCcC-HHHHHHHHHHhccCcccCCCHHHHhc
Confidence                 0001222 55889999999999999999998853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.66  E-value=4.2e-16  Score=91.99  Aligned_cols=92  Identities=24%  Similarity=0.253  Sum_probs=64.7

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh--CCCCCCcchhHHhhhhc------CCCCCcCCCCCCCchHHHHHH
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK--GKHPRDQMFFLQFQLHL------PIPLDEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~   77 (108)
                      +++.|++||......++.++|+||+|+++|++++  +..|+............      .........+...+..+.+++
T Consensus       194 ~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  273 (296)
T cd05095         194 LPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLM  273 (296)
T ss_pred             CccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHH
Confidence            3567999998877888999999999999999987  67777654332221110      000111111222337799999


Q ss_pred             hhhcCCCCCCCCCHhhH-HHH
Q 041728           78 FSCLNGNPESRLIITLT-DGL   97 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l-~~l   97 (108)
                      ..||+.+|.+||++.+| ..|
T Consensus       274 ~~cl~~~p~~Rp~~~~i~~~l  294 (296)
T cd05095         274 LSCWRRNAKERPSFQEIHATL  294 (296)
T ss_pred             HHHcCCCcccCCCHHHHHHHH
Confidence            99999999999999999 444

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.66  E-value=1.8e-16  Score=92.30  Aligned_cols=93  Identities=13%  Similarity=0.131  Sum_probs=65.1

Q ss_pred             cccccceecccccccCC--CcccccchhhhHHHHHHHhCCCCCCcchhHHhhh-hcC-CCCCcCCCCCCCchHHHHHHhh
Q 041728            4 ILLEFMNFFEGLAYTIK--ITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL-HLP-IPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~--~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ..|++.|++||.+....  ++.++|+||+|+++|++++|..|+.......... ... ....... +.....++.+++..
T Consensus       169 ~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  247 (268)
T cd06624         169 FTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEI-PESLSAEAKNFILR  247 (268)
T ss_pred             CCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCC-CcccCHHHHHHHHH
Confidence            34788999999886533  6788999999999999999999987543211111 110 0111111 22233679999999


Q ss_pred             hcCCCCCCCCCHhhHHHH
Q 041728           80 CLNGNPESRLIITLTDGL   97 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l   97 (108)
                      ||..+|.+||++.++..+
T Consensus       248 ~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         248 CFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             HcCCCchhCCCHHHHHhC
Confidence            999999999999998543

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=3.5e-16  Score=90.62  Aligned_cols=93  Identities=14%  Similarity=0.140  Sum_probs=67.1

Q ss_pred             cccccceecccccccC---CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC---CCcCCCCCCCchHHHHHH
Q 041728            4 ILLEFMNFFEGLAYTI---KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP---LDEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~---~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~   77 (108)
                      ..++..|++||.+...   .++.++|+|++|+++|++++|..|+...............   ......+...+..+.+++
T Consensus       161 ~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  240 (262)
T cd06613         161 FIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFI  240 (262)
T ss_pred             ccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHH
Confidence            4567789999998765   7788999999999999999999998766543333221111   111111111125689999


Q ss_pred             hhhcCCCCCCCCCHhhHHH
Q 041728           78 FSCLNGNPESRLIITLTDG   96 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~~   96 (108)
                      ..||..+|..||++++|+.
T Consensus       241 ~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         241 KKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             HHHcCCChhhCCCHHHHhc
Confidence            9999999999999999843

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.66  E-value=2e-16  Score=96.06  Aligned_cols=98  Identities=11%  Similarity=0.007  Sum_probs=71.0

Q ss_pred             ccccccceecccccccC----CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCC--CCchHHHHH
Q 041728            3 DILLEFMNFFEGLAYTI----KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPR--LPPDPLFDV   76 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~----~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l   76 (108)
                      ...||+.|+|||.+...    .++.++|+||+|+++|++++|..||...........+.........+.  ..+..+.++
T Consensus       202 ~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  281 (370)
T cd05596         202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDL  281 (370)
T ss_pred             CCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHH
Confidence            35689999999988642    367899999999999999999999987655443333222111111121  223779999


Q ss_pred             HhhhcCCCCCC--CCCHhhHHHHHHH
Q 041728           77 AFSCLNGNPES--RLIITLTDGLKRL  100 (108)
Q Consensus        77 ~~~c~~~~p~~--Rp~~~~l~~l~~l  100 (108)
                      +..|+..+|.+  |++++++..+.++
T Consensus       282 i~~~L~~~p~r~~R~s~~ell~h~~~  307 (370)
T cd05596         282 ICAFLTDREVRLGRNGVDEIKSHPFF  307 (370)
T ss_pred             HHHHccChhhccCCCCHHHHhcCccc
Confidence            99999998987  9999999665554

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.66  E-value=6.7e-16  Score=90.00  Aligned_cols=90  Identities=20%  Similarity=0.242  Sum_probs=62.0

Q ss_pred             ccccceecccccccC-------CCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhh-cCCCCCcCCCCC---CCchH
Q 041728            5 LLEFMNFFEGLAYTI-------KITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLH-LPIPLDEMLDPR---LPPDP   72 (108)
Q Consensus         5 ~~~~~~~ape~~~~~-------~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~   72 (108)
                      .++..|+|||.+...       .++.++|+||+|+++|++++ |..||........... ..........+.   ..+..
T Consensus       163 ~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (269)
T cd05087         163 WVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDR  242 (269)
T ss_pred             CCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChH
Confidence            466789999987532       34678999999999999996 9989876543332221 111112222221   22366


Q ss_pred             HHHHHhhhcCCCCCCCCCHhhHH
Q 041728           73 LFDVAFSCLNGNPESRLIITLTD   95 (108)
Q Consensus        73 ~~~l~~~c~~~~p~~Rp~~~~l~   95 (108)
                      +.+++..|| .+|++||++++|.
T Consensus       243 ~~~l~~~c~-~~P~~Rpt~~~l~  264 (269)
T cd05087         243 WYEVMQFCW-LQPEQRPSAEEVH  264 (269)
T ss_pred             HHHHHHHHh-cCcccCCCHHHHH
Confidence            889999999 5899999999993

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.66  E-value=1.6e-16  Score=94.99  Aligned_cols=89  Identities=11%  Similarity=0.021  Sum_probs=68.2

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||.+............... ...+.++ ..+.+++.+|++
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~-~~~~~li~~~l~  232 (325)
T cd05602         155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL-QLKPNIT-NSARHLLEGLLQ  232 (325)
T ss_pred             cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc-CCCCCCC-HHHHHHHHHHcc
Confidence            35689999999999888889999999999999999999999986654443332222111 1223333 679999999999


Q ss_pred             CCCCCCCCHhh
Q 041728           83 GNPESRLIITL   93 (108)
Q Consensus        83 ~~p~~Rp~~~~   93 (108)
                      .+|.+|+++.+
T Consensus       233 ~~p~~R~~~~~  243 (325)
T cd05602         233 KDRTKRLGAKD  243 (325)
T ss_pred             cCHHHCCCCCC
Confidence            99999998764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.66  E-value=4e-16  Score=91.80  Aligned_cols=93  Identities=20%  Similarity=0.138  Sum_probs=67.2

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||.+....++.++|+||+|++++++++ +..|+......+............. +...+..+.+++..||+.+
T Consensus       183 ~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~  261 (288)
T cd05061         183 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFN  261 (288)
T ss_pred             ccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCC
Confidence            4567999999888888899999999999999998 7888876543333222211111111 2222367999999999999


Q ss_pred             CCCCCCHhhH-HHHHH
Q 041728           85 PESRLIITLT-DGLKR   99 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~   99 (108)
                      |.+||++.++ ..+..
T Consensus       262 p~~Rps~~~ll~~l~~  277 (288)
T cd05061         262 PKMRPTFLEIVNLLKD  277 (288)
T ss_pred             hhHCcCHHHHHHHHHh
Confidence            9999999998 44443

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.66  E-value=7.1e-16  Score=90.54  Aligned_cols=97  Identities=19%  Similarity=0.094  Sum_probs=68.1

Q ss_pred             cccccceecccccccCC------CcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---hcCCCCCcCCCCCCCchHHH
Q 041728            4 ILLEFMNFFEGLAYTIK------ITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---HLPIPLDEMLDPRLPPDPLF   74 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~------~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~   74 (108)
                      ..+++.|++||.+....      ++.++|+|++|+++|++++|..||..........   ...........+. .+..+.
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  239 (286)
T cd06622         161 NIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSG-YSDDAQ  239 (286)
T ss_pred             CCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcc-cCHHHH
Confidence            35777899999885433      4678999999999999999999986543222111   1111111222223 337799


Q ss_pred             HHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           75 DVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        75 ~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      +++..||+.+|.+||+++++...+++.
T Consensus       240 ~li~~~l~~~p~~Rp~~~~l~~~~~~~  266 (286)
T cd06622         240 DFVAKCLNKIPNRRPTYAQLLEHPWLV  266 (286)
T ss_pred             HHHHHHcccCcccCCCHHHHhcChhhh
Confidence            999999999999999999996555553

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=2.7e-17  Score=98.41  Aligned_cols=95  Identities=20%  Similarity=0.091  Sum_probs=68.0

Q ss_pred             ccccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ...||+.|+|||.+... .++.++|+||+|+++|++++|..||........................ +..+.+++..||
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~li~~~L  233 (330)
T cd05586         155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVL-SDEGRQFVKGLL  233 (330)
T ss_pred             CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccC-CHHHHHHHHHHc
Confidence            35689999999998754 4788999999999999999999999766544333322222222222223 377899999999


Q ss_pred             CCCCCCCCC----HhhHHHHH
Q 041728           82 NGNPESRLI----ITLTDGLK   98 (108)
Q Consensus        82 ~~~p~~Rp~----~~~l~~l~   98 (108)
                      ..+|.+|++    +.++..+.
T Consensus       234 ~~~P~~R~~~~~~~~~ll~h~  254 (330)
T cd05586         234 NRNPQHRLGAHRDAVELKEHP  254 (330)
T ss_pred             CCCHHHCCCCCCCHHHHhcCc
Confidence            999999984    55554433

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.65  E-value=1.7e-16  Score=94.73  Aligned_cols=87  Identities=11%  Similarity=0.020  Sum_probs=67.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|..||.................. ..+.. +..+.+++.+|++.
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~-~~~~~~li~~~l~~  233 (323)
T cd05575         156 FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLR-LKPNI-SVSARHLLEGLLQK  233 (323)
T ss_pred             ccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCC-CCCCC-CHHHHHHHHHHhhc
Confidence            56899999999998888889999999999999999999999866544333322222111 22333 37799999999999


Q ss_pred             CCCCCCCHh
Q 041728           84 NPESRLIIT   92 (108)
Q Consensus        84 ~p~~Rp~~~   92 (108)
                      +|.+||++.
T Consensus       234 ~p~~R~~~~  242 (323)
T cd05575         234 DRTKRLGAK  242 (323)
T ss_pred             CHHhCCCCC
Confidence            999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.65  E-value=7.5e-16  Score=90.90  Aligned_cols=90  Identities=19%  Similarity=0.187  Sum_probs=63.6

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh--CCCCCCcchhHHhhhhc----C--CCCCcCCCCCCCchHHHHHH
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK--GKHPRDQMFFLQFQLHL----P--IPLDEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~--~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~l~   77 (108)
                      ++..|+|||.+....++.++|+||+|++++++++  +..||............    .  ........+...+..+.+++
T Consensus       193 ~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  272 (295)
T cd05097         193 LPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLM  272 (295)
T ss_pred             CceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHH
Confidence            4668999999888888999999999999999987  56677654322211110    0  01011111222337799999


Q ss_pred             hhhcCCCCCCCCCHhhHH
Q 041728           78 FSCLNGNPESRLIITLTD   95 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~   95 (108)
                      .+||..+|++||++++|.
T Consensus       273 ~~~l~~~p~~RPs~~~i~  290 (295)
T cd05097         273 MRCWSRDIKDRPTFNKIH  290 (295)
T ss_pred             HHHcCCCchhCcCHHHHH
Confidence            999999999999999993

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.65  E-value=4.3e-16  Score=90.63  Aligned_cols=92  Identities=11%  Similarity=0.062  Sum_probs=64.3

Q ss_pred             cccccceecccccc---cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCc---CCCCCCCchHHHHHH
Q 041728            4 ILLEFMNFFEGLAY---TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDE---MLDPRLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~~~~~~ape~~~---~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~   77 (108)
                      ..|+..|++||.+.   ...++.++|+||+|++++++++|..|+..................   .......+..+.+++
T Consensus       166 ~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  245 (267)
T cd06646         166 FIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFV  245 (267)
T ss_pred             cccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHH
Confidence            45778999999874   344677899999999999999999988655433322211111111   111111236799999


Q ss_pred             hhhcCCCCCCCCCHhhHH
Q 041728           78 FSCLNGNPESRLIITLTD   95 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~   95 (108)
                      ..||..+|++||++++++
T Consensus       246 ~~~l~~~P~~Rp~~~~il  263 (267)
T cd06646         246 KISLTKNPKKRPTAERLL  263 (267)
T ss_pred             HHHhhCChhhCcCHHHHh
Confidence            999999999999999884

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.65  E-value=2.4e-16  Score=103.33  Aligned_cols=94  Identities=15%  Similarity=0.011  Sum_probs=66.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH-HhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL-QFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..||+.|||||++....++.++||||+||++||++++..|+...... .......  .....  ........+++..||.
T Consensus       175 ~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~L~  250 (793)
T PLN00181        175 AMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRV--LPPQI--LLNWPKEASFCLWLLH  250 (793)
T ss_pred             cCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhh--cChhh--hhcCHHHHHHHHHhCC
Confidence            35788999999998888999999999999999999988776533211 1111100  00000  0112346788899999


Q ss_pred             CCCCCCCCHhhHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .+|.+||++.+++.+.++.
T Consensus       251 ~~P~~Rps~~eil~h~~~~  269 (793)
T PLN00181        251 PEPSCRPSMSELLQSEFIN  269 (793)
T ss_pred             CChhhCcChHHHhhchhhh
Confidence            9999999999997666654

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.65  E-value=2.3e-17  Score=98.52  Aligned_cols=94  Identities=14%  Similarity=0.022  Sum_probs=70.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|..||.+................  .+.....++.+++.+||..
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~  233 (325)
T cd05594         156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLSPEAKSLLSGLLKK  233 (325)
T ss_pred             ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCC--CCCCCCHHHHHHHHHHhhc
Confidence            46899999999998888899999999999999999999999766543332222111111  1222347799999999999


Q ss_pred             CCCCCC-----CHhhHHHHHH
Q 041728           84 NPESRL-----IITLTDGLKR   99 (108)
Q Consensus        84 ~p~~Rp-----~~~~l~~l~~   99 (108)
                      ||.+|+     ++.++..+.+
T Consensus       234 dP~~R~~~~~~~~~~il~h~~  254 (325)
T cd05594         234 DPKQRLGGGPDDAKEIMQHKF  254 (325)
T ss_pred             CHHHhCCCCCCCHHHHhcCCC
Confidence            999997     7777754443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.65  E-value=2.6e-16  Score=92.57  Aligned_cols=97  Identities=15%  Similarity=0.046  Sum_probs=69.5

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH---HhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL---QFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ..|+..|+|||.+.+..++.++|+||+|+++|++++|..||......   .............. +......+.+++..|
T Consensus       161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~  239 (285)
T cd05630         161 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEY-SEKFSPDARSLCKML  239 (285)
T ss_pred             CCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhc-CccCCHHHHHHHHHH
Confidence            46889999999998888999999999999999999999999753211   11111101111111 222236689999999


Q ss_pred             cCCCCCCCCC-----HhhHHHHHHHH
Q 041728           81 LNGNPESRLI-----ITLTDGLKRLA  101 (108)
Q Consensus        81 ~~~~p~~Rp~-----~~~l~~l~~l~  101 (108)
                      |+.+|.+|++     ++++..+.++.
T Consensus       240 l~~~p~~R~s~~~~~~~~~~~h~~~~  265 (285)
T cd05630         240 LCKDPKERLGCQGGGAREVKEHPLFK  265 (285)
T ss_pred             hhcCHHHccCCCCCchHHHHcChhhh
Confidence            9999999999     77886656554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.65  E-value=6.7e-16  Score=91.13  Aligned_cols=97  Identities=11%  Similarity=0.013  Sum_probs=67.4

Q ss_pred             ccccceecccccccCC----CcccccchhhhHHHHHHHhCCCCCCcchh-HHhhhh-cCCCCCcCCCCCCCchHHHHHHh
Q 041728            5 LLEFMNFFEGLAYTIK----ITEKYDVYSFGVLVLEVIKGKHPRDQMFF-LQFQLH-LPIPLDEMLDPRLPPDPLFDVAF   78 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~----~~~~~di~s~g~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~   78 (108)
                      .++..|++||.+....    ++.++|+||+|+++|++++|..||..... ...... ..............+..+.+++.
T Consensus       175 ~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  254 (296)
T cd06618         175 AGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVD  254 (296)
T ss_pred             CCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHH
Confidence            3667899999886443    67889999999999999999999875322 111111 11111111111122367999999


Q ss_pred             hhcCCCCCCCCCHhhHHHHHHHH
Q 041728           79 SCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        79 ~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .||..+|.+||+++++..++++.
T Consensus       255 ~~l~~~p~~Rp~~~~il~~~~~~  277 (296)
T cd06618         255 LCLTKDHRKRPKYRELLQHPFIR  277 (296)
T ss_pred             HHccCChhhCCCHHHHhcChhhh
Confidence            99999999999999996655543

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.65  E-value=2.8e-16  Score=91.65  Aligned_cols=93  Identities=17%  Similarity=0.204  Sum_probs=66.3

Q ss_pred             cccccceecccccccCC--CcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcC-CCCC----cCCCCCCCchHHHHH
Q 041728            4 ILLEFMNFFEGLAYTIK--ITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP-IPLD----EMLDPRLPPDPLFDV   76 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~--~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~l   76 (108)
                      ..|+..|++||.+....  ++.++|+|++|++++++++|..|+............. ....    ....+.++ ..+.++
T Consensus       170 ~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l  248 (272)
T cd06629         170 MQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLS-PVALDF  248 (272)
T ss_pred             ccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCC-HHHHHH
Confidence            35778899999887544  6788999999999999999999986554332222111 1111    11112223 679999


Q ss_pred             HhhhcCCCCCCCCCHhhHHHH
Q 041728           77 AFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                      +..||..+|..||++++|+.+
T Consensus       249 i~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         249 LNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             HHHHhcCChhhCCCHHHHhhC
Confidence            999999999999999998544

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.65  E-value=1.1e-16  Score=95.83  Aligned_cols=87  Identities=20%  Similarity=0.117  Sum_probs=62.7

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch--------hHHhhh-hcCCCCCcCCCCCCCchHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF--------FLQFQL-HLPIPLDEMLDPRLPPDPL   73 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~   73 (108)
                      ...||+.|+|||.+.+..++.++|+||+|+++|++++|..||....        ...... .......  ..|......+
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--~~p~~~~~~~  232 (329)
T cd05618         155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--RIPRSLSVKA  232 (329)
T ss_pred             cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC--CCCCCCCHHH
Confidence            3568999999999988888899999999999999999999985211        011111 1111111  1122233678


Q ss_pred             HHHHhhhcCCCCCCCCCH
Q 041728           74 FDVAFSCLNGNPESRLII   91 (108)
Q Consensus        74 ~~l~~~c~~~~p~~Rp~~   91 (108)
                      .+++.+||..||.+|+++
T Consensus       233 ~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         233 ASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             HHHHHHHhcCCHHHcCCC
Confidence            999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.65  E-value=1.4e-16  Score=95.27  Aligned_cols=92  Identities=18%  Similarity=0.240  Sum_probs=69.1

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcC-CCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEM-LDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~c~   81 (108)
                      +.||++.|||||++....|+.++|+||.|+++|++++|+.||+...+.+...++.....-. ..+........+++...+
T Consensus       173 tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll  252 (429)
T KOG0595|consen  173 TLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLL  252 (429)
T ss_pred             HhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHH
Confidence            5799999999999999999999999999999999999999999877666555433332111 112222244667777778


Q ss_pred             CCCCCCCCCHhhH
Q 041728           82 NGNPESRLIITLT   94 (108)
Q Consensus        82 ~~~p~~Rp~~~~l   94 (108)
                      +.++..|-++.+-
T Consensus       253 ~~~~~~~~~~~~~  265 (429)
T KOG0595|consen  253 QRNPKDRISFEDF  265 (429)
T ss_pred             hcCccccCchHHh
Confidence            8888888776654

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.65  E-value=2.1e-16  Score=91.25  Aligned_cols=92  Identities=14%  Similarity=0.037  Sum_probs=69.4

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      .++..|++||.+....++.++|+|++|++++++++|..|+....................... ....+.+++.+||..+
T Consensus       162 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~  240 (256)
T cd08530         162 IGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPI-YSQDLQNFIRSMLQVK  240 (256)
T ss_pred             cCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchh-hCHHHHHHHHHHcCCC
Confidence            477889999999888888899999999999999999999976654332222222222222222 2367999999999999


Q ss_pred             CCCCCCHhhHHHH
Q 041728           85 PESRLIITLTDGL   97 (108)
Q Consensus        85 p~~Rp~~~~l~~l   97 (108)
                      |.+||++.++..+
T Consensus       241 p~~Rp~~~~~l~~  253 (256)
T cd08530         241 PKLRPNCDKILAS  253 (256)
T ss_pred             cccCCCHHHHhcC
Confidence            9999999998543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.65  E-value=3.7e-16  Score=90.92  Aligned_cols=93  Identities=11%  Similarity=0.077  Sum_probs=64.4

Q ss_pred             cccccceecccccc---cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc-CCCC--CcCCCCCCCchHHHHHH
Q 041728            4 ILLEFMNFFEGLAY---TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL-PIPL--DEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~~~~~~ape~~~---~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~l~   77 (108)
                      ..|+..|+|||.+.   ...++.++|+||+|+++|++++|..|+............ ....  .......-.+..+.+++
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  245 (267)
T cd06645         166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFV  245 (267)
T ss_pred             ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHH
Confidence            46888999999874   345778999999999999999999988654432222111 1110  11111111225688999


Q ss_pred             hhhcCCCCCCCCCHhhHHH
Q 041728           78 FSCLNGNPESRLIITLTDG   96 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~~   96 (108)
                      .+||..+|++||++++|..
T Consensus       246 ~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         246 KMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             HHHccCCchhCcCHHHHhc
Confidence            9999999999999998843

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.65  E-value=2.5e-16  Score=90.46  Aligned_cols=93  Identities=18%  Similarity=0.206  Sum_probs=68.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcC-CCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP-IPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..++..|++||.+....++.++|+|++|++++++++|..|+............. ........+...+..+.+++..||.
T Consensus       157 ~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  236 (253)
T cd05122         157 MVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQ  236 (253)
T ss_pred             eecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHcc
Confidence            457788999999887778889999999999999999999987664333332211 1112222222224679999999999


Q ss_pred             CCCCCCCCHhhHHH
Q 041728           83 GNPESRLIITLTDG   96 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~   96 (108)
                      .+|.+||++.++..
T Consensus       237 ~~p~~R~t~~~~l~  250 (253)
T cd05122         237 KNPEKRPTAEQLLK  250 (253)
T ss_pred             CChhhCCCHHHHhc
Confidence            99999999998853

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.65  E-value=5.3e-16  Score=90.87  Aligned_cols=98  Identities=16%  Similarity=0.081  Sum_probs=68.4

Q ss_pred             cccccceeccccccc----CCCcccccchhhhHHHHHHHhCCCCCCcch-hHHhhh-hcCCCCCcCCCCCCCchHHHHHH
Q 041728            4 ILLEFMNFFEGLAYT----IKITEKYDVYSFGVLVLEVIKGKHPRDQMF-FLQFQL-HLPIPLDEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~~~~~~ape~~~~----~~~~~~~di~s~g~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~   77 (108)
                      ..|+..|++||.+..    ..++.++|+|++|+++|++++|..|+.... ...... ..............+ .++.+++
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li  241 (283)
T cd06617         163 DAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFS-PEFQDFV  241 (283)
T ss_pred             ccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccC-HHHHHHH
Confidence            457788999998754    345778999999999999999999986432 111111 111111122222233 6799999


Q ss_pred             hhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           78 FSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ..||..+|.+||+++++..+.++..
T Consensus       242 ~~~l~~~p~~Rp~~~~il~~~~~~~  266 (283)
T cd06617         242 NKCLKKNYKERPNYPELLQHPFFEL  266 (283)
T ss_pred             HHHccCChhhCcCHHHHhcCchhhh
Confidence            9999999999999999966666544

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.65  E-value=3.3e-16  Score=95.77  Aligned_cols=98  Identities=11%  Similarity=-0.113  Sum_probs=68.5

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH------Hhhh-hcC-------------------
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL------QFQL-HLP-------------------   57 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~------~~~~-~~~-------------------   57 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|..||.+....      ..+. ...                   
T Consensus       247 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~  326 (392)
T PHA03207        247 WSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFK  326 (392)
T ss_pred             cccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHH
Confidence            46899999999998888999999999999999999999998653210      0000 000                   


Q ss_pred             ---CC-CCcCC-----CCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           58 ---IP-LDEML-----DPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        58 ---~~-~~~~~-----~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                         .. .....     ........+.+++.+|+..+|.+||++.+++.+.++.
T Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~  379 (392)
T PHA03207        327 QYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFT  379 (392)
T ss_pred             hhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhh
Confidence               00 00000     0011124578899999999999999999997666654

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.64  E-value=4.5e-16  Score=94.58  Aligned_cols=101  Identities=15%  Similarity=0.050  Sum_probs=79.7

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCC--chHHHHHHhh
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLP--PDPLFDVAFS   79 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~   79 (108)
                      ...+||+.|+|||++....|+..+|+||.|+++|.++.|.+||.+.........+.........+..+  ...+.+++..
T Consensus       196 ~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~  275 (382)
T KOG0032|consen  196 HTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRK  275 (382)
T ss_pred             eeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHH
Confidence            35789999999999998999999999999999999999999998776444444333333333333222  2668999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ++..||..|+++.+++++.+|..
T Consensus       276 ll~~dp~~R~ta~~~L~HpWi~~  298 (382)
T KOG0032|consen  276 LLEFDPRKRLTAAQALQHPWIKS  298 (382)
T ss_pred             hcccCcccCCCHHHHhcCccccC
Confidence            99999999999999977776653

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=1.9e-16  Score=95.84  Aligned_cols=95  Identities=13%  Similarity=-0.042  Sum_probs=68.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCC--CcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPL--DEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      .+||+.|+|||.+....++.++|+||+|+++|++++|..||................  .........+..+.+++.+|+
T Consensus       199 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll  278 (364)
T cd05599         199 TVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLC  278 (364)
T ss_pred             cccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHc
Confidence            469999999999988889999999999999999999999998765443332211111  111111112367889999998


Q ss_pred             CCCCCCCCC---HhhHHHHHH
Q 041728           82 NGNPESRLI---ITLTDGLKR   99 (108)
Q Consensus        82 ~~~p~~Rp~---~~~l~~l~~   99 (108)
                      . +|.+|++   +.+++.+.+
T Consensus       279 ~-~p~~R~~~~~~~~ll~h~~  298 (364)
T cd05599         279 C-EAERRLGNNGVNEIKSHPF  298 (364)
T ss_pred             c-CHhhcCCCCCHHHHhcCCC
Confidence            6 8999998   887755444

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.64  E-value=1.4e-16  Score=95.44  Aligned_cols=93  Identities=15%  Similarity=0.095  Sum_probs=64.4

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchh---HHhhh-hcCCCCCcCCCCCCCchHHHHHHh
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFF---LQFQL-HLPIPLDEMLDPRLPPDPLFDVAF   78 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~   78 (108)
                      ..||+.|+|||.+... .++.++|+||+|+++|++++|..||.....   ..... ..... .... +...+..+.+++.
T Consensus       166 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~li~  243 (332)
T cd05614         166 FCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKC-DPPF-PSFIGPEAQDLLH  243 (332)
T ss_pred             ccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcC-CCCC-CCCCCHHHHHHHH
Confidence            5689999999998754 367889999999999999999999864321   11111 11111 1111 2223377999999


Q ss_pred             hhcCCCCCCCC-----CHhhHHHHH
Q 041728           79 SCLNGNPESRL-----IITLTDGLK   98 (108)
Q Consensus        79 ~c~~~~p~~Rp-----~~~~l~~l~   98 (108)
                      +||..||++|+     ++++++.+.
T Consensus       244 ~~l~~dp~~R~~~~~~~~~~~l~h~  268 (332)
T cd05614         244 KLLRKDPKKRLGAGPQGASEIKEHP  268 (332)
T ss_pred             HHcCCCHHHcCCCCCCCHHHHHcCC
Confidence            99999999999     556664433

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.64  E-value=2.3e-16  Score=96.48  Aligned_cols=99  Identities=10%  Similarity=-0.043  Sum_probs=67.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchh----------HHhhhh-c----------------
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF----------LQFQLH-L----------------   56 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~----------~~~~~~-~----------------   56 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|..|+.....          ...+.. .                
T Consensus       243 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~  322 (391)
T PHA03212        243 WAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLD  322 (391)
T ss_pred             ccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHH
Confidence            5689999999999888899999999999999999999876542110          000000 0                


Q ss_pred             ------CCC-CCcCC-CCC-----CCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           57 ------PIP-LDEML-DPR-----LPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        57 ------~~~-~~~~~-~~~-----~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                            ... ..... .+.     ..+.++.+++.+||+.||.+||++++++.+.++..
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~  381 (391)
T PHA03212        323 EIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD  381 (391)
T ss_pred             HHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence                  000 00000 000     01245889999999999999999999977777654

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.64  E-value=8e-16  Score=90.81  Aligned_cols=99  Identities=16%  Similarity=0.106  Sum_probs=71.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCC-cCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLD-EMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..|+..|++||.+....++.++|+|++|++++++++|..|+................. ........+..+.+++.+||.
T Consensus       176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  255 (292)
T cd06657         176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLV  255 (292)
T ss_pred             cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHh
Confidence            3577889999998877788899999999999999999999875543322221111111 111111123668999999999


Q ss_pred             CCCCCCCCHhhHHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      .+|.+||+++++..++++..
T Consensus       256 ~~P~~R~~~~~ll~~~~~~~  275 (292)
T cd06657         256 RDPAQRATAAELLKHPFLAK  275 (292)
T ss_pred             CCcccCcCHHHHhcChHHhc
Confidence            99999999999976666654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.64  E-value=1.2e-15  Score=89.06  Aligned_cols=90  Identities=24%  Similarity=0.269  Sum_probs=65.5

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .++..|++||.+....++.++|+||+|++++++++ |..||.....................+...+..+.+++.+||..
T Consensus       179 ~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~  258 (275)
T cd05046         179 LIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAV  258 (275)
T ss_pred             eeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCC
Confidence            35667999999887778889999999999999998 77788654333322222222112222222347799999999999


Q ss_pred             CCCCCCCHhhH
Q 041728           84 NPESRLIITLT   94 (108)
Q Consensus        84 ~p~~Rp~~~~l   94 (108)
                      +|.+||++.++
T Consensus       259 ~p~~Rp~~~~~  269 (275)
T cd05046         259 NPKDRPSFSEL  269 (275)
T ss_pred             CcccCCCHHHH
Confidence            99999999998

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.64  E-value=2.1e-16  Score=92.04  Aligned_cols=101  Identities=17%  Similarity=0.221  Sum_probs=71.5

Q ss_pred             cccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----------------CCCC---C
Q 041728            2 TDILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----------------PIPL---D   61 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~---~   61 (108)
                      |..+.|.+|.|||.+.+ ..|...+|||++||++.|+++|.+-|.+.+..+-...+                .+..   .
T Consensus       159 TDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv  238 (396)
T KOG0593|consen  159 TDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGV  238 (396)
T ss_pred             hhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeee
Confidence            34667899999999987 78999999999999999999999988876533221110                0100   1


Q ss_pred             cCCCCCCCc----------hHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           62 EMLDPRLPP----------DPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        62 ~~~~~~~~~----------~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      .+..+..+.          ....+++.+|+..||++|+++++++.+..+..
T Consensus       239 ~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  239 RLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             ecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence            111111111          33889999999999999999999866555433

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.63  E-value=9.3e-16  Score=88.58  Aligned_cols=89  Identities=25%  Similarity=0.284  Sum_probs=66.4

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      ++..|++||......++.++|+|++|++++++++ |..|+.................... +...+..+.+++.+||..+
T Consensus       166 ~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~~  244 (258)
T smart00219      166 LPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPK-PENCPPEIYKLMLQCWAED  244 (258)
T ss_pred             CcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCC-CCcCCHHHHHHHHHHCcCC
Confidence            5678999999877788899999999999999998 7888875543333332222212222 2223477999999999999


Q ss_pred             CCCCCCHhhHH
Q 041728           85 PESRLIITLTD   95 (108)
Q Consensus        85 p~~Rp~~~~l~   95 (108)
                      |.+||++.++.
T Consensus       245 p~~Rpt~~~ll  255 (258)
T smart00219      245 PEDRPTFSELV  255 (258)
T ss_pred             hhhCcCHHHHH
Confidence            99999999883

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.63  E-value=4.7e-16  Score=93.86  Aligned_cols=100  Identities=14%  Similarity=0.106  Sum_probs=70.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh-----------------------hcCCC-
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL-----------------------HLPIP-   59 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~-   59 (108)
                      ..++..|++||.+.+..++.++|+||+|++++++++|..||...+......                       ..... 
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (353)
T cd07850         177 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRP  256 (353)
T ss_pred             CcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCC
Confidence            357788999999988888999999999999999999999886443211000                       00000 


Q ss_pred             ------C----CcCCC-------CCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHHH
Q 041728           60 ------L----DEMLD-------PRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLASF  103 (108)
Q Consensus        60 ------~----~~~~~-------~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~~  103 (108)
                            .    .....       +...+..+.+++.+||+.||.+||++++++.+.++...
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~  317 (353)
T cd07850         257 KYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVW  317 (353)
T ss_pred             CCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhc
Confidence                  0    00000       11122457899999999999999999999877777643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.63  E-value=1.3e-15  Score=90.36  Aligned_cols=90  Identities=14%  Similarity=-0.024  Sum_probs=65.5

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCc-CCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDE-MLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .++..|++||.+....++.++|+||+|+++|++++|..||.+................ .......+..+.+++.+||..
T Consensus       177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  256 (305)
T cd05609         177 CGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQ  256 (305)
T ss_pred             ccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhcc
Confidence            4677899999988888889999999999999999999999765544333322111111 111112336799999999999


Q ss_pred             CCCCCCCHhhH
Q 041728           84 NPESRLIITLT   94 (108)
Q Consensus        84 ~p~~Rp~~~~l   94 (108)
                      +|++||++.++
T Consensus       257 ~P~~R~~~~~~  267 (305)
T cd05609         257 NPLERLGTGGA  267 (305)
T ss_pred             ChhhccCccCH
Confidence            99999985433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.63  E-value=5.4e-16  Score=94.00  Aligned_cols=88  Identities=16%  Similarity=0.109  Sum_probs=70.2

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      .+++|||.|+|||.+.+..|..++|+|++|+++||++.|++||++..--.....+...  ....|...+.+..++....+
T Consensus       508 kTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh--nvsyPKslSkEAv~ickg~l  585 (683)
T KOG0696|consen  508 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH--NVSYPKSLSKEAVAICKGLL  585 (683)
T ss_pred             eeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc--cCcCcccccHHHHHHHHHHh
Confidence            3699999999999999999999999999999999999999999987644433333222  22334444477889999999


Q ss_pred             CCCCCCCCCH
Q 041728           82 NGNPESRLII   91 (108)
Q Consensus        82 ~~~p~~Rp~~   91 (108)
                      .+.|.+|..+
T Consensus       586 tK~P~kRLGc  595 (683)
T KOG0696|consen  586 TKHPGKRLGC  595 (683)
T ss_pred             hcCCccccCC
Confidence            9999999765

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.63  E-value=1.7e-16  Score=93.41  Aligned_cols=93  Identities=14%  Similarity=0.094  Sum_probs=65.3

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CC-------------CCCcCC-
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PI-------------PLDEML-   64 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------------~~~~~~-   64 (108)
                      ..+++.|+|||.+.+ ..++.++|+||+|+++|++++|+.||.+..........    ..             ...... 
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (288)
T cd07871         163 EVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLF  242 (288)
T ss_pred             ceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcccc
Confidence            457889999998865 55788999999999999999999998765432211100    00             000000 


Q ss_pred             -----------CCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHH
Q 041728           65 -----------DPRLPPDPLFDVAFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        65 -----------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                                 .+.. ..+..+++..|++.||.+|+|+++++.+
T Consensus       243 ~~~~~~~~~~~~~~~-~~~~~dll~~mL~~dp~~R~t~~~~l~h  285 (288)
T cd07871         243 PQYRAQPLINHAPRL-DTDGIDLLSSLLLYETKSRISAEAALRH  285 (288)
T ss_pred             CccCCCchHHhCCCC-CHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence                       0112 2568899999999999999999998544

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.63  E-value=2.7e-16  Score=94.07  Aligned_cols=88  Identities=18%  Similarity=0.167  Sum_probs=63.7

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch------hHHhhh-hcCCCCCcCCCCCCCchHHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF------FLQFQL-HLPIPLDEMLDPRLPPDPLFD   75 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~   75 (108)
                      ..+||+.|+|||.+.+..++.++|+||+|+++|++++|..||....      ...... .....  ....|...+..+.+
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~  232 (327)
T cd05617         155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--PIRIPRFLSVKASH  232 (327)
T ss_pred             cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--CCCCCCCCCHHHHH
Confidence            3568999999999988888999999999999999999999995321      111111 11111  11112223367899


Q ss_pred             HHhhhcCCCCCCCCCHh
Q 041728           76 VAFSCLNGNPESRLIIT   92 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~   92 (108)
                      ++.+||..||.+|+++.
T Consensus       233 li~~~L~~dP~~R~~~~  249 (327)
T cd05617         233 VLKGFLNKDPKERLGCQ  249 (327)
T ss_pred             HHHHHhccCHHHcCCCC
Confidence            99999999999999853

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.63  E-value=4.1e-16  Score=94.99  Aligned_cols=95  Identities=17%  Similarity=0.109  Sum_probs=67.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCC--CcCC-CCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPL--DEML-DPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~l~~~c   80 (108)
                      .+||+.|+|||.+....++.++|+||+|+++|++++|..||................  .... ...+. .+..+++.++
T Consensus       208 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s-~~~~~li~~l  286 (382)
T cd05625         208 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLS-PEASDLIIKL  286 (382)
T ss_pred             cccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCC-HHHHHHHHHH
Confidence            579999999999988889999999999999999999999998765443332221111  1111 12233 6677888776


Q ss_pred             cCCCCCCCCC---HhhHHHHHHH
Q 041728           81 LNGNPESRLI---ITLTDGLKRL  100 (108)
Q Consensus        81 ~~~~p~~Rp~---~~~l~~l~~l  100 (108)
                      . .+|.+|++   +.++..+.++
T Consensus       287 ~-~~p~~R~~~~~~~ei~~hp~f  308 (382)
T cd05625         287 C-RGPEDRLGKNGADEIKAHPFF  308 (382)
T ss_pred             c-cCHhHcCCCCCHHHHhcCCCc
Confidence            4 58999987   7777544443

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.63  E-value=5.9e-16  Score=94.04  Aligned_cols=97  Identities=12%  Similarity=0.063  Sum_probs=68.0

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc--------------------------
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL--------------------------   56 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------   56 (108)
                      ..++..|+|||.+.+. .++.++|+||+|++++++++|+.||.+.+.......+                          
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  243 (372)
T cd07853         164 EVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRG  243 (372)
T ss_pred             CCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhC
Confidence            3568889999988763 4678899999999999999999999765432211100                          


Q ss_pred             CCCCCc-----CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           57 PIPLDE-----MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        57 ~~~~~~-----~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ......     ..... ...++.+++.+|++.||.+||++.+++.+.++.
T Consensus       244 ~~~~~~~~~~~~~~~~-~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~  292 (372)
T cd07853         244 PHKPPSLPVLYTLSSQ-ATHEAVHLLCRMLVFDPDKRISAADALAHPYLD  292 (372)
T ss_pred             CCCCCchHHhcccCCC-CCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhC
Confidence            000000     00111 136688999999999999999999997666554

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.62  E-value=8.2e-16  Score=96.11  Aligned_cols=96  Identities=21%  Similarity=0.179  Sum_probs=72.6

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHh--CCCCCCcchhHHhhhhc------CCCCCcCCCCCCCchHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK--GKHPRDQMFFLQFQLHL------PIPLDEMLDPRLPPDPLF   74 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~   74 (108)
                      .++.+..|||+|.+..++|+.++|+|+||+.+||+++  ...||.....-+.....      .....=+..|..++..++
T Consensus       698 r~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~ly  777 (807)
T KOG1094|consen  698 RAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLY  777 (807)
T ss_pred             ceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHH
Confidence            3566789999999999999999999999999999886  67788766543332211      111111224556668899


Q ss_pred             HHHhhhcCCCCCCCCCHhhH-HHHH
Q 041728           75 DVAFSCLNGNPESRLIITLT-DGLK   98 (108)
Q Consensus        75 ~l~~~c~~~~p~~Rp~~~~l-~~l~   98 (108)
                      ++|..||..+..+||+|+++ +.|.
T Consensus       778 elml~Cw~~es~~RPsFe~lh~~lq  802 (807)
T KOG1094|consen  778 ELMLRCWRRESEQRPSFEQLHLFLQ  802 (807)
T ss_pred             HHHHHHhchhhhcCCCHHHHHHHHH
Confidence            99999999999999999999 5444

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.62  E-value=4.9e-16  Score=93.42  Aligned_cols=100  Identities=13%  Similarity=0.116  Sum_probs=68.5

Q ss_pred             ccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CC-------------------
Q 041728            3 DILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PI-------------------   58 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------------------   58 (108)
                      ...|++.|+|||.+.. ..++.++||||+|++++++++|..||............    ..                   
T Consensus       174 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (343)
T cd07878         174 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQ  253 (343)
T ss_pred             CccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhh
Confidence            3568999999999876 46788999999999999999999998754322111100    00                   


Q ss_pred             CCCcCCCC------CCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           59 PLDEMLDP------RLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        59 ~~~~~~~~------~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ........      ......+.+++.+|+..||.+||++++++.+.++..
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~  303 (343)
T cd07878         254 SLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ  303 (343)
T ss_pred             ccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence            00000000      001144789999999999999999999976666654

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.62  E-value=1.4e-15  Score=87.68  Aligned_cols=94  Identities=15%  Similarity=0.103  Sum_probs=68.4

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch-hHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF-FLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..++..|++||.......+.++|+|++|++++++++|..|+.... .................+...+..+.+++..|+.
T Consensus       163 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~  242 (260)
T cd06606         163 VRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLR  242 (260)
T ss_pred             CCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCc
Confidence            457788999999887778899999999999999999999987654 2222222221111111122224779999999999


Q ss_pred             CCCCCCCCHhhHHHH
Q 041728           83 GNPESRLIITLTDGL   97 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l   97 (108)
                      .+|.+||++.++..+
T Consensus       243 ~~p~~Rp~~~~ll~~  257 (260)
T cd06606         243 RDPKKRPTADELLQH  257 (260)
T ss_pred             CChhhCCCHHHHhhC
Confidence            999999999998544

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.62  E-value=2.6e-15  Score=88.17  Aligned_cols=95  Identities=16%  Similarity=0.204  Sum_probs=63.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcc-h-------------hHH-hhhhcCCCCCcCCCCCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQM-F-------------FLQ-FQLHLPIPLDEMLDPRL   68 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~-~-------------~~~-~~~~~~~~~~~~~~~~~   68 (108)
                      ..++..|+|||...+..++.++|+||+|+++++++++..+.... .             ... ........ .....+..
T Consensus       172 ~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  250 (284)
T cd05079         172 LDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG-KRLPRPPN  250 (284)
T ss_pred             CCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcC-ccCCCCCC
Confidence            34566799999988778888999999999999999865443211 0             000 00000011 11111122


Q ss_pred             CchHHHHHHhhhcCCCCCCCCCHhhH-HHHHH
Q 041728           69 PPDPLFDVAFSCLNGNPESRLIITLT-DGLKR   99 (108)
Q Consensus        69 ~~~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~   99 (108)
                      .+..+.+++.+||+.+|.+||+++++ ..++.
T Consensus       251 ~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~  282 (284)
T cd05079         251 CPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA  282 (284)
T ss_pred             CCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence            23679999999999999999999999 55554

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.62  E-value=1.1e-16  Score=95.74  Aligned_cols=95  Identities=16%  Similarity=0.062  Sum_probs=67.9

Q ss_pred             cccccceecccccc------cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC--CCcCC-CCCCCchHHH
Q 041728            4 ILLEFMNFFEGLAY------TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP--LDEML-DPRLPPDPLF   74 (108)
Q Consensus         4 ~~~~~~~~ape~~~------~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~   74 (108)
                      ..||+.|+|||.+.      ...++.++|+||+|+++|++++|..||...........+...  ..... .+.. +..+.
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~  241 (330)
T cd05601         163 PVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKV-SSDFL  241 (330)
T ss_pred             ccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCC-CHHHH
Confidence            35889999999886      345678899999999999999999999766543333322111  11111 1223 36789


Q ss_pred             HHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           75 DVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        75 ~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      +++..|+. +|.+|++++++..+.++
T Consensus       242 ~li~~ll~-~p~~R~t~~~l~~h~~~  266 (330)
T cd05601         242 DLIQSLLC-GQKERLGYEGLCCHPFF  266 (330)
T ss_pred             HHHHHHcc-ChhhCCCHHHHhCCCCc
Confidence            99999997 99999999998554443

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=1.5e-15  Score=88.04  Aligned_cols=96  Identities=13%  Similarity=0.000  Sum_probs=68.5

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC---CCcCCCCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP---LDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ..++..|++||.+.+..++.++|+|++|++++++++|..||...............   ........+ +..+.+++.+|
T Consensus       153 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~  231 (260)
T cd05611         153 FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFC-SPEAVDLINRL  231 (260)
T ss_pred             CCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccC-CHHHHHHHHHH
Confidence            45788999999988777888999999999999999999999765543332221111   111111222 37799999999


Q ss_pred             cCCCCCCCCCHh---hHHHHHHH
Q 041728           81 LNGNPESRLIIT---LTDGLKRL  100 (108)
Q Consensus        81 ~~~~p~~Rp~~~---~l~~l~~l  100 (108)
                      |..+|+.||++.   +++.+.++
T Consensus       232 l~~~p~~R~~~~~~~~~l~~~~~  254 (260)
T cd05611         232 LCMDPAKRLGANGYQEIKSHPFF  254 (260)
T ss_pred             ccCCHHHccCCCcHHHHHcChHh
Confidence            999999999764   44444444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=7.8e-16  Score=88.72  Aligned_cols=93  Identities=14%  Similarity=0.152  Sum_probs=68.9

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..++..|++||......++.++|+|++|++++++++|..|+........................ +..+.+++..||..
T Consensus       159 ~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~l~~  237 (254)
T cd06627         159 VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGI-SPELKDFLMQCFQK  237 (254)
T ss_pred             cccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCC-CHHHHHHHHHHHhC
Confidence            45778899999887766788999999999999999999998765433332222212122222233 37799999999999


Q ss_pred             CCCCCCCHhhHHHH
Q 041728           84 NPESRLIITLTDGL   97 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l   97 (108)
                      +|++||++.++..+
T Consensus       238 ~p~~R~~~~~~l~~  251 (254)
T cd06627         238 DPNLRPTAKQLLKH  251 (254)
T ss_pred             ChhhCcCHHHHhcC
Confidence            99999999988543

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.62  E-value=9.6e-16  Score=91.64  Aligned_cols=98  Identities=16%  Similarity=0.109  Sum_probs=69.2

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CCCC------------------
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PIPL------------------   60 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~------------------   60 (108)
                      ..++..|++||.+... .++.++|+|++|++++++++|..||.+.........+    ....                  
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (330)
T cd07834         166 YVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKS  245 (330)
T ss_pred             cccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhh
Confidence            4567889999998876 6788999999999999999999998755422111100    0000                  


Q ss_pred             --------CcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           61 --------DEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        61 --------~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                              .....+..+ ..+.+++..||..+|.+||++.+++.+.++..
T Consensus       246 ~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~  294 (330)
T cd07834         246 LPKKPKKPLSKLFPGAS-PEAIDLLEKMLVFDPKKRITADEALAHPYLAQ  294 (330)
T ss_pred             cccCCcchhHHhcccCC-HHHHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence                    000011222 56889999999999999999999977666654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.62  E-value=2.4e-15  Score=90.01  Aligned_cols=98  Identities=20%  Similarity=0.195  Sum_probs=66.3

Q ss_pred             cccceecccccccC--CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh-cCCCCC---------------------
Q 041728            6 LEFMNFFEGLAYTI--KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH-LPIPLD---------------------   61 (108)
Q Consensus         6 ~~~~~~ape~~~~~--~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------------------   61 (108)
                      ++..|++||.+...  .++.++|+|++|++++++++|..||........... ......                     
T Consensus       170 ~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (328)
T cd08226         170 SVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSG  249 (328)
T ss_pred             CccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhh
Confidence            45569999998753  467899999999999999999999875432211110 000000                     


Q ss_pred             ----------------cC-------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHHH
Q 041728           62 ----------------EM-------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLASF  103 (108)
Q Consensus        62 ----------------~~-------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~~  103 (108)
                                      ..       ..+......+.+++.+||+.||++||++++++++.++...
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~  314 (328)
T cd08226         250 VDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV  314 (328)
T ss_pred             hhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence                            00       0000112458899999999999999999999777776554

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.61  E-value=2e-16  Score=94.31  Aligned_cols=88  Identities=17%  Similarity=0.100  Sum_probs=67.4

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|++||.+....++.++|+||+|+++|++++|..||..................  .+...+..+.+++..||+.
T Consensus       158 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~--~p~~~~~~~~~li~~~l~~  235 (318)
T cd05582         158 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLG--MPQFLSPEAQSLLRALFKR  235 (318)
T ss_pred             ccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhc
Confidence            56899999999998878888999999999999999999999866544433322222111  1222336799999999999


Q ss_pred             CCCCCCCHhh
Q 041728           84 NPESRLIITL   93 (108)
Q Consensus        84 ~p~~Rp~~~~   93 (108)
                      ||.+||++.+
T Consensus       236 ~P~~R~~a~~  245 (318)
T cd05582         236 NPANRLGAGP  245 (318)
T ss_pred             CHhHcCCCCC
Confidence            9999999655

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.61  E-value=2.1e-15  Score=88.26  Aligned_cols=87  Identities=16%  Similarity=0.178  Sum_probs=62.1

Q ss_pred             ccccceeccccccc-CCCcccccchhhhHHHHHHH-hCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            5 LLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVI-KGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         5 ~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      .++..|++||.+.. ..++.++|+|++|+++|+++ .|..|+............... .....+  ....+.+++.+||+
T Consensus       181 ~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~li~~cl~  257 (274)
T cd05076         181 VERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEKK-HRLPEP--SCKELATLISQCLT  257 (274)
T ss_pred             ccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHhc-cCCCCC--CChHHHHHHHHHcc
Confidence            46788999998865 45788999999999999985 588888755432221111111 111111  22568999999999


Q ss_pred             CCCCCCCCHhhH
Q 041728           83 GNPESRLIITLT   94 (108)
Q Consensus        83 ~~p~~Rp~~~~l   94 (108)
                      .+|++||++.+|
T Consensus       258 ~~p~~Rps~~~i  269 (274)
T cd05076         258 YEPTQRPSFRTI  269 (274)
T ss_pred             cChhhCcCHHHH
Confidence            999999999998

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.61  E-value=5.9e-16  Score=90.57  Aligned_cols=93  Identities=12%  Similarity=-0.021  Sum_probs=63.9

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----C------------CCCCcCC--
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----P------------IPLDEML--   64 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~------------~~~~~~~--   64 (108)
                      ..++..|++||.+.. ..++.++|+||+|++++++++|..||...+........    .            .......  
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (282)
T cd07831         158 YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFP  237 (282)
T ss_pred             CCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCc
Confidence            346788999997654 45678899999999999999999998755432211100    0            0000000  


Q ss_pred             ----------CCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHH
Q 041728           65 ----------DPRLPPDPLFDVAFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        65 ----------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                                .+.. +..+.+++.+||..+|++||+++++..+
T Consensus       238 ~~~~~~~~~~~~~~-~~~~~~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         238 SKKGTGLRKLLPNA-SAEGLDLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             ccccccHHHHcccc-cHHHHHHHHHHhccCcccccCHHHHhhC
Confidence                      0112 2669999999999999999999998543

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.61  E-value=7.3e-16  Score=93.39  Aligned_cols=97  Identities=9%  Similarity=-0.032  Sum_probs=65.9

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCC-CC-CchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDP-RL-PPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~l~~~c~   81 (108)
                      .+||+.|+|||.+.+..++.++|+||+|+++|++++|..||.+.........+.........+ .. ....+.+++.+++
T Consensus       196 ~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~  275 (363)
T cd05628         196 TVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFC  275 (363)
T ss_pred             ccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHc
Confidence            579999999999988889999999999999999999999998765444333222111111111 11 1356778877643


Q ss_pred             C--CCCCCCCCHhhHHHHHHH
Q 041728           82 N--GNPESRLIITLTDGLKRL  100 (108)
Q Consensus        82 ~--~~p~~Rp~~~~l~~l~~l  100 (108)
                      .  .++..||++++|+.+.++
T Consensus       276 ~~~~~r~~r~~~~ei~~hp~f  296 (363)
T cd05628         276 CEWEHRIGAPGVEEIKTNPFF  296 (363)
T ss_pred             CChhhcCCCCCHHHHhCCCCC
Confidence            3  334456899998655443

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.61  E-value=8.5e-16  Score=89.64  Aligned_cols=95  Identities=19%  Similarity=0.048  Sum_probs=68.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHH----hhhhcCCCCCcCCCCCCCchHHHHHHhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ----FQLHLPIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ..++..|+|||.+....++.++|+||+|++++++++|..||.......    .......  .....+...+..+.+++..
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~  243 (267)
T PHA03390        166 YDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ--KKLPFIKNVSKNANDFVQS  243 (267)
T ss_pred             CCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc--ccCCcccccCHHHHHHHHH
Confidence            457889999999988888889999999999999999999986432111    1111111  1111122233779999999


Q ss_pred             hcCCCCCCCCC-HhhHHHHHHH
Q 041728           80 CLNGNPESRLI-ITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~-~~~l~~l~~l  100 (108)
                      ||+.+|.+|++ ++++++++++
T Consensus       244 ~l~~~p~~R~~~~~~~l~h~~~  265 (267)
T PHA03390        244 MLKYNINYRLTNYNEIIKHPFL  265 (267)
T ss_pred             HhccChhhCCchHHHHhcCCcc
Confidence            99999999996 6888665544

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.61  E-value=4.9e-16  Score=92.87  Aligned_cols=88  Identities=11%  Similarity=0.037  Sum_probs=67.0

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...|++.|+|||.+....++.++|+||+|+++|++++|..||................. ...+... ..+.+++..|+.
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~ll~~ll~  232 (325)
T cd05604         155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL-VLRPGAS-LTAWSILEELLE  232 (325)
T ss_pred             cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc-cCCCCCC-HHHHHHHHHHhc
Confidence            35689999999999888889999999999999999999999986654433332222111 1122233 678899999999


Q ss_pred             CCCCCCCCHh
Q 041728           83 GNPESRLIIT   92 (108)
Q Consensus        83 ~~p~~Rp~~~   92 (108)
                      .+|.+||++.
T Consensus       233 ~~p~~R~~~~  242 (325)
T cd05604         233 KDRQRRLGAK  242 (325)
T ss_pred             cCHHhcCCCC
Confidence            9999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.61  E-value=6.4e-16  Score=90.60  Aligned_cols=92  Identities=13%  Similarity=0.057  Sum_probs=63.1

Q ss_pred             ccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh----c---------------------CC
Q 041728            5 LLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH----L---------------------PI   58 (108)
Q Consensus         5 ~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~----~---------------------~~   58 (108)
                      .+++.|+|||.+.. ..++.++|+|++|++++++++|+.||.+.........    .                     ..
T Consensus       162 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (285)
T cd07861         162 VVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPK  241 (285)
T ss_pred             cccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccc
Confidence            45788999998765 3467889999999999999999999875432211110    0                     00


Q ss_pred             ---CCCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHH
Q 041728           59 ---PLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        59 ---~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                         .........+ +.++.+++.+||..||.+||+++++..+
T Consensus       242 ~~~~~~~~~~~~~-~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         242 WKKGSLRSAVKNL-DEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             cCcchhHHhcCCC-CHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence               0000001112 3668899999999999999999998543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.61  E-value=2.5e-16  Score=95.71  Aligned_cols=97  Identities=14%  Similarity=0.022  Sum_probs=68.8

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC--CCcCCCCCCCchHHHHHHhhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP--LDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      .++||+.|+|||.+....++.++|+||+|+++|++++|..||...............  .............+.+++..|
T Consensus       203 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l  282 (376)
T cd05598         203 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRL  282 (376)
T ss_pred             ccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHH
Confidence            357999999999998888899999999999999999999999876544333221111  111111111236678888886


Q ss_pred             cCCCCCCCC---CHhhHHHHHHH
Q 041728           81 LNGNPESRL---IITLTDGLKRL  100 (108)
Q Consensus        81 ~~~~p~~Rp---~~~~l~~l~~l  100 (108)
                      + .+|.+|+   ++.++..+.++
T Consensus       283 ~-~~p~~R~~~~t~~ell~h~~~  304 (376)
T cd05598         283 C-CGAEDRLGKNGADEIKAHPFF  304 (376)
T ss_pred             h-cCHhhcCCCCCHHHHhCCCCc
Confidence            6 5999999   88888555443

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.61  E-value=1.2e-15  Score=91.26  Aligned_cols=87  Identities=14%  Similarity=0.079  Sum_probs=66.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|..||.+................  .+......+.+++.+|+..
T Consensus       161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~--~p~~~~~~~~~li~~~l~~  238 (323)
T cd05615         161 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS--YPKSLSKEAVSICKGLMTK  238 (323)
T ss_pred             ccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCccCCHHHHHHHHHHccc
Confidence            45899999999998888889999999999999999999999876543333322221111  1222336789999999999


Q ss_pred             CCCCCCCHh
Q 041728           84 NPESRLIIT   92 (108)
Q Consensus        84 ~p~~Rp~~~   92 (108)
                      +|.+|++..
T Consensus       239 ~p~~R~~~~  247 (323)
T cd05615         239 HPSKRLGCG  247 (323)
T ss_pred             CHhhCCCCC
Confidence            999999853

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.61  E-value=1.3e-15  Score=97.53  Aligned_cols=92  Identities=21%  Similarity=0.174  Sum_probs=68.9

Q ss_pred             cccceecccccc---cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCC-CCCCchHHHHHHhhhc
Q 041728            6 LEFMNFFEGLAY---TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLD-PRLPPDPLFDVAFSCL   81 (108)
Q Consensus         6 ~~~~~~ape~~~---~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~c~   81 (108)
                      =|+.|.+||++.   +...+.++|||++||++|-+|....||.......+    ......... +... ..+.+|+..||
T Consensus       217 TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laI----lng~Y~~P~~p~ys-~~l~~LI~~mL  291 (738)
T KOG1989|consen  217 TTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAI----LNGNYSFPPFPNYS-DRLKDLIRTML  291 (738)
T ss_pred             CCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeE----EeccccCCCCccHH-HHHHHHHHHHh
Confidence            368899999885   35678999999999999999999999986643222    222222222 2222 67999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      +.||.+||++-+| ..+..+..
T Consensus       292 ~~nP~~RPnI~Qv~~~~~~l~~  313 (738)
T KOG1989|consen  292 QPNPDERPNIYQVLEEIFELAN  313 (738)
T ss_pred             ccCcccCCCHHHHHHHHHHHhc
Confidence            9999999999999 66655543

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.61  E-value=8.2e-16  Score=90.21  Aligned_cols=94  Identities=16%  Similarity=0.104  Sum_probs=65.3

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh----------------cCC------CC
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH----------------LPI------PL   60 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~------~~   60 (108)
                      ..++..|++||.+... .++.++|+|++|+++|++++|..|+...........                ...      ..
T Consensus       161 ~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd07833         161 YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAF  240 (288)
T ss_pred             cccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccccc
Confidence            4567889999998877 778899999999999999999988865432211100                000      00


Q ss_pred             CcCC--------CCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHH
Q 041728           61 DEML--------DPRLPPDPLFDVAFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        61 ~~~~--------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                      ....        .+...+.++.+++.+||..+|++||+++++..+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  285 (288)
T cd07833         241 PEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH  285 (288)
T ss_pred             CCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence            0000        111223668999999999999999999988543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.60  E-value=8.1e-16  Score=93.93  Aligned_cols=97  Identities=16%  Similarity=0.087  Sum_probs=73.8

Q ss_pred             cccccceecccccccC---CC-cccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhh
Q 041728            4 ILLEFMNFFEGLAYTI---KI-TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~---~~-~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      -+|||.|||||.+..+   .+ +.+.|||++|+.+|.++.|+.||.+.........+.+..............+.+++.+
T Consensus       275 tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~  354 (576)
T KOG0585|consen  275 TVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKR  354 (576)
T ss_pred             cCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHH
Confidence            5799999999999862   23 3678999999999999999999998876666555444433322211123669999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ++.+||+.|.+..+|..+.++
T Consensus       355 lL~KdP~~Ri~l~~ik~Hpwv  375 (576)
T KOG0585|consen  355 LLEKDPEQRITLPDIKLHPWV  375 (576)
T ss_pred             HhhcChhheeehhhheeccee
Confidence            999999999999998555543

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.60  E-value=1.4e-15  Score=90.80  Aligned_cols=87  Identities=13%  Similarity=0.010  Sum_probs=65.9

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|+|||.+....++.++|+||+|+++|++++|..||...+..............  .+......+.+++..|++.
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~li~~~l~~  233 (321)
T cd05603         156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQ--LPGGKTVAACDLLVGLLHK  233 (321)
T ss_pred             ccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCC--CCCCCCHHHHHHHHHHccC
Confidence            56899999999998888889999999999999999999999866543333322221111  1222236789999999999


Q ss_pred             CCCCCCCHh
Q 041728           84 NPESRLIIT   92 (108)
Q Consensus        84 ~p~~Rp~~~   92 (108)
                      +|.+|++..
T Consensus       234 ~p~~R~~~~  242 (321)
T cd05603         234 DQRRRLGAK  242 (321)
T ss_pred             CHhhcCCCC
Confidence            999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.60  E-value=3.2e-15  Score=88.81  Aligned_cols=99  Identities=20%  Similarity=0.206  Sum_probs=66.3

Q ss_pred             cccccceeccccccc--CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh-hcCCCCC-------------c-----
Q 041728            4 ILLEFMNFFEGLAYT--IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL-HLPIPLD-------------E-----   62 (108)
Q Consensus         4 ~~~~~~~~ape~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~-----   62 (108)
                      ..++..|++||.+..  ..++.++|+||+|+++|++++|..||.......... .......             .     
T Consensus       168 ~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (314)
T cd08216         168 SVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSR  247 (314)
T ss_pred             ccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCccc
Confidence            346678999998865  347788999999999999999999997543222111 0000000             0     


Q ss_pred             --CCCC-----------CCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           63 --MLDP-----------RLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        63 --~~~~-----------~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                        ...+           ......+.+++..||..+|++||++++++.+.++..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~  300 (314)
T cd08216         248 SSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQ  300 (314)
T ss_pred             ccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhh
Confidence              0000           000134778999999999999999999976666654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=5.9e-16  Score=94.18  Aligned_cols=96  Identities=11%  Similarity=-0.066  Sum_probs=67.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCC--CCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPI--PLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      .+||+.|+|||.+....++.++|+||+|+++|++++|..||...........+..  .............++.+++.+|+
T Consensus       208 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL  287 (377)
T cd05629         208 TVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLI  287 (377)
T ss_pred             cCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHh
Confidence            5699999999999888899999999999999999999999976544332221111  11111111122367899999999


Q ss_pred             CCCCCCC---CCHhhHHHHHHH
Q 041728           82 NGNPESR---LIITLTDGLKRL  100 (108)
Q Consensus        82 ~~~p~~R---p~~~~l~~l~~l  100 (108)
                      . +|.+|   +++.+++.+.++
T Consensus       288 ~-~~~~r~~r~~~~~~l~hp~~  308 (377)
T cd05629         288 T-NAENRLGRGGAHEIKSHPFF  308 (377)
T ss_pred             c-CHhhcCCCCCHHHHhcCCCc
Confidence            7 66665   588887555443

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.60  E-value=1.4e-15  Score=89.03  Aligned_cols=94  Identities=22%  Similarity=0.245  Sum_probs=65.6

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHH--------------hhh-hcCCCCCcCCCCCCCc
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ--------------FQL-HLPIPLDEMLDPRLPP   70 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~--------------~~~-~~~~~~~~~~~~~~~~   70 (108)
                      ++..|++||......++.++|+|++|++++++++|..|+.......              ... ..... .....+...+
T Consensus       174 ~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  252 (284)
T cd05038         174 SPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG-ERLPRPPSCP  252 (284)
T ss_pred             CcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcC-CcCCCCccCC
Confidence            3456999998887888889999999999999999888765321110              000 11111 1111122233


Q ss_pred             hHHHHHHhhhcCCCCCCCCCHhhH-HHHHHH
Q 041728           71 DPLFDVAFSCLNGNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        71 ~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l  100 (108)
                      .++.+++..||..+|.+||++.+| ..++.+
T Consensus       253 ~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         253 DEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            679999999999999999999999 666554

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.60  E-value=1.6e-15  Score=90.23  Aligned_cols=42  Identities=14%  Similarity=0.255  Sum_probs=37.0

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCC
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRD   45 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~   45 (108)
                      ..||+.|+|||.+.+ ..++.++|+||+|++++++++|..||.
T Consensus       175 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~  217 (317)
T cd07868         175 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  217 (317)
T ss_pred             ccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCcc
Confidence            567889999999876 457889999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.60  E-value=1.5e-15  Score=90.22  Aligned_cols=98  Identities=11%  Similarity=0.082  Sum_probs=68.4

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---hc-CC------------------CC
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---HL-PI------------------PL   60 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---~~-~~------------------~~   60 (108)
                      ..+++.|+|||.+.. ..++.++|+||+|++++++++|..||.+........   .. ..                  ..
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (309)
T cd07872         164 EVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNF  243 (309)
T ss_pred             ccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhc
Confidence            356888999998765 457889999999999999999999987543221111   00 00                  00


Q ss_pred             CcC-------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           61 DEM-------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        61 ~~~-------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ...       ..+.++ .++.+++.+|+..||.+|+++.+++.+.++..
T Consensus       244 ~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~  291 (309)
T cd07872         244 PKYKPQPLINHAPRLD-TEGIELLTKFLQYESKKRISAEEAMKHAYFRS  291 (309)
T ss_pred             CccCCCchhhhccCCC-HHHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence            000       011222 56889999999999999999999977666654

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=5.2e-15  Score=86.06  Aligned_cols=91  Identities=13%  Similarity=0.035  Sum_probs=67.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..++..|++||.+....++.++|+|++|++++++++|..||.....................+......+.+++..||. 
T Consensus       169 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-  247 (264)
T cd06653         169 VTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-  247 (264)
T ss_pred             cCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-
Confidence            4578889999999877788899999999999999999999986654443332222111121222233679999999998 


Q ss_pred             CCCCCCCHhhHH
Q 041728           84 NPESRLIITLTD   95 (108)
Q Consensus        84 ~p~~Rp~~~~l~   95 (108)
                      ++..||+..++.
T Consensus       248 ~~~~r~~~~~~~  259 (264)
T cd06653         248 EEKRRPTAEFLL  259 (264)
T ss_pred             CcccCccHHHHh
Confidence            579999998774

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.60  E-value=2.9e-15  Score=87.12  Aligned_cols=95  Identities=19%  Similarity=0.188  Sum_probs=66.9

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchh---HHhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF---LQFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ..|+..|++||.+....++.++|+|++|++++++++|..|+.....   ................+......+.+++..|
T Consensus       168 ~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  247 (268)
T cd06630         168 LLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRC  247 (268)
T ss_pred             cccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHH
Confidence            3567889999998877788899999999999999999999864321   1111111111111111222236688999999


Q ss_pred             cCCCCCCCCCHhhHHHHH
Q 041728           81 LNGNPESRLIITLTDGLK   98 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~   98 (108)
                      |..+|.+||++.+++.++
T Consensus       248 l~~~p~~R~~~~~ll~~~  265 (268)
T cd06630         248 LELQPEDRPPSRELLKHP  265 (268)
T ss_pred             cCCCcccCcCHHHHhcCc
Confidence            999999999999985443

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.60  E-value=1.4e-15  Score=95.13  Aligned_cols=92  Identities=18%  Similarity=0.153  Sum_probs=70.4

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH-HhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL-QFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      +-|..|.|||+.....|+..+|+||+|+++|+|++|..|+...... .....+..+...    ...+.+..+++..|++.
T Consensus       474 ~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s----~~vS~~AKdLl~~LL~~  549 (612)
T KOG0603|consen  474 ALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS----ECVSDEAKDLLQQLLQV  549 (612)
T ss_pred             chhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc----cccCHHHHHHHHHhccC
Confidence            4467899999999889999999999999999999999999765433 221122211111    23347899999999999


Q ss_pred             CCCCCCCHhhHHHHHHH
Q 041728           84 NPESRLIITLTDGLKRL  100 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l~~l  100 (108)
                      +|.+|++++++..++++
T Consensus       550 dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  550 DPALRLGADEIGAHPWF  566 (612)
T ss_pred             ChhhCcChhhhccCcch
Confidence            99999999999555555

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.60  E-value=6.8e-16  Score=90.48  Aligned_cols=93  Identities=15%  Similarity=0.116  Sum_probs=63.9

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CC------------C------C
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PI------------P------L   60 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~------------~------~   60 (108)
                      ..++..|++||.+.. ..++.++|+||+|++++++++|..||.+..........    ..            .      .
T Consensus       160 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T cd07847         160 YVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSI  239 (286)
T ss_pred             cccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccC
Confidence            346788999998765 45678999999999999999999998755432211100    00            0      0


Q ss_pred             CcC--C------CCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHH
Q 041728           61 DEM--L------DPRLPPDPLFDVAFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        61 ~~~--~------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                      ...  .      .+.. +..+.+++.+||..+|++||++.+++.+
T Consensus       240 ~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         240 PEPETREPLESKFPNI-SSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             CCcccccCHHHHhccC-CHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence            000  0      0112 2568899999999999999999998543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.60  E-value=8.2e-15  Score=85.48  Aligned_cols=91  Identities=16%  Similarity=0.231  Sum_probs=61.2

Q ss_pred             cccccceeccccccc-------CCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhh-cCCCCCcCCCCCC---Cch
Q 041728            4 ILLEFMNFFEGLAYT-------IKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLH-LPIPLDEMLDPRL---PPD   71 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-------~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~   71 (108)
                      ..++..|++||.+..       ..++.++|+||+|+++|++++ +..|+........... ..........+..   ...
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (268)
T cd05086         161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSE  240 (268)
T ss_pred             CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcH
Confidence            456788999998742       234678999999999999986 5778765544333221 1111122222221   236


Q ss_pred             HHHHHHhhhcCCCCCCCCCHhhHH
Q 041728           72 PLFDVAFSCLNGNPESRLIITLTD   95 (108)
Q Consensus        72 ~~~~l~~~c~~~~p~~Rp~~~~l~   95 (108)
                      .+.+++..|| .+|++||++++|.
T Consensus       241 ~~~~l~~~c~-~~P~~Rp~~~~i~  263 (268)
T cd05086         241 RWYEVLQFCW-LSPEKRATAEEVH  263 (268)
T ss_pred             HHHHHHHHHh-hCcccCCCHHHHH
Confidence            6888999999 6799999999983

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.60  E-value=6e-16  Score=91.99  Aligned_cols=42  Identities=14%  Similarity=0.255  Sum_probs=36.7

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCC
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRD   45 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~   45 (108)
                      ..||+.|+|||.+.. ..++.++|+||+|+++|++++|..||.
T Consensus       175 ~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~  217 (317)
T cd07867         175 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  217 (317)
T ss_pred             ceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence            457889999998876 457889999999999999999999885

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.60  E-value=2.2e-15  Score=87.29  Aligned_cols=91  Identities=16%  Similarity=0.060  Sum_probs=66.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..++..|++||.......+.++|+|++|++++++++|..||.........................+..+.+++..||+.
T Consensus       161 ~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  240 (265)
T cd05579         161 IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVP  240 (265)
T ss_pred             cccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcC
Confidence            35677899999988777888999999999999999999998766544333322221111111111247799999999999


Q ss_pred             CCCCCCCHhhH
Q 041728           84 NPESRLIITLT   94 (108)
Q Consensus        84 ~p~~Rp~~~~l   94 (108)
                      +|..||++..+
T Consensus       241 ~p~~Rpt~~~~  251 (265)
T cd05579         241 DPEKRLGAKSI  251 (265)
T ss_pred             CHhhcCCCccH
Confidence            99999999443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.60  E-value=1.1e-15  Score=88.59  Aligned_cols=91  Identities=15%  Similarity=0.047  Sum_probs=66.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchh--HHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF--LQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..|+..|++||.+....++.++|+|++|++++++++|..|+.....  ................+..+ ..+.+++.+||
T Consensus       159 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~l  237 (258)
T cd05578         159 TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWS-TEAIDAINKLL  237 (258)
T ss_pred             cCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCc-HHHHHHHHHHc
Confidence            4577889999998877788999999999999999999999886542  11111111111222223333 77999999999


Q ss_pred             CCCCCCCCCH--hhHH
Q 041728           82 NGNPESRLII--TLTD   95 (108)
Q Consensus        82 ~~~p~~Rp~~--~~l~   95 (108)
                      ..+|.+||++  +++.
T Consensus       238 ~~~p~~R~~~~~~~l~  253 (258)
T cd05578         238 ERDPQKRLGDNLKDLK  253 (258)
T ss_pred             cCChhHcCCccHHHHh
Confidence            9999999999  7664

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.59  E-value=1.2e-15  Score=92.24  Aligned_cols=98  Identities=13%  Similarity=0.017  Sum_probs=64.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCC-Ccchh-------------HHhhhhcCCCCCcC------
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPR-DQMFF-------------LQFQLHLPIPLDEM------   63 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~~~~------   63 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|+++++..++ .....             ..............      
T Consensus       216 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  295 (357)
T PHA03209        216 LAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGS  295 (357)
T ss_pred             ccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCcc
Confidence            46889999999998888999999999999999999854433 22100             00000000000000      


Q ss_pred             ----------------------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           64 ----------------------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        64 ----------------------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                                            ......+....+++.+||+.||.+||++.+++.+.++.
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~  355 (357)
T PHA03209        296 RLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFA  355 (357)
T ss_pred             HHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhc
Confidence                                  00001113466799999999999999999997776654

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.59  E-value=1.3e-15  Score=91.70  Aligned_cols=98  Identities=16%  Similarity=0.164  Sum_probs=67.6

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcC-----------------------CC
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP-----------------------IP   59 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~   59 (108)
                      ..++..|++||.+.. ..++.++|+||+|++++++++|+.||.+...........                       ..
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (342)
T cd07879         174 YVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKS  253 (342)
T ss_pred             ceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhh
Confidence            356788999998865 457789999999999999999999997654222111000                       00


Q ss_pred             CCcC-------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           60 LDEM-------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        60 ~~~~-------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ....       ..+... ..+.+++.+||+.+|.+||++++++.++++..
T Consensus       254 ~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~  302 (342)
T cd07879         254 LPKYPRKDFSTLFPKAS-PQAVDLLEKMLELDVDKRLTATEALEHPYFDS  302 (342)
T ss_pred             cCCcccchHHHHhcCCC-HHHHHHHHHHcCCChhhCcCHHHHhcCcchhh
Confidence            0000       011222 55889999999999999999999966655543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.59  E-value=1.5e-15  Score=91.09  Aligned_cols=97  Identities=15%  Similarity=0.099  Sum_probs=66.5

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---h-cCC--------------------
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---H-LPI--------------------   58 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---~-~~~--------------------   58 (108)
                      ..|+..|+|||.+.. ..++.++|+||+|++++++++|+.||.+........   . ...                    
T Consensus       169 ~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (336)
T cd07849         169 YVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKS  248 (336)
T ss_pred             cCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhh
Confidence            457888999998654 457889999999999999999999986543211100   0 000                    


Q ss_pred             C--CCc----CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           59 P--LDE----MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        59 ~--~~~----~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .  ...    ...+.. ...+.+++.+||+.+|++||++.++..+.++.
T Consensus       249 ~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~  296 (336)
T cd07849         249 LPFKPKVPWNKLFPNA-DPKALDLLDKMLTFNPHKRITVEEALAHPYLE  296 (336)
T ss_pred             cCcCCcccHHHHhccc-CcHHHHHHHHHcCCChhhCcCHHHHhcCcccc
Confidence            0  000    001122 25588999999999999999999996666554

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.59  E-value=1.4e-15  Score=91.56  Aligned_cols=96  Identities=18%  Similarity=0.076  Sum_probs=66.0

Q ss_pred             ccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcC--------------------------
Q 041728            5 LLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP--------------------------   57 (108)
Q Consensus         5 ~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------   57 (108)
                      .++..|+|||.+.. ..++.++|+||+|+++|++++|..||...+.........                          
T Consensus       179 ~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (342)
T cd07854         179 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDG  258 (342)
T ss_pred             cccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcc
Confidence            46778999998754 456788999999999999999999997544222111000                          


Q ss_pred             CCCCcC---CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           58 IPLDEM---LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        58 ~~~~~~---~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ......   ..+... .++.+++.+||..+|.+||++++++.+.++.
T Consensus       259 ~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~t~~ell~h~~~~  304 (342)
T cd07854         259 GEPRRPLRDLLPGVN-PEALDFLEQILTFNPMDRLTAEEALMHPYMS  304 (342)
T ss_pred             cccCCCHHHHccCCC-HHHHHHHHHHhCCCchhccCHHHHhCCCccc
Confidence            000000   011222 5688999999999999999999996665553

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.59  E-value=1.5e-15  Score=94.21  Aligned_cols=97  Identities=14%  Similarity=0.064  Sum_probs=77.6

Q ss_pred             cccccccceecccccccCCCc-ccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            2 TDILLEFMNFFEGLAYTIKIT-EKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~-~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      +++||+..|-|||.+.+..|+ +++||||+|+++|-+.-|+.||+..+..+.+-.+..  -....|..-..++.+++..+
T Consensus       176 ~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImD--CKYtvPshvS~eCrdLI~sM  253 (864)
T KOG4717|consen  176 TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMD--CKYTVPSHVSKECRDLIQSM  253 (864)
T ss_pred             hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhc--ccccCchhhhHHHHHHHHHH
Confidence            468999999999999998887 789999999999999999999998876555443222  22233444458899999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      +..||.+|.+.++|+...++
T Consensus       254 LvRdPkkRAslEeI~s~~Wl  273 (864)
T KOG4717|consen  254 LVRDPKKRASLEEIVSTSWL  273 (864)
T ss_pred             HhcCchhhccHHHHhccccc
Confidence            99999999999998544444

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.59  E-value=1.4e-15  Score=95.00  Aligned_cols=97  Identities=14%  Similarity=0.106  Sum_probs=79.0

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcc-hhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQM-FFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      +++|||-|||||+.- -.|+..+||||||+.++||.++.-||... ++.+++.....+..+.....+...+..+|+.+|+
T Consensus       203 svIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl  281 (632)
T KOG0584|consen  203 SVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCL  281 (632)
T ss_pred             eeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHh
Confidence            578999999999986 78999999999999999999999999855 4556665666665554444555578999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .. ...|+++.|++...++.
T Consensus       282 ~~-~~~R~sa~eLL~d~Ff~  300 (632)
T KOG0584|consen  282 AT-KSERLSAKELLKDPFFD  300 (632)
T ss_pred             cC-chhccCHHHHhhChhhc
Confidence            98 89999999996655553

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.58  E-value=7.2e-15  Score=88.21  Aligned_cols=98  Identities=20%  Similarity=0.123  Sum_probs=67.8

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh----h-----------------------
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL----H-----------------------   55 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~----~-----------------------   55 (108)
                      ..|+..|++||.+.. ..++.++|+||+|+++|++++|+.||.+........    .                       
T Consensus       172 ~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (337)
T cd07852         172 YVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDS  251 (337)
T ss_pred             ccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhh
Confidence            457888999998764 456788999999999999999999886433211100    0                       


Q ss_pred             cCC---CCCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           56 LPI---PLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        56 ~~~---~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ...   .......+.. +..+.+++..||+.+|.+||++.++..+..+..
T Consensus       252 ~~~~~~~~~~~~~~~~-~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~  300 (337)
T cd07852         252 LPSRPRKPLDELLPKA-SDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ  300 (337)
T ss_pred             cccccccchhhhccCC-CHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence            000   0000111222 367899999999999999999999976666654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.58  E-value=5.9e-15  Score=97.13  Aligned_cols=96  Identities=16%  Similarity=0.187  Sum_probs=67.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh-cCCCCCcCC-CCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH-LPIPLDEML-DPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~l~~~c~   81 (108)
                      ..||+.|+|||.+.+..++.++|+||+|++++++++|..||........... ......... ...++ ..+.+++.+|+
T Consensus       191 ~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP-~~L~~LI~rcL  269 (932)
T PRK13184        191 IVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIP-PFLSQIAMKAL  269 (932)
T ss_pred             CCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCC-HHHHHHHHHHc
Confidence            4699999999999888889999999999999999999999976432221111 001111111 11233 66899999999


Q ss_pred             CCCCCCCCC-HhhH-HHHHHH
Q 041728           82 NGNPESRLI-ITLT-DGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~-~~~l-~~l~~l  100 (108)
                      ..+|.+|++ ++++ ..++..
T Consensus       270 ~~DP~kR~ss~eeLl~~Le~~  290 (932)
T PRK13184        270 AVDPAERYSSVQELKQDLEPH  290 (932)
T ss_pred             cCChhhCcCHHHHHHHHHHHH
Confidence            999999976 4555 444443

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.58  E-value=1.7e-15  Score=88.75  Aligned_cols=92  Identities=11%  Similarity=0.043  Sum_probs=63.9

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----C--C------C-------CCcCC-
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----P--I------P-------LDEML-   64 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~--~------~-------~~~~~-   64 (108)
                      .++..|++||.+....++.++|+|++|++++++++|..++............    .  .      .       ..... 
T Consensus       167 ~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (287)
T cd07838         167 VVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTP  246 (287)
T ss_pred             cccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccc
Confidence            4677899999998888889999999999999999998888654322211100    0  0      0       00000 


Q ss_pred             ------CCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHH
Q 041728           65 ------DPRLPPDPLFDVAFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        65 ------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                            .+... ..+.+++..||+.+|.+||++.++..+
T Consensus       247 ~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         247 RSFKSFVPEIC-EEGLDLLKKMLTFNPHKRISAFEALQH  284 (287)
T ss_pred             cchhhhhhhhh-HHHHHHHHHHhccCCccCCCHHHHhcC
Confidence                  00111 457889999999999999999998543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.58  E-value=2.6e-15  Score=90.15  Aligned_cols=98  Identities=19%  Similarity=0.118  Sum_probs=67.7

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---------------------------h
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---------------------------H   55 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---------------------------~   55 (108)
                      ..++..|++||.+.. ..++.++|+|++|+++|++++|..||.+........                           .
T Consensus       168 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (337)
T cd07858         168 YVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRS  247 (337)
T ss_pred             cccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHh
Confidence            357788999998764 457889999999999999999999986543211000                           0


Q ss_pred             cCCC---CCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           56 LPIP---LDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        56 ~~~~---~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ....   ......+.++ ..+.+++.+||+.+|.+||++++++.+.++..
T Consensus       248 ~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~  296 (337)
T cd07858         248 LPYTPRQSFARLFPHAN-PLAIDLLEKMLVFDPSKRITVEEALAHPYLAS  296 (337)
T ss_pred             cCcccccCHHHHcccCC-HHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence            0000   0000112233 56889999999999999999999976666543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.58  E-value=7.2e-15  Score=85.04  Aligned_cols=88  Identities=16%  Similarity=0.143  Sum_probs=62.3

Q ss_pred             cccccceecccccccC--CCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAYTI--KITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~--~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ..++..|++||.+...  .++.++|+||+|+++|++++ +..|+............... .....+  ....+.+++.+|
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~li~~~  240 (259)
T cd05037         164 RVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQ-HRLPMP--DCAELANLINQC  240 (259)
T ss_pred             cccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcC-CCCCCC--CchHHHHHHHHH
Confidence            3467789999998765  67889999999999999998 56677554322222111111 111111  126689999999


Q ss_pred             cCCCCCCCCCHhhH
Q 041728           81 LNGNPESRLIITLT   94 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l   94 (108)
                      |..+|.+||++.++
T Consensus       241 l~~~p~~Rpt~~~i  254 (259)
T cd05037         241 WTYDPTKRPSFRAI  254 (259)
T ss_pred             hccChhhCCCHHHH
Confidence            99999999999998

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.58  E-value=3e-15  Score=88.83  Aligned_cols=97  Identities=11%  Similarity=0.024  Sum_probs=66.9

Q ss_pred             cccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCC----C---------------CCcCCC
Q 041728            6 LEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPI----P---------------LDEMLD   65 (108)
Q Consensus         6 ~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---------------~~~~~~   65 (108)
                      ++..|+|||.+.+ ..++.++|+|++|+++|++++|..||.+............    .               ......
T Consensus       170 ~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (309)
T cd07845         170 VTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPK  249 (309)
T ss_pred             ccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccC
Confidence            4667999998865 4567899999999999999999999875543322210000    0               000000


Q ss_pred             -C--------CCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           66 -P--------RLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        66 -~--------~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                       +        ......+.+++.+|++.||.+||++++++.++++..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~  295 (309)
T cd07845         250 QPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKE  295 (309)
T ss_pred             CCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence             0        011355789999999999999999999976676643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.58  E-value=5.6e-15  Score=84.38  Aligned_cols=94  Identities=19%  Similarity=0.175  Sum_probs=68.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCc-chhHHhhhhcCCCCCcCCCCCC-CchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQ-MFFLQFQLHLPIPLDEMLDPRL-PPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~c~   81 (108)
                      ..++..|++||......++.++|+|++|++++++++|..|+.. ...................... .+..+.+++..||
T Consensus       146 ~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  225 (244)
T smart00220      146 FVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLL  225 (244)
T ss_pred             ccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHc
Confidence            4577889999998877788899999999999999999999876 3322222222222222211110 2367999999999


Q ss_pred             CCCCCCCCCHhhHHHH
Q 041728           82 NGNPESRLIITLTDGL   97 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l   97 (108)
                      ..+|.+||++.++..+
T Consensus       226 ~~~p~~Rp~~~~~~~~  241 (244)
T smart00220      226 VKDPEKRLTAEEALQH  241 (244)
T ss_pred             cCCchhccCHHHHhhC
Confidence            9999999999998543

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.58  E-value=3e-15  Score=87.74  Aligned_cols=91  Identities=12%  Similarity=0.096  Sum_probs=62.3

Q ss_pred             ccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh-------------------------cCC
Q 041728            5 LLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH-------------------------LPI   58 (108)
Q Consensus         5 ~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~   58 (108)
                      .++..|++||.+... .++.++|+|++|+++|++++|..||...........                         ...
T Consensus       160 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T cd07835         160 VVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPK  239 (283)
T ss_pred             ccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccc
Confidence            357789999987654 467889999999999999999999865432211100                         000


Q ss_pred             C---CCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHH
Q 041728           59 P---LDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDG   96 (108)
Q Consensus        59 ~---~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~   96 (108)
                      .   ......+..+ ..+.+++.+||+.+|.+||+++++..
T Consensus       240 ~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         240 WARQDLSKVVPNLD-EDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             ccccchhhhcCCCC-HHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            0   0000011222 56889999999999999999999843

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.58  E-value=2.3e-15  Score=88.28  Aligned_cols=93  Identities=22%  Similarity=0.182  Sum_probs=63.0

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh----cCC------------------CC
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH----LPI------------------PL   60 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~------------------~~   60 (108)
                      ..++..|++||.+.. ..++.++|+||+|++++++++|..++...........    ...                  ..
T Consensus       160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T cd07846         160 YVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRL  239 (286)
T ss_pred             ccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcccc
Confidence            357788999998865 3466789999999999999999888864332111000    000                  00


Q ss_pred             Cc--------CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHH
Q 041728           61 DE--------MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        61 ~~--------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                      ..        ...+.++ ..+.+++..||..+|++||++.+++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         240 PEVKEIEPLEKRFPKLS-GLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             ccccCcchHHHhCCCcC-HHHHHHHHHHhcCCcccchhHHHHhcC
Confidence            00        0011222 568999999999999999999998543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.58  E-value=4.4e-16  Score=90.10  Aligned_cols=96  Identities=19%  Similarity=0.162  Sum_probs=67.8

Q ss_pred             ccccccceecccccc-cCCCcccccchhhhHHHHHHHhCCCCCCcc---hhHHhhhhcCCC--CCcCCCCCCCchHHHHH
Q 041728            3 DILLEFMNFFEGLAY-TIKITEKYDVYSFGVLVLEVIKGKHPRDQM---FFLQFQLHLPIP--LDEMLDPRLPPDPLFDV   76 (108)
Q Consensus         3 ~~~~~~~~~ape~~~-~~~~~~~~di~s~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l   76 (108)
                      ...++..|+|||.+. ...+..++|+|++|++++++++|..|+...   ............  .............+.++
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  236 (260)
T PF00069_consen  157 PFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDL  236 (260)
T ss_dssp             SSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHH
Confidence            356888999999988 677889999999999999999999998866   211111111000  00110001112679999


Q ss_pred             HhhhcCCCCCCCCCHhhHHHHH
Q 041728           77 AFSCLNGNPESRLIITLTDGLK   98 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~~~~l~~l~   98 (108)
                      +..||..+|++||++++++.++
T Consensus       237 i~~~l~~~p~~R~~~~~l~~~~  258 (260)
T PF00069_consen  237 IKKMLSKDPEQRPSAEELLKHP  258 (260)
T ss_dssp             HHHHSSSSGGGSTTHHHHHTSG
T ss_pred             HHHHccCChhHCcCHHHHhcCC
Confidence            9999999999999999985443

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.58  E-value=1.8e-15  Score=89.10  Aligned_cols=93  Identities=16%  Similarity=0.123  Sum_probs=64.3

Q ss_pred             ccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CCCC-------------------
Q 041728            5 LLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PIPL-------------------   60 (108)
Q Consensus         5 ~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------------------   60 (108)
                      .+++.|+|||.+.. ..++.++|+|++|+++|++++|..||.+..........    ....                   
T Consensus       172 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (295)
T cd07837         172 IVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQW  251 (295)
T ss_pred             ccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcc
Confidence            45678999998865 44678999999999999999999988755433221100    0000                   


Q ss_pred             ----CcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHH
Q 041728           61 ----DEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLK   98 (108)
Q Consensus        61 ----~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~   98 (108)
                          .....+..+ ..+.+++.+||..+|.+||++++++.++
T Consensus       252 ~~~~~~~~~~~~~-~~~~~~i~~~l~~~P~~R~~~~eil~~~  292 (295)
T cd07837         252 KPQDLSRAVPDLS-PEGLDLLQKMLRYDPAKRISAKAALTHP  292 (295)
T ss_pred             cchhHHHhccccC-HHHHHHHHHHccCChhhcCCHHHHhcCC
Confidence                000001222 6688999999999999999999985544

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.58  E-value=2.2e-15  Score=88.37  Aligned_cols=92  Identities=14%  Similarity=0.156  Sum_probs=62.3

Q ss_pred             ccccceecccccccCC-CcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh----cCCC-----------------CC-
Q 041728            5 LLEFMNFFEGLAYTIK-ITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH----LPIP-----------------LD-   61 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~-~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----------------~~-   61 (108)
                      .++..|++||.+.+.. ++.++|+|++|++++++++|..||...........    ....                 .. 
T Consensus       161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd07860         161 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPK  240 (284)
T ss_pred             cccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhccc
Confidence            3577899999886544 57789999999999999999998865432211110    0000                 00 


Q ss_pred             ------cCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHH
Q 041728           62 ------EMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        62 ------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                            ....+.+. .++.+++.+||..||.+||++++++.+
T Consensus       241 ~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         241 WARQDFSKVVPPLD-EDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             ccccCHHHHcccCC-HHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence                  00011222 567899999999999999999988543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.57  E-value=1.2e-14  Score=85.33  Aligned_cols=92  Identities=16%  Similarity=0.156  Sum_probs=61.6

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH--H--------------hhhhcCCCCCcCCCCCCCc
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL--Q--------------FQLHLPIPLDEMLDPRLPP   70 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~--~--------------~~~~~~~~~~~~~~~~~~~   70 (108)
                      +..|++||......++.++|+|++|+++++++++..+.......  .              ................+ +
T Consensus       174 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  252 (284)
T cd05081         174 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGC-P  252 (284)
T ss_pred             ceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCC-C
Confidence            34599999988888889999999999999999865543211100  0              00000011011111222 3


Q ss_pred             hHHHHHHhhhcCCCCCCCCCHhhH-HHHHH
Q 041728           71 DPLFDVAFSCLNGNPESRLIITLT-DGLKR   99 (108)
Q Consensus        71 ~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~   99 (108)
                      ..+.+++..||..+|++||++.+| ..++.
T Consensus       253 ~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~  282 (284)
T cd05081         253 AEIYAIMKECWNNDPSQRPSFSELALQVEA  282 (284)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence            679999999999999999999999 65554

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.57  E-value=5.5e-15  Score=87.13  Aligned_cols=97  Identities=13%  Similarity=0.118  Sum_probs=66.8

Q ss_pred             ccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh----cCCCC-----------------Cc
Q 041728            5 LLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH----LPIPL-----------------DE   62 (108)
Q Consensus         5 ~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----------------~~   62 (108)
                      .+++.|++||.+.. ..++.++|+|++|+++|++++|..||...........    .....                 ..
T Consensus       164 ~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (294)
T PLN00009        164 VVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPK  243 (294)
T ss_pred             ceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhccc
Confidence            45778999998765 3467889999999999999999999865432221110    00000                 00


Q ss_pred             -------CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           63 -------MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        63 -------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                             ...+... ..+.+++.+|+..+|++||++.+++.+.++..
T Consensus       244 ~~~~~~~~~~~~~~-~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~  289 (294)
T PLN00009        244 WPPKDLATVVPTLE-PAGVDLLSKMLRLDPSKRITARAALEHEYFKD  289 (294)
T ss_pred             CCCCCHHHhCcCCC-hHHHHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence                   0011222 55889999999999999999999976666654

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.57  E-value=5.1e-15  Score=90.06  Aligned_cols=98  Identities=10%  Similarity=-0.038  Sum_probs=66.7

Q ss_pred             ccccccceecccccccC----CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCC--CcCCCCCCCchHHHHH
Q 041728            3 DILLEFMNFFEGLAYTI----KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPL--DEMLDPRLPPDPLFDV   76 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~----~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l   76 (108)
                      ...||+.|+|||.+...    .++.++|+||+|+++|++++|..||...........+....  ............+.++
T Consensus       202 ~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  281 (371)
T cd05622         202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL  281 (371)
T ss_pred             CcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHH
Confidence            35689999999998643    37789999999999999999999998765443333222211  1222222223678999


Q ss_pred             HhhhcCCCCCC--CCCHhhHHHHHHH
Q 041728           77 AFSCLNGNPES--RLIITLTDGLKRL  100 (108)
Q Consensus        77 ~~~c~~~~p~~--Rp~~~~l~~l~~l  100 (108)
                      +..|+..++.+  |++++++..+.++
T Consensus       282 i~~~L~~~~~r~~r~~~~ei~~h~~~  307 (371)
T cd05622         282 ICAFLTDREVRLGRNGVEEIKRHLFF  307 (371)
T ss_pred             HHHHcCChhhhcCCCCHHHHhcCccc
Confidence            99999744433  6788888554443

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.57  E-value=4e-15  Score=90.51  Aligned_cols=99  Identities=9%  Similarity=-0.039  Sum_probs=68.4

Q ss_pred             ccccccceecccccccC----CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCC--CcCCCCCCCchHHHHH
Q 041728            3 DILLEFMNFFEGLAYTI----KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPL--DEMLDPRLPPDPLFDV   76 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~----~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l   76 (108)
                      ...||+.|+|||.+...    .++.++|+||+|+++|++++|..||...........+....  ............+.++
T Consensus       202 ~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~l  281 (370)
T cd05621         202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNL  281 (370)
T ss_pred             cCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHH
Confidence            35699999999998653    36789999999999999999999998765444333222111  1111111223668899


Q ss_pred             HhhhcCCCCCC--CCCHhhHHHHHHHH
Q 041728           77 AFSCLNGNPES--RLIITLTDGLKRLA  101 (108)
Q Consensus        77 ~~~c~~~~p~~--Rp~~~~l~~l~~l~  101 (108)
                      +..|+..++..  |+++.++..+.++.
T Consensus       282 i~~~L~~~~~r~~R~~~~e~l~hp~~~  308 (370)
T cd05621         282 ICAFLTDREVRLGRNGVEEIKQHPFFK  308 (370)
T ss_pred             HHHHccCchhccCCCCHHHHhcCcccC
Confidence            99998755543  88999986666553

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.57  E-value=7.4e-15  Score=86.52  Aligned_cols=93  Identities=12%  Similarity=0.032  Sum_probs=67.7

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|++||.+.....+.++|+|++|++++++++|..||.................. ..... +..+.+++.+||..
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~-~~~l~~li~~~l~~  235 (290)
T cd05580         158 LCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVR-FPSFF-SPDAKDLIRNLLQV  235 (290)
T ss_pred             CCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcc-CCccC-CHHHHHHHHHHccC
Confidence            46788999999988777788899999999999999999998765533322222221111 11222 47799999999999


Q ss_pred             CCCCCC-----CHhhHHHHH
Q 041728           84 NPESRL-----IITLTDGLK   98 (108)
Q Consensus        84 ~p~~Rp-----~~~~l~~l~   98 (108)
                      +|.+|+     +++++..+.
T Consensus       236 ~p~~R~~~~~~~~~~l~~~~  255 (290)
T cd05580         236 DLTKRLGNLKNGVNDIKNHP  255 (290)
T ss_pred             CHHHccCcccCCHHHHHcCc
Confidence            999998     666664443

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.57  E-value=3.8e-15  Score=87.32  Aligned_cols=94  Identities=16%  Similarity=0.117  Sum_probs=63.5

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh----hcCCC-------------CCc---
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL----HLPIP-------------LDE---   62 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-------------~~~---   62 (108)
                      ..++..|++||.+... .++.++|+|++|++++++++|..++.+........    .....             ...   
T Consensus       160 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T cd07832         160 QVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITF  239 (286)
T ss_pred             ccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccC
Confidence            4578889999988653 45789999999999999999977775443211110    00000             000   


Q ss_pred             ---------CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHH
Q 041728           63 ---------MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLK   98 (108)
Q Consensus        63 ---------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~   98 (108)
                               ...+... ..+.+++.+|+..+|.+||++++++.+.
T Consensus       240 ~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~R~~~~~~l~h~  283 (286)
T cd07832         240 PESKPIPLEEIFPDAS-PEALDLLKGLLVYDPSKRLSAAEALRHP  283 (286)
T ss_pred             CCCCcchHHHhCCCcc-HHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence                     0001222 6688999999999999999999985443

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.57  E-value=1.8e-15  Score=88.71  Aligned_cols=93  Identities=16%  Similarity=0.088  Sum_probs=61.1

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhH-Hhhh------------------hcCC-CCCc
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFL-QFQL------------------HLPI-PLDE   62 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~-~~~~------------------~~~~-~~~~   62 (108)
                      ..++..|+|||.+.+. .++.++|+||+|+++|++++|..|+...... ....                  .... ....
T Consensus       159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07839         159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP  238 (284)
T ss_pred             CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence            3467889999987654 4678899999999999999987775322111 0000                  0000 0000


Q ss_pred             C---------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHH
Q 041728           63 M---------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        63 ~---------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                      .         ..+.. ..++.+++.+||..||.+||++++++.+
T Consensus       239 ~~~~~~~~~~~~~~~-~~~~~~li~~~l~~~P~~R~t~~~il~h  281 (284)
T cd07839         239 MYPATTSLVNVVPKL-NSTGRDLLQNLLVCNPVQRISAEEALQH  281 (284)
T ss_pred             CCCCcchhhhhcccC-CHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence            0         01112 2568899999999999999999998543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.56  E-value=3.5e-15  Score=89.52  Aligned_cols=98  Identities=16%  Similarity=0.148  Sum_probs=68.5

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---h-cCC-------------------C
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---H-LPI-------------------P   59 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---~-~~~-------------------~   59 (108)
                      ..|+..|++||.+.. ..++.++|+|++|+++|++++|..||.+........   . ...                   .
T Consensus       171 ~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  250 (334)
T cd07855         171 YVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQN  250 (334)
T ss_pred             ccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhh
Confidence            467888999998765 457789999999999999999999997553221110   0 000                   0


Q ss_pred             CC---cC----CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           60 LD---EM----LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        60 ~~---~~----~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ..   ..    ..+.. +..+.+++..||+.+|.+||+++++..+.++..
T Consensus       251 ~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~  299 (334)
T cd07855         251 LPRKQPVPWSKIFPKA-SPEALDLLSQMLQFDPEERITVEQALQHPFLAQ  299 (334)
T ss_pred             cccCCCCCHHHHcccC-CHHHHHHHHHHccCChhhCcCHHHHHhChhhhh
Confidence            00   00    01122 366999999999999999999999976666654

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.56  E-value=1e-14  Score=85.40  Aligned_cols=96  Identities=15%  Similarity=0.014  Sum_probs=66.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH---HhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL---QFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ..++..|++||.+....++.++|+|++|++++++++|..||......   ......... .....+...+..+.+++.+|
T Consensus       154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~  232 (277)
T cd05577         154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE-MAVEYPDKFSPEAKDLCEAL  232 (277)
T ss_pred             ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc-ccccCCccCCHHHHHHHHHH
Confidence            34677899999988777888999999999999999999998654321   111110000 11111222247799999999


Q ss_pred             cCCCCCCCC-----CHhhHHHHHHH
Q 041728           81 LNGNPESRL-----IITLTDGLKRL  100 (108)
Q Consensus        81 ~~~~p~~Rp-----~~~~l~~l~~l  100 (108)
                      |+.+|.+||     ++.++..+.++
T Consensus       233 l~~~p~~R~~~~~~~~~~ll~h~~~  257 (277)
T cd05577         233 LQKDPEKRLGCRGGSADEVREHPLF  257 (277)
T ss_pred             ccCChhHccCCCcccHHHHHhChhh
Confidence            999999999     55556544444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.56  E-value=1.6e-14  Score=84.18  Aligned_cols=89  Identities=18%  Similarity=0.179  Sum_probs=60.4

Q ss_pred             cccceeccccccc-------CCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhh-hcCCCCCcCCCC---CCCchHH
Q 041728            6 LEFMNFFEGLAYT-------IKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQL-HLPIPLDEMLDP---RLPPDPL   73 (108)
Q Consensus         6 ~~~~~~ape~~~~-------~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~   73 (108)
                      +++.|+|||.+..       ..++.++|+||+|+++|++++ |..||.......... .......+...+   ...+..+
T Consensus       164 ~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (269)
T cd05042         164 VPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRW  243 (269)
T ss_pred             CcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHH
Confidence            4567999998642       345678999999999999998 778887654333222 111211122222   1223667


Q ss_pred             HHHHhhhcCCCCCCCCCHhhHH
Q 041728           74 FDVAFSCLNGNPESRLIITLTD   95 (108)
Q Consensus        74 ~~l~~~c~~~~p~~Rp~~~~l~   95 (108)
                      ..++..|| .+|++||++++|.
T Consensus       244 ~~~~~~~~-~dp~~Rpt~~~v~  264 (269)
T cd05042         244 YEVMQFCW-LDPETRPTAEEVH  264 (269)
T ss_pred             HHHHHHHh-cCcccccCHHHHH
Confidence            88999999 5999999999994

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.56  E-value=3.3e-15  Score=87.65  Aligned_cols=96  Identities=11%  Similarity=0.072  Sum_probs=66.1

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhH--HhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL--QFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ..|+..|++||.+.. ..++.++|+||+|++++++++|..||......  ...............+.. +..+.+++..|
T Consensus       155 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~  233 (279)
T cd05633         155 SVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSF-SPELKSLLEGL  233 (279)
T ss_pred             cCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCcccc-CHHHHHHHHHH
Confidence            358899999998864 45788999999999999999999998643211  111111111111112223 36799999999


Q ss_pred             cCCCCCCCC-----CHhhHHHHHHH
Q 041728           81 LNGNPESRL-----IITLTDGLKRL  100 (108)
Q Consensus        81 ~~~~p~~Rp-----~~~~l~~l~~l  100 (108)
                      |..||.+|+     +++++.++.++
T Consensus       234 l~~~p~~R~~~~~~~~~~~~~h~~~  258 (279)
T cd05633         234 LQRDVSKRLGCLGRGAQEVKEHVFF  258 (279)
T ss_pred             hcCCHHHhcCCCCCCHHHHHhCccc
Confidence            999999999     58877655444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.56  E-value=2.4e-15  Score=91.74  Aligned_cols=98  Identities=9%  Similarity=-0.045  Sum_probs=69.7

Q ss_pred             cccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCC----------------------
Q 041728            2 TDILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPI----------------------   58 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------   58 (108)
                      |..+.|.+|.|||++.. +.|+.+.|+|++||+++|+.+-++-|.+.+-.+.+..+..                      
T Consensus       167 TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf  246 (538)
T KOG0661|consen  167 TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNF  246 (538)
T ss_pred             chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhcc
Confidence            45678999999998875 6788999999999999999987777776553322221100                      


Q ss_pred             C-------CCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           59 P-------LDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        59 ~-------~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      .       ....+-+... .++.+++.+|+..||.+||++.+.+++...
T Consensus       247 ~~P~~~~~~l~~L~p~~s-~~~~~li~~ll~WDP~kRpTA~~al~~pff  294 (538)
T KOG0661|consen  247 RFPQVKPSPLKDLLPNAS-SEAASLIERLLAWDPDKRPTASQALQHPFF  294 (538)
T ss_pred             CCCcCCCCChHHhCcccC-HHHHHHHHHHhcCCCccCccHHHHhcCccc
Confidence            0       0011112222 669999999999999999999998665554

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.56  E-value=2.5e-15  Score=91.56  Aligned_cols=88  Identities=17%  Similarity=0.049  Sum_probs=65.7

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH-H--hhh-hcCCCCCcCCCCCCCchHHHHHHh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL-Q--FQL-HLPIPLDEMLDPRLPPDPLFDVAF   78 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~-~--~~~-~~~~~~~~~~~~~~~~~~~~~l~~   78 (108)
                      ..+||++|||||++....|+.++|+|++||++|+|+.|+.||....-. .  .+. .+.....+.. .. -++++.++.+
T Consensus       345 ~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~-~k-FS~eakslc~  422 (591)
T KOG0986|consen  345 GRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYS-DK-FSEEAKSLCE  422 (591)
T ss_pred             cccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcc-cc-cCHHHHHHHH
Confidence            348999999999999999999999999999999999999999754321 1  111 1222222222 22 2377999999


Q ss_pred             hhcCCCCCCCCCHh
Q 041728           79 SCLNGNPESRLIIT   92 (108)
Q Consensus        79 ~c~~~~p~~Rp~~~   92 (108)
                      .++++||.+|..+.
T Consensus       423 ~LL~Kdp~~RLGcr  436 (591)
T KOG0986|consen  423 GLLTKDPEKRLGCR  436 (591)
T ss_pred             HHHccCHHHhccCC
Confidence            99999999998654

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.56  E-value=5.8e-15  Score=86.57  Aligned_cols=95  Identities=13%  Similarity=0.039  Sum_probs=67.8

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchh---HHhhhhcCCCCCcCCCCCCCchHHHHHHhh
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFF---LQFQLHLPIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ..|+..|++||.+..+ .++.++|+|++|++++++++|..||.....   .......... .... +...+..+.+++.+
T Consensus       155 ~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~-~~~~s~~~~~li~~  232 (278)
T cd05606         155 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM-AVEL-PDSFSPELRSLLEG  232 (278)
T ss_pred             cCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhcc-CCCC-CCcCCHHHHHHHHH
Confidence            4688999999998754 578889999999999999999999875521   1111111111 1111 22224779999999


Q ss_pred             hcCCCCCCCC-----CHhhHHHHHHH
Q 041728           80 CLNGNPESRL-----IITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp-----~~~~l~~l~~l  100 (108)
                      |+..+|.+|+     ++.++.++.++
T Consensus       233 ~l~~~p~~R~~~~~~~~~~ll~~~~~  258 (278)
T cd05606         233 LLQRDVNRRLGCLGRGAQEVKEHPFF  258 (278)
T ss_pred             HhhcCHHhccCCCCCCHHHHHhCccc
Confidence            9999999999     88888655554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.56  E-value=6.2e-15  Score=84.92  Aligned_cols=87  Identities=17%  Similarity=0.094  Sum_probs=65.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..++..|++||.......+.++|+|++|++++++++|..||...............  ....+...+..+.+++..||..
T Consensus       153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~i~~~l~~  230 (250)
T cd05123         153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD--PLRFPEFLSPEARDLISGLLQK  230 (250)
T ss_pred             CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHHHHHHHHhcC
Confidence            45778899999988777788999999999999999999999765533322222221  1222222247799999999999


Q ss_pred             CCCCCCCHh
Q 041728           84 NPESRLIIT   92 (108)
Q Consensus        84 ~p~~Rp~~~   92 (108)
                      +|++||++.
T Consensus       231 ~p~~R~~~~  239 (250)
T cd05123         231 DPTKRLGSG  239 (250)
T ss_pred             CHhhCCCcc
Confidence            999999993

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.56  E-value=2.9e-15  Score=88.73  Aligned_cols=93  Identities=13%  Similarity=0.034  Sum_probs=62.3

Q ss_pred             ccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---hcCCCC--------------------
Q 041728            5 LLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---HLPIPL--------------------   60 (108)
Q Consensus         5 ~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------------------   60 (108)
                      .++..|+|||.+... .++.++|+||+|++++++++|..++.+........   ......                    
T Consensus       184 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (310)
T cd07865         184 VVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELP  263 (310)
T ss_pred             ccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCC
Confidence            466789999987654 36788999999999999999998886543221110   000000                    


Q ss_pred             -------CcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHH
Q 041728           61 -------DEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        61 -------~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                             .....+......+.+++..||..+|.+||++++++.+
T Consensus       264 ~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         264 QGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             CccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence                   0000011122457799999999999999999998543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.56  E-value=2.6e-15  Score=88.91  Aligned_cols=92  Identities=14%  Similarity=0.039  Sum_probs=62.5

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh---cCCC-----------CCc----C-
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH---LPIP-----------LDE----M-   63 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----------~~~----~-   63 (108)
                      ..+++.|+|||.+... .++.++|+|++|++++++++|..||.+.........   ....           ...    . 
T Consensus       186 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (311)
T cd07866         186 LVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHS  265 (311)
T ss_pred             ceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhccccccccc
Confidence            3467789999987653 477889999999999999999999875443221110   0000           000    0 


Q ss_pred             ---CC-------CCCCchHHHHHHhhhcCCCCCCCCCHhhHHH
Q 041728           64 ---LD-------PRLPPDPLFDVAFSCLNGNPESRLIITLTDG   96 (108)
Q Consensus        64 ---~~-------~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~   96 (108)
                         ..       .... ..+.+++..|+..+|.+||++.+++.
T Consensus       266 ~~~~~~~~~~~~~~~~-~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         266 FTNYPRTLEERFGKLG-PEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             CCCCCccHHHHcccCC-hhHHHHHHHHcccCcccCcCHHHHhc
Confidence               00       0111 45889999999999999999998843

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.56  E-value=1.3e-15  Score=92.23  Aligned_cols=95  Identities=12%  Similarity=0.038  Sum_probs=66.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcC-CCCC-CCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEM-LDPR-LPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~l~~~c~   81 (108)
                      .+||+.|+|||.+....++.++|+||+|+++|++++|..||................... ..+. .....+.+++.+++
T Consensus       196 ~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~  275 (360)
T cd05627         196 TVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC  275 (360)
T ss_pred             cCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc
Confidence            569999999999988889999999999999999999999998765544333222111111 1111 12366888888765


Q ss_pred             CCCCCCCCC---HhhHHHHHH
Q 041728           82 NGNPESRLI---ITLTDGLKR   99 (108)
Q Consensus        82 ~~~p~~Rp~---~~~l~~l~~   99 (108)
                       .+|.+|++   +.++..+.+
T Consensus       276 -~~p~~R~~~~~~~ei~~hp~  295 (360)
T cd05627         276 -TDSENRIGSNGVEEIKSHPF  295 (360)
T ss_pred             -cChhhcCCCCCHHHHhcCCC
Confidence             48999985   566644443

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.55  E-value=3.8e-15  Score=88.13  Aligned_cols=95  Identities=11%  Similarity=0.059  Sum_probs=65.3

Q ss_pred             ccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---h-cCC-------------CCCcCC--
Q 041728            5 LLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---H-LPI-------------PLDEML--   64 (108)
Q Consensus         5 ~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---~-~~~-------------~~~~~~--   64 (108)
                      .+++.|++||.+.. ..++.++|+||+|+++|++++|..||..........   . ...             ......  
T Consensus       165 ~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (301)
T cd07873         165 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYP  244 (301)
T ss_pred             ceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccC
Confidence            46788999998765 346788999999999999999999987544221110   0 000             000000  


Q ss_pred             ----------CCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           65 ----------DPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        65 ----------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                                .+.++ ..+.+++.+|+..||.+||++++++.+.++
T Consensus       245 ~~~~~~~~~~~~~~~-~~~~~li~~ml~~dp~~R~t~~eil~h~~f  289 (301)
T cd07873         245 KYRADCLHNHAPRLD-SDGAELLSKLLQFEGRKRISAEEAMKHPYF  289 (301)
T ss_pred             ccccccHHhhcCCCC-HHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence                      01122 568899999999999999999999655554

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.55  E-value=1.5e-14  Score=86.78  Aligned_cols=98  Identities=17%  Similarity=0.099  Sum_probs=67.9

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---------------------------h
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---------------------------H   55 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---------------------------~   55 (108)
                      ..|+..|++||.... ..++.++|+||+|++++++++|..||...+......                           .
T Consensus       169 ~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (332)
T cd07857         169 YVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRS  248 (332)
T ss_pred             cccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHh
Confidence            467889999998765 457889999999999999999998886533111000                           0


Q ss_pred             cCC---CCCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           56 LPI---PLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        56 ~~~---~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ...   .......+.. ...+.+++.+|++.+|.+||++++++..+++..
T Consensus       249 ~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~  297 (332)
T cd07857         249 LPNIPKKPFESIFPNA-NPLALDLLEKLLAFDPTKRISVEEALEHPYLAI  297 (332)
T ss_pred             ccccCCcchHhhCCCC-CHHHHHHHHHHccCCcccCCCHHHHhcChhhhh
Confidence            000   0000111222 356899999999999999999999976676643

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.55  E-value=1.1e-14  Score=90.77  Aligned_cols=97  Identities=11%  Similarity=-0.046  Sum_probs=64.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch-----------hHHhhhhcC---CCCCcC------
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF-----------FLQFQLHLP---IPLDEM------   63 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~-----------~~~~~~~~~---~~~~~~------   63 (108)
                      ..||+.|++||++.+..++.++||||+|+++|+++.+..++....           ....+....   ......      
T Consensus       322 ~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~  401 (461)
T PHA03211        322 IAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLV  401 (461)
T ss_pred             cCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHH
Confidence            468999999999988889999999999999999988665443211           001111000   000000      


Q ss_pred             ---------------CCCC-----CCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           64 ---------------LDPR-----LPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        64 ---------------~~~~-----~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                                     ..+.     .....+.+++..||+.||.+||++.|++.+.++
T Consensus       402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f  458 (461)
T PHA03211        402 SQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLF  458 (461)
T ss_pred             HHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCccc
Confidence                           0000     011358899999999999999999999766654

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.55  E-value=5.9e-15  Score=86.19  Aligned_cols=91  Identities=14%  Similarity=0.129  Sum_probs=67.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      +.++..|++||......++.++|+|++|++++++++|..|+............... ........ +..+.+++..||..
T Consensus       182 ~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~li~~~l~~  259 (280)
T cd05581         182 FVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL-EYSFPPNF-PPDAKDLIEKLLVL  259 (280)
T ss_pred             ccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc-CCCCCCcc-CHHHHHHHHHHhcC
Confidence            45678899999988777888999999999999999999998765433222211111 11111222 36799999999999


Q ss_pred             CCCCCCCH----hhHHH
Q 041728           84 NPESRLII----TLTDG   96 (108)
Q Consensus        84 ~p~~Rp~~----~~l~~   96 (108)
                      +|.+||++    .+++.
T Consensus       260 ~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         260 DPQDRLGVNEGYDELKA  276 (280)
T ss_pred             CHhhCCCcccCHHHHhc
Confidence            99999999    77643

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.55  E-value=7.1e-15  Score=88.17  Aligned_cols=96  Identities=11%  Similarity=-0.029  Sum_probs=65.5

Q ss_pred             cccccceecccccc-----cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCC---CCCchHHHH
Q 041728            4 ILLEFMNFFEGLAY-----TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDP---RLPPDPLFD   75 (108)
Q Consensus         4 ~~~~~~~~ape~~~-----~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~   75 (108)
                      ..||+.|+|||.+.     ...++.++|+||+|+++|++++|..||...........+.........+   ...+..+.+
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~  242 (332)
T cd05623         163 AVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKD  242 (332)
T ss_pred             cccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHH
Confidence            46899999999875     2457789999999999999999999998766544443322211111111   112367899


Q ss_pred             HHhhhcCCCCCC--CCCHhhHHHHHH
Q 041728           76 VAFSCLNGNPES--RLIITLTDGLKR   99 (108)
Q Consensus        76 l~~~c~~~~p~~--Rp~~~~l~~l~~   99 (108)
                      ++.+|+..++..  |+++.++..+.+
T Consensus       243 li~~ll~~~~~r~~r~~~~~~~~h~~  268 (332)
T cd05623         243 LIRRLICSREHRLGQNGIEDFKQHPF  268 (332)
T ss_pred             HHHHHccChhhhcCCCCHHHHhCCCC
Confidence            999988654433  678888855543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.54  E-value=1.9e-14  Score=87.30  Aligned_cols=91  Identities=18%  Similarity=0.148  Sum_probs=74.9

Q ss_pred             cccccccceecccccccCCCc-ccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            2 TDILLEFMNFFEGLAYTIKIT-EKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~-~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      .+|||++.|.+||.+++..|. .-+|.|++|+++|.+..|..||++.+......++.++  ....|..+ .....++.-+
T Consensus       210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~G--aYrEP~~P-SdA~gLIRwm  286 (668)
T KOG0611|consen  210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRG--AYREPETP-SDASGLIRWM  286 (668)
T ss_pred             HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcc--cccCCCCC-chHHHHHHHH
Confidence            469999999999999998887 6799999999999999999999998776666555554  23334444 4567888889


Q ss_pred             cCCCCCCCCCHhhHH
Q 041728           81 LNGNPESRLIITLTD   95 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~   95 (108)
                      +..||+.|.++.+|.
T Consensus       287 LmVNP~RRATieDiA  301 (668)
T KOG0611|consen  287 LMVNPERRATIEDIA  301 (668)
T ss_pred             HhcCcccchhHHHHh
Confidence            999999999999984

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.54  E-value=9.7e-15  Score=85.46  Aligned_cols=93  Identities=14%  Similarity=0.115  Sum_probs=64.1

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh----cCCC----CCc------------
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH----LPIP----LDE------------   62 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~------------   62 (108)
                      ..++..|++||.+... .++.++|+|++|++++++++|+.+|...+.......    ....    ...            
T Consensus       158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T cd05118         158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF  237 (283)
T ss_pred             ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence            3466789999988765 677899999999999999999988865442221110    0000    000            


Q ss_pred             ---------CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHH
Q 041728           63 ---------MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        63 ---------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                               ...+.. +..+.+++..||..+|.+||++.+++..
T Consensus       238 ~~~~~~~~~~~~~~~-~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         238 PKKAGMPLPKLFPNA-SPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             ccccccCHHHhhhhh-CHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence                     000111 2568899999999999999999998543

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.54  E-value=3.1e-15  Score=86.07  Aligned_cols=99  Identities=13%  Similarity=0.000  Sum_probs=73.7

Q ss_pred             ccccccceeccccccc--CCCcccccchhhhHHHHHHHhCCCCCCcchhH-HhhhhcCCCCCcCCC-CCC---CchHHHH
Q 041728            3 DILLEFMNFFEGLAYT--IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL-QFQLHLPIPLDEMLD-PRL---PPDPLFD   75 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~---~~~~~~~   75 (108)
                      .-+|+..|||||.+..  ..|+.++|+||+|+.++|+.+|..|+...+.. +-+.....+.++.+. +.-   ....+..
T Consensus       226 ~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~  305 (361)
T KOG1006|consen  226 VDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVR  305 (361)
T ss_pred             hccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHH
Confidence            4578999999998864  34889999999999999999999999877543 223333333333332 211   2356899


Q ss_pred             HHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ++..|+.+|-..||+++++.+....+
T Consensus       306 fintCl~Kd~~~Rpky~~Lk~~~fyr  331 (361)
T KOG1006|consen  306 FINTCLIKDRSDRPKYDDLKKFPFYR  331 (361)
T ss_pred             HHHHHhhcccccCcchhhhhcCchhh
Confidence            99999999999999999986666554

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.54  E-value=6.5e-15  Score=86.30  Aligned_cols=93  Identities=14%  Similarity=0.066  Sum_probs=63.0

Q ss_pred             ccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc---C-----CCCCc-------------
Q 041728            5 LLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL---P-----IPLDE-------------   62 (108)
Q Consensus         5 ~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~-------------   62 (108)
                      .++..|++||.+.+ ..++.++|+|++|+++|++++|..||............   .     .....             
T Consensus       162 ~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (287)
T cd07840         162 VITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPK  241 (287)
T ss_pred             ccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhcccc
Confidence            45778999997764 45678999999999999999999998754422111100   0     00000             


Q ss_pred             C--------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHH
Q 041728           63 M--------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        63 ~--------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                      .        ......+..+.+++.+||..+|.+||++++++..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         242 KPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             ccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            0        0011113568899999999999999999988543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.54  E-value=3.6e-15  Score=87.87  Aligned_cols=94  Identities=15%  Similarity=0.077  Sum_probs=63.7

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc---------------------C-CC-
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL---------------------P-IP-   59 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~-~~-   59 (108)
                      ..+++.|++||.+... .++.++|+||+|++++++++|..||............                     . .. 
T Consensus       166 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (293)
T cd07843         166 LVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTF  245 (293)
T ss_pred             ccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhccccc
Confidence            3467789999988654 3578899999999999999999988754322211100                     0 00 


Q ss_pred             ---CC---cCCCCCC-CchHHHHHHhhhcCCCCCCCCCHhhHHHH
Q 041728           60 ---LD---EMLDPRL-PPDPLFDVAFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        60 ---~~---~~~~~~~-~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                         ..   ....+.. ....+.+++.+||+.+|++||++.+++.+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         246 TKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             ccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence               00   0001111 23568899999999999999999998543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.54  E-value=1.1e-14  Score=86.15  Aligned_cols=87  Identities=14%  Similarity=0.097  Sum_probs=70.2

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      +++||||-|+|||++....|...+|+|.+|+++|+|+-|+.||.+..+......+..  .++-.|+...++...++.+++
T Consensus       326 kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~--ed~kFPr~ls~eAktLLsGLL  403 (516)
T KOG0690|consen  326 KTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILM--EDLKFPRTLSPEAKTLLSGLL  403 (516)
T ss_pred             ccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHh--hhccCCccCCHHHHHHHHHHh
Confidence            579999999999999999999999999999999999999999987765443332221  233334445578999999999


Q ss_pred             CCCCCCCCC
Q 041728           82 NGNPESRLI   90 (108)
Q Consensus        82 ~~~p~~Rp~   90 (108)
                      .+||.+|..
T Consensus       404 ~kdP~kRLG  412 (516)
T KOG0690|consen  404 KKDPKKRLG  412 (516)
T ss_pred             hcChHhhcC
Confidence            999999963

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.54  E-value=6.4e-15  Score=88.72  Aligned_cols=97  Identities=13%  Similarity=0.088  Sum_probs=67.2

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc---CCC--------------------
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL---PIP--------------------   59 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--------------------   59 (108)
                      ..++..|++||.+.. ..++.++|+||+|++++++++|..||.+..........   ...                    
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (343)
T cd07851         175 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQS  254 (343)
T ss_pred             CcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHh
Confidence            457788999998764 35678899999999999999999998754432221110   000                    


Q ss_pred             CCc-------CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           60 LDE-------MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        60 ~~~-------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ...       ...+.. ...+.+++.+||..+|.+||++.+|..+.++.
T Consensus       255 ~~~~~~~~~~~~~~~~-s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~  302 (343)
T cd07851         255 LPQMPKKDFKEVFSGA-NPLAIDLLEKMLVLDPDKRITAAEALAHPYLA  302 (343)
T ss_pred             ccccCCCCHHHHhccC-CHHHHHHHHHhCCCChhhCCCHHHHhcCCCcc
Confidence            000       001112 36688999999999999999999996655554

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.53  E-value=1.1e-14  Score=87.28  Aligned_cols=96  Identities=19%  Similarity=0.118  Sum_probs=65.6

Q ss_pred             ccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh----cCCCCC----------------cC
Q 041728            5 LLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH----LPIPLD----------------EM   63 (108)
Q Consensus         5 ~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----------------~~   63 (108)
                      .++..|++||.+.+. .++.++|+|++|++++++++|..|+.+.........    ......                ..
T Consensus       194 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (335)
T PTZ00024        194 VVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPR  273 (335)
T ss_pred             ccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcC
Confidence            356789999988653 467889999999999999999999875543221110    000000                00


Q ss_pred             C-------CCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           64 L-------DPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        64 ~-------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .       .+. ....+.+++..||..+|++||++++++.++++.
T Consensus       274 ~~~~~~~~~~~-~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~  317 (335)
T PTZ00024        274 KPKDLKTIFPN-ASDDAIDLLQSLLKLNPLERISAKEALKHEYFK  317 (335)
T ss_pred             CcccHHHhCcC-CChHHHHHHHHHcCCCchhccCHHHHhcCcccC
Confidence            0       011 125688999999999999999999996555543

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.52  E-value=1.6e-14  Score=90.87  Aligned_cols=98  Identities=11%  Similarity=-0.039  Sum_probs=64.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCC-CCCcch--hH----HhhhhcCCCCC---------------
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKH-PRDQMF--FL----QFQLHLPIPLD---------------   61 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~-~~~~~~--~~----~~~~~~~~~~~---------------   61 (108)
                      ..||+.|++||.+.+..++.++||||+|+++|+++++.. |+....  ..    ...........               
T Consensus       328 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~  407 (501)
T PHA03210        328 WVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDS  407 (501)
T ss_pred             ccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhh
Confidence            568999999999988889999999999999999998654 443211  10    00000000000               


Q ss_pred             -----------cCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           62 -----------EMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        62 -----------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                                 ........+..+.+++.+|++.||.+||++.|++.+.++.
T Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~  458 (501)
T PHA03210        408 AEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFS  458 (501)
T ss_pred             hhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhh
Confidence                       0000001124467788999999999999999997666543

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.52  E-value=2.6e-14  Score=83.77  Aligned_cols=92  Identities=10%  Similarity=0.016  Sum_probs=62.5

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----C---------------------
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----P---------------------   57 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~---------------------   57 (108)
                      ..++..|++||.+.. ..++.++|+||+|++++++++|..++............    .                     
T Consensus       158 ~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T cd07830         158 YVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRF  237 (283)
T ss_pred             CCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccc
Confidence            356788999998754 45678999999999999999999888644322111000    0                     


Q ss_pred             -CCC---CcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHH
Q 041728           58 -IPL---DEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDG   96 (108)
Q Consensus        58 -~~~---~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~   96 (108)
                       ...   .....+.. ...+.+++.+||+.+|++||+++++..
T Consensus       238 ~~~~~~~~~~~~~~~-~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         238 PQFAPTSLHQLIPNA-SPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             cccccccHHHHcccC-CHHHHHHHHHhcccCcccCCCHHHHhh
Confidence             000   00000111 256889999999999999999999843

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.52  E-value=1e-14  Score=86.14  Aligned_cols=97  Identities=12%  Similarity=0.020  Sum_probs=65.0

Q ss_pred             ccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcC------------------CCCCcC--
Q 041728            5 LLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP------------------IPLDEM--   63 (108)
Q Consensus         5 ~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~--   63 (108)
                      .+++.|++||.+.. ..++.++|+|++|++++++++|..++.............                  ......  
T Consensus       163 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (298)
T cd07841         163 VVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPF  242 (298)
T ss_pred             ccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccccccc
Confidence            35677999998754 456788999999999999999977765433221111000                  000000  


Q ss_pred             -------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           64 -------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        64 -------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                             ..... ...+.+++.+||..+|++||++++++.++++..
T Consensus       243 ~~~~~~~~~~~~-~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~  287 (298)
T cd07841         243 PPTPLKQIFPAA-SDDALDLLQRLLTLNPNKRITARQALEHPYFSN  287 (298)
T ss_pred             CCcchhhhcccc-cHHHHHHHHHHhcCCcccCcCHHHHhhCccccC
Confidence                   00111 256889999999999999999999976666654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.52  E-value=1.5e-14  Score=84.59  Aligned_cols=92  Identities=16%  Similarity=0.146  Sum_probs=63.7

Q ss_pred             ccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc---------------------CCCCCc
Q 041728            5 LLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL---------------------PIPLDE   62 (108)
Q Consensus         5 ~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~   62 (108)
                      .++..|++||.+... .++.++|+|++|++++++++|..||............                     ......
T Consensus       159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (282)
T cd07829         159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK  238 (282)
T ss_pred             ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccc
Confidence            346679999988765 6788999999999999999998888654322111100                     000000


Q ss_pred             -------CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHH
Q 041728           63 -------MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        63 -------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                             ...+.. +..+.+++..||..+|++||++.++..+
T Consensus       239 ~~~~~~~~~~~~~-~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  279 (282)
T cd07829         239 FPPKDLEKVLPRL-DPEGIDLLSKMLQYNPAKRISAKEALKH  279 (282)
T ss_pred             cCccchHHhcccc-cHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence                   001122 2568999999999999999999998543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.51  E-value=2.7e-14  Score=84.08  Aligned_cols=92  Identities=18%  Similarity=0.143  Sum_probs=62.0

Q ss_pred             ccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh-h------------------cCCCCCc--
Q 041728            5 LLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL-H------------------LPIPLDE--   62 (108)
Q Consensus         5 ~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~-~------------------~~~~~~~--   62 (108)
                      .+++.|++||.+.+ ..++.++|+||+|+++|++++|..||.......... .                  .......  
T Consensus       164 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (291)
T cd07870         164 VVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWF  243 (291)
T ss_pred             cccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhc
Confidence            46788999998865 346788999999999999999999987543211100 0                  0000000  


Q ss_pred             -C--------CCCCC-CchHHHHHHhhhcCCCCCCCCCHhhHHH
Q 041728           63 -M--------LDPRL-PPDPLFDVAFSCLNGNPESRLIITLTDG   96 (108)
Q Consensus        63 -~--------~~~~~-~~~~~~~l~~~c~~~~p~~Rp~~~~l~~   96 (108)
                       .        ..... ....+.+++..|+..||.+||++.++..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         244 LPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             cccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence             0        00011 1246889999999999999999999843

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.51  E-value=3.3e-14  Score=84.11  Aligned_cols=100  Identities=17%  Similarity=0.119  Sum_probs=71.3

Q ss_pred             cccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh------------------------hc
Q 041728            2 TDILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL------------------------HL   56 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~------------------------~~   56 (108)
                      |..+-|.+|.|||.+.. ..|+...||||.||++-|+++|++-|.+.+...-+.                        ++
T Consensus       185 TeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi  264 (359)
T KOG0660|consen  185 TEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYI  264 (359)
T ss_pred             hcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHH
Confidence            45678899999998764 678999999999999999999999887654221111                        00


Q ss_pred             ---CCC---CCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           57 ---PIP---LDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        57 ---~~~---~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                         +..   ......|... ....+++++++..||.+|.|++|.+.+..+..
T Consensus       265 ~slp~~p~~~f~~~fp~a~-p~AidLlekmL~fdP~kRita~eAL~hPYl~~  315 (359)
T KOG0660|consen  265 KSLPQIPKQPFSSIFPNAN-PLAIDLLEKMLVFDPKKRITAEEALAHPYLAP  315 (359)
T ss_pred             HhCCCCCCCCHHHHcCCCC-HHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence               000   0000112222 55889999999999999999999877766654

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.51  E-value=1.1e-13  Score=83.90  Aligned_cols=95  Identities=36%  Similarity=0.542  Sum_probs=70.4

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcc------hhHHhhh--hcCCCCCcCCCCCCC----c--
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQM------FFLQFQL--HLPIPLDEMLDPRLP----P--   70 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~~~~----~--   70 (108)
                      .||.+|++||+...+..+.++||||||+++.|+++|+.+.+..      ....|..  .......+.+++.+.    .  
T Consensus       239 ~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~  318 (361)
T KOG1187|consen  239 MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDE  318 (361)
T ss_pred             CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChH
Confidence            7999999999998889999999999999999999998776632      1233322  222234555666543    1  


Q ss_pred             ---hHHHHHHhhhcCCCCCCCCCHhhH-HHHHH
Q 041728           71 ---DPLFDVAFSCLNGNPESRLIITLT-DGLKR   99 (108)
Q Consensus        71 ---~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~   99 (108)
                         ..+..+...|++.++..||+|.+| ..|+.
T Consensus       319 ~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~  351 (361)
T KOG1187|consen  319 KEVKKLAELALRCLRPDPKERPTMSQVVKELEG  351 (361)
T ss_pred             HHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHh
Confidence               126677889999999999999998 55543

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.51  E-value=3.7e-14  Score=83.42  Aligned_cols=89  Identities=16%  Similarity=0.076  Sum_probs=62.1

Q ss_pred             cccccceecccccccCC--CcccccchhhhHHHHHHHhCCCCCCcchh---HHhhh-hcCCCCCcCCCCCCCchHHHHHH
Q 041728            4 ILLEFMNFFEGLAYTIK--ITEKYDVYSFGVLVLEVIKGKHPRDQMFF---LQFQL-HLPIPLDEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~--~~~~~di~s~g~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~l~   77 (108)
                      ..|+..|++||.+....  .+.++|+|++|++++++++|..|+.....   ..... ..... .... +...+..+.+++
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~l~~li  243 (288)
T cd05583         166 FCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS-KPPF-PKTMSAEARDFI  243 (288)
T ss_pred             ccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc-CCCC-CcccCHHHHHHH
Confidence            35788999999887554  67889999999999999999999853211   11111 11111 1111 222236789999


Q ss_pred             hhhcCCCCCCCCCHhhH
Q 041728           78 FSCLNGNPESRLIITLT   94 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l   94 (108)
                      .+||+.+|+.||++.++
T Consensus       244 ~~~l~~~p~~R~t~~~~  260 (288)
T cd05583         244 QKLLEKDPKKRLGANGA  260 (288)
T ss_pred             HHHhcCCHhhccCcchH
Confidence            99999999999998776

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.50  E-value=1.9e-15  Score=89.99  Aligned_cols=100  Identities=18%  Similarity=0.216  Sum_probs=69.9

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHh---hhhcCCCCC-----------------
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQF---QLHLPIPLD-----------------   61 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----------------   61 (108)
                      +..+.|-.|.|||++.+..++.++|+||+||+++|+.+|..-|+.....+-   ...+....+                 
T Consensus       267 s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~r  346 (415)
T KOG0671|consen  267 STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGR  346 (415)
T ss_pred             ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhccc
Confidence            456788999999999999999999999999999999999887775431110   000000000                 


Q ss_pred             -------------cCCCCCCC-----------chHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           62 -------------EMLDPRLP-----------PDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        62 -------------~~~~~~~~-----------~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                                   ...++..+           ...+.+|+++++..||.+|.|+.|.+.+.+..
T Consensus       347 ldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~  410 (415)
T KOG0671|consen  347 LDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFA  410 (415)
T ss_pred             ccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhh
Confidence                         00000000           02389999999999999999999987666554

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.50  E-value=3.2e-14  Score=85.30  Aligned_cols=96  Identities=16%  Similarity=0.038  Sum_probs=65.7

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---------------------------h
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---------------------------H   55 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---------------------------~   55 (108)
                      ..++..|++||.+.. ..++.++|+|++|++++++++|..||..........                           .
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (328)
T cd07856         165 YVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQS  244 (328)
T ss_pred             CcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhh
Confidence            346778999998765 457889999999999999999999886543211100                           0


Q ss_pred             cCCCCCcC---CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           56 LPIPLDEM---LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        56 ~~~~~~~~---~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ........   ..+.. +..+.+++.+||+.+|++||++++++..+++
T Consensus       245 ~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~~P~~R~t~~ell~~~~~  291 (328)
T cd07856         245 LPKREPVPFSEKFKNA-DPSAIDLLEKMLVFDPQKRISAAEALAHPYL  291 (328)
T ss_pred             ccccCCCcHHHHcCCC-CHHHHHHHHHHcCCChhhCCCHHHHhcCCcc
Confidence            00000000   01122 2669999999999999999999998655544

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.50  E-value=1.7e-14  Score=85.29  Aligned_cols=91  Identities=18%  Similarity=0.103  Sum_probs=62.5

Q ss_pred             ccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---hc-CCC----CCc-------------
Q 041728            5 LLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---HL-PIP----LDE-------------   62 (108)
Q Consensus         5 ~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~----~~~-------------   62 (108)
                      .++..|++||.+.. ..++.++|+|++|++++++++|+.||..........   .. ...    ...             
T Consensus       178 ~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (302)
T cd07864         178 VITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPK  257 (302)
T ss_pred             eeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccc
Confidence            34677999998764 346788999999999999999999987543222111   00 000    000             


Q ss_pred             --------CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHH
Q 041728           63 --------MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDG   96 (108)
Q Consensus        63 --------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~   96 (108)
                              .....+ +..+.+++..||..+|.+||++++++.
T Consensus       258 ~~~~~~~~~~~~~~-~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         258 KQYRRRLREEFSFI-PTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             cccccchhhhcCCC-CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                    001122 367999999999999999999998854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.49  E-value=4.2e-14  Score=84.86  Aligned_cols=96  Identities=9%  Similarity=-0.060  Sum_probs=63.7

Q ss_pred             cccccceeccccccc-----CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC--CCc--CCCCCCCchHHH
Q 041728            4 ILLEFMNFFEGLAYT-----IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP--LDE--MLDPRLPPDPLF   74 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~   74 (108)
                      ..||+.|+|||.+..     ..++.++|+||+|+++|++++|..||...............  ...  ...+.+ +..+.
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~  241 (331)
T cd05597         163 AVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDV-SEEAK  241 (331)
T ss_pred             eeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCC-CHHHH
Confidence            358999999998863     34677899999999999999999999866544332221111  111  111222 36788


Q ss_pred             HHHhhhcCCCC--CCCCCHhhHHHHHHH
Q 041728           75 DVAFSCLNGNP--ESRLIITLTDGLKRL  100 (108)
Q Consensus        75 ~l~~~c~~~~p--~~Rp~~~~l~~l~~l  100 (108)
                      +++.+|+..++  ..|+++.++..+.++
T Consensus       242 ~li~~ll~~~~~r~~r~~~~~~l~hp~~  269 (331)
T cd05597         242 DLIRRLICSPETRLGRNGLQDFKDHPFF  269 (331)
T ss_pred             HHHHHHccCcccccCCCCHHHHhcCCCC
Confidence            99998775433  337788888555443

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.49  E-value=3.3e-14  Score=81.67  Aligned_cols=83  Identities=19%  Similarity=0.138  Sum_probs=59.3

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      .++..|++||......++.++|+|++|++++++++|..++...... .    .. ......+...+..+.+++.+|++.|
T Consensus       143 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-~----~~-~~~~~~~~~~~~~~~~li~~~l~~d  216 (237)
T cd05576         143 AVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-I----NT-HTTLNIPEWVSEEARSLLQQLLQFN  216 (237)
T ss_pred             CcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-c----cc-ccccCCcccCCHHHHHHHHHHccCC
Confidence            3566799999988777888999999999999999998776432110 0    00 0111112223367999999999999


Q ss_pred             CCCCCCHhh
Q 041728           85 PESRLIITL   93 (108)
Q Consensus        85 p~~Rp~~~~   93 (108)
                      |.+|+++.+
T Consensus       217 p~~R~~~~~  225 (237)
T cd05576         217 PTERLGAGV  225 (237)
T ss_pred             HHHhcCCCc
Confidence            999999743

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.48  E-value=6.4e-14  Score=81.30  Aligned_cols=93  Identities=14%  Similarity=0.223  Sum_probs=69.4

Q ss_pred             ccceecccccccCCC--c-ccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCC-CCCcCCCCCCCchHHHHHHhhhcC
Q 041728            7 EFMNFFEGLAYTIKI--T-EKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPI-PLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         7 ~~~~~ape~~~~~~~--~-~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      .|.||+||.+....-  + ..+|+|||++++||+-+...||....+.++--.+.- +.....+|.+. .....+|.-|+.
T Consensus       349 ~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis-~hm~klm~icmn  427 (448)
T KOG0195|consen  349 SPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGIS-RHMNKLMNICMN  427 (448)
T ss_pred             CcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCcc-HHHHHHHHHHhc
Confidence            578999999875442  2 578999999999999999999998887766443322 22222333333 668899999999


Q ss_pred             CCCCCCCCHhhH-HHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l  100 (108)
                      .||.+||.|+.| -.|+++
T Consensus       428 edpgkrpkfdmivpilekm  446 (448)
T KOG0195|consen  428 EDPGKRPKFDMIVPILEKM  446 (448)
T ss_pred             CCCCcCCCcceehhhHHHh
Confidence            999999999998 545543

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.48  E-value=3.7e-14  Score=85.09  Aligned_cols=94  Identities=11%  Similarity=0.000  Sum_probs=62.7

Q ss_pred             cccccceeccccccc-----CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCC-CCCC--CchHHHH
Q 041728            4 ILLEFMNFFEGLAYT-----IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEML-DPRL--PPDPLFD   75 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~   75 (108)
                      ..|++.|+|||.+..     ..++.++|+||+|+++|++++|..||...+................ .+..  ....+.+
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~  242 (331)
T cd05624         163 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKD  242 (331)
T ss_pred             ccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHH
Confidence            468999999998864     4577889999999999999999999986654443332211111111 1111  1367899


Q ss_pred             HHhhhcCCCCCC--CCCHhhHHHH
Q 041728           76 VAFSCLNGNPES--RLIITLTDGL   97 (108)
Q Consensus        76 l~~~c~~~~p~~--Rp~~~~l~~l   97 (108)
                      ++.+|+..++..  |++++++..+
T Consensus       243 li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         243 LIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             HHHHHccCchhhcCCCCHHHHhcC
Confidence            999988765443  3567766443

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.48  E-value=6.8e-14  Score=82.05  Aligned_cols=92  Identities=16%  Similarity=0.116  Sum_probs=62.5

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc---------------C------CCCC
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL---------------P------IPLD   61 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~---------------~------~~~~   61 (108)
                      ..++..|++||.+.. ..++.++|+|++|+++|++++|..||.+..........               .      ....
T Consensus       160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd07836         160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFP  239 (284)
T ss_pred             ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccccc
Confidence            346778999998765 34678899999999999999999988754322111100               0      0000


Q ss_pred             c-------CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHH
Q 041728           62 E-------MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDG   96 (108)
Q Consensus        62 ~-------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~   96 (108)
                      .       ...+.. +..+.+++.+|++.+|.+||++.++..
T Consensus       240 ~~~~~~~~~~~~~~-~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         240 RYPPQDLQQLFPHA-DPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             CCChHHHHHHhhhc-CcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            0       000122 255889999999999999999998853

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.47  E-value=1.3e-13  Score=83.20  Aligned_cols=99  Identities=10%  Similarity=0.063  Sum_probs=67.0

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---h------------cC----------
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---H------------LP----------   57 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---~------------~~----------   57 (108)
                      ..++..|+|||.+.. ..++.++|+|++|++++++++|..||..........   .            ..          
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (345)
T cd07877         177 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS  256 (345)
T ss_pred             cccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHH
Confidence            457888999998765 457788999999999999999999886433211100   0            00          


Q ss_pred             -CCCCcCC-C--CCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           58 -IPLDEML-D--PRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        58 -~~~~~~~-~--~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                       ....... .  ....+..+.+++..|++.+|.+|+++.+++.+.++..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~  305 (345)
T cd07877         257 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ  305 (345)
T ss_pred             hcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence             0000000 0  0011356889999999999999999999976666654

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.47  E-value=3.7e-14  Score=83.47  Aligned_cols=92  Identities=13%  Similarity=0.143  Sum_probs=60.9

Q ss_pred             ccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhH-Hh---hhhc-CC------------------CC
Q 041728            5 LLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL-QF---QLHL-PI------------------PL   60 (108)
Q Consensus         5 ~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~-~~---~~~~-~~------------------~~   60 (108)
                      .++..|++||.+.. ..++.++|+||+|+++|++++|..||...... ..   .... ..                  ..
T Consensus       164 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (291)
T cd07844         164 VVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSF  243 (291)
T ss_pred             ccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccc
Confidence            35778999998865 45778899999999999999999998644311 00   0000 00                  00


Q ss_pred             ----CcCC---CCCCC-chHHHHHHhhhcCCCCCCCCCHhhHHH
Q 041728           61 ----DEML---DPRLP-PDPLFDVAFSCLNGNPESRLIITLTDG   96 (108)
Q Consensus        61 ----~~~~---~~~~~-~~~~~~l~~~c~~~~p~~Rp~~~~l~~   96 (108)
                          ....   .+.+. ...+.+++.+|+..+|++||++.+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         244 PFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             cccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence                0000   00111 145789999999999999999998843

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.47  E-value=1.1e-13  Score=82.23  Aligned_cols=93  Identities=14%  Similarity=0.111  Sum_probs=62.0

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHH------------hhh-hc-------------
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ------------FQL-HL-------------   56 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~------------~~~-~~-------------   56 (108)
                      ..++..|+|||.+.+ ..++.++|+|++|++++++++|..||.+.....            ... ..             
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  254 (316)
T cd07842         175 VVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKK  254 (316)
T ss_pred             ccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhh
Confidence            356788999998765 357788999999999999999999886432110            000 00             


Q ss_pred             ----CC---CCCcCCCC-----------CCCchHHHHHHhhhcCCCCCCCCCHhhHHH
Q 041728           57 ----PI---PLDEMLDP-----------RLPPDPLFDVAFSCLNGNPESRLIITLTDG   96 (108)
Q Consensus        57 ----~~---~~~~~~~~-----------~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~   96 (108)
                          ..   .......+           ......+.+++..|++.+|++||++.++..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         255 MPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             cccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence                00   00000001           012245889999999999999999999854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.44  E-value=7e-14  Score=81.70  Aligned_cols=99  Identities=16%  Similarity=0.128  Sum_probs=75.2

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh----hcCCCCCcCCCCCCCc--hHHHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL----HLPIPLDEMLDPRLPP--DPLFDV   76 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~l   76 (108)
                      +-+-||+|.|||++-..+|+..+|+||+|+++|-++-|.+||.+.+......    .+..+......+.+..  +...++
T Consensus       222 TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdl  301 (400)
T KOG0604|consen  222 TPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDL  301 (400)
T ss_pred             CCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHH
Confidence            3456899999999988889999999999999999999999998665322111    2333444444444332  558899


Q ss_pred             HhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           77 AFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      +++++..+|++|.++.++..+.+|-
T Consensus       302 IR~LLkt~PteRlTI~~~m~hpwi~  326 (400)
T KOG0604|consen  302 IRKLLKTEPTERLTIEEVMDHPWIN  326 (400)
T ss_pred             HHHHhcCCchhheeHHHhhcCchhc
Confidence            9999999999999999986666654

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.43  E-value=2.6e-13  Score=78.00  Aligned_cols=97  Identities=14%  Similarity=0.084  Sum_probs=69.8

Q ss_pred             ccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh---------------------------c
Q 041728            5 LLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH---------------------------L   56 (108)
Q Consensus         5 ~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~   56 (108)
                      +-|.+|.|||.+.+ ..|...+|+||.||++-|++.+.+-|.+.+..+-...                           .
T Consensus       162 V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~  241 (318)
T KOG0659|consen  162 VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQF  241 (318)
T ss_pred             eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcC
Confidence            56789999998876 5688999999999999999998887776653321111                           1


Q ss_pred             CCCCCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           57 PIPLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        57 ~~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      +........+... ....+++.++|..||.+|.+++|.++++.+..
T Consensus       242 P~~~~~~lf~aas-~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~  286 (318)
T KOG0659|consen  242 PKPPLNNLFPAAS-SDALDLLSKMLTYNPKKRITASQALKHPYFKS  286 (318)
T ss_pred             CCCcccccccccc-HHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence            1111111222222 44789999999999999999999977776653

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.43  E-value=2.4e-13  Score=82.00  Aligned_cols=98  Identities=16%  Similarity=0.125  Sum_probs=67.3

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh---cCCC--------------------
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH---LPIP--------------------   59 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------------------   59 (108)
                      ..+++.|++||.+.. ..++.++|+|++|++++++++|..||...........   ....                    
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (343)
T cd07880         175 YVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKK  254 (343)
T ss_pred             cccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHh
Confidence            456788999998865 3577889999999999999999999875432211110   0000                    


Q ss_pred             CC-------cCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           60 LD-------EMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        60 ~~-------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ..       ....+... ..+.+++.+|+..+|.+||++.+++.+.++..
T Consensus       255 ~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~  303 (343)
T cd07880         255 LPRFRKKDFRSLLPNAN-PLAVNVLEKMLVLDAESRITAAEALAHPYFEE  303 (343)
T ss_pred             ccccCcchHHHhccCCC-hHHHHHHHHHcCCChhhCCCHHHHhcCccHhh
Confidence            00       00011222 45889999999999999999999866666554

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.43  E-value=1.7e-13  Score=81.67  Aligned_cols=89  Identities=18%  Similarity=0.145  Sum_probs=62.5

Q ss_pred             CcccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch-------hHHhhh-hcCCCCCcCCCCCCCchH
Q 041728            1 MTDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF-------FLQFQL-HLPIPLDEMLDPRLPPDP   72 (108)
Q Consensus         1 ~~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~   72 (108)
                      +++++|||.|.|||.+.+..|..++|+|++|+++++|+.|+.||+-..       .-.... .+.....++  |+-..-.
T Consensus       408 tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiri--prslsvk  485 (593)
T KOG0695|consen  408 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRI--PRSLSVK  485 (593)
T ss_pred             cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccc--cceeehh
Confidence            368999999999999999999999999999999999999999997321       001111 111111111  1111233


Q ss_pred             HHHHHhhhcCCCCCCCCCH
Q 041728           73 LFDVAFSCLNGNPESRLII   91 (108)
Q Consensus        73 ~~~l~~~c~~~~p~~Rp~~   91 (108)
                      ...+++..+.+||.+|..+
T Consensus       486 as~vlkgflnkdp~erlgc  504 (593)
T KOG0695|consen  486 ASHVLKGFLNKDPKERLGC  504 (593)
T ss_pred             hHHHHHHhhcCCcHHhcCC
Confidence            5677888899999999753

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.42  E-value=6.2e-13  Score=88.68  Aligned_cols=90  Identities=19%  Similarity=0.101  Sum_probs=66.4

Q ss_pred             cccccccceecccccccC---CCcccccchhhhHHHHHHHhCCCCCC-cchhHHhhhhcCCCCCcCC----CCCCCchHH
Q 041728            2 TDILLEFMNFFEGLAYTI---KITEKYDVYSFGVLVLEVIKGKHPRD-QMFFLQFQLHLPIPLDEML----DPRLPPDPL   73 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~---~~~~~~di~s~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~   73 (108)
                      |+.+||-.|+|||.+...   .|+.++|+||+|++++||+..   |. ++.....+..+..+..+..    .+..  ..-
T Consensus       773 Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP---F~TsMERa~iL~~LR~g~iP~~~~f~~~~~--~~e  847 (1351)
T KOG1035|consen  773 TSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP---FGTSMERASILTNLRKGSIPEPADFFDPEH--PEE  847 (1351)
T ss_pred             ccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhcc---CCchHHHHHHHHhcccCCCCCCcccccccc--hHH
Confidence            578899999999998763   599999999999999999864   33 5555555554443322222    2222  336


Q ss_pred             HHHHhhhcCCCCCCCCCHhhHHH
Q 041728           74 FDVAFSCLNGNPESRLIITLTDG   96 (108)
Q Consensus        74 ~~l~~~c~~~~p~~Rp~~~~l~~   96 (108)
                      +.++..+++.||.+|||+.+++.
T Consensus       848 ~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  848 ASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             HHHHHHHhcCCCccCCCHHHHhh
Confidence            68899999999999999999843

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.42  E-value=1.5e-13  Score=87.10  Aligned_cols=99  Identities=10%  Similarity=0.045  Sum_probs=77.3

Q ss_pred             cccccccceecccccc---cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC---CCcCCCCCCCchHHHH
Q 041728            2 TDILLEFMNFFEGLAY---TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP---LDEMLDPRLPPDPLFD   75 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~---~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   75 (108)
                      .+++||++|||||+..   .+.|+..+|+|+.|+...++..-++|....++.+........   .+...++......+.+
T Consensus       170 ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~  249 (829)
T KOG0576|consen  170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHN  249 (829)
T ss_pred             hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHH
Confidence            4689999999999775   366889999999999999998888888888877766632222   2334455555577999


Q ss_pred             HHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      |++.++.++|.+||+++.++.+..+
T Consensus       250 fvK~altknpKkRptaeklL~h~fv  274 (829)
T KOG0576|consen  250 FVKGALTKNPKKRPTAEKLLQHPFV  274 (829)
T ss_pred             HHHHHhcCCCccCCChhhheeceee
Confidence            9999999999999999887444444

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.40  E-value=3.9e-13  Score=79.17  Aligned_cols=91  Identities=15%  Similarity=0.072  Sum_probs=61.6

Q ss_pred             cccccceecccccccC--CCcccccchhhhHHHHHHHhCCCCCCcchh----HHhhhhcCCCCCcCCCCCCCchHHHHHH
Q 041728            4 ILLEFMNFFEGLAYTI--KITEKYDVYSFGVLVLEVIKGKHPRDQMFF----LQFQLHLPIPLDEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~--~~~~~~di~s~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~   77 (108)
                      ..|+..|++||.+...  .++.++|+|++|+++|++++|..|+.....    ........... ... +......+.+++
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~ll  243 (290)
T cd05613         166 FCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE-PPY-PQEMSALAKDII  243 (290)
T ss_pred             ccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccC-CCC-CccCCHHHHHHH
Confidence            4578899999988643  456789999999999999999999863221    11111111111 111 222336689999


Q ss_pred             hhhcCCCCCCCC-----CHhhHHH
Q 041728           78 FSCLNGNPESRL-----IITLTDG   96 (108)
Q Consensus        78 ~~c~~~~p~~Rp-----~~~~l~~   96 (108)
                      .+||..+|++|+     +++++..
T Consensus       244 ~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         244 QRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             HHHhcCCHHHhcCCCCCCHHHHHc
Confidence            999999999997     5565543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.38  E-value=1.1e-13  Score=89.21  Aligned_cols=95  Identities=18%  Similarity=0.026  Sum_probs=68.6

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      +...||-+|+|||.+...+-..++||+++||++|+.++ |.+||......+.-....+.....+.+... .+..+++.++
T Consensus       672 s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L~~~~d-~eA~dLI~~m  750 (903)
T KOG1027|consen  672 SGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVHLEPLPD-CEAKDLISRM  750 (903)
T ss_pred             cCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceeeeccCch-HHHHHHHHHh
Confidence            45779999999999998777789999999999999888 688987554333221111111111122211 2789999999


Q ss_pred             cCCCCCCCCCHhhHHHH
Q 041728           81 LNGNPESRLIITLTDGL   97 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l   97 (108)
                      +..+|..||++.+|+.+
T Consensus       751 l~~dP~~RPsa~~VL~H  767 (903)
T KOG1027|consen  751 LNPDPQLRPSATDVLNH  767 (903)
T ss_pred             cCCCcccCCCHHHHhCC
Confidence            99999999999998543

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.38  E-value=4.7e-13  Score=84.08  Aligned_cols=45  Identities=11%  Similarity=0.118  Sum_probs=40.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF   48 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~   48 (108)
                      .+-+..|.|||++.+.+|+.+.|+||+||++.||++|.+-|.+.+
T Consensus       348 YiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n  392 (586)
T KOG0667|consen  348 YIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN  392 (586)
T ss_pred             eeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence            345678999999999999999999999999999999988777654

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.34  E-value=8.1e-13  Score=84.26  Aligned_cols=99  Identities=11%  Similarity=0.129  Sum_probs=59.8

Q ss_pred             ccccccceecccccccC----------------------CCcccccchhhhHHHHHHHhCCCCCCcchh-----------
Q 041728            3 DILLEFMNFFEGLAYTI----------------------KITEKYDVYSFGVLVLEVIKGKHPRDQMFF-----------   49 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~----------------------~~~~~~di~s~g~~~~~~~~~~~~~~~~~~-----------   49 (108)
                      .+.+++.|+|||.+...                      .+..++||||+|+++|+++.+..+......           
T Consensus       316 ~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~  395 (566)
T PLN03225        316 EFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDY  395 (566)
T ss_pred             ccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCC
Confidence            45688999999965322                      133456999999999999986655432210           


Q ss_pred             --HHhhhhcCCCCCcC----CC-CCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           50 --LQFQLHLPIPLDEM----LD-PRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        50 --~~~~~~~~~~~~~~----~~-~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                        ..+...........    .. .........+|+..|++.||.+||++++++.+.++.
T Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~  454 (566)
T PLN03225        396 DLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFD  454 (566)
T ss_pred             cHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcC
Confidence              00000000000000    00 000112356899999999999999999997666653

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.32  E-value=7.2e-13  Score=82.94  Aligned_cols=96  Identities=15%  Similarity=0.015  Sum_probs=73.1

Q ss_pred             cccccccceecccccccCCCc-ccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            2 TDILLEFMNFFEGLAYTIKIT-EKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~-~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      .+++|++.|.|||.+.+..|. ..+|+|++|+++|.+..|..||++.+..........+..++.  .....++.+++.++
T Consensus       212 qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp--~~ms~dce~lLrk~  289 (596)
T KOG0586|consen  212 QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIP--FYMSCDCEDLLRKF  289 (596)
T ss_pred             cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeeccc--ceeechhHHHHHHh
Confidence            368999999999999988876 779999999999999999999997764333222222222222  22235689999999


Q ss_pred             cCCCCCCCCCHhhHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKR   99 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~   99 (108)
                      +..+|.+|++++++.+..+
T Consensus       290 lvl~Pskr~~~dqim~~~W  308 (596)
T KOG0586|consen  290 LVLNPSKRGPCDQIMKDRW  308 (596)
T ss_pred             hccCccccCCHHHhhhhcc
Confidence            9999999999999855444

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.31  E-value=3.2e-12  Score=75.52  Aligned_cols=98  Identities=10%  Similarity=0.053  Sum_probs=68.1

Q ss_pred             cccccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc--------CCCCCcC--------C
Q 041728            2 TDILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL--------PIPLDEM--------L   64 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~--------~   64 (108)
                      +..++|.+|.|||++.+. .|+..+|+||+||++.|++++++-|.+.+.......+        +..++..        .
T Consensus       178 t~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~  257 (323)
T KOG0594|consen  178 TPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAP  257 (323)
T ss_pred             cccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCcccccccccc
Confidence            456789999999999875 6899999999999999999998888876533221110        0001110        0


Q ss_pred             CCCC----------Cc--hHHHHHHhhhcCCCCCCCCCHhhHHHHHH
Q 041728           65 DPRL----------PP--DPLFDVAFSCLNGNPESRLIITLTDGLKR   99 (108)
Q Consensus        65 ~~~~----------~~--~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~   99 (108)
                      .+..          +.  ....+++..+++.+|.+|.+++..+.+..
T Consensus       258 f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~y  304 (323)
T KOG0594|consen  258 FPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPY  304 (323)
T ss_pred             CcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChh
Confidence            0111          10  24889999999999999999988754433

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.29  E-value=2.8e-12  Score=79.12  Aligned_cols=99  Identities=16%  Similarity=0.130  Sum_probs=68.9

Q ss_pred             cccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhH---HhhhhcCC----------CCC--cCCC
Q 041728            2 TDILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL---QFQLHLPI----------PLD--EMLD   65 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~----------~~~--~~~~   65 (108)
                      |..+-|.+|.+||.+.+ ..|...+|+||.||++.|++.|++.+++..-+   ..+.....          ..+  ....
T Consensus       277 T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~k  356 (560)
T KOG0600|consen  277 TSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFK  356 (560)
T ss_pred             ccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccC
Confidence            45667899999999987 56899999999999999999999999865422   11111100          000  1111


Q ss_pred             C------------CCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           66 P------------RLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        66 ~------------~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      +            ...+....+|+..+|..||++|.++.+.+..+.+
T Consensus       357 p~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF  403 (560)
T KOG0600|consen  357 PQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF  403 (560)
T ss_pred             CCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence            1            1111458899999999999999999887554443

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.28  E-value=4.3e-12  Score=75.25  Aligned_cols=101  Identities=15%  Similarity=0.096  Sum_probs=68.9

Q ss_pred             cccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHh---hhhc-----CCCCCcC---------
Q 041728            2 TDILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQF---QLHL-----PIPLDEM---------   63 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~---------   63 (108)
                      |..+-|.+|.|||.+.+ ..|+...|+||+||++-+++.+++-|.+..-..-   +...     ...++..         
T Consensus       235 T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~  314 (419)
T KOG0663|consen  235 TPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKM  314 (419)
T ss_pred             cceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhcc
Confidence            45667889999999987 4588999999999999999998888775542211   1100     0000000         


Q ss_pred             ---------CC---CCC-CchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           64 ---------LD---PRL-PPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        64 ---------~~---~~~-~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                               +.   +.. ..+..++++..++..||.+|-|+++-+++.++..
T Consensus       315 ~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e  366 (419)
T KOG0663|consen  315 TFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE  366 (419)
T ss_pred             ccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence                     00   011 1145789999999999999999998766665543

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.28  E-value=9.2e-12  Score=74.10  Aligned_cols=97  Identities=18%  Similarity=0.168  Sum_probs=68.4

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh----h--------cCC------------
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL----H--------LPI------------   58 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~----~--------~~~------------   58 (108)
                      ..-|..|.|||.+.+ ..|+.+.||||.||++.|++.|++-|.+.+...-+.    .        +..            
T Consensus       185 YicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~  264 (364)
T KOG0658|consen  185 YICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQ  264 (364)
T ss_pred             EEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcc
Confidence            345778999999987 568999999999999999999999998765321111    0        000            


Q ss_pred             ----CCCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           59 ----PLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        59 ----~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                          .+.+......+ .+..+++.++++.+|.+|-+..+++.+....
T Consensus       265 ik~~~~~~~~~~~~~-~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFd  310 (364)
T KOG0658|consen  265 IKAHPWHKVFFKRLP-PDALDLLSKLLQYSPSKRLSALEALAHPFFD  310 (364)
T ss_pred             cccccceeecccCCC-HHHHHHHHHHhccChhhcCCHHHHhcchhhH
Confidence                00011112222 6689999999999999999998885555443

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.27  E-value=5.4e-12  Score=83.98  Aligned_cols=97  Identities=14%  Similarity=0.028  Sum_probs=72.6

Q ss_pred             cccccccceecccccc----c-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCC--CCCchHHH
Q 041728            2 TDILLEFMNFFEGLAY----T-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDP--RLPPDPLF   74 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~----~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~   74 (108)
                      +..+|||-|.+||++.    + +.|..-+|+||+|+.+|+|+.|..||.+...+.++..+...-..+..|  ...+.+..
T Consensus       234 ~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeak  313 (1317)
T KOG0612|consen  234 SVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAK  313 (1317)
T ss_pred             ccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHH
Confidence            3568999999999886    2 678899999999999999999999999999888877554442222222  22337789


Q ss_pred             HHHhhhcCCCCCCCCC---HhhHHHHHH
Q 041728           75 DVAFSCLNGNPESRLI---ITLTDGLKR   99 (108)
Q Consensus        75 ~l~~~c~~~~p~~Rp~---~~~l~~l~~   99 (108)
                      +|+.+.+ .+++.|..   ++++..+.+
T Consensus       314 dLI~~ll-~~~e~RLgrngiedik~HpF  340 (1317)
T KOG0612|consen  314 DLIEALL-CDREVRLGRNGIEDIKNHPF  340 (1317)
T ss_pred             HHHHHHh-cChhhhcccccHHHHHhCcc
Confidence            9998876 45788877   777644433

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.22  E-value=8.8e-12  Score=76.80  Aligned_cols=93  Identities=19%  Similarity=0.173  Sum_probs=65.6

Q ss_pred             cccccccceecccccccC----CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh----cCCCCCcC-CCCCCCchH
Q 041728            2 TDILLEFMNFFEGLAYTI----KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH----LPIPLDEM-LDPRLPPDP   72 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~----~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~   72 (108)
                      +.+.||.+|+.||.+.-+    +.+.++|+||+|+++|..+.|+.||...-..+.+..    +...-... ..|.+. .+
T Consensus       638 SQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVs-se  716 (775)
T KOG1151|consen  638 SQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVS-SE  716 (775)
T ss_pred             cccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccC-HH
Confidence            467899999999988743    577899999999999999999999975432222221    11111111 123333 77


Q ss_pred             HHHHHhhhcCCCCCCCCCHhhHH
Q 041728           73 LFDVAFSCLNGNPESRLIITLTD   95 (108)
Q Consensus        73 ~~~l~~~c~~~~p~~Rp~~~~l~   95 (108)
                      ..+|+..|++.--++|...-++.
T Consensus       717 AkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  717 AKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             HHHHHHHHHHhhhhhhhhHHHHc
Confidence            99999999998888887766663

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.22  E-value=1.7e-11  Score=75.68  Aligned_cols=99  Identities=13%  Similarity=0.037  Sum_probs=65.9

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcc----------hhHHhhh---------hc-------
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQM----------FFLQFQL---------HL-------   56 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~----------~~~~~~~---------~~-------   56 (108)
                      .-+.|..|.|||++.+..|+..+||||++|++||+.||---|.-.          +....+.         ..       
T Consensus       410 ~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRd  489 (590)
T KOG1290|consen  410 EDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRD  489 (590)
T ss_pred             hhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHh
Confidence            345788999999999999999999999999999999985544311          1111100         00       


Q ss_pred             ----CCCCCcCCCCCCCc----------------hHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           57 ----PIPLDEMLDPRLPP----------------DPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        57 ----~~~~~~~~~~~~~~----------------~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                          .....++-.-...+                .++.+|+.-+++.+|++||++.+.+.+.+|-
T Consensus       490 FFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn  554 (590)
T KOG1290|consen  490 FFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLN  554 (590)
T ss_pred             hhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCcccc
Confidence                00001110001111                2378899999999999999999887666654

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.21  E-value=1.9e-11  Score=74.65  Aligned_cols=99  Identities=15%  Similarity=0.165  Sum_probs=60.8

Q ss_pred             ccccccceecccccccC----CCc--ccccchhhhHHHHHHHh----C------CCCCCcchhHH----hhh-hcCCCCC
Q 041728            3 DILLEFMNFFEGLAYTI----KIT--EKYDVYSFGVLVLEVIK----G------KHPRDQMFFLQ----FQL-HLPIPLD   61 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~----~~~--~~~di~s~g~~~~~~~~----~------~~~~~~~~~~~----~~~-~~~~~~~   61 (108)
                      ..+||..|||||++...    -|.  ..+||||||.++||+.-    |      +.||...-+.+    ... .......
T Consensus       379 ~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~  458 (513)
T KOG2052|consen  379 PRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKL  458 (513)
T ss_pred             CccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeeccc
Confidence            46899999999988642    232  45899999999999864    2      44554321111    000 1111111


Q ss_pred             cCCCCCCC-c----hHHHHHHhhhcCCCCCCCCCHhhH-HHHHHHH
Q 041728           62 EMLDPRLP-P----DPLFDVAFSCLNGNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        62 ~~~~~~~~-~----~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      ++..|... .    ..+.++|+.||..||..|.++=.+ ..+..+.
T Consensus       459 RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~  504 (513)
T KOG2052|consen  459 RPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS  504 (513)
T ss_pred             CCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence            22212211 1    237789999999999999998777 5555554

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.15  E-value=2.1e-12  Score=80.82  Aligned_cols=99  Identities=11%  Similarity=0.072  Sum_probs=70.9

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCC-CCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLD-PRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~c~   81 (108)
                      +++|||.|+|||++....|+.+-|+||.|+++|-.++|..||-+........+...-..+... ..+ ..+..+++.+++
T Consensus       725 sVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~ei-s~~AidlIn~LL  803 (888)
T KOG4236|consen  725 SVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEI-SPEAIDLINNLL  803 (888)
T ss_pred             hhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhc-CHHHHHHHHHHH
Confidence            578999999999999999999999999999999888999999765433222111111111111 112 256889999999


Q ss_pred             CCCCCCCCCHhhHHHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      +..-.+|.+.++-+.+.+++.
T Consensus       804 qVkm~kRysvdk~lsh~Wlq~  824 (888)
T KOG4236|consen  804 QVKMRKRYSVDKSLSHPWLQD  824 (888)
T ss_pred             HHHHHHhcchHhhccchhhhc
Confidence            999999999877654455443

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.06  E-value=5e-10  Score=69.96  Aligned_cols=93  Identities=23%  Similarity=0.283  Sum_probs=63.7

Q ss_pred             cceecccccccCC-------CcccccchhhhHHHHHHHhCCCCCCcch----hHHhhhhcCCCCCcCCCCCCC-----ch
Q 041728            8 FMNFFEGLAYTIK-------ITEKYDVYSFGVLVLEVIKGKHPRDQMF----FLQFQLHLPIPLDEMLDPRLP-----PD   71 (108)
Q Consensus         8 ~~~~ape~~~~~~-------~~~~~di~s~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-----~~   71 (108)
                      ..|.|||.+....       .+.+.|+||+|+++++++....||....    +.+....+.........|.+.     .+
T Consensus       115 ~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~  194 (484)
T KOG1023|consen  115 LLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPP  194 (484)
T ss_pred             HhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcch
Confidence            3589999887531       3566899999999999999999987533    222333332222222223222     24


Q ss_pred             HHHHHHhhhcCCCCCCCCCHhhH-HHHHHH
Q 041728           72 PLFDVAFSCLNGNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        72 ~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l  100 (108)
                      ++..++..||..+|..||+++++ ..+..+
T Consensus       195 ~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~  224 (484)
T KOG1023|consen  195 ELLLLVARCWEEIPEKRPSIEQIRSKLLTI  224 (484)
T ss_pred             HHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence            68899999999999999999998 554443

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.00  E-value=4.3e-10  Score=72.13  Aligned_cols=86  Identities=15%  Similarity=0.053  Sum_probs=59.5

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCC--CCCcCCCCCCCchHHHHHHhhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPI--PLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      +.+||+.|+|||++....|+..+|+|+.|+++|+|+-|+.||....+.+....+.+  ...++....-...++.+++.++
T Consensus       830 slvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kL  909 (1034)
T KOG0608|consen  830 SLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKL  909 (1034)
T ss_pred             hhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999987765554332211  1122222222225677776643


Q ss_pred             cCCCCCCCC
Q 041728           81 LNGNPESRL   89 (108)
Q Consensus        81 ~~~~p~~Rp   89 (108)
                      . .+++.|.
T Consensus       910 c-~sad~RL  917 (1034)
T KOG0608|consen  910 C-CSADSRL  917 (1034)
T ss_pred             h-cChhhhh
Confidence            2 2345554

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.99  E-value=1.1e-09  Score=63.38  Aligned_cols=96  Identities=13%  Similarity=0.050  Sum_probs=64.8

Q ss_pred             ccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHH---hhhh-----cCCCCCc-------------
Q 041728            5 LLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ---FQLH-----LPIPLDE-------------   62 (108)
Q Consensus         5 ~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~-------------   62 (108)
                      +-|..|..||.+.+ ..|..+.|+|..||++-++.++.+.+++-...+   .+..     ....++.             
T Consensus       189 vvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~e  268 (376)
T KOG0669|consen  189 VVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELE  268 (376)
T ss_pred             eeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCC
Confidence            44889999999886 568899999999999999999888776432111   1110     0000100             


Q ss_pred             ------------CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           63 ------------MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        63 ------------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                                  ...|-...++..+++..++..||.+|+.+++++-++++
T Consensus       269 Pl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F  318 (376)
T KOG0669|consen  269 PLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFF  318 (376)
T ss_pred             CCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhh
Confidence                        00111112468899999999999999999988544443

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=98.98  E-value=6.3e-10  Score=69.21  Aligned_cols=87  Identities=15%  Similarity=0.153  Sum_probs=59.4

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCC--chHHHHHHh
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLP--PDPLFDVAF   78 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~   78 (108)
                      +.-+||..||+||.+.+..|+.++|||++|.+++|++. -...+........   +..+..+   |...  ...-+.|++
T Consensus       420 t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d---~r~g~ip---~~~~~d~p~e~~ll~  493 (516)
T KOG1033|consen  420 TQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTD---IRDGIIP---PEFLQDYPEEYTLLQ  493 (516)
T ss_pred             hhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhh---hhcCCCC---hHHhhcCcHHHHHHH
Confidence            45679999999999999999999999999999999986 3333332221111   1111111   0101  123558899


Q ss_pred             hhcCCCCCCCCCHhhH
Q 041728           79 SCLNGNPESRLIITLT   94 (108)
Q Consensus        79 ~c~~~~p~~Rp~~~~l   94 (108)
                      .++...|..||++-+.
T Consensus       494 ~lls~~p~~RP~~~~~  509 (516)
T KOG1033|consen  494 QLLSPSPEERPSAIEV  509 (516)
T ss_pred             HhcCCCcccCchHHHH
Confidence            9999999999965554

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=98.96  E-value=4.2e-11  Score=74.87  Aligned_cols=41  Identities=15%  Similarity=0.088  Sum_probs=37.1

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcc
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQM   47 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~   47 (108)
                      +..|.|||.+.+..|++..|+||+||.+|++.+|+.-|.+.
T Consensus       598 SRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~  638 (752)
T KOG0670|consen  598 SRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR  638 (752)
T ss_pred             HHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence            45699999999999999999999999999999999888754

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.96  E-value=2.6e-09  Score=67.61  Aligned_cols=95  Identities=13%  Similarity=0.093  Sum_probs=58.3

Q ss_pred             cccceecccccccCC--------------------Cc--ccccchhhhHHHHHHHhCCC-CCCcchhHHhhh--------
Q 041728            6 LEFMNFFEGLAYTIK--------------------IT--EKYDVYSFGVLVLEVIKGKH-PRDQMFFLQFQL--------   54 (108)
Q Consensus         6 ~~~~~~ape~~~~~~--------------------~~--~~~di~s~g~~~~~~~~~~~-~~~~~~~~~~~~--------   54 (108)
                      +++.|++||.+....                    +.  ...|+||+|+++++++.+.. |+..........        
T Consensus       372 ~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~  451 (507)
T PLN03224        372 LDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLN  451 (507)
T ss_pred             CCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHH
Confidence            478899999875321                    11  24699999999999998754 664322111100        


Q ss_pred             ---hcCCCCCcCCCCCCCchHHHHHHhhhcCCCC---CCCCCHhhHHHHHHH
Q 041728           55 ---HLPIPLDEMLDPRLPPDPLFDVAFSCLNGNP---ESRLIITLTDGLKRL  100 (108)
Q Consensus        55 ---~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p---~~Rp~~~~l~~l~~l  100 (108)
                         ...........-....+...+++.+++..++   .+|+|+++++.+.++
T Consensus       452 ~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f  503 (507)
T PLN03224        452 RWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFF  503 (507)
T ss_pred             HHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCc
Confidence               0011111111111123668999999998765   689999999766654

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=98.95  E-value=4.4e-10  Score=71.99  Aligned_cols=44  Identities=27%  Similarity=0.283  Sum_probs=40.5

Q ss_pred             cccccccceecccccc-cCCCcccccchhhhHHHHHHHhCCCCCC
Q 041728            2 TDILLEFMNFFEGLAY-TIKITEKYDVYSFGVLVLEVIKGKHPRD   45 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~-~~~~~~~~di~s~g~~~~~~~~~~~~~~   45 (108)
                      ++++||..|++||.+. ...|+..+|.||||+++|+..+|..||-
T Consensus       181 ~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~  225 (732)
T KOG4250|consen  181 TSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI  225 (732)
T ss_pred             eeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence            4689999999999998 4889999999999999999999999885

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.95  E-value=4e-10  Score=67.03  Aligned_cols=98  Identities=13%  Similarity=0.024  Sum_probs=67.3

Q ss_pred             ccccccceeccccccc-----CCCcccccchhhhHHHHHHHhCCCCCCcch--hH-----------Hh--hhhcCCCCCc
Q 041728            3 DILLEFMNFFEGLAYT-----IKITEKYDVYSFGVLVLEVIKGKHPRDQMF--FL-----------QF--QLHLPIPLDE   62 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~~~~--~~-----------~~--~~~~~~~~~~   62 (108)
                      +-+|+--|||||++.-     ..|+.++|.||+|+++|-|+.|.+||.+.=  ..           +.  ...+..+..+
T Consensus       245 tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYe  324 (463)
T KOG0607|consen  245 TPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYE  324 (463)
T ss_pred             CcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCc
Confidence            3467888999997752     458899999999999999999999997431  00           00  1122233333


Q ss_pred             CCCCCCC--chHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           63 MLDPRLP--PDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        63 ~~~~~~~--~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ..+..+.  ..+..+++..++..++.+|.++.+++.+.++
T Consensus       325 FPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~  364 (463)
T KOG0607|consen  325 FPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWV  364 (463)
T ss_pred             CChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccc
Confidence            3332211  2568899999999999999998887544443

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=98.94  E-value=9.9e-10  Score=65.00  Aligned_cols=99  Identities=15%  Similarity=0.094  Sum_probs=67.0

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHH-hhh----------------------hcC-
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ-FQL----------------------HLP-   57 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~-~~~----------------------~~~-   57 (108)
                      |..+.+..|.|||++.+-.+...+||||.||++-++..|..-|.+..... +..                      ... 
T Consensus       175 tpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~  254 (369)
T KOG0665|consen  175 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVEN  254 (369)
T ss_pred             CchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhc
Confidence            44567889999999998779999999999999999999877666443110 000                      000 


Q ss_pred             ----------CCCCcCCC------CCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           58 ----------IPLDEMLD------PRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        58 ----------~~~~~~~~------~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                                +..++...      +......+.+++.+++..+|++|-+.++++.+..+
T Consensus       255 ~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~  313 (369)
T KOG0665|consen  255 RPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYI  313 (369)
T ss_pred             ChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCee
Confidence                      00001100      01112347899999999999999999998665544

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=98.85  E-value=1.4e-09  Score=61.25  Aligned_cols=45  Identities=16%  Similarity=0.027  Sum_probs=39.0

Q ss_pred             cccccceeccccccc----CCCcccccchhhhHHHHHHHhCCCCCCcch
Q 041728            4 ILLEFMNFFEGLAYT----IKITEKYDVYSFGVLVLEVIKGKHPRDQMF   48 (108)
Q Consensus         4 ~~~~~~~~ape~~~~----~~~~~~~di~s~g~~~~~~~~~~~~~~~~~   48 (108)
                      ..|+-.|||||.+..    ..|+.++|+||+|+.+.|+.+++.||++..
T Consensus       208 daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~  256 (282)
T KOG0984|consen  208 DAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG  256 (282)
T ss_pred             hcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence            468889999998763    468999999999999999999999998664

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.84  E-value=1.1e-09  Score=70.48  Aligned_cols=99  Identities=16%  Similarity=0.091  Sum_probs=70.5

Q ss_pred             ccccccceecccccccCCCc-ccccchhhhHHHHHHHhCCCCCCcchhHHhh--h--hcCCCC----CcCCCCCCCchHH
Q 041728            3 DILLEFMNFFEGLAYTIKIT-EKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQ--L--HLPIPL----DEMLDPRLPPDPL   73 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~-~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~----~~~~~~~~~~~~~   73 (108)
                      .++|+-.|+|||++....|. ...|||+.|+++..|..|+.||.-....+..  .  ......    ...+-..+ +.+.
T Consensus       483 g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-p~~~  561 (601)
T KOG0590|consen  483 GIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLL-PRET  561 (601)
T ss_pred             CcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhc-hhhH
Confidence            57789999999999998888 5689999999999999998888643322111  0  000000    00001112 2568


Q ss_pred             HHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           74 FDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        74 ~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      +.++..+++.+|.+|-++++|...++++.
T Consensus       562 ~~~~~~~l~~~P~~R~ti~~i~~d~W~~~  590 (601)
T KOG0590|consen  562 RIIIYRMLQLDPTKRITIEQILNDEWIRS  590 (601)
T ss_pred             HHHHHHHccCChhheecHHHHhhChHhhh
Confidence            89999999999999999999977777764

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.79  E-value=1e-08  Score=57.25  Aligned_cols=59  Identities=24%  Similarity=0.235  Sum_probs=51.0

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+...|++||..... ..+...|+|++|++++++                                 ..+.+++..|+.
T Consensus       153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------~~~~~~l~~~l~  199 (215)
T cd00180         153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------PELKDLIRKMLQ  199 (215)
T ss_pred             ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------HHHHHHHHHHhh
Confidence            3466789999988766 777889999999999998                                 458899999999


Q ss_pred             CCCCCCCCHhhHH
Q 041728           83 GNPESRLIITLTD   95 (108)
Q Consensus        83 ~~p~~Rp~~~~l~   95 (108)
                      .+|+.||++.++.
T Consensus       200 ~~p~~R~~~~~l~  212 (215)
T cd00180         200 KDPEKRPSAKEIL  212 (215)
T ss_pred             CCcccCcCHHHHh
Confidence            9999999998873

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.78  E-value=6.6e-09  Score=69.60  Aligned_cols=86  Identities=19%  Similarity=0.097  Sum_probs=65.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh---cCCCCCcCCCCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH---LPIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      .++||+.|.|||++....|...+|+|++|+++|+.+-|.-||.+.-+-.....   ....+.+- +...+ .+.++++..
T Consensus       217 qvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~-dea~p-~Ea~dli~~  294 (1205)
T KOG0606|consen  217 QVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE-DEALP-PEAQDLIEQ  294 (1205)
T ss_pred             cccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc-CcCCC-HHHHHHHHH
Confidence            46899999999999988899999999999999999999999987743322221   11222222 22233 779999999


Q ss_pred             hcCCCCCCCCC
Q 041728           80 CLNGNPESRLI   90 (108)
Q Consensus        80 c~~~~p~~Rp~   90 (108)
                      +++.+|..|-.
T Consensus       295 LL~qnp~~Rlg  305 (1205)
T KOG0606|consen  295 LLRQNPLCRLG  305 (1205)
T ss_pred             HHHhChHhhcc
Confidence            99999999953

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=98.78  E-value=6.5e-09  Score=61.80  Aligned_cols=43  Identities=14%  Similarity=0.176  Sum_probs=36.4

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCc
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQ   46 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~   46 (108)
                      ++-|.+|.|||.+.+. -|+.+.|+|+.||++-|+++-.+-|.+
T Consensus       199 VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g  242 (438)
T KOG0666|consen  199 VVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG  242 (438)
T ss_pred             eEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence            5678899999999875 478899999999999999987666653

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.71  E-value=1.1e-08  Score=63.37  Aligned_cols=91  Identities=14%  Similarity=0.104  Sum_probs=53.6

Q ss_pred             cccccceecccccccC-----CCc-ccccchhhhHHHHHHHhCCCCCC--cch-----------------hHHhhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTI-----KIT-EKYDVYSFGVLVLEVIKGKHPRD--QMF-----------------FLQFQLHLPI   58 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-----~~~-~~~di~s~g~~~~~~~~~~~~~~--~~~-----------------~~~~~~~~~~   58 (108)
                      .+||..|||||++-+.     .-+ ...|+|++|.++||+.++-.-++  ...                 .++.......
T Consensus       378 qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK  457 (534)
T KOG3653|consen  378 QVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKK  457 (534)
T ss_pred             hhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhc
Confidence            5799999999988642     112 45899999999999987422111  000                 1111111111


Q ss_pred             CCCcCCCCCC---CchHHHHHHhhhcCCCCCCCCCHhhH
Q 041728           59 PLDEMLDPRL---PPDPLFDVAFSCLNGNPESRLIITLT   94 (108)
Q Consensus        59 ~~~~~~~~~~---~~~~~~~l~~~c~~~~p~~Rp~~~~l   94 (108)
                      ..+...+.-.   .-.-+.+.++.||.-|++.|.|+.=+
T Consensus       458 ~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv  496 (534)
T KOG3653|consen  458 QRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV  496 (534)
T ss_pred             cCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence            1111111000   00337788999999999999998765

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=98.62  E-value=2.6e-08  Score=60.72  Aligned_cols=43  Identities=16%  Similarity=0.142  Sum_probs=36.6

Q ss_pred             ccccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCC
Q 041728            3 DILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRD   45 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~   45 (108)
                      ...||++|.|||++... .-+.++|+||.|+++..++++..||.
T Consensus       236 nrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf  279 (418)
T KOG1167|consen  236 NRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFF  279 (418)
T ss_pred             ccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccc
Confidence            35799999999988753 34578999999999999999888875

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.60  E-value=3.4e-08  Score=62.90  Aligned_cols=79  Identities=23%  Similarity=0.206  Sum_probs=57.8

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      +||..|||||.++  .+...+|.|++|++.+++++|..||... ....+..     .....|..-.....+++..++..+
T Consensus       154 cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~-~~~~Il~-----~~~~~p~~l~~~a~~~~~~l~~r~  225 (612)
T KOG0603|consen  154 CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGD-TMKRILK-----AELEMPRELSAEARSLFRQLFKRN  225 (612)
T ss_pred             ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchH-HHHHHhh-----hccCCchhhhHHHHHHHHHHHhhC
Confidence            7899999999987  5667899999999999999999999872 1222111     111122222256788888888899


Q ss_pred             CCCCCCH
Q 041728           85 PESRLII   91 (108)
Q Consensus        85 p~~Rp~~   91 (108)
                      |.+|...
T Consensus       226 p~nrLg~  232 (612)
T KOG0603|consen  226 PENRLGA  232 (612)
T ss_pred             HHHHhcc
Confidence            9998765

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.51  E-value=8.5e-08  Score=56.43  Aligned_cols=47  Identities=15%  Similarity=0.084  Sum_probs=37.9

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhH
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL   50 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~   50 (108)
                      .+-|-+|.|||.+.+ ..|+...||||.||++-|++..+.-|+..++.
T Consensus       217 EVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Pi  264 (449)
T KOG0664|consen  217 EVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPI  264 (449)
T ss_pred             HHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChH
Confidence            345678999999987 56889999999999999998877777665543

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=98.49  E-value=3.8e-07  Score=52.50  Aligned_cols=95  Identities=15%  Similarity=0.070  Sum_probs=61.7

Q ss_pred             cccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCc-chh----HHh------------hh-------------
Q 041728            6 LEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQ-MFF----LQF------------QL-------------   54 (108)
Q Consensus         6 ~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~-~~~----~~~------------~~-------------   54 (108)
                      .+..|-.||.+.. ..|+.+-|+||+||.+.++...+.||.. .+.    +..            ..             
T Consensus       194 ASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i  273 (338)
T KOG0668|consen  194 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDI  273 (338)
T ss_pred             ehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhH
Confidence            3456778887775 6688999999999999999987777752 210    000            00             


Q ss_pred             ---hcCCCCCcCCC---CCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           55 ---HLPIPLDEMLD---PRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        55 ---~~~~~~~~~~~---~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                         +....+.+...   ..+..++..+++.+++..|..+|+|+.|...+...
T Consensus       274 ~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF  325 (338)
T KOG0668|consen  274 LGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYF  325 (338)
T ss_pred             hhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchH
Confidence               00111111111   12223668999999999999999999987544443

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.49  E-value=2e-07  Score=52.79  Aligned_cols=43  Identities=19%  Similarity=0.231  Sum_probs=37.1

Q ss_pred             cccccceeccccc-ccCCCcccccchhhhHHHHHHHhCCCCCCc
Q 041728            4 ILLEFMNFFEGLA-YTIKITEKYDVYSFGVLVLEVIKGKHPRDQ   46 (108)
Q Consensus         4 ~~~~~~~~ape~~-~~~~~~~~~di~s~g~~~~~~~~~~~~~~~   46 (108)
                      ..++..|++||.+ ....++.++|+|++|++++++++|+.||.+
T Consensus       159 ~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      159 VKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             eeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            4567789999988 556677799999999999999999999976

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.35  E-value=8.1e-07  Score=49.48  Aligned_cols=94  Identities=16%  Similarity=0.122  Sum_probs=59.5

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHh-CCCCCCcchh---HHhhhhc-----CCCCCcCC-------CC
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIK-GKHPRDQMFF---LQFQLHL-----PIPLDEML-------DP   66 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~---~~~~~~~-----~~~~~~~~-------~~   66 (108)
                      .+-|.+|..|.++.+. -|+.+.|+||.||++.|+.. |.+-|.+...   ...+...     +..++...       .|
T Consensus       161 evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp  240 (292)
T KOG0662|consen  161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYP  240 (292)
T ss_pred             eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccC
Confidence            3457789999988774 47788999999999999987 6665654331   1111110     11111111       01


Q ss_pred             CCCc------------hHHHHHHhhhcCCCCCCCCCHhhHHHH
Q 041728           67 RLPP------------DPLFDVAFSCLNGNPESRLIITLTDGL   97 (108)
Q Consensus        67 ~~~~------------~~~~~l~~~c~~~~p~~Rp~~~~l~~l   97 (108)
                      ..+.            ..-++++++++.-+|.+|-++++..++
T Consensus       241 ~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh  283 (292)
T KOG0662|consen  241 IYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH  283 (292)
T ss_pred             CccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence            1111            337789999999999999998876443

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.27  E-value=9.9e-07  Score=60.18  Aligned_cols=87  Identities=16%  Similarity=0.139  Sum_probs=55.9

Q ss_pred             cceecccccccC----------C-CcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHH
Q 041728            8 FMNFFEGLAYTI----------K-ITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFD   75 (108)
Q Consensus         8 ~~~~ape~~~~~----------~-~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (108)
                      ..|+|||.+...          . ...+=||+|.||++.|++. |+++|.-.......... ....+..=..+....+++
T Consensus       191 tCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~-~~~~e~~Le~Ied~~~Rn  269 (1431)
T KOG1240|consen  191 TCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGN-ADDPEQLLEKIEDVSLRN  269 (1431)
T ss_pred             eeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccC-ccCHHHHHHhCcCccHHH
Confidence            469999988641          1 4566799999999999987 77777532211110000 000011001122245899


Q ss_pred             HHhhhcCCCCCCCCCHhhHH
Q 041728           76 VAFSCLNGNPESRLIITLTD   95 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l~   95 (108)
                      ++..+++.||++|.++++.+
T Consensus       270 lil~Mi~rdPs~RlSAedyL  289 (1431)
T KOG1240|consen  270 LILSMIQRDPSKRLSAEDYL  289 (1431)
T ss_pred             HHHHHHccCchhccCHHHHH
Confidence            99999999999999999873

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.06  E-value=1.9e-06  Score=51.19  Aligned_cols=76  Identities=17%  Similarity=0.128  Sum_probs=47.8

Q ss_pred             ccceeccccccc--------CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHh
Q 041728            7 EFMNFFEGLAYT--------IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAF   78 (108)
Q Consensus         7 ~~~~~ape~~~~--------~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   78 (108)
                      +..|.+||....        ..++.+.|.|.+|+++|.+.-+..|+...........   ....+.  ..+ +.++.++.
T Consensus       205 ~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~---~f~~C~--~~P-e~v~~LI~  278 (288)
T PF14531_consen  205 PVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW---DFSRCR--DMP-EPVQFLIR  278 (288)
T ss_dssp             -TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG---GGTTSS------HHHHHHHH
T ss_pred             CcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc---cchhcC--CcC-HHHHHHHH
Confidence            455777775532        2467888999999999999999999875542222111   111111  333 77999999


Q ss_pred             hhcCCCCCCC
Q 041728           79 SCLNGNPESR   88 (108)
Q Consensus        79 ~c~~~~p~~R   88 (108)
                      ++++.+|.+|
T Consensus       279 ~lL~~~~~~R  288 (288)
T PF14531_consen  279 GLLQRNPEDR  288 (288)
T ss_dssp             HHT-SSGGGS
T ss_pred             HHccCCcccC
Confidence            9999999887

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.03  E-value=2.5e-05  Score=46.20  Aligned_cols=92  Identities=15%  Similarity=0.115  Sum_probs=63.1

Q ss_pred             ccccccceeccccccc---CCCcccccchhhhHHHHHHHhCCCCCCcchh----HHhhhhcCCCCCc-CCCCCCC-----
Q 041728            3 DILLEFMNFFEGLAYT---IKITEKYDVYSFGVLVLEVIKGKHPRDQMFF----LQFQLHLPIPLDE-MLDPRLP-----   69 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~-----   69 (108)
                      ...|+..|++||.+..   ..+....|+|++|+.+++++.+..|+.....    ............. .......     
T Consensus       167 ~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (384)
T COG0515         167 TSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPEL  246 (384)
T ss_pred             ccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccch
Confidence            4678999999999886   4677899999999999999999888765542    1222211111111 1111111     


Q ss_pred             -chHHHHHHhhhcCCCCCCCCCHhhH
Q 041728           70 -PDPLFDVAFSCLNGNPESRLIITLT   94 (108)
Q Consensus        70 -~~~~~~l~~~c~~~~p~~Rp~~~~l   94 (108)
                       .....+++..++..+|..|.+..+.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~r~~~~~~  272 (384)
T COG0515         247 ISKAASDLLKKLLAKDPKNRLSSSSD  272 (384)
T ss_pred             hhHHHHHHHHHHHhcCchhcCCHHHH
Confidence             1357899999999999999987765

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.99  E-value=1.8e-05  Score=53.98  Aligned_cols=90  Identities=17%  Similarity=0.044  Sum_probs=68.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcC-CCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEM-LDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~c~   81 (108)
                      ...||+.|++||...+......+|+|+.|+.+++.+.|..|+....+.+....+.++...- ..+.....+.++++...+
T Consensus       994 ~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll 1073 (1205)
T KOG0606|consen  994 AVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLL 1073 (1205)
T ss_pred             cccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhh
Confidence            4679999999999998888899999999999999999999998776655544333332222 122233356888889898


Q ss_pred             CCCCCCCCCHh
Q 041728           82 NGNPESRLIIT   92 (108)
Q Consensus        82 ~~~p~~Rp~~~   92 (108)
                      ..++.+|..+.
T Consensus      1074 ~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1074 TEEPTQRLGAK 1084 (1205)
T ss_pred             ccCchhccCcc
Confidence            99999997765

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=97.98  E-value=1.7e-05  Score=49.29  Aligned_cols=86  Identities=19%  Similarity=0.157  Sum_probs=57.5

Q ss_pred             ccccceeccccccc--CC---Cc-ccccchhhhHHHHHHHhCCCCCCcch--hHHhhhhcCCCCCcCCCCCCCchHHHHH
Q 041728            5 LLEFMNFFEGLAYT--IK---IT-EKYDVYSFGVLVLEVIKGKHPRDQMF--FLQFQLHLPIPLDEMLDPRLPPDPLFDV   76 (108)
Q Consensus         5 ~~~~~~~ape~~~~--~~---~~-~~~di~s~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l   76 (108)
                      -|.-..||||....  ++   .+ .++|.|+.|.+.||++...-||....  ..+...+. +...+.+...++ ...+++
T Consensus       412 GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq-e~qLPalp~~vp-p~~rql  489 (598)
T KOG4158|consen  412 GGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ-ESQLPALPSRVP-PVARQL  489 (598)
T ss_pred             CCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh-hhhCCCCcccCC-hHHHHH
Confidence            36677899998763  22   23 57999999999999998766775421  11111111 112233333444 668999


Q ss_pred             HhhhcCCCCCCCCCHh
Q 041728           77 AFSCLNGNPESRLIIT   92 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~~~   92 (108)
                      +..+++.||.+|++.+
T Consensus       490 V~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  490 VFDLLKRDPSKRVSPN  505 (598)
T ss_pred             HHHHhcCCccccCCcc
Confidence            9999999999999855

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=97.90  E-value=1.7e-06  Score=55.57  Aligned_cols=43  Identities=12%  Similarity=0.133  Sum_probs=36.6

Q ss_pred             ccccccceecccccccCCCc-ccccchhhhHHHHHHHhCCCCCC
Q 041728            3 DILLEFMNFFEGLAYTIKIT-EKYDVYSFGVLVLEVIKGKHPRD   45 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~-~~~di~s~g~~~~~~~~~~~~~~   45 (108)
                      .+.||+.|.|||++.+.+|. ...|||++|+++|.+....-||.
T Consensus       727 ~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  727 VFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             eeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            47899999999999988886 56899999999998887666654

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=97.48  E-value=2.8e-05  Score=46.10  Aligned_cols=84  Identities=14%  Similarity=0.190  Sum_probs=50.2

Q ss_pred             ceecccccc---cCC--CcccccchhhhHHHHHHHhCCCCCCcchhH-----HhhhhcCCCCCcCC--CCCCCchHHHHH
Q 041728            9 MNFFEGLAY---TIK--ITEKYDVYSFGVLVLEVIKGKHPRDQMFFL-----QFQLHLPIPLDEML--DPRLPPDPLFDV   76 (108)
Q Consensus         9 ~~~ape~~~---~~~--~~~~~di~s~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~l   76 (108)
                      .|-+||.+.   ..+  .....|+|.||++++..++|..||+.....     .+..+..+......  ..... +.+..+
T Consensus       185 ~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs-~~a~r~  263 (378)
T KOG1345|consen  185 NYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFS-EKALRL  263 (378)
T ss_pred             ccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccC-HHHHHH
Confidence            355666443   223  357789999999999999999999843311     22222222222211  11222 456677


Q ss_pred             HhhhcCCCCCCCCCHhh
Q 041728           77 AFSCLNGNPESRLIITL   93 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~~~~   93 (108)
                      .++-+..++.+|=...+
T Consensus       264 Fkk~lt~~~~drcki~~  280 (378)
T KOG1345|consen  264 FKKSLTPRFKDRCKIWT  280 (378)
T ss_pred             HHHhcCCcccccchhHH
Confidence            78888888888844333

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.42  E-value=8.1e-05  Score=48.75  Aligned_cols=90  Identities=18%  Similarity=0.049  Sum_probs=61.7

Q ss_pred             ccc-ccceecccccccCC-CcccccchhhhHHHHHHHhCCCCCCcchhHHhhh--hcCCC-CCcCC-CCCCCchHHHHHH
Q 041728            4 ILL-EFMNFFEGLAYTIK-ITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL--HLPIP-LDEML-DPRLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~-~~~~~ape~~~~~~-~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~-~~~~~~~~~~~l~   77 (108)
                      .+| ++.|+|||...+.. .....|+|+.|+++..+.+|..|+..........  ..... ..... -..+. ....++.
T Consensus       188 ~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l  266 (601)
T KOG0590|consen  188 RCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSIS-DQAHDLL  266 (601)
T ss_pred             ccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCC-hhhhhcc
Confidence            467 89999999988744 4577999999999999999999887554322211  11111 00111 11222 4577888


Q ss_pred             hhhcCCCCCCCCCHhhH
Q 041728           78 FSCLNGNPESRLIITLT   94 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l   94 (108)
                      .+++..++..|.+.+++
T Consensus       267 ~k~l~~~~~~r~s~~~~  283 (601)
T KOG0590|consen  267 HKILKENPSNRLSIEEL  283 (601)
T ss_pred             cccccCCchhccccccc
Confidence            88888999999998887

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.07  E-value=0.0036  Score=38.09  Aligned_cols=91  Identities=13%  Similarity=0.074  Sum_probs=62.9

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCC---CCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEML---DPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~c   80 (108)
                      +.||..|.++..-.+...+.+.|+||++-++.++..|..||.+..................   .....+.++..++..+
T Consensus       197 ~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (322)
T KOG1164|consen  197 FRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYI  276 (322)
T ss_pred             CCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHh
Confidence            5599999998877777788899999999999999999999876543211111111111111   2233446688888877


Q ss_pred             cCCCCCCCCCHhhH
Q 041728           81 LNGNPESRLIITLT   94 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l   94 (108)
                      -..+...+|....+
T Consensus       277 ~~~~~~~~Pdy~~~  290 (322)
T KOG1164|consen  277 DSLDYEDKPDYEKL  290 (322)
T ss_pred             hccCCcCCCCHHHH
Confidence            77889999998887

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=96.32  E-value=0.07  Score=34.46  Aligned_cols=100  Identities=15%  Similarity=0.099  Sum_probs=59.4

Q ss_pred             ccccceeccccccc-----CCCcccccchhhhHHHHHHHh-CCCCCCcchhH-------Hh-hh-----h-cCCCCCcCC
Q 041728            5 LLEFMNFFEGLAYT-----IKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFL-------QF-QL-----H-LPIPLDEML   64 (108)
Q Consensus         5 ~~~~~~~ape~~~~-----~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~-------~~-~~-----~-~~~~~~~~~   64 (108)
                      +|..-|+.||.-.-     .......|.+.+++++++++. |.+||.+....       +. +.     + .........
T Consensus       177 Vg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p  256 (637)
T COG4248         177 VGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKP  256 (637)
T ss_pred             cCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCC
Confidence            46677888986542     233567899999999999887 59999866421       10 00     0 000001111


Q ss_pred             CCCC-----CchHHHHHHhhhcCCC--CCCCCCHhhH-HHHHHHHHHH
Q 041728           65 DPRL-----PPDPLFDVAFSCLNGN--PESRLIITLT-DGLKRLASFL  104 (108)
Q Consensus        65 ~~~~-----~~~~~~~l~~~c~~~~--p~~Rp~~~~l-~~l~~l~~~~  104 (108)
                      .|..     .+.....+...|+...  +.-||+.+.- ..|..+...+
T Consensus       257 ~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L  304 (637)
T COG4248         257 PPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQL  304 (637)
T ss_pred             CCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhh
Confidence            1111     1255788888888653  5689998764 5555555544

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.21  E-value=0.0014  Score=43.43  Aligned_cols=87  Identities=21%  Similarity=0.140  Sum_probs=55.1

Q ss_pred             ccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhh--hhcCCCCCcCCC-CCCCchHHHHHHhhhcC
Q 041728            7 EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQ--LHLPIPLDEMLD-PRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         7 ~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~l~~~c~~   82 (108)
                      ...|.|||.+........+|++|+|++.|.+.. |+.-+.+.+.....  ............ ..++ .++.+-+.+.+.
T Consensus       172 ~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p-~el~~~l~k~l~  250 (700)
T KOG2137|consen  172 HLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLP-SELRESLKKLLN  250 (700)
T ss_pred             CcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCc-HHHHHHHHHHhc
Confidence            456999999987666788999999999988775 44433322111111  011111111111 2344 778999999999


Q ss_pred             CCCCCCCCHhhH
Q 041728           83 GNPESRLIITLT   94 (108)
Q Consensus        83 ~~p~~Rp~~~~l   94 (108)
                      .+...||++.++
T Consensus       251 ~~~~~rp~~~~l  262 (700)
T KOG2137|consen  251 GDSAVRPTLDLL  262 (700)
T ss_pred             CCcccCcchhhh
Confidence            999999976655

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.17  E-value=0.0027  Score=39.09  Aligned_cols=85  Identities=18%  Similarity=0.088  Sum_probs=47.6

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHhCCCC-CCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHP-RDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      +-++|-+|+.-........+|||+||....++..+..- --+.........+.+....     .....-+.++.+|++..
T Consensus       244 ~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~-----len~lqr~~i~kcl~~e  318 (458)
T KOG1266|consen  244 SLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIG-----LENGLQRGSITKCLEGE  318 (458)
T ss_pred             cCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheee-----ccCccccCcCcccccCC
Confidence            34566677654444556789999999888887664321 1111100000000000000     11122346678999999


Q ss_pred             CCCCCCHhhHH
Q 041728           85 PESRLIITLTD   95 (108)
Q Consensus        85 p~~Rp~~~~l~   95 (108)
                      |..||++.+++
T Consensus       319 P~~rp~ar~ll  329 (458)
T KOG1266|consen  319 PNGRPDARLLL  329 (458)
T ss_pred             CCCCcchhhhh
Confidence            99999999864

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=95.80  E-value=0.01  Score=38.56  Aligned_cols=95  Identities=18%  Similarity=0.086  Sum_probs=56.2

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      -|...|++||..+ +.+....|++++|.+..+...+......-+...|... .......-...-....+...+..++..+
T Consensus       289 ~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~-r~~~ip~e~~~~~s~~l~~~~~~~~d~~  366 (524)
T KOG0601|consen  289 EGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL-RQGYIPLEFCEGGSSSLRSVTSQMLDED  366 (524)
T ss_pred             CCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc-ccccCchhhhcCcchhhhhHHHHhcCcc
Confidence            3567799999875 6677889999999999888775443322211122111 1110000000111133555777888999


Q ss_pred             CCCCCCHhhHHHHHHHH
Q 041728           85 PESRLIITLTDGLKRLA  101 (108)
Q Consensus        85 p~~Rp~~~~l~~l~~l~  101 (108)
                      +..|+++..+..+..|.
T Consensus       367 ~~~~~~~q~~~~l~~i~  383 (524)
T KOG0601|consen  367 PRLRLTAQILTALNVIH  383 (524)
T ss_pred             hhhhhHHHHHhcccccc
Confidence            99999988775454443

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=91.07  E-value=0.6  Score=29.39  Aligned_cols=91  Identities=8%  Similarity=-0.069  Sum_probs=60.7

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHh---hhhcCCC----CCcCCCCCCCchHHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQF---QLHLPIP----LDEMLDPRLPPDPLFD   75 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~   75 (108)
                      +..||-.||+-..-.+..-+.+-|+=++|=++.+.+.|..||++......   +..+...    ..+.+...+| .++..
T Consensus       195 SLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P-~efa~  273 (449)
T KOG1165|consen  195 SLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLCEGFP-EEFAT  273 (449)
T ss_pred             ccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHHhcCH-HHHHH
Confidence            56789999987766666677788999999999999999999998753322   2211111    1111122233 56777


Q ss_pred             HHhhhcCCCCCCCCCHhhH
Q 041728           76 VAFSCLNGNPESRLIITLT   94 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l   94 (108)
                      .+...-..+-.+-|..+-+
T Consensus       274 Yl~yvR~L~F~E~PDYdyl  292 (449)
T KOG1165|consen  274 YLRYVRRLDFFETPDYDYL  292 (449)
T ss_pred             HHHHHHhcCcccCCCHHHH
Confidence            7776666777778877666

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=88.63  E-value=0.71  Score=27.83  Aligned_cols=97  Identities=13%  Similarity=0.006  Sum_probs=60.7

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---h----cCCCCCcCCCCCCCchHHHHH
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---H----LPIPLDEMLDPRLPPDPLFDV   76 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~l   76 (108)
                      ..||..|.+-.......-+..-|+=|+|-++.+.-.|..||++.......+   .    ......+.+..-.| .++...
T Consensus       181 ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P-~EF~my  259 (341)
T KOG1163|consen  181 LTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFP-AEFAMY  259 (341)
T ss_pred             cceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCc-HHHHHH
Confidence            456666654333222233456688899988877777999999876443222   1    11222333334444 779999


Q ss_pred             HhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           77 AFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      +..|-...-++.|...-+.++-++.
T Consensus       260 l~Y~R~L~F~E~Pdy~ylrqlFriL  284 (341)
T KOG1163|consen  260 LNYCRGLGFEEKPDYMYLRQLFRIL  284 (341)
T ss_pred             HHHHhhcCCCCCCcHHHHHHHHHHH
Confidence            9999888888888877665444443

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=83.05  E-value=0.62  Score=31.22  Aligned_cols=72  Identities=22%  Similarity=0.217  Sum_probs=38.5

Q ss_pred             ccccchhhhHHHHHHHhCCCCCCcchhH---HhhhhcCCCCCcCC-------CCCCCchHHHHHHhhhcCCCCCCCCCHh
Q 041728           23 EKYDVYSFGVLVLEVIKGKHPRDQMFFL---QFQLHLPIPLDEML-------DPRLPPDPLFDVAFSCLNGNPESRLIIT   92 (108)
Q Consensus        23 ~~~di~s~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~   92 (108)
                      .++|||+.|.++.++.-|..-+......   ..+...-.......       .....+.....+...|....|..||...
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~  189 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPM  189 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchh
Confidence            5899999999999887765444332211   11111000000000       0001113366778888888888888655


Q ss_pred             hH
Q 041728           93 LT   94 (108)
Q Consensus        93 ~l   94 (108)
                      +.
T Consensus       190 ~~  191 (725)
T KOG1093|consen  190 EL  191 (725)
T ss_pred             HH
Confidence            44

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	108
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	6e-11
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-10
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-10
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	7e-09
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	8e-08
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-07
3soc_A	322	Activin receptor type-2A; structural genomics cons	7e-07
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-06
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	6e-06
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	8e-06
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-05
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-05
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-04
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-04
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	8e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 56.4 bits (137), Expect = 6e-11
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 17/90 (18%)

Query: 16  AYTIKITEKYDVYSFGVLVLEVIKGKHPRD-------QMFFLQ---FQLHLPIPLDEMLD 65
             T K +EK DV+ +GV++LE+I G+   D           L      L     L+ ++D
Sbjct: 207 LSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVD 266

Query: 66  PRLPPDP-------LFDVAFSCLNGNPESR 88
             L  +        L  VA  C   +P  R
Sbjct: 267 VDLQGNYKDEEVEQLIQVALLCTQSSPMER 296

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 55.3 bits (134), Expect = 1e-10
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 15/88 (17%)

Query: 16  AYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQ--------LHLPIPLDEMLDPR 67
               ++TEK DVYSFGV++ EV+  +    Q    +           H    L++++DP 
Sbjct: 213 FIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPN 272

Query: 68  L----PPDPLF---DVAFSCLNGNPESR 88
           L     P+ L    D A  CL  + E R
Sbjct: 273 LADKIRPESLRKFGDTAVKCLALSSEDR 300

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 54.9 bits (133), Expect = 2e-10
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 13/82 (15%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHP----RDQMFFLQFQLHL---PIPLDEMLDPRL---P 69
           +IT K D+YSFGV++LE+I G       R+    L  +  +      +++ +D ++    
Sbjct: 210 EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDAD 269

Query: 70  PDPLF---DVAFSCLNGNPESR 88
              +     VA  CL+     R
Sbjct: 270 STSVEAMYSVASQCLHEKKNKR 291

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 50.4 bits (121), Expect = 7e-09
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 22  TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPD---PLFDVAF 78
            EK DV+SFG+++ E+I   +             L +     LD   PP+     F +  
Sbjct: 200 DEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNV--RGFLDRYCPPNCPPSFFPITV 257

Query: 79  SCLNGNPESR 88
            C + +PE R
Sbjct: 258 RCCDLDPEKR 267

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 47.3 bits (113), Expect = 8e-08
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 4/70 (5%)

Query: 22  TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLP---PDPLFDVAF 78
           TEK D YSF +++  ++ G+ P D+  + + +    I  +E L P +P   P  L +V  
Sbjct: 206 TEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI-REEGLRPTIPEDCPPRLRNVIE 264

Query: 79  SCLNGNPESR 88
            C +G+P+ R
Sbjct: 265 LCWSGDPKKR 274

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 45.0 bits (107), Expect = 5e-07
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 15/75 (20%)

Query: 22  TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQ--------LHLPIPLDEMLDPRLPPDPL 73
           +EK DV+S+G+++ EVI  + P D++    F+           P+  +      LP  P+
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKN------LPK-PI 233

Query: 74  FDVAFSCLNGNPESR 88
             +   C + +P  R
Sbjct: 234 ESLMTRCWSKDPSQR 248

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 44.7 bits (106), Expect = 7e-07
 Identities = 16/98 (16%), Positives = 34/98 (34%), Gaps = 21/98 (21%)

Query: 13  EGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQM---FFLQFQLHLPI--PLDEM---- 63
             + +      + D+Y+ G+++ E+       D     + L F+  +     L++M    
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVV 266

Query: 64  ----LDPRLPPD--------PLFDVAFSCLNGNPESRL 89
                 P L            L +    C + + E+RL
Sbjct: 267 VHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARL 304

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 14/74 (18%)

Query: 22  TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQF-------QLHLPIPLDEMLDPRLPPDPLF 74
           ++  DV+S+GVL+ E++ G+ P   +  L         +L LPIP          P+P  
Sbjct: 192 SKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTC-------PEPFA 244

Query: 75  DVAFSCLNGNPESR 88
            +   C N +P SR
Sbjct: 245 KLMEDCWNPDPHSR 258

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 41.9 bits (99), Expect = 6e-06
 Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 11/79 (13%)

Query: 17  YTIKITEKYDVYSFGVLVLEVIKGKHPRD------QMFFLQFQLHLPIPLDEMLDPRLPP 70
           Y  K  E  DVY+FG+ +LE+   ++P        Q++        P   D++  P    
Sbjct: 202 YEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP---- 257

Query: 71  DPLFDVAFSCLNGNPESRL 89
             + ++   C+  N + R 
Sbjct: 258 -EVKEIIEGCIRQNKDERY 275

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 41.9 bits (99), Expect = 8e-06
 Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 14/74 (18%)

Query: 22  TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQF-------QLHLPIPLDEMLDPRLPPDPLF 74
            EK DVYSFGV++ E+   + P   +   Q           L IP +      L P  + 
Sbjct: 217 NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRN------LNP-QVA 269

Query: 75  DVAFSCLNGNPESR 88
            +   C    P  R
Sbjct: 270 AIIEGCWTNEPWKR 283

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 40.3 bits (95), Expect = 2e-05
 Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 14/74 (18%)

Query: 22  TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQF-------QLHLPIPLDEMLDPRLPPDPLF 74
               D++SF VL+ E++  + P   +  ++         L   IP      P + P  + 
Sbjct: 189 RRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIP------PGISP-HVS 241

Query: 75  DVAFSCLNGNPESR 88
            +   C+N +P  R
Sbjct: 242 KLMKICMNEDPAKR 255

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 14/89 (15%)

Query: 7   EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVI------KGKHPRDQMFF-LQFQLHLPIP 59
           E +   +   Y+ +     DVY+FG+++ E++         + RDQ+   +      P  
Sbjct: 192 EVIRMQDSNPYSFQS----DVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL 247

Query: 60  LDEMLDPRLPPDPLFDVAFSCLNGNPESR 88
                     P  +  +   CL    + R
Sbjct: 248 SKV---RSNCPKRMKRLMAECLKKKRDER 273

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 38.5 bits (90), Expect = 1e-04
 Identities = 10/73 (13%), Positives = 23/73 (31%), Gaps = 12/73 (16%)

Query: 22  TEKYDVYSFGVLVLEVIKGKHPRDQM------FFLQFQLHLPIPLDEMLDPRLPPDPLFD 75
           ++  DV++ G +  E+   + P          + +   +   +    M         + D
Sbjct: 221 SKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGM------GKEISD 274

Query: 76  VAFSCLNGNPESR 88
           +   C     E R
Sbjct: 275 ILLFCWAFEQEER 287

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 36.3 bits (84), Expect = 8e-04
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 9/80 (11%)

Query: 13  EGLAYTIKITEKYDVYSFGVLVLEVI-KGKHPRDQMFFLQFQLHLPIPLDE---MLDPRL 68
           E LAY  K + K DV++FGVL+ E+   G  P   +   Q        L++   M  P  
Sbjct: 389 ESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL----LEKDYRMERPEG 443

Query: 69  PPDPLFDVAFSCLNGNPESR 88
            P+ ++++  +C   NP  R
Sbjct: 444 CPEKVYELMRACWQWNPSDR 463

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	108
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.94
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.94
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.93
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.93
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.93
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.92
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.92
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.91
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.91
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.9
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.9
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.89
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.89
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.87
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.85
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.84
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.83
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.83
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.83
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.82
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.82
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.82
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.82
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.81
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.81
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.81
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.81
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.81
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.8
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.8
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.8
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.8
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.8
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.8
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.8
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.8
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.8
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.8
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.8
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.8
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.8
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.8
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.8
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.79
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.79
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.79
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.79
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.79
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.79
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.79
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.79
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.79
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.79
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.79
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.79
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.79
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.79
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.79
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.79
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.79
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.78
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.78
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.78
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.78
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.78
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.78
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.78
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.78
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.78
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.78
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.78
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.78
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.78
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.78
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.78
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.78
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.78
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.78
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.78
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.78
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.78
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.78
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.77
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.77
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.77
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.77
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.77
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.77
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.77
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.77
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.77
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.77
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.77
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.77
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.77
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.77
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.76
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.76
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.76
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.76
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.76
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.76
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.76
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.76
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.76
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.76
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.76
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.76
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.76
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.76
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.76
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.76
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.76
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.76
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.76
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.76
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.76
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.75
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.75
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.75
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.75
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.75
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.75
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.75
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.75
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.75
3bhy_A	283	Death-associated protein kinase 3; death associate	99.75
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.75
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.75
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.75
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.75
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.75
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.75
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.75
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.75
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.74
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.74
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.74
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.74
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.74
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.74
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.74
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.74
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.74
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.74
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.74
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.74
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.74
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.74
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.74
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.74
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.74
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.73
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.73
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.73
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.73
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.73
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.73
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.73
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.73
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.73
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.73
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.73
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.73
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.73
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.73
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.73
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.73
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.73
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.73
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.73
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.72
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.72
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.72
3niz_A	311	Rhodanese family protein; structural genomics, str	99.72
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.72
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.72
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.72
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.72
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.72
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.72
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.72
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.72
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.72
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.72
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.72
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.72
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.72
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.72
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.72
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.72
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.72
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.72
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.71
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.71
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.71
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.71
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.71
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.71
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.71
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.71
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.71
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.71
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.71
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.71
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.71
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.71
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.71
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.71
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.7
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.7
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.7
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.7
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.7
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.7
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.69
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.69
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.69
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.69
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.69
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.69
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.69
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.69
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.69
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.69
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.69
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.69
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.69
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.68
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.68
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.68
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.68
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.68
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.68
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.67
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.66
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.66
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.66
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.66
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.65
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.64
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.64
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.64
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.63
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.59
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.57
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.49
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.45
3uqc_A	286	Probable conserved transmembrane protein; structur	99.42
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.88
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	96.29
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	95.16

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.94  E-value=5.9e-27  Score=137.79  Aligned_cols=96  Identities=19%  Similarity=0.171  Sum_probs=76.9

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..+||+.|||||.+....|+.++||||||+++||+++ |..||.+....+....+..+..... |...+..+.+++..||
T Consensus       206 ~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~-p~~~~~~~~~li~~C~  284 (308)
T 4gt4_A          206 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC-PDDCPAWVYALMIECW  284 (308)
T ss_dssp             SSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHHHT
T ss_pred             ccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-cccchHHHHHHHHHHc
Confidence            4679999999999999999999999999999999998 8999988776555554333322222 3334478999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHH
Q 041728           82 NGNPESRLIITLT-DGLKR   99 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~   99 (108)
                      +.||.+||+|++| ..|+.
T Consensus       285 ~~dP~~RPs~~ei~~~L~a  303 (308)
T 4gt4_A          285 NEFPSRRPRFKDIHSRLRA  303 (308)
T ss_dssp             CSSGGGSCCHHHHHHHHHT
T ss_pred             CCChhHCcCHHHHHHHHHh
Confidence            9999999999999 55543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.94  E-value=1.1e-26  Score=137.66  Aligned_cols=99  Identities=25%  Similarity=0.326  Sum_probs=79.2

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ...||+.|||||.+....|+.++||||||+++||+++ |+.||.+....+....+.... +...|...+.++.+++..||
T Consensus       219 ~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~-~~~~p~~~~~~~~~li~~cl  297 (329)
T 4aoj_A          219 RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR-ELERPRACPPEVYAIMRGCW  297 (329)
T ss_dssp             -CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHC
T ss_pred             cccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-CCCCcccccHHHHHHHHHHc
Confidence            4679999999999999999999999999999999998 899998876655544332221 22233334488999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      +.||++||++++| ..|+.+..
T Consensus       298 ~~dP~~RPs~~ei~~~L~~l~~  319 (329)
T 4aoj_A          298 QREPQQRHSIKDVHARLQALAQ  319 (329)
T ss_dssp             CSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CcChhHCcCHHHHHHHHHHHhh
Confidence            9999999999999 77777654

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.93  E-value=1.1e-26  Score=136.17  Aligned_cols=98  Identities=23%  Similarity=0.288  Sum_probs=78.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..||+.|||||.+....|+.++||||||+++||+++ |+.||.+....+....+..+.... .|...+.++.+++..||+
T Consensus       190 ~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~-~p~~~~~~~~~li~~cl~  268 (299)
T 4asz_A          190 TMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQ-RPRTCPQEVYELMLGCWQ  268 (299)
T ss_dssp             EEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCC-CCTTCCHHHHHHHHHHTC
T ss_pred             eecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCC-CCccchHHHHHHHHHHcC
Confidence            468999999999999999999999999999999998 899998876655544333322222 233344789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      .||++||++++| ..|+.+..
T Consensus       269 ~dP~~RPs~~~i~~~L~~~~~  289 (299)
T 4asz_A          269 REPHMRKNIKGIHTLLQNLAK  289 (299)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHH
T ss_pred             CChhHCcCHHHHHHHHHHHHh
Confidence            999999999999 66766654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.93  E-value=8e-27  Score=139.32  Aligned_cols=99  Identities=22%  Similarity=0.322  Sum_probs=76.5

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhh-hcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQL-HLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ..+||+.|||||.+.+..|+.++||||||+++||+++ |..||.+........ ....+ .+...|...+.++.+++..|
T Consensus       246 ~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g-~~~~~p~~~~~~~~~li~~c  324 (353)
T 4ase_A          246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMRAPDYTTPEMYQTMLDC  324 (353)
T ss_dssp             TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHT-CCCCCCTTCCHHHHHHHHHH
T ss_pred             cccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcC-CCCCCCccCCHHHHHHHHHH
Confidence            4578999999999999999999999999999999998 899998765332222 11111 22223334457899999999


Q ss_pred             cCCCCCCCCCHhhH-HHHHHHHH
Q 041728           81 LNGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      |+.||.+||++++| ..|+.+.+
T Consensus       325 ~~~dP~~RPt~~eil~~L~~llq  347 (353)
T 4ase_A          325 WHGEPSQRPTFSELVEHLGNLLQ  347 (353)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCcChhHCcCHHHHHHHHHHHHH
Confidence            99999999999999 66666654

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.93  E-value=4.4e-26  Score=133.92  Aligned_cols=101  Identities=15%  Similarity=0.190  Sum_probs=75.2

Q ss_pred             ccccccceeccccccc---CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh-hcCCCC----CcCCCCCCCchHHH
Q 041728            3 DILLEFMNFFEGLAYT---IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL-HLPIPL----DEMLDPRLPPDPLF   74 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~   74 (108)
                      ..+||+.|||||.+..   ..|+.++||||||+++||+++|+.||.+.+...... ......    .....+.++ ..+.
T Consensus       193 ~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~l~  271 (307)
T 3omv_A          193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCP-KAMK  271 (307)
T ss_dssp             -CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSC-HHHH
T ss_pred             ccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccch-HHHH
Confidence            4689999999999863   468999999999999999999999998765333222 111111    111222333 7799


Q ss_pred             HHHhhhcCCCCCCCCCHhhH-HHHHHHHHHH
Q 041728           75 DVAFSCLNGNPESRLIITLT-DGLKRLASFL  104 (108)
Q Consensus        75 ~l~~~c~~~~p~~Rp~~~~l-~~l~~l~~~~  104 (108)
                      +++..||+.||++||++++| ..++.|.+.+
T Consensus       272 ~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l  302 (307)
T 3omv_A          272 RLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             HHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence            99999999999999999999 7777776554

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.92  E-value=3.6e-26  Score=136.13  Aligned_cols=99  Identities=12%  Similarity=0.057  Sum_probs=79.6

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      +++||+.|||||++.+..|+.++||||+||++|++++|..||.+.+.......+...........++ .++.+|+.+||+
T Consensus       184 ~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s-~~~~~li~~~L~  262 (350)
T 4b9d_A          184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYS-YDLRSLVSQLFK  262 (350)
T ss_dssp             HHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSC-HHHHHHHHHHTC
T ss_pred             ccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCC-HHHHHHHHHHcc
Confidence            4679999999999998899999999999999999999999998876655544332222222233334 779999999999


Q ss_pred             CCCCCCCCHhhHHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      .||.+||++++++.+.++..
T Consensus       263 ~dP~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          263 RNPRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             SSGGGSCCHHHHHTSHHHHT
T ss_pred             CChhHCcCHHHHhcCHHhhc
Confidence            99999999999977777654

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.92  E-value=6.6e-26  Score=132.31  Aligned_cols=97  Identities=14%  Similarity=0.113  Sum_probs=73.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHh-hhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQF-QLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      +.+||+.|||||.+. ..|+.++||||+|+++|++++|..||.+...... .........+...+...+.++.+++.+||
T Consensus       189 ~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L  267 (290)
T 3fpq_A          189 AVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCI  267 (290)
T ss_dssp             ESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHS
T ss_pred             CcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHc
Confidence            578999999999886 5699999999999999999999999976543322 22222222222222233367999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ..||.+|||+++++.+.++
T Consensus       268 ~~dP~~R~s~~e~l~Hp~~  286 (290)
T 3fpq_A          268 RQNKDERYSIKDLLNHAFF  286 (290)
T ss_dssp             CSSGGGSCCHHHHHTSGGG
T ss_pred             cCChhHCcCHHHHhcCccc
Confidence            9999999999999766554

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.91  E-value=1.7e-25  Score=133.04  Aligned_cols=101  Identities=16%  Similarity=0.103  Sum_probs=78.5

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCC-CcCCCCCCCchHHHHHHhhh
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPL-DEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ++++||+.|||||++....|+.++||||+||++|++++|..||.+.+.......+.... .........+.++.+|+.+|
T Consensus       228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~  307 (346)
T 4fih_A          228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL  307 (346)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHH
T ss_pred             cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHH
Confidence            45789999999999988899999999999999999999999998876555444322221 11111112237799999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      |+.||.+||+++|++.+.++..
T Consensus       308 L~~dP~~R~ta~e~l~Hp~~~~  329 (346)
T 4fih_A          308 LVRDPAQRATAAELLKHPFLAK  329 (346)
T ss_dssp             SCSSTTTSCCHHHHTTCGGGGG
T ss_pred             cCCChhHCcCHHHHhcCHhhcC
Confidence            9999999999999977766643

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.91  E-value=1.3e-24  Score=128.89  Aligned_cols=98  Identities=15%  Similarity=0.101  Sum_probs=74.6

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCC--CcCCCCCCCchHHHHHHhhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPL--DEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~c   80 (108)
                      .++||+.|||||++.+..|+.++||||+||++|++++|..||.+.+.......+....  .....+.++ ..+.+++.+|
T Consensus       215 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s-~~~~~li~~~  293 (336)
T 4g3f_A          215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCA-PLTAQAIQEG  293 (336)
T ss_dssp             CCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSC-HHHHHHHHHH
T ss_pred             ccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCC-HHHHHHHHHH
Confidence            3679999999999998899999999999999999999999998655333222211111  112233444 7799999999


Q ss_pred             cCCCCCCCCCHhhH-HHHHHHH
Q 041728           81 LNGNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      |+.||.+||++.|| ..+....
T Consensus       294 L~~dP~~R~sa~el~~~l~~~l  315 (336)
T 4g3f_A          294 LRKEPVHRASAMELRRKVGKAL  315 (336)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccCCHhHCcCHHHHHHHHHHHH
Confidence            99999999999999 5454443

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.90  E-value=8e-25  Score=132.98  Aligned_cols=101  Identities=16%  Similarity=0.103  Sum_probs=79.1

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCC-CcCCCCCCCchHHHHHHhhh
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPL-DEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ++++||+.|||||++....|+.++||||+||++|+|++|..||.+.+.......+.... .........+.++.+|+.+|
T Consensus       305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~  384 (423)
T 4fie_A          305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL  384 (423)
T ss_dssp             CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHH
T ss_pred             cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHH
Confidence            35789999999999998899999999999999999999999998876655444322221 12222222337799999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      |..||.+|+++.|++.+.++..
T Consensus       385 L~~dP~~R~ta~ell~Hp~~~~  406 (423)
T 4fie_A          385 LVRDPAQRATAAELLKHPFLAK  406 (423)
T ss_dssp             SCSSTTTSCCHHHHTTCGGGGG
T ss_pred             cCCChhHCcCHHHHhcCHHhcC
Confidence            9999999999999977666643

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.90  E-value=3.5e-24  Score=124.22  Aligned_cols=99  Identities=13%  Similarity=0.000  Sum_probs=72.7

Q ss_pred             cccccccceecccccccCCC-cccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            2 TDILLEFMNFFEGLAYTIKI-TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~-~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ++.+||+.|||||++.+..+ +.++||||+|+++|++++|..||.+.+.......+......  .+...+.++.+++.+|
T Consensus       169 ~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~~  246 (275)
T 3hyh_A          169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT--LPKFLSPGAAGLIKRM  246 (275)
T ss_dssp             ------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTSCHHHHHHHHHH
T ss_pred             CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHH
Confidence            35789999999999987776 47899999999999999999999876544433322222111  1223347899999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      |+.||++|||++|++++.++..
T Consensus       247 L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          247 LIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             SCSSGGGSCCHHHHHHCHHHHT
T ss_pred             ccCChhHCcCHHHHHcCccccc
Confidence            9999999999999988888764

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.89  E-value=2.1e-24  Score=126.88  Aligned_cols=97  Identities=12%  Similarity=0.026  Sum_probs=75.8

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      +++||+.|||||++.+..|+.++||||+||++|+|++|..||.+.+.......+.......  |...+.++.+|+.+||+
T Consensus       193 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~--p~~~s~~~~dli~~lL~  270 (311)
T 4aw0_A          193 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDF--PEKFFPKARDLVEKLLV  270 (311)
T ss_dssp             CCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC--CTTCCHHHHHHHHHHSC
T ss_pred             CcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC--CcccCHHHHHHHHHHcc
Confidence            5789999999999998899999999999999999999999998776554443322221221  22234779999999999


Q ss_pred             CCCCCCCCHhhHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .||.+|++++|+..+..|.
T Consensus       271 ~dp~~R~t~~e~~~~~~i~  289 (311)
T 4aw0_A          271 LDATKRLGCEEMEGYGPLK  289 (311)
T ss_dssp             SSGGGSTTSGGGTCHHHHH
T ss_pred             CCHhHCcChHHHcCCHHHH
Confidence            9999999999974444443

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.89  E-value=4.4e-24  Score=125.31  Aligned_cols=97  Identities=15%  Similarity=0.066  Sum_probs=75.4

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ++.+||+.|||||.+....|+.++||||+|+++|++++|..||.+.+.......+......  .|...+.++.+++.+||
T Consensus       184 ~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~~L  261 (304)
T 3ubd_A          184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG--MPQFLSPEAQSLLRMLF  261 (304)
T ss_dssp             CSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCTTSCHHHHHHHHHHT
T ss_pred             cccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCC--CCCcCCHHHHHHHHHHc
Confidence            3578999999999999889999999999999999999999999887655544432222121  22333478999999999


Q ss_pred             CCCCCCCCCH-----hhHHHHHHH
Q 041728           82 NGNPESRLII-----TLTDGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~~-----~~l~~l~~l  100 (108)
                      +.||.+||++     +|++.+.++
T Consensus       262 ~~dP~~R~ta~~~~~~eil~Hp~f  285 (304)
T 3ubd_A          262 KRNPANRLGAGPDGVEEIKRHSFF  285 (304)
T ss_dssp             CSSGGGSTTCSTTTHHHHHTSGGG
T ss_pred             ccCHHHCCCCCcCCHHHHHcCccc
Confidence            9999999985     566555444

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.87  E-value=9.3e-23  Score=119.85  Aligned_cols=97  Identities=13%  Similarity=0.141  Sum_probs=64.6

Q ss_pred             ccccccceecccccccC------CCcccccchhhhHHHHHHHhCCCCCCcchhH--------------H-hhhhcCCCCC
Q 041728            3 DILLEFMNFFEGLAYTI------KITEKYDVYSFGVLVLEVIKGKHPRDQMFFL--------------Q-FQLHLPIPLD   61 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~------~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~--------------~-~~~~~~~~~~   61 (108)
                      ..+||+.|||||.+.+.      .++.++||||||+++||+++|..|+......              . ........  
T Consensus       171 ~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--  248 (303)
T 3hmm_A          171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ--  248 (303)
T ss_dssp             ---CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS--
T ss_pred             cccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcc--
Confidence            35799999999998643      3677899999999999999987665322110              0 00011111  


Q ss_pred             cCCCCCCCc--------hHHHHHHhhhcCCCCCCCCCHhhH-HHHHHHHH
Q 041728           62 EMLDPRLPP--------DPLFDVAFSCLNGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        62 ~~~~~~~~~--------~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                       ...|.++.        ..+.+++..||+.||++|||+.+| ..|+.|..
T Consensus       249 -~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~  297 (303)
T 3hmm_A          249 -KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             -CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence             11122221        357899999999999999999999 66766653

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.85  E-value=3.3e-22  Score=125.71  Aligned_cols=97  Identities=15%  Similarity=-0.030  Sum_probs=76.8

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcC---CCCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEM---LDPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~   79 (108)
                      ..+||+.|||||.+.+..|+.++||||+||++|+|++|..||.+.+.......+.......   ..+.++ .++.+|+.+
T Consensus       315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~dli~~  393 (573)
T 3uto_A          315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGIS-EDGKDFIRK  393 (573)
T ss_dssp             EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSC-HHHHHHHHT
T ss_pred             eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCC-HHHHHHHHH
Confidence            4679999999999998899999999999999999999999998776655544332221111   122333 779999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ||+.||.+||++.|++++.++
T Consensus       394 ~L~~dp~~R~t~~e~l~Hpw~  414 (573)
T 3uto_A          394 LLLADPNTRMTIHQALEHPWL  414 (573)
T ss_dssp             TSCSSGGGSCCHHHHHHSTTT
T ss_pred             HccCChhHCcCHHHHhcCcCc
Confidence            999999999999999766554

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.84  E-value=6.3e-22  Score=119.90  Aligned_cols=99  Identities=14%  Similarity=0.115  Sum_probs=72.2

Q ss_pred             cccccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CCCCC---------------
Q 041728            2 TDILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PIPLD---------------   61 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---------------   61 (108)
                      ++.+||+.|||||++.+. .++.++||||+||++|++++|..||.+.+.......+    .....               
T Consensus       220 ~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~  299 (398)
T 4b99_A          220 TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYI  299 (398)
T ss_dssp             CSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHH
T ss_pred             ccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhh
Confidence            357899999999998764 4688999999999999999999999876533222110    00000               


Q ss_pred             ----c-------CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           62 ----E-------MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        62 ----~-------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                          .       ...+.+. .++.+|+.+||..||.+|+|+.|++++.++.
T Consensus       300 ~~~~~~~~~~~~~~~~~~s-~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~  349 (398)
T 4b99_A          300 QSLPPRQPVPWETVYPGAD-RQALSLLGRMLRFEPSARISAAAALRHPFLA  349 (398)
T ss_dssp             HSSCCCCCCCHHHHSTTCC-HHHHHHHHHHSCSSTTTSCCHHHHTTSGGGT
T ss_pred             hcCCCcCCCCHHHhCCCCC-HHHHHHHHHHCcCChhHCcCHHHHhcCHhhC
Confidence                0       0011222 6689999999999999999999997776664

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.83  E-value=8.7e-21  Score=114.04  Aligned_cols=102  Identities=20%  Similarity=0.222  Sum_probs=77.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+|+.|+|||.+....++.++|+||+|+++|++++ |..||.+.................. +...+..+.+++..||.
T Consensus       265 ~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~  343 (370)
T 2psq_A          265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK-PANCTNELYMMMRDCWH  343 (370)
T ss_dssp             TTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCC-CTTSCHHHHHHHHHHTC
T ss_pred             CCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHHHcC
Confidence            456788999999988889999999999999999998 9999986654333332222211122 22234789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHHHHhc
Q 041728           83 GNPESRLIITLT-DGLKRLASFLLK  106 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~~~~~  106 (108)
                      .+|.+||++.++ ..|+.+.....+
T Consensus       344 ~dP~~Rpt~~ell~~L~~il~~~~~  368 (370)
T 2psq_A          344 AVPSQRPTFKQLVEDLDRILTLTTN  368 (370)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred             CChhhCcCHHHHHHHHHHHHHHhcc
Confidence            999999999999 888888776554

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.83  E-value=8.9e-21  Score=111.61  Aligned_cols=100  Identities=20%  Similarity=0.167  Sum_probs=73.6

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||.....................+...+..+.+++..||.
T Consensus       198 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  277 (309)
T 3p86_A          198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWT  277 (309)
T ss_dssp             ----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTC
T ss_pred             cCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcc
Confidence            35689999999999888889999999999999999999999987665444332211111222222334779999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      .+|.+||++.++ ..|+.+..
T Consensus       278 ~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          278 NEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHC
T ss_pred             CChhhCcCHHHHHHHHHHHHH
Confidence            999999999999 65666543

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.83  E-value=2.8e-22  Score=117.64  Aligned_cols=94  Identities=11%  Similarity=-0.004  Sum_probs=63.6

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch-hHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF-FLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      +.+||+.|||||++.+..|+.++||||+||++|++++   ||.... .............+...+... ....+++..||
T Consensus       189 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~li~~~L  264 (299)
T 4g31_A          189 GQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPLFTQKY-PCEYVMVQDML  264 (299)
T ss_dssp             ---CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTCCCHHHHHHC-HHHHHHHHHHT
T ss_pred             CcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcCCCCCCCcccC-HHHHHHHHHHc
Confidence            4679999999999998899999999999999999985   565432 222222111111111001111 44678999999


Q ss_pred             CCCCCCCCCHhhHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l  100 (108)
                      +.||.+||++.+++++.++
T Consensus       265 ~~dP~~Rps~~eil~h~~~  283 (299)
T 4g31_A          265 SPSPMERPEAINIIENAVF  283 (299)
T ss_dssp             CSSGGGSCCHHHHHTSGGG
T ss_pred             CCChhHCcCHHHHhcCHhh
Confidence            9999999999998654444

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.82  E-value=7.7e-21  Score=114.01  Aligned_cols=98  Identities=18%  Similarity=0.064  Sum_probs=67.9

Q ss_pred             ccccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcch-hHHhhh--------------------------
Q 041728            3 DILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMF-FLQFQL--------------------------   54 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~-~~~~~~--------------------------   54 (108)
                      +.+||+.|+|||++.+. .|+.++|+||+||++|++++|..||.... ......                          
T Consensus       205 ~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~  284 (361)
T 4f9c_A          205 PRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSK  284 (361)
T ss_dssp             -CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESS
T ss_pred             ccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccc
Confidence            35799999999998765 47889999999999999999999985321 000000                          


Q ss_pred             ------------hcC---CCCCc------------CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           55 ------------HLP---IPLDE------------MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        55 ------------~~~---~~~~~------------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                                  ...   .....            .....+ ++++.+|+.+|++.||.+|+|++|++.+.++.
T Consensus       285 ~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~i-s~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~  357 (361)
T 4f9c_A          285 EVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEV-PDEAYDLLDKLLDLNPASRITAEEALLHPFFK  357 (361)
T ss_dssp             CCCCCCHHHHHHHHC----------------------CTTC-CHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGT
T ss_pred             cCcchhhhHHHHhhccccccccccccccccccccccccccC-CHHHHHHHHHHCcCChhHCcCHHHHhcCcccC
Confidence                        000   00000            000112 26789999999999999999999997776654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.82  E-value=1.4e-20  Score=113.30  Aligned_cols=96  Identities=20%  Similarity=0.268  Sum_probs=74.6

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      +++.|+|||.+....++.++|+||+|+++|++++ |..||............... .....+...+..+.+++..||..|
T Consensus       277 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~d  355 (377)
T 3cbl_A          277 VPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG-GRLPCPELCPDAVFRLMEQCWAYE  355 (377)
T ss_dssp             EEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCC
Confidence            5678999999988889999999999999999998 99999876544433322222 122223334478999999999999


Q ss_pred             CCCCCCHhhH-HHHHHHHH
Q 041728           85 PESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l~~  102 (108)
                      |.+||+++++ ..|+.+..
T Consensus       356 P~~Rps~~~i~~~L~~i~~  374 (377)
T 3cbl_A          356 PGQRPSFSTIYQELQSIRK  374 (377)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             chhCcCHHHHHHHHHHHHh
Confidence            9999999999 76777654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.82  E-value=2.4e-20  Score=107.46  Aligned_cols=98  Identities=13%  Similarity=0.145  Sum_probs=71.6

Q ss_pred             ccccccceecccccccCCCc---ccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKIT---EKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~---~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ...||+.|+|||.+....+.   .++|+||+|+++|++++|..||.....................+...+..+.+++..
T Consensus       167 ~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  246 (271)
T 3kmu_A          167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKI  246 (271)
T ss_dssp             TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHH
T ss_pred             CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Confidence            35689999999998865444   379999999999999999999987654443332111111112222234789999999


Q ss_pred             hcCCCCCCCCCHhhH-HHHHHH
Q 041728           80 CLNGNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l-~~l~~l  100 (108)
                      ||..||.+||+++++ ..|+.+
T Consensus       247 ~l~~~p~~Rps~~~il~~L~~l  268 (271)
T 3kmu_A          247 CMNEDPAKRPKFDMIVPILEKM  268 (271)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HcCCChhhCcCHHHHHHHHHHh
Confidence            999999999999999 656554

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.82  E-value=3.6e-20  Score=111.26  Aligned_cols=98  Identities=19%  Similarity=0.245  Sum_probs=75.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..||+.|+|||.+....++.++||||+|+++|++++ |..||.................... +...+..+.+++..||+
T Consensus       246 ~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~~~l~  324 (367)
T 3l9p_A          246 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQ  324 (367)
T ss_dssp             GGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTC
T ss_pred             cCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-CccCCHHHHHHHHHHcC
Confidence            457889999999988889999999999999999998 9999987665444443322222222 22234779999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      .+|.+||++.+| ..+..+..
T Consensus       325 ~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          325 HQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCHhHCcCHHHHHHHHHHHhh
Confidence            999999999999 66666543

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.81  E-value=2.3e-20  Score=114.63  Aligned_cols=99  Identities=20%  Similarity=0.265  Sum_probs=76.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+++.|+|||.+....++.++|+||+|+++|++++ |..||................ ....+...+..+.+++..||.
T Consensus       346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~-~~~~p~~~~~~l~~li~~cl~  424 (450)
T 1k9a_A          346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY-KMDAPDGCPPAVYDVMKNCWH  424 (450)
T ss_dssp             -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCCcCCHHHHHHHHHHcC
Confidence            356788999999988899999999999999999998 999998765443333222221 222233344789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLASF  103 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~~  103 (108)
                      .||.+||++.++ ..|+.+...
T Consensus       425 ~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          425 LDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CChhHCcCHHHHHHHHHHHHHh
Confidence            999999999999 777776543

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.81  E-value=1.9e-20  Score=108.14  Aligned_cols=95  Identities=22%  Similarity=0.294  Sum_probs=71.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|+|||.+....++.++|+||+|++++++++|..||.....................+...+..+.+++..||..
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  253 (271)
T 3dtc_A          174 AAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNP  253 (271)
T ss_dssp             --CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             CCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcC
Confidence            46899999999998888899999999999999999999999876544433322222122222333347799999999999


Q ss_pred             CCCCCCCHhhH-HHHH
Q 041728           84 NPESRLIITLT-DGLK   98 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~   98 (108)
                      +|.+||++.++ ..|+
T Consensus       254 ~p~~Rps~~e~l~~L~  269 (271)
T 3dtc_A          254 DPHSRPSFTNILDQLT  269 (271)
T ss_dssp             SGGGSCCHHHHHHHHH
T ss_pred             CcccCcCHHHHHHHHh
Confidence            99999999999 5554

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.81  E-value=7.5e-21  Score=111.35  Aligned_cols=98  Identities=17%  Similarity=0.135  Sum_probs=73.7

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc-CCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL-PIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||............ .........+...+..+.+++..||
T Consensus       175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  254 (297)
T 3fxz_A          175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL  254 (297)
T ss_dssp             CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHS
T ss_pred             CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHc
Confidence            357999999999998888999999999999999999999999876544333211 1111122222223377999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ..||.+||++++++.+.++
T Consensus       255 ~~dp~~Rps~~ell~h~~~  273 (297)
T 3fxz_A          255 EMDVEKRGSAKELLQHQFL  273 (297)
T ss_dssp             CSSTTTSCCHHHHTTCGGG
T ss_pred             cCChhHCcCHHHHhhChhh
Confidence            9999999999998655444

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.81  E-value=2.5e-20  Score=111.30  Aligned_cols=98  Identities=16%  Similarity=0.130  Sum_probs=73.1

Q ss_pred             ccccccceecccccc---cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAY---TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~---~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ...||+.|+|||.+.   ...++.++||||+|+++|++++|..||.+...................+...+..+.+++..
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  288 (348)
T 1u5q_A          209 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDS  288 (348)
T ss_dssp             CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHH
T ss_pred             cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Confidence            457899999999884   46688899999999999999999999987654443332211112222222334779999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ||..+|.+||++++++.+.++
T Consensus       289 ~l~~dP~~Rps~~~ll~h~~~  309 (348)
T 1u5q_A          289 CLQKIPQDRPTSEVLLKHRFV  309 (348)
T ss_dssp             HTCSSGGGSCCHHHHTTCHHH
T ss_pred             HcccChhhCcCHHHHhhChhh
Confidence            999999999999998655554

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.81  E-value=4.1e-20  Score=111.78  Aligned_cols=99  Identities=23%  Similarity=0.266  Sum_probs=71.7

Q ss_pred             ccccccceeccccccc-----------CCCcccccchhhhHHHHHHHhCCCCCCcch-hHHhhhhcCCCCCcCCCCCCCc
Q 041728            3 DILLEFMNFFEGLAYT-----------IKITEKYDVYSFGVLVLEVIKGKHPRDQMF-FLQFQLHLPIPLDEMLDPRLPP   70 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-----------~~~~~~~di~s~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   70 (108)
                      ..+||+.|+|||.+..           ..++.++||||+|+++|++++|..||.... .................+...+
T Consensus       215 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (390)
T 2zmd_A          215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE  294 (390)
T ss_dssp             CSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSC
T ss_pred             CCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccch
Confidence            4579999999998864           357889999999999999999999997542 1122221111112222334445


Q ss_pred             hHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           71 DPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        71 ~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ..+.+++..||..||.+||++.+++.+.++.
T Consensus       295 ~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  325 (390)
T 2zmd_A          295 KDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  325 (390)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHhhCcCcc
Confidence            7799999999999999999999997666553

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.80  E-value=2.4e-20  Score=111.33  Aligned_cols=99  Identities=21%  Similarity=0.298  Sum_probs=73.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhh-hcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQL-HLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..||+.|+|||.+....++.++||||+|+++|++++ |..||.+........ ..... .....+...+.++.+++..||
T Consensus       255 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l  333 (359)
T 3vhe_A          255 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMRAPDYTTPEMYQTMLDCW  333 (359)
T ss_dssp             CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHT-CCCCCCTTCCHHHHHHHHHHT
T ss_pred             cCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHc
Confidence            457888999999988889999999999999999998 999997654222211 11111 112222333478999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRLASF  103 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l~~~  103 (108)
                      ..+|.+||++.++ ..|+.+...
T Consensus       334 ~~dP~~Rps~~ell~~L~~~~~~  356 (359)
T 3vhe_A          334 HGEPSQRPTFSELVEHLGNLLQA  356 (359)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cCChhhCCCHHHHHHHHHHHHHH
Confidence            9999999999999 767766554

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.80  E-value=9.7e-20  Score=109.83  Aligned_cols=100  Identities=20%  Similarity=0.228  Sum_probs=76.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+|+.|+|||.+....++.++||||+|++++++++ |..||.................... +...+..+.+++..||.
T Consensus       253 ~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~  331 (382)
T 3tt0_A          253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK-PSNCTNELYMMMRDCWH  331 (382)
T ss_dssp             CCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC-CSSCCHHHHHHHHHHTC
T ss_pred             CCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-CccCCHHHHHHHHHHcC
Confidence            456788999999988889999999999999999998 9999987654444332222212222 22334789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLASFL  104 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~~~  104 (108)
                      .+|.+||++.++ ..|+.+....
T Consensus       332 ~dP~~Rps~~ell~~L~~~~~~~  354 (382)
T 3tt0_A          332 AVPSQRPTFKQLVEDLDRIVALT  354 (382)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHHS
T ss_pred             CChhhCcCHHHHHHHHHHHHHHH
Confidence            999999999999 7777776543

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.80  E-value=8e-20  Score=106.86  Aligned_cols=97  Identities=16%  Similarity=0.188  Sum_probs=71.2

Q ss_pred             ccccccceecccccccCC---CcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCC-CCCCCchHHHHHHh
Q 041728            3 DILLEFMNFFEGLAYTIK---ITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEML-DPRLPPDPLFDVAF   78 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~---~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~   78 (108)
                      ...||+.|+|||.+....   ++.++|+||+|+++|++++|..||.................... .+.++ ..+.+++.
T Consensus       196 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~  274 (298)
T 2zv2_A          196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIA-EDLKDLIT  274 (298)
T ss_dssp             CCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCC-HHHHHHHH
T ss_pred             CCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccC-HHHHHHHH
Confidence            356899999999987654   36789999999999999999999986654333222111111111 12333 77999999


Q ss_pred             hhcCCCCCCCCCHhhHHHHHHH
Q 041728           79 SCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        79 ~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      .||..||.+||++.+++.+.++
T Consensus       275 ~~l~~dp~~R~s~~e~l~hp~~  296 (298)
T 2zv2_A          275 RMLDKNPESRIVVPEIKLHPWV  296 (298)
T ss_dssp             HHTCSCTTTSCCHHHHTTCHHH
T ss_pred             HHhhcChhhCCCHHHHhcCccc
Confidence            9999999999999999666654

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.80  E-value=5.7e-20  Score=108.83  Aligned_cols=97  Identities=18%  Similarity=0.175  Sum_probs=73.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+|+.|+|||.+.+..++.++||||+|+++|++++ |..||.+.............. ....+...+..+.+++..||+
T Consensus       179 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~  257 (327)
T 3poz_A          179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVKCWM  257 (327)
T ss_dssp             -CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-CCCCCTTBCHHHHHHHHHHTC
T ss_pred             CCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCC-CCCCCccCCHHHHHHHHHHcC
Confidence            346778999999988889999999999999999999 999998665433333222221 122223334779999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      .+|.+||++.++ ..+..+.
T Consensus       258 ~~p~~Rps~~ell~~l~~~~  277 (327)
T 3poz_A          258 IDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             SCGGGSCCHHHHHHHHHHHH
T ss_pred             CChhhCCCHHHHHHHHHHHH
Confidence            999999999999 6666654

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.80  E-value=7.2e-20  Score=115.98  Aligned_cols=99  Identities=18%  Similarity=0.171  Sum_probs=75.4

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+|+.|+|||.+....++.++||||+|+++|++++ |..||...........+.... ....+...+..+.+++..||..
T Consensus       500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~-~~~~p~~~~~~l~~li~~cl~~  578 (613)
T 2ozo_A          500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK-RMECPPECPPELYALMSDCWIY  578 (613)
T ss_dssp             --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCS
T ss_pred             CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC-CCCCCCcCCHHHHHHHHHHcCC
Confidence            35678999999988899999999999999999998 999998766544444333322 2222333347899999999999


Q ss_pred             CCCCCCCHhhH-HHHHHHHHHH
Q 041728           84 NPESRLIITLT-DGLKRLASFL  104 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l~~~~  104 (108)
                      +|.+||++.+| ..|+.+....
T Consensus       579 dP~~RPs~~~l~~~L~~~~~~~  600 (613)
T 2ozo_A          579 KWEDRPDFLTVEQRMRACYYSL  600 (613)
T ss_dssp             STTTSCCHHHHHHHHHHHHHHH
T ss_pred             ChhHCcCHHHHHHHHHHHHHHh
Confidence            99999999999 6677665543

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.80  E-value=4e-20  Score=113.47  Aligned_cols=98  Identities=10%  Similarity=0.012  Sum_probs=75.5

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCC---CCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLD---PRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~   79 (108)
                      ...||+.|+|||.+....++.++||||+|+++|++++|..||.+.........+.........   +.+ +..+.+++..
T Consensus       172 ~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-s~~~~~li~~  250 (444)
T 3soa_A          172 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV-TPEAKDLINK  250 (444)
T ss_dssp             CSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTS-CHHHHHHHHH
T ss_pred             cccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccC-CHHHHHHHHH
Confidence            457999999999998888999999999999999999999999876544433322222122221   223 3779999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ||..||.+||++.+++.+.++.
T Consensus       251 ~L~~dP~~Rpta~e~L~hp~~~  272 (444)
T 3soa_A          251 MLTINPSKRITAAEALKHPWIS  272 (444)
T ss_dssp             HSCSSTTTSCCHHHHHHSCTTH
T ss_pred             HcCCChhHCCCHHHHhcCcccc
Confidence            9999999999999997666554

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.80  E-value=3.3e-20  Score=114.03  Aligned_cols=96  Identities=23%  Similarity=0.312  Sum_probs=73.4

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+|+.|+|||.+....++.++||||+|+++|++++ |..||.+............. .....+...+..+.+++..||.
T Consensus       345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~  423 (454)
T 1qcf_A          345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPRPENCPEELYNIMMRCWK  423 (454)
T ss_dssp             SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHT-CCCCCCTTSCHHHHHHHHHHTC
T ss_pred             CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcc
Confidence            346778999999988889999999999999999998 99999876554443322222 1222233344789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l  100 (108)
                      .||.+||++++| ..|+.+
T Consensus       424 ~dp~~RPt~~~i~~~L~~~  442 (454)
T 1qcf_A          424 NRPEERPTFEYIQSVLDDF  442 (454)
T ss_dssp             SSGGGSCCHHHHHHHHHTS
T ss_pred             CChhHCcCHHHHHHHHHHH
Confidence            999999999999 555543

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.80  E-value=1.1e-19  Score=105.44  Aligned_cols=98  Identities=18%  Similarity=0.182  Sum_probs=73.3

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+++.|+|||.+....++.++|+||+|+++|++++ |..||.+...................+.++ ..+.+++..||..
T Consensus       178 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-~~l~~li~~~l~~  256 (281)
T 1mp8_A          178 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCP-PTLYSLMTKCWAY  256 (281)
T ss_dssp             -CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCC-HHHHHHHHHHTCS
T ss_pred             CCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCC-HHHHHHHHHHccC
Confidence            45678999999988889999999999999999996 899998665433333222221222223333 7799999999999


Q ss_pred             CCCCCCCHhhH-HHHHHHHHH
Q 041728           84 NPESRLIITLT-DGLKRLASF  103 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l~~~  103 (108)
                      +|.+||++.++ ..+..+...
T Consensus       257 ~p~~Rps~~~l~~~l~~~~~~  277 (281)
T 1mp8_A          257 DPSRRPRFTELKAQLSTILEE  277 (281)
T ss_dssp             SGGGSCCHHHHHHHHHHHHHH
T ss_pred             ChhhCcCHHHHHHHHHHHHHH
Confidence            99999999999 767766543

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.80  E-value=7.7e-20  Score=108.24  Aligned_cols=97  Identities=19%  Similarity=0.176  Sum_probs=74.2

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+|+.|+|||.+....++.++||||+|+++|++++ |..||.+.................. +...+..+.+++..||..
T Consensus       215 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~  293 (325)
T 3kul_A          215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA-PMGCPHALHQLMLDCWHK  293 (325)
T ss_dssp             -CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCS
T ss_pred             CCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCC-CCCcCHHHHHHHHHHccC
Confidence            35678999999988889999999999999999998 9999987665444443322222222 223347899999999999


Q ss_pred             CCCCCCCHhhH-HHHHHHHH
Q 041728           84 NPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      ||.+||++.+| ..|+.+..
T Consensus       294 dp~~Rps~~eil~~L~~l~~  313 (325)
T 3kul_A          294 DRAQRPRFSQIVSVLDALIR  313 (325)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             ChhhCcCHHHHHHHHHHHHh
Confidence            99999999999 66776654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.80  E-value=5.9e-20  Score=109.35  Aligned_cols=99  Identities=23%  Similarity=0.264  Sum_probs=70.8

Q ss_pred             ccccccceeccccccc-----------CCCcccccchhhhHHHHHHHhCCCCCCcchh-HHhhhhcCCCCCcCCCCCCCc
Q 041728            3 DILLEFMNFFEGLAYT-----------IKITEKYDVYSFGVLVLEVIKGKHPRDQMFF-LQFQLHLPIPLDEMLDPRLPP   70 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-----------~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   70 (108)
                      ...||+.|+|||.+..           ..++.++||||+|+++|++++|..||..... ................+...+
T Consensus       168 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (343)
T 3dbq_A          168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE  247 (343)
T ss_dssp             --CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSC
T ss_pred             CCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCC
Confidence            4569999999999864           5678899999999999999999999975321 111111111112223344445


Q ss_pred             hHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           71 DPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        71 ~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ..+.+++..||..||.+||++.+++.+.++.
T Consensus       248 ~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~  278 (343)
T 3dbq_A          248 KDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  278 (343)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             HHHHHHHHHHcCCChhHCCCHHHHHhCcccc
Confidence            7799999999999999999999997666654

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.80  E-value=1.1e-19  Score=115.47  Aligned_cols=99  Identities=21%  Similarity=0.155  Sum_probs=75.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+|+.|+|||.+....++.++||||+|+++|++++ |..||.+.................. +...+.++.+++..||.
T Consensus       532 ~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~-p~~~~~~l~~li~~cl~  610 (635)
T 4fl3_A          532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC-PAGCPREMYDLMNLCWT  610 (635)
T ss_dssp             ---CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTC
T ss_pred             CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcC
Confidence            346788999999988899999999999999999998 9999987765544443333222222 22334789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLASF  103 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~~  103 (108)
                      .||.+||++.+| ..|+.+...
T Consensus       611 ~dP~~RPs~~~l~~~L~~~~~~  632 (635)
T 4fl3_A          611 YDVENRPGFAAVELRLRNYYYD  632 (635)
T ss_dssp             SSTTTSCCHHHHHHHHHHHHHH
T ss_pred             CCHhHCcCHHHHHHHHHHHHHH
Confidence            999999999999 666665443

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.80  E-value=4.4e-20  Score=109.33  Aligned_cols=102  Identities=19%  Similarity=0.236  Sum_probs=73.9

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+|+.|+|||.+....++.++||||+|+++|++++ |..||.+...................+...+..+.+++..||.
T Consensus       226 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  305 (333)
T 2i1m_A          226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWA  305 (333)
T ss_dssp             CEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhc
Confidence            346778999999988889999999999999999998 8889876432221111111111222233344789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHHHHh
Q 041728           83 GNPESRLIITLT-DGLKRLASFLL  105 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~~~~  105 (108)
                      .+|.+||++.++ ..|+.+.....
T Consensus       306 ~~p~~Rps~~~l~~~L~~~~~~~~  329 (333)
T 2i1m_A          306 LEPTHRPTFQQICSFLQEQAQEDR  329 (333)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             cChhhCcCHHHHHHHHHHHHHhhh
Confidence            999999999999 66776655443

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=1.3e-19  Score=105.49  Aligned_cols=99  Identities=17%  Similarity=0.173  Sum_probs=75.0

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+|+.|+|||.+....++.++|+||+|+++|++++ |..||.....................+.. +..+.+++..||..
T Consensus       174 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~-~~~l~~li~~~l~~  252 (287)
T 1u59_A          174 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPEC-PPELYALMSDCWIY  252 (287)
T ss_dssp             CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTC-CHHHHHHHHHTTCS
T ss_pred             cccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCc-CHHHHHHHHHHcCC
Confidence            45788999999987888899999999999999998 99999866544333322222122222333 37899999999999


Q ss_pred             CCCCCCCHhhH-HHHHHHHHHH
Q 041728           84 NPESRLIITLT-DGLKRLASFL  104 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l~~~~  104 (108)
                      +|.+||++.++ ..+..+....
T Consensus       253 ~p~~Rps~~~l~~~l~~~~~~~  274 (287)
T 1u59_A          253 KWEDRPDFLTVEQRMRACYYSL  274 (287)
T ss_dssp             SGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ChhhCcCHHHHHHHHHHHHHhc
Confidence            99999999999 6677665543

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.80  E-value=3e-19  Score=108.38  Aligned_cols=99  Identities=13%  Similarity=0.021  Sum_probs=69.9

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHH-------hhhhcCCCCCcCCCCCCCchHHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ-------FQLHLPIPLDEMLDPRLPPDPLFD   75 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~   75 (108)
                      ..+||+.|+|||.+....++.++||||+|+++|++++|..||.+.....       .+..............+ +.++.+
T Consensus       222 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-s~~~~~  300 (400)
T 1nxk_A          222 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV-SEEVKM  300 (400)
T ss_dssp             -----CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTS-CHHHHH
T ss_pred             cCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccC-CHHHHH
Confidence            4578999999999988889999999999999999999999997543211       11111111111111223 377999


Q ss_pred             HHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ++..||..||.+||++.+++.+.++..
T Consensus       301 li~~~L~~dP~~Rpt~~eil~hp~~~~  327 (400)
T 1nxk_A          301 LIRNLLKTEPTQRMTITEFMNHPWIMQ  327 (400)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             HHHHHCCCChhHCcCHHHHhcCccccC
Confidence            999999999999999999977777653

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=5.6e-20  Score=110.70  Aligned_cols=100  Identities=27%  Similarity=0.384  Sum_probs=73.5

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+|+.|+|||.+....++.++|+||+|+++|++++ |..||............... .....+...+..+.+++..||.
T Consensus       256 ~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~-~~~~~p~~~~~~l~~li~~cl~  334 (373)
T 3c1x_A          256 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-RRLLQPEYCPDPLYEVMLKCWH  334 (373)
T ss_dssp             --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcC
Confidence            346778999999988889999999999999999999 77787755433222222121 1222233344789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLASFL  104 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~~~  104 (108)
                      .+|.+||+++++ ..|+.+...+
T Consensus       335 ~dp~~RPs~~ell~~L~~i~~~~  357 (373)
T 3c1x_A          335 PKAEMRPSFSELVSRISAIFSTF  357 (373)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             CChhhCcCHHHHHHHHHHHHHhc
Confidence            999999999999 7777766543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.79  E-value=1.8e-19  Score=104.02  Aligned_cols=98  Identities=22%  Similarity=0.328  Sum_probs=75.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+|+.|+|||.+....++.++|+||+|++++++++ |..||................ ....+...+..+.+++..||.
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~  245 (269)
T 4hcu_A          167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF-RLYKPRLASTHVYQIMNHCWR  245 (269)
T ss_dssp             TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC-CCCCCTTSCHHHHHHHHHHTC
T ss_pred             cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCc-cCCCCCcCCHHHHHHHHHHcc
Confidence            346678999999988889999999999999999999 999998765544443332221 222233344789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      .+|.+||++.++ ..+..+..
T Consensus       246 ~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          246 ERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCcccCcCHHHHHHHHHHHHH
Confidence            999999999999 66666543

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.79  E-value=1.1e-19  Score=106.00  Aligned_cols=99  Identities=20%  Similarity=0.163  Sum_probs=74.9

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+++.|+|||.+....++.++|+||+|+++|++++ |..||....................... .+..+.+++..||..
T Consensus       181 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~l~~  259 (291)
T 1xbb_A          181 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG-CPREMYDLMNLCWTY  259 (291)
T ss_dssp             CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTT-CCHHHHHHHHHHTCS
T ss_pred             CCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCC-CCHHHHHHHHHHcCC
Confidence            35678999999988888899999999999999998 9999987654443332222211222223 347899999999999


Q ss_pred             CCCCCCCHhhH-HHHHHHHHHH
Q 041728           84 NPESRLIITLT-DGLKRLASFL  104 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l~~~~  104 (108)
                      ||.+||++.++ ..|+.+....
T Consensus       260 dp~~Rps~~~l~~~L~~~~~~~  281 (291)
T 1xbb_A          260 DVENRPGFAAVELRLRNYYYDV  281 (291)
T ss_dssp             STTTSCCHHHHHHHHHHHHHHH
T ss_pred             ChhhCcCHHHHHHHHHHHHHHH
Confidence            99999999999 7777765543

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.79  E-value=1.7e-20  Score=119.18  Aligned_cols=97  Identities=11%  Similarity=0.044  Sum_probs=70.5

Q ss_pred             cccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhH---HhhhhcCCCCCcCCCCCCCchHHHHHH
Q 041728            2 TDILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL---QFQLHLPIPLDEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~   77 (108)
                      .+++||+.|||||++.. ..|+.++|+||+||++|+|++|..||.+....   .........  ....|...+.++.+|+
T Consensus       348 ~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~--~~~~p~~~S~~a~dLI  425 (689)
T 3v5w_A          348 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM--AVELPDSFSPELRSLL  425 (689)
T ss_dssp             CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC--CCCCCTTSCHHHHHHH
T ss_pred             CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC--CCCCCccCCHHHHHHH
Confidence            35789999999999975 57899999999999999999999999754321   111111111  1112222347899999


Q ss_pred             hhhcCCCCCCCCC-----HhhHHHHHHH
Q 041728           78 FSCLNGNPESRLI-----ITLTDGLKRL  100 (108)
Q Consensus        78 ~~c~~~~p~~Rp~-----~~~l~~l~~l  100 (108)
                      .+||+.||.+|++     +++|..+.++
T Consensus       426 ~~lL~~dP~~Rl~~~~~ga~ei~~HpfF  453 (689)
T 3v5w_A          426 EGLLQRDVNRRLGCLGRGAQEVKESPFF  453 (689)
T ss_dssp             HHHTCSCGGGCTTCSSSTHHHHTTSGGG
T ss_pred             HHHccCCHhHCCCCCCCCHHHHhcCccc
Confidence            9999999999998     5777555544

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.79  E-value=1.3e-19  Score=106.89  Aligned_cols=97  Identities=19%  Similarity=0.210  Sum_probs=73.8

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+++.|+|||.+....++.++|+||+|+++|++++ |..||.+...................+..+ ..+.+++..||..
T Consensus       200 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~  278 (323)
T 3qup_A          200 KLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECM-EEVYDLMYQCWSA  278 (323)
T ss_dssp             -CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCC-HHHHHHHHHTTCS
T ss_pred             cCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCCCCccC-HHHHHHHHHHccC
Confidence            45678999999988889999999999999999999 899998665444333222222222223333 7799999999999


Q ss_pred             CCCCCCCHhhH-HHHHHHHH
Q 041728           84 NPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      ||.+||++.++ ..++.+..
T Consensus       279 dp~~Rps~~~l~~~l~~~l~  298 (323)
T 3qup_A          279 DPKQRPSFTCLRMELENILG  298 (323)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             ChhhCcCHHHHHHHHHHHHH
Confidence            99999999999 76776654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.79  E-value=7.2e-20  Score=112.48  Aligned_cols=95  Identities=24%  Similarity=0.272  Sum_probs=72.5

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+++.|+|||.+....++.++||||+|+++|++++ |..||.+............... ...+...+..+.+++..||..
T Consensus       342 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~-~~~~~~~~~~l~~li~~cl~~  420 (452)
T 1fmk_A          342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-MPCPPECPESLHDLMCQCWRK  420 (452)
T ss_dssp             -CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC-CCCCTTSCHHHHHHHHHHTCS
T ss_pred             cccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHccC
Confidence            46678999999988889999999999999999999 9999987665444443322222 222223347799999999999


Q ss_pred             CCCCCCCHhhH-HHHHHH
Q 041728           84 NPESRLIITLT-DGLKRL  100 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l  100 (108)
                      +|.+||++++| ..|+.+
T Consensus       421 dP~~Rpt~~~l~~~L~~~  438 (452)
T 1fmk_A          421 EPEERPTFEYLQAFLEDY  438 (452)
T ss_dssp             SGGGSCCHHHHHHHHHTT
T ss_pred             ChhhCcCHHHHHHHHHHH
Confidence            99999999999 555443

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.79  E-value=2.5e-19  Score=103.81  Aligned_cols=99  Identities=17%  Similarity=0.204  Sum_probs=74.4

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+++.|+|||.+....++.++|+||+|+++|++++ |..||....................... .+..+.+++..||.
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~l~  252 (278)
T 1byg_A          174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG-CPPAVYEVMKNCWH  252 (278)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTT-CCHHHHHHHHHHTC
T ss_pred             CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCccc-CCHHHHHHHHHHhc
Confidence            356788999999988889999999999999999998 9999876544333333322222222223 34789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLASF  103 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~~  103 (108)
                      .||.+||++.++ ..|+.+...
T Consensus       253 ~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          253 LDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CChhhCCCHHHHHHHHHHHHhh
Confidence            999999999999 777777653

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.79  E-value=1.3e-19  Score=107.62  Aligned_cols=97  Identities=16%  Similarity=0.163  Sum_probs=74.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+|+.|+|||.+....++.++|+||+|+++|++++ |..||.+..................... .+..+.+++..||.
T Consensus       236 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~l~  314 (343)
T 1luf_A          236 DAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPEN-CPLELYNLMRLCWS  314 (343)
T ss_dssp             CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTT-CCHHHHHHHHHHTC
T ss_pred             CcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCC-CCHHHHHHHHHHcc
Confidence            457788999999988889999999999999999998 9999987654444333222222222223 33789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      .+|.+||++.++ ..|+.+.
T Consensus       315 ~~p~~Rps~~~~~~~L~~~~  334 (343)
T 1luf_A          315 KLPADRPSFCSIHRILQRMC  334 (343)
T ss_dssp             SSGGGSCCHHHHHHHHHHTT
T ss_pred             cCcccCCCHHHHHHHHHHHH
Confidence            999999999999 6666543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.79  E-value=1.2e-19  Score=106.26  Aligned_cols=99  Identities=17%  Similarity=0.251  Sum_probs=75.4

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...|++.|+|||.+....++.++|+|++|+++|++++|..|+........................+ ..+.+++..||.
T Consensus       178 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~  256 (303)
T 3a7i_A          178 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYS-KPLKEFVEACLN  256 (303)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCC-HHHHHHHHHHCC
T ss_pred             ccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccC-HHHHHHHHHHcC
Confidence            3568899999999988888999999999999999999999998665444333222222222223333 779999999999


Q ss_pred             CCCCCCCCHhhHHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      .+|.+||++.+++.+.++..
T Consensus       257 ~dp~~Rps~~~ll~~~~~~~  276 (303)
T 3a7i_A          257 KEPSFRPTAKELLKHKFILR  276 (303)
T ss_dssp             SSGGGSCCHHHHTTCHHHHH
T ss_pred             CChhhCcCHHHHhhChhhhc
Confidence            99999999999966665543

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.79  E-value=1.5e-19  Score=107.11  Aligned_cols=96  Identities=18%  Similarity=0.178  Sum_probs=73.4

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+|+.|+|||.+....++.++||||+|+++|++++ |..||.+............... ...+...+..+.+++..||..
T Consensus       180 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~  258 (327)
T 3lzb_A          180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPICTIDVYMIMRKCWMI  258 (327)
T ss_dssp             CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC-CCCCTTBCHHHHHHHHHHTCS
T ss_pred             CccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC-CCCCccCCHHHHHHHHHHcCC
Confidence            45778999999988889999999999999999999 9999986654333332222211 122223347799999999999


Q ss_pred             CCCCCCCHhhH-HHHHHHH
Q 041728           84 NPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l~  101 (108)
                      +|.+||++.++ ..+..+.
T Consensus       259 dp~~Rps~~ell~~L~~~~  277 (327)
T 3lzb_A          259 DADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             SGGGSCCHHHHHHHHHHHH
T ss_pred             ChhHCcCHHHHHHHHHHHH
Confidence            99999999999 6666664

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.79  E-value=6.4e-20  Score=110.05  Aligned_cols=98  Identities=10%  Similarity=0.027  Sum_probs=74.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCC---CCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLD---PRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~   79 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||.+.........+.........   ..+ +..+.+++..
T Consensus       189 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~li~~  267 (362)
T 2bdw_A          189 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV-TPEAKSLIDS  267 (362)
T ss_dssp             CSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGS-CHHHHHHHHH
T ss_pred             cCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCC-CHHHHHHHHH
Confidence            357999999999998888999999999999999999999999866544333322111111111   122 3679999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ||..||.+||++.+++.+.++.
T Consensus       268 ~L~~dP~~R~t~~e~l~hp~~~  289 (362)
T 2bdw_A          268 MLTVNPKKRITADQALKVPWIC  289 (362)
T ss_dssp             HSCSSGGGSCCHHHHTTSHHHH
T ss_pred             HcCCChhhCcCHHHHhcCcccC
Confidence            9999999999999986666553

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.79  E-value=1.9e-19  Score=105.75  Aligned_cols=97  Identities=16%  Similarity=0.234  Sum_probs=72.7

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+|+.|+|||.+....++.++|+||+|+++|++++ |..||.+..................... .+..+.+++..||.
T Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~  290 (314)
T 2ivs_A          212 GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDN-CSEEMYRLMLQCWK  290 (314)
T ss_dssp             CCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTT-CCHHHHHHHHHHTC
T ss_pred             CCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCcc-CCHHHHHHHHHHcc
Confidence            346778999999988888999999999999999999 9999986654333332222211222223 33779999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      .||.+||++.++ ..++.+.
T Consensus       291 ~dp~~Rps~~~l~~~l~~~~  310 (314)
T 2ivs_A          291 QEPDKRPVFADISKDLEKMM  310 (314)
T ss_dssp             SSGGGSCCHHHHHHHHHHHH
T ss_pred             CChhhCcCHHHHHHHHHHHH
Confidence            999999999999 5555553

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.79  E-value=1.7e-19  Score=106.99  Aligned_cols=101  Identities=19%  Similarity=0.208  Sum_probs=75.9

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+++.|+|||.+....++.++|+||+|+++|++++ |..||.+..................... .+..+.+++..||.
T Consensus       219 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~l~  297 (334)
T 2pvf_A          219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN-CTNELYMMMRDCWH  297 (334)
T ss_dssp             CCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTT-CCHHHHHHHHHHTC
T ss_pred             CCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCcc-CCHHHHHHHHHHcc
Confidence            346778999999988888899999999999999998 9999986654333322211111112223 33779999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHHHHh
Q 041728           83 GNPESRLIITLT-DGLKRLASFLL  105 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~~~~  105 (108)
                      .+|.+||++.++ ..|+.+.....
T Consensus       298 ~dp~~Rps~~ell~~L~~l~~~~~  321 (334)
T 2pvf_A          298 AVPSQRPTFKQLVEDLDRILTLTT  321 (334)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             CChhhCcCHHHHHHHHHHHHhccc
Confidence            999999999999 77888766543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.79  E-value=2.1e-19  Score=104.30  Aligned_cols=98  Identities=20%  Similarity=0.180  Sum_probs=72.4

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+++.|+|||.+....++.++|+||+|+++|++++ |..||................ ....+...+..+.+++..||.
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~  252 (281)
T 3cc6_A          174 TRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-RLPKPDLCPPVLYTLMTRCWD  252 (281)
T ss_dssp             CCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcc
Confidence            346778999999988888999999999999999998 999987543332222111111 111222334779999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      .+|.+||++.++ ..|+.+..
T Consensus       253 ~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          253 YDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCchhCcCHHHHHHHHHHHHH
Confidence            999999999999 66776654

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.79  E-value=5.1e-20  Score=108.20  Aligned_cols=101  Identities=21%  Similarity=0.289  Sum_probs=73.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh--cCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH--LPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ...||+.|+|||.+....++.++||||+|+++|++++|..|+...........  ..........+.++ ..+.+++..|
T Consensus       181 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~  259 (310)
T 3s95_A          181 TVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCP-PSFFPITVRC  259 (310)
T ss_dssp             CCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCCTTCC-TTHHHHHHHH
T ss_pred             ccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCCCCCC-HHHHHHHHHH
Confidence            45799999999999988899999999999999999999888764321100000  00000111122333 6799999999


Q ss_pred             cCCCCCCCCCHhhH-HHHHHHHHHH
Q 041728           81 LNGNPESRLIITLT-DGLKRLASFL  104 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l-~~l~~l~~~~  104 (108)
                      |..||.+||++.++ ..|+.+...+
T Consensus       260 l~~dP~~Rps~~~l~~~L~~l~~~~  284 (310)
T 3s95_A          260 CDLDPEKRPSFVKLEHWLETLRMHL  284 (310)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ccCChhhCcCHHHHHHHHHHHHHhc
Confidence            99999999999999 7778776654

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.79  E-value=1.9e-19  Score=104.96  Aligned_cols=101  Identities=11%  Similarity=-0.027  Sum_probs=73.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHH------hh-hhcCCCCCcCCCCCCCchHHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ------FQ-LHLPIPLDEMLDPRLPPDPLFD   75 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~   75 (108)
                      ...||+.|+|||.+....++.++||||+|+++|++++|..||.+.....      .. ...............+ ..+.+
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~  252 (296)
T 4hgt_A          174 NLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYP-SEFAT  252 (296)
T ss_dssp             CCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSC-HHHHH
T ss_pred             ccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCC-HHHHH
Confidence            3578999999999988889999999999999999999999997543110      00 0000000111112233 77999


Q ss_pred             HHhhhcCCCCCCCCCHhhH-HHHHHHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLT-DGLKRLASFL  104 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l-~~l~~l~~~~  104 (108)
                      ++..||..+|.+||+++++ ..++.+....
T Consensus       253 li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~  282 (296)
T 4hgt_A          253 YLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             HHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence            9999999999999999999 6666665543

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.78  E-value=3.4e-19  Score=102.61  Aligned_cols=98  Identities=22%  Similarity=0.326  Sum_probs=74.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..++..|+|||.+....++.++|+||+|+++|++++ |..||................. ...+...+..+.+++..||.
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~l~~li~~~l~  243 (267)
T 3t9t_A          165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-LYKPRLASTHVYQIMNHCWR  243 (267)
T ss_dssp             TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC-CCCCTTSCHHHHHHHHHHTC
T ss_pred             ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCc-CCCCccCcHHHHHHHHHHcc
Confidence            346678999999988888999999999999999999 8999986654443332222211 22233344779999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      .+|.+||++.++ ..|..+..
T Consensus       244 ~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          244 ERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHH
T ss_pred             CChhhCcCHHHHHHHHHHHHh
Confidence            999999999999 66666643

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.78  E-value=1e-19  Score=105.84  Aligned_cols=95  Identities=22%  Similarity=0.293  Sum_probs=68.6

Q ss_pred             ccccccceecccccc--cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHh--hhh-cCCCCCcCCCCCCCchHHHHHH
Q 041728            3 DILLEFMNFFEGLAY--TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQF--QLH-LPIPLDEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         3 ~~~~~~~~~ape~~~--~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~l~   77 (108)
                      ...||+.|+|||.+.  ...++.++|+||+|+++|++++|..||........  ... ............+ +..+.+++
T Consensus       185 ~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li  263 (287)
T 4f0f_A          185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDC-PPRLRNVI  263 (287)
T ss_dssp             CCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTS-CHHHHHHH
T ss_pred             ccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCccc-CHHHHHHH
Confidence            356899999999984  34567899999999999999999999975432211  111 1111112222233 37799999


Q ss_pred             hhhcCCCCCCCCCHhhH-HHHH
Q 041728           78 FSCLNGNPESRLIITLT-DGLK   98 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l-~~l~   98 (108)
                      ..||..||.+||+++++ ..|+
T Consensus       264 ~~~l~~dp~~Rps~~~ll~~L~  285 (287)
T 4f0f_A          264 ELCWSGDPKKRPHFSYIVKELS  285 (287)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHhcCChhhCcCHHHHHHHHH
Confidence            99999999999999999 5444

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.78  E-value=1.7e-19  Score=107.18  Aligned_cols=100  Identities=15%  Similarity=-0.008  Sum_probs=73.5

Q ss_pred             ccccccceeccccccc--CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCC--CCchHHHHHHh
Q 041728            3 DILLEFMNFFEGLAYT--IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPR--LPPDPLFDVAF   78 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~   78 (108)
                      ...||+.|+|||.+..  ..++.++||||+|+++|++++|..||.+...................+.  ..+..+.+++.
T Consensus       233 ~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  312 (345)
T 3hko_A          233 TKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLS  312 (345)
T ss_dssp             --CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHH
T ss_pred             ccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHH
Confidence            3568999999999865  5678899999999999999999999987654433332111111111111  12367999999


Q ss_pred             hhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           79 SCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        79 ~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      .||..+|.+||++.+++++.++..
T Consensus       313 ~~l~~~p~~Rps~~~~l~hp~~~~  336 (345)
T 3hko_A          313 NLLNRNVDERFDAMRALQHPWISQ  336 (345)
T ss_dssp             HHSCSCTTTSCCHHHHHHSHHHHT
T ss_pred             HHcCCChhHCCCHHHHhcChhhcc
Confidence            999999999999999987777754

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.78  E-value=8.9e-20  Score=107.82  Aligned_cols=98  Identities=15%  Similarity=0.097  Sum_probs=73.2

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCC-cCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLD-EMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||................. ........+..+.+++..||
T Consensus       200 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  279 (321)
T 2c30_A          200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERML  279 (321)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHS
T ss_pred             cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHc
Confidence            35789999999999888899999999999999999999999986654443332211111 11111122367999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ..||.+||++.+++.+.++
T Consensus       280 ~~dp~~Rps~~ell~hp~~  298 (321)
T 2c30_A          280 VRDPQERATAQELLDHPFL  298 (321)
T ss_dssp             CSSTTTSCCHHHHHTSGGG
T ss_pred             cCChhhCcCHHHHhcChhh
Confidence            9999999999999655544

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.78  E-value=9.3e-20  Score=107.79  Aligned_cols=97  Identities=19%  Similarity=0.208  Sum_probs=72.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++ |..||.+............. .....+...+..+.+++..||.
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~  255 (325)
T 3kex_A          177 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKG-ERLAQPQICTIDVYMVMVKCWM  255 (325)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTT-CBCCCCTTBCTTTTHHHHHHTC
T ss_pred             CCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcC-CCCCCCCcCcHHHHHHHHHHcC
Confidence            456778999999988889999999999999999999 99999866543333322222 1222222333668899999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      .+|.+||++.++ ..+..+.
T Consensus       256 ~dp~~Rps~~el~~~l~~~~  275 (325)
T 3kex_A          256 IDENIRPTFKELANEFTRMA  275 (325)
T ss_dssp             SCTTTSCCHHHHHHHHHHHT
T ss_pred             CChhhCcCHHHHHHHHHHHH
Confidence            999999999999 6666553

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.78  E-value=7.2e-20  Score=109.84  Aligned_cols=97  Identities=12%  Similarity=0.004  Sum_probs=74.1

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCC---CCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEML---DPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~   79 (108)
                      ..+||+.|+|||.+....++.++|+||+|+++|++++|..||.+.........+........   .+.++ ..+.+++..
T Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~  255 (361)
T 2yab_A          177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS-ELAKDFIRK  255 (361)
T ss_dssp             CCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC-HHHHHHHHH
T ss_pred             cCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCC-HHHHHHHHH
Confidence            45799999999999888899999999999999999999999987654444332222111111   12223 679999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ||..||.+||++.+++.+.++
T Consensus       256 ~L~~dP~~R~t~~e~l~hp~~  276 (361)
T 2yab_A          256 LLVKETRKRLTIQEALRHPWI  276 (361)
T ss_dssp             HSCSSTTTSCCHHHHHTSTTT
T ss_pred             HCCCChhHCcCHHHHhcCcCc
Confidence            999999999999998655554

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.78  E-value=2.3e-19  Score=104.17  Aligned_cols=100  Identities=10%  Similarity=-0.001  Sum_probs=75.4

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCC--CCCCchHHHHHHhhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLD--PRLPPDPLFDVAFSC   80 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~c   80 (108)
                      ...||+.|+|||.+....++.++|+||+|++++++++|..||.....................  ....+..+.+++..|
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  245 (284)
T 3kk8_A          166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSM  245 (284)
T ss_dssp             CSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHH
T ss_pred             CCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHH
Confidence            357899999999998888899999999999999999999999766544333322111111111  112237799999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      |..||.+||++.+++.+.++..
T Consensus       246 l~~dp~~Rps~~~~l~h~~~~~  267 (284)
T 3kk8_A          246 LTVNPKKRITADQALKVPWICN  267 (284)
T ss_dssp             SCSSTTTSCCHHHHTTSHHHHS
T ss_pred             cccChhhCCCHHHHhcCccccC
Confidence            9999999999999977776643

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.78  E-value=4.1e-19  Score=105.04  Aligned_cols=98  Identities=18%  Similarity=0.222  Sum_probs=73.7

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..|++.|+|||.+....++.++|+||+|+++|++++ |..||.......................+ +..+.+++..||.
T Consensus       205 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~~l~  283 (327)
T 2yfx_A          205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC-PGPVYRIMTQCWQ  283 (327)
T ss_dssp             GGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTC-CHHHHHHHHHHTC
T ss_pred             cCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCCCCC-CHHHHHHHHHHhc
Confidence            457889999999988889999999999999999998 88999766544333322222122222233 3779999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      .+|.+||++.++ ..+..+..
T Consensus       284 ~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          284 HQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHH
T ss_pred             CChhhCcCHHHHHHHHHHHhc
Confidence            999999999999 65655543

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.78  E-value=1.9e-19  Score=105.01  Aligned_cols=100  Identities=11%  Similarity=-0.014  Sum_probs=72.7

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH------Hhhh-hcCCCCCcCCCCCCCchHHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL------QFQL-HLPIPLDEMLDPRLPPDPLFD   75 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~   75 (108)
                      ...||+.|+|||.+....++.++||||+|+++|++++|..||......      .... ...........+..+ ..+.+
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~  252 (296)
T 3uzp_A          174 NLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYP-SEFAT  252 (296)
T ss_dssp             CCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSC-HHHHH
T ss_pred             ccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCC-HHHHH
Confidence            356899999999998888999999999999999999999999753211      0000 000000111112233 77999


Q ss_pred             HHhhhcCCCCCCCCCHhhH-HHHHHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLT-DGLKRLASF  103 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l-~~l~~l~~~  103 (108)
                      ++..||..+|.+||+++++ ..++.+...
T Consensus       253 li~~~l~~dp~~Rps~~~l~~~l~~~~~~  281 (296)
T 3uzp_A          253 YLNFCRSLRFDDKPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             HHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence            9999999999999999999 666666543

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.78  E-value=1.5e-19  Score=105.46  Aligned_cols=100  Identities=8%  Similarity=0.007  Sum_probs=73.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchh---HHhhhhc----CCCCCcCCCCCCCchHHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF---LQFQLHL----PIPLDEMLDPRLPPDPLFD   75 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~   75 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||.....   .......    .........+.++ ..+.+
T Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~  255 (298)
T 1csn_A          177 NLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFP-EEFYK  255 (298)
T ss_dssp             CCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSC-HHHHH
T ss_pred             CCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCc-HHHHH
Confidence            35689999999999888899999999999999999999999976321   1111100    0001111122333 77999


Q ss_pred             HHhhhcCCCCCCCCCHhhH-HHHHHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLT-DGLKRLASF  103 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l-~~l~~l~~~  103 (108)
                      ++..||..+|.+||++++| ..++.+...
T Consensus       256 li~~~l~~dp~~RP~~~~l~~~l~~~~~~  284 (298)
T 1csn_A          256 YMHYARNLAFDATPDYDYLQGLFSKVLER  284 (298)
T ss_dssp             HHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence            9999999999999999999 667766554

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.78  E-value=2.2e-19  Score=106.84  Aligned_cols=98  Identities=12%  Similarity=0.069  Sum_probs=73.6

Q ss_pred             ccccccceecccccccCCC-cccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKI-TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~-~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..+||+.|+|||.+.+..+ +.++|+||+|+++|++++|..||...............  ....+...+..+.+++..||
T Consensus       166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~L  243 (336)
T 3h4j_B          166 TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSC--VYVMPDFLSPGAQSLIRRMI  243 (336)
T ss_dssp             CCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSS--CCCCCTTSCHHHHHHHHTTS
T ss_pred             cccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC--CCCCcccCCHHHHHHHHHHc
Confidence            4579999999999987665 57899999999999999999999865432222222111  11123333477999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ..||.+||+++++..+.++..
T Consensus       244 ~~dP~~Rpt~~eil~hp~~~~  264 (336)
T 3h4j_B          244 VADPMQRITIQEIRRDPWFNV  264 (336)
T ss_dssp             CSSGGGSCCHHHHTTCHHHHT
T ss_pred             CCChhHCcCHHHHHhChhhcc
Confidence            999999999999977776653

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.78  E-value=1.4e-19  Score=106.31  Aligned_cols=99  Identities=19%  Similarity=0.268  Sum_probs=72.4

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhh-hcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQL-HLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..+|+.|+|||.+....++.++|+||+|+++|++++ |..||.......... ..... .....+...+..+.+++..||
T Consensus       207 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l  285 (313)
T 1t46_A          207 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG-FRMLSPEHAPAEMYDIMKTCW  285 (313)
T ss_dssp             SEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHT-CCCCCCTTSCHHHHHHHHHHT
T ss_pred             CCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccC-CCCCCcccCCHHHHHHHHHHc
Confidence            346778999999988889999999999999999998 999987654222111 11111 111222233478999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRLASF  103 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l~~~  103 (108)
                      ..||.+||++.++ ..|+.+...
T Consensus       286 ~~dp~~Rps~~ell~~L~~~~~~  308 (313)
T 1t46_A          286 DADPLKRPTFKQIVQLIEKQISE  308 (313)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCchhCcCHHHHHHHHHHHHHH
Confidence            9999999999999 666666544

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.78  E-value=3.1e-19  Score=104.92  Aligned_cols=100  Identities=20%  Similarity=0.193  Sum_probs=74.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+++.|+|||.+....++.++|+||+|+++|++++ |..||........................ +..+.+++..||.
T Consensus       209 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~~l~  287 (313)
T 3brb_A          209 AKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDC-LDELYEIMYSCWR  287 (313)
T ss_dssp             --CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCBTTC-CHHHHHHHHHTTC
T ss_pred             cCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCCCccc-cHHHHHHHHHHcC
Confidence            346778999999988889999999999999999999 88888765543333222121111122223 3779999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLASFL  104 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~~~  104 (108)
                      .+|.+||++.++ ..|+.+...+
T Consensus       288 ~dp~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          288 TDPLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             CChhhCcCHHHHHHHHHHHHHhc
Confidence            999999999999 7777776544

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=8.6e-20  Score=108.48  Aligned_cols=98  Identities=17%  Similarity=0.130  Sum_probs=71.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhh-hcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQL-HLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++ |..||.+........ ..... .....+...+..+.+++..||
T Consensus       234 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l  312 (344)
T 1rjb_A          234 ARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNG-FKMDQPFYATEEIYIIMQSCW  312 (344)
T ss_dssp             EEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHT
T ss_pred             ccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHc
Confidence            346778999999988889999999999999999998 999997654222211 11111 122222333478999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      ..||.+||++.++ ..+..+..
T Consensus       313 ~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          313 AFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHC-
T ss_pred             CCCchhCcCHHHHHHHHHHHHH
Confidence            9999999999999 65655533

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.78  E-value=4.2e-19  Score=104.33  Aligned_cols=98  Identities=19%  Similarity=0.231  Sum_probs=71.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchh--HHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF--LQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..||+.|+|||.+....++.++||||+|+++|++++|..||.....  ..................++ ..+.+++..||
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l  241 (307)
T 2eva_A          163 NKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLP-KPIESLMTRCW  241 (307)
T ss_dssp             --CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCC-HHHHHHHHHHT
T ss_pred             CCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccC-HHHHHHHHHHh
Confidence            4689999999999888899999999999999999999999874321  11111111111112222333 77999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      ..+|.+||+++++ ..+..+..
T Consensus       242 ~~dp~~Rps~~ell~~L~~~~~  263 (307)
T 2eva_A          242 SKDPSQRPSMEEIVKIMTHLMR  263 (307)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHGG
T ss_pred             cCChhhCcCHHHHHHHHHHHHH
Confidence            9999999999999 66666644

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.78  E-value=1.8e-19  Score=107.96  Aligned_cols=99  Identities=8%  Similarity=-0.050  Sum_probs=71.4

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh-----hcCCCC----CcCCCCCCCchHHH
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL-----HLPIPL----DEMLDPRLPPDPLF   74 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----~~~~~~~~~~~~~~   74 (108)
                      ..||+.|+|||.+.+..++.++||||+|+++|++++|..||.+........     ......    .........+.++.
T Consensus       221 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (364)
T 3op5_A          221 HDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIA  300 (364)
T ss_dssp             CCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHH
T ss_pred             cCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHH
Confidence            459999999999988889999999999999999999999998532110000     000000    01111122237899


Q ss_pred             HHHhhhcCCCCCCCCCHhhH-HHHHHHHH
Q 041728           75 DVAFSCLNGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        75 ~l~~~c~~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      +++..||..+|.+||++++| ..+..+..
T Consensus       301 ~li~~cl~~~p~~RP~~~~l~~~l~~~~~  329 (364)
T 3op5_A          301 KYMETVKLLDYTEKPLYENLRDILLQGLK  329 (364)
T ss_dssp             HHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence            99999999999999999999 66666554

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=5.5e-19  Score=104.87  Aligned_cols=97  Identities=18%  Similarity=0.227  Sum_probs=73.2

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+|+.|+|||.+....++.++|+||+|+++|++++ |..||................ ....+...+..+.+++..||..
T Consensus       211 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~  289 (333)
T 1mqb_A          211 KIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF-RLPTPMDCPSAIYQLMMQCWQQ  289 (333)
T ss_dssp             CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC-CCCCCTTCBHHHHHHHHHHTCS
T ss_pred             CccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCC-cCCCcccCCHHHHHHHHHHcCC
Confidence            35678999999988889999999999999999998 999997665443333222221 1112223347799999999999


Q ss_pred             CCCCCCCHhhH-HHHHHHHH
Q 041728           84 NPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      +|.+||++.++ ..|+.+..
T Consensus       290 ~p~~Rps~~~l~~~L~~~~~  309 (333)
T 1mqb_A          290 ERARRPKFADIVSILDKLIR  309 (333)
T ss_dssp             STTTSCCHHHHHHHHHHHHH
T ss_pred             ChhhCcCHHHHHHHHHHHHh
Confidence            99999999999 66666544

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.78  E-value=4.6e-19  Score=102.91  Aligned_cols=96  Identities=19%  Similarity=0.371  Sum_probs=73.6

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+|+.|+|||.+....++.++|+||+|+++|++++ |..||................ ....+...+..+.+++..||..
T Consensus       182 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~  260 (283)
T 3gen_A          182 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-RLYRPHLASEKVYTIMYSCWHE  260 (283)
T ss_dssp             TSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCS
T ss_pred             ccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhccc-CCCCCCcCCHHHHHHHHHHccC
Confidence            45678999999988889999999999999999998 999998765544443332222 2222333447899999999999


Q ss_pred             CCCCCCCHhhH-HHHHHHH
Q 041728           84 NPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l~  101 (108)
                      +|.+||++.++ ..+..+.
T Consensus       261 ~p~~Rps~~~ll~~L~~~~  279 (283)
T 3gen_A          261 KADERPTFKILLSNILDVM  279 (283)
T ss_dssp             SGGGSCCHHHHHHHHHHHH
T ss_pred             ChhHCcCHHHHHHHHHHHh
Confidence            99999999999 5555543

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=7.2e-19  Score=102.63  Aligned_cols=101  Identities=25%  Similarity=0.347  Sum_probs=73.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhC-CCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKG-KHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+|+.|++||.+....++.++|+||+|+++|++++| .+++................ ....+...+..+.+++..||.
T Consensus       188 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~  266 (298)
T 3pls_A          188 ARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR-RLPQPEYCPDSLYQVMQQCWE  266 (298)
T ss_dssp             TTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCC-CCCCCccchHHHHHHHHHHcc
Confidence            4578899999999888899999999999999999995 55555444333322222221 122222334779999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHHHHh
Q 041728           83 GNPESRLIITLT-DGLKRLASFLL  105 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~~~~  105 (108)
                      .+|.+||++.++ ..++.+...+.
T Consensus       267 ~~p~~Rps~~~ll~~l~~~~~~l~  290 (298)
T 3pls_A          267 ADPAVRPTFRVLVGEVEQIVSALL  290 (298)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred             CChhhCcCHHHHHHHHHHHHHHHh
Confidence            999999999999 77877766543

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.78  E-value=2e-19  Score=108.25  Aligned_cols=96  Identities=19%  Similarity=0.241  Sum_probs=71.3

Q ss_pred             cccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCCC
Q 041728            6 LEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNGN   84 (108)
Q Consensus         6 ~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~   84 (108)
                      +++.|+|||.+....++.++||||+|+++|++++ |..||................ ....+...+..+.+++..||+.+
T Consensus       212 ~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~cl~~d  290 (373)
T 2qol_A          212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY-RLPPPMDCPAALYQLMLDCWQKD  290 (373)
T ss_dssp             --CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTE-ECCCCTTCBHHHHHHHHHHTCSS
T ss_pred             cCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCccccHHHHHHHHHHhCcC
Confidence            4667999999988889999999999999999997 999998665444333222221 12222233477999999999999


Q ss_pred             CCCCCCHhhH-HHHHHHHH
Q 041728           85 PESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        85 p~~Rp~~~~l-~~l~~l~~  102 (108)
                      |.+||++.+| ..|+.+..
T Consensus       291 p~~RPs~~~i~~~L~~~~~  309 (373)
T 2qol_A          291 RNNRPKFEQIVSILDKLIR  309 (373)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHh
Confidence            9999999999 66776654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=1.1e-19  Score=107.46  Aligned_cols=98  Identities=13%  Similarity=0.034  Sum_probs=75.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCC---CCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEML---DPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~c   80 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|..||.+..................   .+.++ .++.+++..|
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~~  241 (321)
T 1tki_A          163 LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEIS-IEAMDFVDRL  241 (321)
T ss_dssp             EESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSC-HHHHHHHHTT
T ss_pred             ccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCC-HHHHHHHHHH
Confidence            4689999999999887788999999999999999999999987654433332211111111   12333 6799999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      |..||.+||++.+++.+.++..
T Consensus       242 L~~dp~~Rpt~~e~l~hp~~~~  263 (321)
T 1tki_A          242 LVKERKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             SCSSGGGSCCHHHHHHSHHHHS
T ss_pred             cCCChhHCcCHHHHhcChhhcc
Confidence            9999999999999987777754

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.78  E-value=2.3e-19  Score=105.94  Aligned_cols=97  Identities=14%  Similarity=0.129  Sum_probs=69.8

Q ss_pred             cccccceecccccc-----cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC-CCcCCCCCCCchHHHHHH
Q 041728            4 ILLEFMNFFEGLAY-----TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP-LDEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~~~~~~ape~~~-----~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~   77 (108)
                      ..|++.|+|||.+.     ...++.++|+|++|+++|++++|..||............... ......... +..+.+++
T Consensus       189 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li  267 (326)
T 2x7f_A          189 FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW-SKKFQSFI  267 (326)
T ss_dssp             --CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCSCS-CHHHHHHH
T ss_pred             ccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCCcccc-CHHHHHHH
Confidence            46899999999986     456788999999999999999999999766544333322111 112222233 37899999


Q ss_pred             hhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           78 FSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ..||..||.+||++.+++.+.++.
T Consensus       268 ~~~l~~dp~~Rps~~~ll~hp~~~  291 (326)
T 2x7f_A          268 ESCLVKNHSQRPATEQLMKHPFIR  291 (326)
T ss_dssp             HHHCCSSGGGSCCHHHHHTSHHHH
T ss_pred             HHHhccChhhCCCHHHHhhChHHh
Confidence            999999999999999996666554

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.77  E-value=2e-19  Score=105.66  Aligned_cols=99  Identities=21%  Similarity=0.298  Sum_probs=72.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhh-hcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQL-HLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++ |..||.+........ ..... .....+...+..+.+++..||
T Consensus       210 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l  288 (316)
T 2xir_A          210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMRAPDYTTPEMYQTMLDCW  288 (316)
T ss_dssp             EEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHT-CCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccC-ccCCCCCCCCHHHHHHHHHHc
Confidence            346778999999988889999999999999999998 999997654222111 11111 111122223477999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRLASF  103 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l~~~  103 (108)
                      ..+|.+||++.++ ..++.+...
T Consensus       289 ~~dp~~Rps~~ell~~L~~~~~~  311 (316)
T 2xir_A          289 HGEPSQRPTFSELVEHLGNLLQA  311 (316)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCChhhCcCHHHHHHHHHHHHhh
Confidence            9999999999999 667766554

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.77  E-value=8.9e-20  Score=108.21  Aligned_cols=96  Identities=16%  Similarity=0.044  Sum_probs=73.3

Q ss_pred             ccccccceecccccccCCCc-ccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKIT-EKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~-~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..+||+.|+|||.+.+..+. .++|+||+|+++|++++|..||.+.+..............  .|...+..+.+++.+||
T Consensus       172 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~~L  249 (328)
T 3fe3_A          172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPFYMSTDCENLLKRFL  249 (328)
T ss_dssp             TTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCTTSCHHHHHHHHHHC
T ss_pred             cccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCCCCCHHHHHHHHHHC
Confidence            46799999999999877765 7899999999999999999999877654433322221111  12233477999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ..||.+||++++++.+.++
T Consensus       250 ~~dP~~R~t~~eil~h~~~  268 (328)
T 3fe3_A          250 VLNPIKRGTLEQIMKDRWI  268 (328)
T ss_dssp             CSSTTTSCCHHHHTTCTTT
T ss_pred             CCChhHCcCHHHHhcCHhh
Confidence            9999999999999655544

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.77  E-value=5.6e-19  Score=106.35  Aligned_cols=98  Identities=10%  Similarity=-0.047  Sum_probs=74.7

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCC---CCCcCCCCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPI---PLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|..||.+.........+..   .......+.++ .++.+++.+|
T Consensus       248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~li~~~  326 (373)
T 2x4f_A          248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDIS-EEAKEFISKL  326 (373)
T ss_dssp             CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSC-HHHHHHHHTT
T ss_pred             ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCC-HHHHHHHHHH
Confidence            4689999999999888889999999999999999999999987654433321111   11111112333 7799999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      |..||.+||++.+++.+.++..
T Consensus       327 L~~dp~~Rps~~e~l~hp~~~~  348 (373)
T 2x4f_A          327 LIKEKSWRISASEALKHPWLSD  348 (373)
T ss_dssp             SCSSGGGSCCHHHHHHSHHHHC
T ss_pred             cCCChhhCCCHHHHhcCcCcCC
Confidence            9999999999999977777654

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.77  E-value=1.7e-19  Score=111.95  Aligned_cols=94  Identities=21%  Similarity=0.248  Sum_probs=71.9

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+++.|+|||.+....++.++||||+|+++|++++ |..||.+............. .....+...+..+.+++..||+.
T Consensus       380 ~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~  458 (495)
T 1opk_A          380 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQW  458 (495)
T ss_dssp             CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             cCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCc
Confidence            45678999999988889999999999999999998 99999876544333322222 12222333447899999999999


Q ss_pred             CCCCCCCHhhH-HHHHH
Q 041728           84 NPESRLIITLT-DGLKR   99 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~   99 (108)
                      +|.+||++.+| ..|+.
T Consensus       459 dP~~RPs~~el~~~L~~  475 (495)
T 1opk_A          459 NPSDRPSFAEIHQAFET  475 (495)
T ss_dssp             SGGGSCCHHHHHHHHHT
T ss_pred             ChhHCcCHHHHHHHHHH
Confidence            99999999999 55544

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.77  E-value=2.4e-19  Score=112.17  Aligned_cols=95  Identities=24%  Similarity=0.272  Sum_probs=72.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..++..|+|||.+....++.++||||+|+++|++++ |..||.+.............. ....+...+..+.+++..||.
T Consensus       424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~cl~  502 (535)
T 2h8h_A          424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-RMPCPPECPESLHDLMCQCWR  502 (535)
T ss_dssp             TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTC
T ss_pred             CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcC
Confidence            346778999999988889999999999999999999 899998765544443332222 122222334779999999999


Q ss_pred             CCCCCCCCHhhH-HHHHH
Q 041728           83 GNPESRLIITLT-DGLKR   99 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~   99 (108)
                      .||++||++++| ..|+.
T Consensus       503 ~dP~~RPt~~~l~~~L~~  520 (535)
T 2h8h_A          503 KEPEERPTFEYLQAFLED  520 (535)
T ss_dssp             SSGGGSCCHHHHHHHHHT
T ss_pred             CChhHCcCHHHHHHHHHH
Confidence            999999999999 54544

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.77  E-value=4.2e-19  Score=103.71  Aligned_cols=100  Identities=27%  Similarity=0.375  Sum_probs=73.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+|+.|+|||.+....++.++|+||+|++++++++ +.+|+................. ...+...+..+.+++..||.
T Consensus       192 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~  270 (298)
T 3f66_A          192 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-LLQPEYCPDPLYEVMLKCWH  270 (298)
T ss_dssp             CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCC-CCCCccCCHHHHHHHHHHcC
Confidence            456778999999988889999999999999999999 6667765543333222222212 22233334789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLASFL  104 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~~~  104 (108)
                      .+|.+||+++++ ..++.+...+
T Consensus       271 ~~p~~Rps~~ell~~L~~~~~~~  293 (298)
T 3f66_A          271 PKAEMRPSFSELVSRISAIFSTF  293 (298)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHTS
T ss_pred             CChhhCcCHHHHHHHHHHHHHhh
Confidence            999999999999 7777766543

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.77  E-value=2.7e-19  Score=103.16  Aligned_cols=95  Identities=24%  Similarity=0.391  Sum_probs=72.2

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+|+.|+|||.+....++.++|+||+|++++++++ |..||................ ....+...+..+.+++..||..
T Consensus       166 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~  244 (268)
T 3sxs_A          166 KFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH-RLYRPHLASDTIYQIMYSCWHE  244 (268)
T ss_dssp             CCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC-CCCCCTTSCHHHHHHHHHTTCS
T ss_pred             CcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCC-CCCCCCcChHHHHHHHHHHcCC
Confidence            35667999999988888999999999999999998 999998665444433222221 2222333447899999999999


Q ss_pred             CCCCCCCHhhH-HHHHHH
Q 041728           84 NPESRLIITLT-DGLKRL  100 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l  100 (108)
                      +|.+||++.++ ..++.+
T Consensus       245 ~p~~Rps~~~ll~~L~~l  262 (268)
T 3sxs_A          245 LPEKRPTFQQLLSSIEPL  262 (268)
T ss_dssp             SGGGSCCHHHHHHHHGGG
T ss_pred             ChhhCcCHHHHHHHHHHh
Confidence            99999999999 555444

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.77  E-value=6.6e-19  Score=102.82  Aligned_cols=98  Identities=16%  Similarity=0.139  Sum_probs=71.7

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH----------------HhhhhcCCCCCcCCCCCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL----------------QFQLHLPIPLDEMLDPRL   68 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~   68 (108)
                      .++..|+|||.+....++.++||||+|+++|++++|..|+......                ......... .....+..
T Consensus       178 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  256 (295)
T 3ugc_A          178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN-GRLPRPDG  256 (295)
T ss_dssp             TCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT-CCCCCCTT
T ss_pred             CCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhcc-CcCCCCcC
Confidence            4667799999998888999999999999999999998887643211                001111111 11122333


Q ss_pred             CchHHHHHHhhhcCCCCCCCCCHhhH-HHHHHHHHH
Q 041728           69 PPDPLFDVAFSCLNGNPESRLIITLT-DGLKRLASF  103 (108)
Q Consensus        69 ~~~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l~~~  103 (108)
                      .+..+.+++..||..+|.+||++.++ ..++.+...
T Consensus       257 ~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~  292 (295)
T 3ugc_A          257 CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN  292 (295)
T ss_dssp             CCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             cCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            34789999999999999999999999 777777654

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.77  E-value=4.2e-19  Score=105.70  Aligned_cols=96  Identities=13%  Similarity=0.022  Sum_probs=73.1

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+||+.|+|||.+....++.++|+||+|+++|++++|..||.+.........+.....  ..+...+.++.+++.+||.
T Consensus       164 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~  241 (337)
T 1o6l_A          164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI--RFPRTLSPEAKSLLAGLLK  241 (337)
T ss_dssp             CCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTC
T ss_pred             ccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhh
Confidence            46799999999999888899999999999999999999999986654433322211111  1122334789999999999


Q ss_pred             CCCCCCC-----CHhhHHHHHHH
Q 041728           83 GNPESRL-----IITLTDGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp-----~~~~l~~l~~l  100 (108)
                      .||.+||     +++++..+.++
T Consensus       242 ~dP~~R~g~~~~~~~ei~~h~~f  264 (337)
T 1o6l_A          242 KDPKQRLGGGPSDAKEVMEHRFF  264 (337)
T ss_dssp             SSTTTSTTCSTTTHHHHHTSGGG
T ss_pred             cCHHHhcCCCCCCHHHHHcCCCc
Confidence            9999999     78888555443

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.77  E-value=4e-19  Score=103.39  Aligned_cols=97  Identities=20%  Similarity=0.231  Sum_probs=72.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+|..|+|||.+....++.++|+||+|++++++++ |..||.....................+...+..+.+++..||.
T Consensus       184 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  263 (291)
T 1u46_A          184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWA  263 (291)
T ss_dssp             --CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHcc
Confidence            346678999999988888899999999999999999 9999987654444332222112222222334779999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l  100 (108)
                      .+|.+||++.++ ..+..+
T Consensus       264 ~~p~~Rps~~~l~~~l~~~  282 (291)
T 1u46_A          264 HKPEDRPTFVALRDFLLEA  282 (291)
T ss_dssp             SSGGGSCCHHHHHHHHHHH
T ss_pred             CCcccCcCHHHHHHHHHHh
Confidence            999999999999 555554

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.77  E-value=1.2e-19  Score=107.43  Aligned_cols=97  Identities=13%  Similarity=0.028  Sum_probs=72.4

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcC---CCCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEM---LDPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~   79 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||.+.................   ..+.. +..+.+++..
T Consensus       176 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~  254 (326)
T 2y0a_A          176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT-SALAKDFIRR  254 (326)
T ss_dssp             CCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTS-CHHHHHHHHH
T ss_pred             cccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccC-CHHHHHHHHH
Confidence            3568999999999988889999999999999999999999997655433322111111111   11222 3678999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ||..||.+||++.+++.+.++
T Consensus       255 ~L~~dP~~Rpt~~e~l~hp~~  275 (326)
T 2y0a_A          255 LLVKDPKKRMTIQDSLQHPWI  275 (326)
T ss_dssp             HSCSSGGGSCCHHHHHHSTTT
T ss_pred             HccCChhhCCCHHHHhcCCCc
Confidence            999999999999999665544

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.77  E-value=7.7e-19  Score=101.77  Aligned_cols=97  Identities=22%  Similarity=0.269  Sum_probs=73.5

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+++.|+|||.+....++.++|+||+|++++++++ |..||.+................. .+...+..+.+++..||..
T Consensus       171 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~  249 (279)
T 1qpc_A          171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV-RPDNCPEELYQLMRLCWKE  249 (279)
T ss_dssp             CCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC-CCTTCCHHHHHHHHHHTCS
T ss_pred             CCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCC-CcccccHHHHHHHHHHhcc
Confidence            45678999999988888899999999999999998 899998665444333222222222 2223347899999999999


Q ss_pred             CCCCCCCHhhH-HHHHHHHH
Q 041728           84 NPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      +|.+||+++++ ..++.+..
T Consensus       250 ~p~~Rps~~~l~~~l~~~~~  269 (279)
T 1qpc_A          250 RPEDRPTFDYLRSVLEDFFT  269 (279)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             ChhhCCCHHHHHHHHHHHHH
Confidence            99999999999 66666554

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.77  E-value=6.6e-19  Score=104.17  Aligned_cols=97  Identities=23%  Similarity=0.258  Sum_probs=73.3

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+++.|+|||.+....++.++|+||+|+++|++++ |..||.+................. .+...+..+.+++..||..
T Consensus       202 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~  280 (327)
T 1fvr_A          202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE-KPLNCDDEVYDLMRQCWRE  280 (327)
T ss_dssp             -CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCC-CCTTBCHHHHHHHHHHTCS
T ss_pred             CCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCC-CCCCCCHHHHHHHHHHccC
Confidence            46778999999987888899999999999999998 999998765544433332221111 2222337799999999999


Q ss_pred             CCCCCCCHhhH-HHHHHHHH
Q 041728           84 NPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      +|.+||++.++ ..+..+..
T Consensus       281 dp~~Rps~~ell~~L~~~~~  300 (327)
T 1fvr_A          281 KPYERPSFAQILVSLNRMLE  300 (327)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             ChhhCcCHHHHHHHHHHHHH
Confidence            99999999999 66666544

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.77  E-value=5.6e-19  Score=105.53  Aligned_cols=98  Identities=12%  Similarity=0.004  Sum_probs=72.5

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCC---CCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEML---DPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~   79 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||.+.... .............   .+.++ ..+.+++.+
T Consensus       192 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~  269 (351)
T 3c0i_A          192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQWSHIS-ESAKDLVRR  269 (351)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH-HHHHHHHTCCCCCHHHHTTSC-HHHHHHHHH
T ss_pred             CCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH-HHHHHHcCCCCCCccccccCC-HHHHHHHHH
Confidence            356999999999998888999999999999999999999999765321 1111111101111   12233 779999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ||..||.+||++.+++.+.++..
T Consensus       270 ~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          270 MLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             HTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             HCCCChhHCcCHHHHhcChhhcC
Confidence            99999999999999976666543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.76  E-value=4.6e-19  Score=104.97  Aligned_cols=97  Identities=16%  Similarity=0.098  Sum_probs=72.5

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh---cCCCCCcCCCCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH---LPIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ...||+.|+|||.+....++.++|+|++|+++|++++|..||...........   ..........+..+ ..+.+++..
T Consensus       192 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~li~~  270 (327)
T 3lm5_A          192 EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVS-QLATDFIQS  270 (327)
T ss_dssp             --CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSC-HHHHHHHHH
T ss_pred             cccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccC-HHHHHHHHH
Confidence            35689999999999888899999999999999999999999986654433221   11111111122233 779999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ||..||.+||++++++.+.++
T Consensus       271 ~L~~dP~~Rpt~~~ll~h~~~  291 (327)
T 3lm5_A          271 LLVKNPEKRPTAEICLSHSWL  291 (327)
T ss_dssp             HSCSSGGGSCCHHHHTTCGGG
T ss_pred             HcCCChhhCcCHHHHhCCHhh
Confidence            999999999999998655554

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.76  E-value=4.5e-19  Score=106.53  Aligned_cols=99  Identities=11%  Similarity=-0.073  Sum_probs=71.1

Q ss_pred             cccccceeccccccc--CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh-----cCCCCCcCCCC--CCCchHHH
Q 041728            4 ILLEFMNFFEGLAYT--IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH-----LPIPLDEMLDP--RLPPDPLF   74 (108)
Q Consensus         4 ~~~~~~~~ape~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~   74 (108)
                      ..+|+.|+|||.+..  ..++.++|+||+|+++|++++|..||...........     ..........+  ...+..+.
T Consensus       251 ~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (371)
T 3q60_A          251 SSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVK  330 (371)
T ss_dssp             GGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHH
T ss_pred             ccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHH
Confidence            456799999999986  6788999999999999999999999986632111000     00000111111  12237799


Q ss_pred             HHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           75 DVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        75 ~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      +++..||..||.+||++.+++.+.++..
T Consensus       331 ~li~~~L~~dP~~Rpt~~e~l~hp~f~~  358 (371)
T 3q60_A          331 TLIGRFLNFDRRRRLLPLEAMETPEFLQ  358 (371)
T ss_dssp             HHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred             HHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence            9999999999999999999966666654

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.76  E-value=1.1e-18  Score=104.21  Aligned_cols=100  Identities=13%  Similarity=0.049  Sum_probs=73.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchh-HHh----hhhcCCCCCcCCCC----CCCchHHH
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF-LQF----QLHLPIPLDEMLDP----RLPPDPLF   74 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~----~~~~~~~~   74 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|..||..... ...    ..............    ...+..+.
T Consensus       228 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  307 (352)
T 2jii_A          228 HEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQ  307 (352)
T ss_dssp             TCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHH
T ss_pred             ccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHH
Confidence            4789999999999888899999999999999999999999986531 111    11111111111111    11237799


Q ss_pred             HHHhhhcCCCCCCCCCHhhH-HHHHHHHHH
Q 041728           75 DVAFSCLNGNPESRLIITLT-DGLKRLASF  103 (108)
Q Consensus        75 ~l~~~c~~~~p~~Rp~~~~l-~~l~~l~~~  103 (108)
                      +++..||..||.+||+++++ ..|..+...
T Consensus       308 ~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  337 (352)
T 2jii_A          308 KYLKVVMALTYEEKPPYAMLRNNLEALLQD  337 (352)
T ss_dssp             HHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence            99999999999999999999 767766554

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.76  E-value=1.2e-18  Score=102.07  Aligned_cols=97  Identities=10%  Similarity=0.025  Sum_probs=73.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC---CCcCCCCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP---LDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ..|++.|+|||.+....++.++|+||+|+++|++++|..||...............   ......+.++ ..+.+++..|
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~li~~~  245 (304)
T 2jam_A          167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDIS-ESAKDFICHL  245 (304)
T ss_dssp             HHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSC-HHHHHHHHHH
T ss_pred             ccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCC-HHHHHHHHHH
Confidence            35889999999998888999999999999999999999999765433332221111   1111122233 7799999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      |..||.+||++.+++.+.++.
T Consensus       246 l~~dp~~Rps~~~~l~h~~~~  266 (304)
T 2jam_A          246 LEKDPNERYTCEKALSHPWID  266 (304)
T ss_dssp             HCSSTTTSCCHHHHHTSHHHH
T ss_pred             cCCChhHCcCHHHHhcCcccc
Confidence            999999999999997666654

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.76  E-value=8.2e-19  Score=101.71  Aligned_cols=99  Identities=19%  Similarity=0.186  Sum_probs=75.7

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...|++.|+|||.+....++.++|+|++|++++++++|..||...............  ....+...+..+.+++..||.
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~  243 (279)
T 3fdn_A          166 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--EFTFPDFVTEGARDLISRLLK  243 (279)
T ss_dssp             --CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT--CCCCCTTSCHHHHHHHHHHCC
T ss_pred             ccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhC--CCCCCCcCCHHHHHHHHHHhc
Confidence            356899999999998888889999999999999999999999866544333322111  111122334779999999999


Q ss_pred             CCCCCCCCHhhHHHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLASF  103 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~~~  103 (108)
                      .+|.+||++.+++.+.++...
T Consensus       244 ~~p~~Rps~~e~l~h~~~~~~  264 (279)
T 3fdn_A          244 HNPSQRPMLREVLEHPWITAN  264 (279)
T ss_dssp             SSGGGSCCHHHHHHCHHHHHH
T ss_pred             cChhhCCCHHHHhhCccccCC
Confidence            999999999999888887654

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.76  E-value=5.7e-19  Score=103.95  Aligned_cols=98  Identities=14%  Similarity=0.123  Sum_probs=71.0

Q ss_pred             cccccceeccccccc---------CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHH
Q 041728            4 ILLEFMNFFEGLAYT---------IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLF   74 (108)
Q Consensus         4 ~~~~~~~~ape~~~~---------~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (108)
                      ..|++.|+|||.+..         ..++.++|+||+|+++|++++|..||.....................+...+..+.
T Consensus       194 ~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  273 (319)
T 2y4i_B          194 QNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEIS  273 (319)
T ss_dssp             CSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHH
T ss_pred             CCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHH
Confidence            358899999998864         34678999999999999999999999876544333322222122222212236799


Q ss_pred             HHHhhhcCCCCCCCCCHhhH-HHHHHHH
Q 041728           75 DVAFSCLNGNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        75 ~l~~~c~~~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      +++..||..+|.+||++.++ ..++.+.
T Consensus       274 ~li~~~l~~~p~~Rpt~~~l~~~l~~l~  301 (319)
T 2y4i_B          274 DILLFCWAFEQEERPTFTKLMDMLEKLP  301 (319)
T ss_dssp             HHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            99999999999999999999 6555544

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.76  E-value=4.3e-19  Score=107.32  Aligned_cols=96  Identities=16%  Similarity=0.028  Sum_probs=72.9

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC---CCcCCCCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP---LDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|..||.+.............   ........+ +..+.+++..|
T Consensus       210 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-s~~~~~li~~~  288 (387)
T 1kob_A          210 TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV-SPEAKDFIKNL  288 (387)
T ss_dssp             ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTS-CHHHHHHHHTT
T ss_pred             eccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccC-CHHHHHHHHHH
Confidence            46899999999998888999999999999999999999999876544333321111   111111223 37799999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      |..||.+||++.+++.+.++
T Consensus       289 L~~dP~~Rpt~~ell~hp~~  308 (387)
T 1kob_A          289 LQKEPRKRLTVHDALEHPWL  308 (387)
T ss_dssp             SCSSGGGSCCHHHHHTSTTT
T ss_pred             cCCChhHCcCHHHHhhCccc
Confidence            99999999999998655443

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.76  E-value=4.4e-19  Score=104.82  Aligned_cols=100  Identities=12%  Similarity=0.088  Sum_probs=67.9

Q ss_pred             cccccceeccccccc-----CCCcccccchhhhHHHHHHHhCCCCCCcchh----------------HHhhhhc-CCCCC
Q 041728            4 ILLEFMNFFEGLAYT-----IKITEKYDVYSFGVLVLEVIKGKHPRDQMFF----------------LQFQLHL-PIPLD   61 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~----------------~~~~~~~-~~~~~   61 (108)
                      ..||+.|+|||.+..     ..++.++||||+|+++|++++|..||.+...                ....... .....
T Consensus       193 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (322)
T 3soc_A          193 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKR  272 (322)
T ss_dssp             CCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCC
T ss_pred             CccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCC
Confidence            568999999999875     2455688999999999999999998864321                0000011 11111


Q ss_pred             cCCCCCC----CchHHHHHHhhhcCCCCCCCCCHhhH-HHHHHHHHH
Q 041728           62 EMLDPRL----PPDPLFDVAFSCLNGNPESRLIITLT-DGLKRLASF  103 (108)
Q Consensus        62 ~~~~~~~----~~~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l~~~  103 (108)
                      .......    ....+.+++..||..||.+||++.++ ..|+.+...
T Consensus       273 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          273 PVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             CCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            1111100    11348899999999999999999999 777777653

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.76  E-value=7.4e-19  Score=103.33  Aligned_cols=98  Identities=20%  Similarity=0.265  Sum_probs=73.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcC-CCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP-IPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..|++.|+|||.+....++.++|+|++|+++|++++|..||............. ........+...+..+.+++..||.
T Consensus       185 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  264 (314)
T 3com_A          185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLV  264 (314)
T ss_dssp             CCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTC
T ss_pred             cCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHcc
Confidence            468899999999988888999999999999999999999998665443322111 1111111222234779999999999


Q ss_pred             CCCCCCCCHhhHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .||.+||++.+++.+.++.
T Consensus       265 ~dp~~Rpt~~~ll~~~~~~  283 (314)
T 3com_A          265 KSPEQRATATQLLQHPFVR  283 (314)
T ss_dssp             SCTTTSCCHHHHTTSHHHH
T ss_pred             CChhhCcCHHHHHhCHHHh
Confidence            9999999999996666654

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.76  E-value=9.3e-19  Score=108.33  Aligned_cols=99  Identities=18%  Similarity=0.082  Sum_probs=74.1

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCC--CCCchHHHHHHhhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDP--RLPPDPLFDVAFSC   80 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~c   80 (108)
                      ...||+.|+|||.+. +.++.++||||+|+++|++++|..||.+...................+  ...+..+.+++..|
T Consensus       182 ~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~  260 (486)
T 3mwu_A          182 DRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKM  260 (486)
T ss_dssp             CCTTGGGGCCGGGGG-SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHH
T ss_pred             CCcCCCCCCCHHHhC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHH
Confidence            356999999999986 468899999999999999999999998765444333222111111111  11236799999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      |..+|.+||++.+++.+.++..
T Consensus       261 L~~dp~~R~t~~~~l~hp~~~~  282 (486)
T 3mwu_A          261 LTFHPSLRITATQCLEHPWIQK  282 (486)
T ss_dssp             TCSSTTTSCCHHHHHHCHHHHH
T ss_pred             cCCChhhCcCHHHHhcCHhhcc
Confidence            9999999999999977777654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.76  E-value=1.1e-18  Score=101.44  Aligned_cols=97  Identities=20%  Similarity=0.229  Sum_probs=72.8

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+++.|+|||.+....++.++|+||+|+++|++++ |..||.................. ..+...+..+.+++..||..
T Consensus       173 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~  251 (288)
T 3kfa_A          173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM-ERPEGCPEKVYELMRACWQW  251 (288)
T ss_dssp             EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCS
T ss_pred             ccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCC-CCCCCCCHHHHHHHHHHhCC
Confidence            35678999999988889999999999999999999 89998765543333322222111 22223347899999999999


Q ss_pred             CCCCCCCHhhH-HHHHHHHH
Q 041728           84 NPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      ||.+||++.++ ..++.+..
T Consensus       252 dp~~Rps~~~~~~~l~~~~~  271 (288)
T 3kfa_A          252 NPSDRPSFAEIHQAFETMFQ  271 (288)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             ChhhCcCHHHHHHHHHHHHH
Confidence            99999999999 66666544

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.76  E-value=4.8e-19  Score=102.58  Aligned_cols=92  Identities=15%  Similarity=0.053  Sum_probs=69.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|+|||.+....++.++|+||+|+++|++++|..||........................ +..+.+++..||..
T Consensus       176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~-~~~l~~li~~~l~~  254 (279)
T 2w5a_A          176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY-SDELNEIITRMLNL  254 (279)
T ss_dssp             HHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTTS-CHHHHHHHHHHTCS
T ss_pred             cCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCccc-CHHHHHHHHHHcCC
Confidence            35788999999998888899999999999999999999999876543333222222122222233 37799999999999


Q ss_pred             CCCCCCCHhhHHH
Q 041728           84 NPESRLIITLTDG   96 (108)
Q Consensus        84 ~p~~Rp~~~~l~~   96 (108)
                      +|.+||++++++.
T Consensus       255 ~p~~Rps~~~ll~  267 (279)
T 2w5a_A          255 KDYHRPSVEEILE  267 (279)
T ss_dssp             SGGGSCCHHHHHT
T ss_pred             CcccCCCHHHHHh
Confidence            9999999999843

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.76  E-value=1.6e-18  Score=101.04  Aligned_cols=96  Identities=15%  Similarity=0.214  Sum_probs=68.1

Q ss_pred             cccccceecccccc---cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh----hc-CCCCCcCCCCCCCchHHHH
Q 041728            4 ILLEFMNFFEGLAY---TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL----HL-PIPLDEMLDPRLPPDPLFD   75 (108)
Q Consensus         4 ~~~~~~~~ape~~~---~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~   75 (108)
                      ..||+.|+|||.+.   ...++.++|+||+|+++|++++|..||..........    .. ...........++ ..+.+
T Consensus       182 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~  260 (289)
T 3og7_A          182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCP-KRMKR  260 (289)
T ss_dssp             --CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSC-HHHHH
T ss_pred             cCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCC-HHHHH
Confidence            46899999999886   4567889999999999999999999997654322211    11 1111111122333 77999


Q ss_pred             HHhhhcCCCCCCCCCHhhH-HHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l-~~l~~l  100 (108)
                      ++..||..+|.+||++.++ ..|+.+
T Consensus       261 li~~~l~~~p~~Rps~~ell~~L~~l  286 (289)
T 3og7_A          261 LMAECLKKKRDERPSFPRILAEIEEL  286 (289)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             HHHHHccCChhhCCCHHHHHHHHHHH
Confidence            9999999999999999999 555543

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.76  E-value=1.1e-18  Score=102.56  Aligned_cols=98  Identities=23%  Similarity=0.265  Sum_probs=69.6

Q ss_pred             cccccceeccccccc-----------CCCcccccchhhhHHHHHHHhCCCCCCcchh-HHhhhhcCCCCCcCCCCCCCch
Q 041728            4 ILLEFMNFFEGLAYT-----------IKITEKYDVYSFGVLVLEVIKGKHPRDQMFF-LQFQLHLPIPLDEMLDPRLPPD   71 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-----------~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   71 (108)
                      ..|++.|+|||.+..           ..++.++|+||+|+++|++++|..||..... ................+...+.
T Consensus       188 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (313)
T 3cek_A          188 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK  267 (313)
T ss_dssp             --CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCH
T ss_pred             CCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchH
Confidence            468999999999864           3677899999999999999999999875421 1111111111122222333447


Q ss_pred             HHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           72 PLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        72 ~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .+.+++..||..||.+||++.+++.+.++.
T Consensus       268 ~l~~li~~~l~~dp~~Rps~~ell~h~~~~  297 (313)
T 3cek_A          268 DLQDVLKCCLKRDPKQRISIPELLAHPYVQ  297 (313)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             HHHHHHHHHccCCcccCcCHHHHhcCcccc
Confidence            799999999999999999999997666654

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.76  E-value=8e-19  Score=104.83  Aligned_cols=97  Identities=11%  Similarity=-0.056  Sum_probs=69.0

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhh-hhcCCCCCcC---CCCCCCchHHHHHHh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQ-LHLPIPLDEM---LDPRLPPDPLFDVAF   78 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~l~~   78 (108)
                      ...||+.|+|||.+.+..++.++|+||+|+++|++++|..||......... ..........   ..+..+ ..+.+++.
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~li~  287 (349)
T 2w4o_A          209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVS-LNAKDLVR  287 (349)
T ss_dssp             ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSC-HHHHHHHH
T ss_pred             cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCC-HHHHHHHH
Confidence            356899999999998888999999999999999999999998755432211 1111111111   112233 67999999


Q ss_pred             hhcCCCCCCCCCHhhHHHHHHH
Q 041728           79 SCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        79 ~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      .||..||.+||++.+++.+.++
T Consensus       288 ~~L~~dP~~Rpt~~e~l~hp~~  309 (349)
T 2w4o_A          288 KLIVLDPKKRLTTFQALQHPWV  309 (349)
T ss_dssp             TTSCSSGGGSCCHHHHHHSTTT
T ss_pred             HHccCChhhCcCHHHHhcCccc
Confidence            9999999999999998665544

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.76  E-value=1.2e-18  Score=104.28  Aligned_cols=102  Identities=14%  Similarity=0.056  Sum_probs=73.2

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh---------------------------
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH---------------------------   55 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~---------------------------   55 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||...........                           
T Consensus       189 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (360)
T 3eqc_A          189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFG  268 (360)
T ss_dssp             --CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------------
T ss_pred             CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccc
Confidence            45789999999999888899999999999999999999999875432111000                           


Q ss_pred             ---------------cCCCCCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHHHH
Q 041728           56 ---------------LPIPLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLASFL  104 (108)
Q Consensus        56 ---------------~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~~~  104 (108)
                                     ..............+..+.+++..||..||.+||++.+++.+.++....
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  332 (360)
T 3eqc_A          269 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD  332 (360)
T ss_dssp             -----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             cCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence                           0000011111112236799999999999999999999998778776543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.76  E-value=8.4e-19  Score=111.86  Aligned_cols=98  Identities=18%  Similarity=0.180  Sum_probs=73.5

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+|+.|+|||.+....++.++||||+|+++|++++ |..||.+...................+.+ +..+.+++..||.
T Consensus       552 ~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~-~~~l~~li~~~l~  630 (656)
T 2j0j_A          552 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC-PPTLYSLMTKCWA  630 (656)
T ss_dssp             --CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTC-CHHHHHHHHHHTC
T ss_pred             CCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccc-cHHHHHHHHHHcC
Confidence            346778999999988889999999999999999997 99999876544443322222112222333 3789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      .||.+||++.++ ..|..+..
T Consensus       631 ~dP~~RPs~~el~~~L~~il~  651 (656)
T 2j0j_A          631 YDPSRRPRFTELKAQLSTILE  651 (656)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHH
T ss_pred             CChhHCcCHHHHHHHHHHHHH
Confidence            999999999999 66766643

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.76  E-value=3e-19  Score=107.51  Aligned_cols=93  Identities=13%  Similarity=0.017  Sum_probs=67.9

Q ss_pred             ccccccceecccccccC-----------CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCch
Q 041728            3 DILLEFMNFFEGLAYTI-----------KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPD   71 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~-----------~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (108)
                      ...| +.|+|||.+...           .++.++||||+|+++|++++|..||..............     ..+.++ .
T Consensus       262 ~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~-----~~~~~~-~  334 (377)
T 3byv_A          262 SSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFR-----SCKNIP-Q  334 (377)
T ss_dssp             CCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGGS-----SCCCCC-H
T ss_pred             CCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhhh-----hccCCC-H
Confidence            3557 899999999876           789999999999999999999999976543222111111     112333 7


Q ss_pred             HHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           72 PLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        72 ~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      .+.+++..||..||.+||++.+++.+.++..
T Consensus       335 ~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          335 PVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             HHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             HHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence            7999999999999999999999966555543

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.76  E-value=1.1e-18  Score=101.51  Aligned_cols=99  Identities=14%  Similarity=0.070  Sum_probs=70.2

Q ss_pred             cccccceeccccc----ccCCCcccccchhhhHHHHHHHhCCCCCCcch-hHHhhh-hcCCCCCcCCCCCCCchHHHHHH
Q 041728            4 ILLEFMNFFEGLA----YTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF-FLQFQL-HLPIPLDEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~~~~~~ape~~----~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~   77 (108)
                      ..||+.|+|||.+    ....++.++|+||+|++++++++|..||.... ...... .............. +..+.+++
T Consensus       169 ~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li  247 (290)
T 3fme_A          169 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF-SAEFVDFT  247 (290)
T ss_dssp             -CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTS-CHHHHHHH
T ss_pred             cCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccC-CHHHHHHH
Confidence            4689999999996    44567889999999999999999999997532 111111 11111122222223 37799999


Q ss_pred             hhhcCCCCCCCCCHhhHHHHHHHHHH
Q 041728           78 FSCLNGNPESRLIITLTDGLKRLASF  103 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~~l~~l~~~  103 (108)
                      ..||..+|.+||++.+++.+.++...
T Consensus       248 ~~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          248 SQCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             HHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHhhcChhhCcCHHHHHhCcccccC
Confidence            99999999999999999777776553

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.76  E-value=9.3e-19  Score=104.97  Aligned_cols=100  Identities=12%  Similarity=0.026  Sum_probs=67.1

Q ss_pred             ccccccceecccccccCCCccc-ccchhhhHHHHHHHhCCCCCCcchhH----HhhhhcCCCCCcCCCCCCCchHHHHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEK-YDVYSFGVLVLEVIKGKHPRDQMFFL----QFQLHLPIPLDEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~-~di~s~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~   77 (108)
                      ...||+.|+|||.+....+..+ +||||+|+++|++++|..||......    ...................+..+.+++
T Consensus       176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li  255 (361)
T 3uc3_A          176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLI  255 (361)
T ss_dssp             -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHH
T ss_pred             CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHH
Confidence            3568999999999987777655 89999999999999999999764321    111111111111212212237799999


Q ss_pred             hhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           78 FSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      .+||..+|.+||++.+++.+.++..
T Consensus       256 ~~~L~~dP~~Rps~~ell~hp~f~~  280 (361)
T 3uc3_A          256 SRIFVADPATRISIPEIKTHSWFLK  280 (361)
T ss_dssp             HHHSCSCTTTSCCHHHHHTSHHHHT
T ss_pred             HHHccCChhHCcCHHHHHhCcchhc
Confidence            9999999999999999977777643

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.76  E-value=1.6e-19  Score=106.06  Aligned_cols=99  Identities=11%  Similarity=0.051  Sum_probs=71.4

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CC----CCCcC-----------
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PI----PLDEM-----------   63 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~~~-----------   63 (108)
                      ...||+.|+|||.+....++.++||||+|+++|++++|..||.+..........    ..    .....           
T Consensus       178 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (308)
T 3g33_A          178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPR  257 (308)
T ss_dssp             GGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCC
T ss_pred             CccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCC
Confidence            357899999999998888999999999999999999999999765433222110    00    00000           


Q ss_pred             -------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           64 -------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        64 -------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                             ..+..+ ..+.+++..||+.||.+||++.+++++.++..
T Consensus       258 ~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~  302 (308)
T 3g33_A          258 GPRPVQSVVPEME-ESGAQLLLEMLTFNPHKRISAFRALQHSYLHK  302 (308)
T ss_dssp             CCCCHHHHSCSCC-HHHHHHHHHHTCSSTTTSCCHHHHHTSTTC--
T ss_pred             CCCcHHHhCcccc-HHHHHHHHHHhcCCCccCCCHHHHhcCccccC
Confidence                   011222 66899999999999999999999976665543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.75  E-value=7e-19  Score=103.87  Aligned_cols=97  Identities=12%  Similarity=-0.003  Sum_probs=72.8

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCC---CCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEML---DPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~   79 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||.+..................   .+.. +..+.+++..
T Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~li~~  255 (321)
T 2a2a_A          177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT-SELAKDFIRK  255 (321)
T ss_dssp             CCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTC-CHHHHHHHHT
T ss_pred             ccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhccc-CHHHHHHHHH
Confidence            35689999999999888889999999999999999999999986654433332211111111   1222 3679999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ||..||.+||++.+++.+.++
T Consensus       256 ~l~~dp~~Rps~~e~l~hp~~  276 (321)
T 2a2a_A          256 LLVKETRKRLTIQEALRHPWI  276 (321)
T ss_dssp             TSCSSTTTSCCHHHHHHSTTT
T ss_pred             HcCCChhhCcCHHHHhcCccc
Confidence            999999999999998665544

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.75  E-value=2.3e-18  Score=101.15  Aligned_cols=99  Identities=18%  Similarity=0.126  Sum_probs=69.5

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchh--HHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF--LQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..|++.|+|||.+....++.++|+|++|+++|++++|..||.+...  ....................+..+.+++..||
T Consensus       196 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  275 (310)
T 2wqm_A          196 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCI  275 (310)
T ss_dssp             ---CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHT
T ss_pred             cCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHc
Confidence            4588999999999888899999999999999999999999865421  11111111111111112223477999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      ..||.+||++.++ ..++.+..
T Consensus       276 ~~dp~~Rps~~~il~~l~~l~~  297 (310)
T 2wqm_A          276 NPDPEKRPDVTYVYDVAKRMHA  297 (310)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCChhhCCCHHHHHHHHHHHHH
Confidence            9999999999999 66776654

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.75  E-value=1.9e-18  Score=100.43  Aligned_cols=99  Identities=17%  Similarity=0.058  Sum_probs=75.6

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...|++.|+|||.+....++.++|+|++|++++++++|..||.................  ..+...+..+.+++..||.
T Consensus       171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~  248 (284)
T 2vgo_A          171 TMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL--KFPPFLSDGSKDLISKLLR  248 (284)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC--CCCTTSCHHHHHHHHHHSC
T ss_pred             cccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcccc--CCCCcCCHHHHHHHHHHhh
Confidence            35689999999999888889999999999999999999999986554333222211111  1122233779999999999


Q ss_pred             CCCCCCCCHhhHHHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLASF  103 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~~~  103 (108)
                      .+|.+||++++++.+.++...
T Consensus       249 ~~p~~Rps~~~ll~h~~~~~~  269 (284)
T 2vgo_A          249 YHPPQRLPLKGVMEHPWVKAN  269 (284)
T ss_dssp             SSGGGSCCHHHHHTCHHHHHH
T ss_pred             cCHhhCCCHHHHhhCHHHHhh
Confidence            999999999999777777653

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.75  E-value=1.3e-18  Score=107.93  Aligned_cols=99  Identities=14%  Similarity=0.080  Sum_probs=75.1

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCC---CCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLD---PRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~   79 (108)
                      ..+||+.|+|||.+. ..++.++||||+|+++|++++|..||.+...................   +.++ ..+.+++..
T Consensus       197 ~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~  274 (494)
T 3lij_A          197 ERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVS-EGAKDLIKQ  274 (494)
T ss_dssp             CCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSC-HHHHHHHHH
T ss_pred             ccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCC-HHHHHHHHH
Confidence            456999999999876 56889999999999999999999999876544433322221111111   2233 779999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRLASF  103 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l~~~  103 (108)
                      ||..+|.+||++.+++.+.++...
T Consensus       275 ~L~~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          275 MLQFDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             HTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred             HCCCChhhCccHHHHhcCcccccC
Confidence            999999999999999777777653

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.75  E-value=2.9e-19  Score=106.70  Aligned_cols=96  Identities=18%  Similarity=0.127  Sum_probs=73.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+||+.|+|||.+.+..++.++|+||+|+++|++++|..||.+.........+....  ...+...+..+.+++.+||.
T Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~lL~  254 (345)
T 1xjd_A          177 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKDLLVKLFV  254 (345)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHSC
T ss_pred             CCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCC--CCCCcccCHHHHHHHHHHhc
Confidence            4679999999999988889999999999999999999999998765444333221111  11222334789999999999


Q ss_pred             CCCCCCCCHh-hHHHHHHH
Q 041728           83 GNPESRLIIT-LTDGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp~~~-~l~~l~~l  100 (108)
                      .||.+||++. ++..+.++
T Consensus       255 ~dp~~R~~~~~~i~~hp~f  273 (345)
T 1xjd_A          255 REPEKRLGVRGDIRQHPLF  273 (345)
T ss_dssp             SSGGGSBTTBSCGGGSGGG
T ss_pred             CCHhHcCCChHHHHcCccc
Confidence            9999999997 77544443

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.75  E-value=8.8e-19  Score=102.06  Aligned_cols=96  Identities=15%  Similarity=0.116  Sum_probs=70.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHh-hhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQF-QLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..|++.|+|||.+. ..++.++|+||+|++++++++|..||........ .............+......+.+++..||.
T Consensus       190 ~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  268 (290)
T 1t4h_A          190 VIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIR  268 (290)
T ss_dssp             SCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSC
T ss_pred             ccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHcc
Confidence            56899999999876 5688999999999999999999999976432222 222222222222222233679999999999


Q ss_pred             CCCCCCCCHhhHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l  100 (108)
                      .+|.+||++.+++.+.++
T Consensus       269 ~dp~~Rps~~ell~h~~f  286 (290)
T 1t4h_A          269 QNKDERYSIKDLLNHAFF  286 (290)
T ss_dssp             SSGGGSCCHHHHHTSGGG
T ss_pred             CChhhCCCHHHHhhCccc
Confidence            999999999999655443

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.75  E-value=7.7e-19  Score=104.71  Aligned_cols=99  Identities=14%  Similarity=0.066  Sum_probs=72.8

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch---hHHhhhhcCCCCCcCC---CCCCCchHHHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF---FLQFQLHLPIPLDEML---DPRLPPDPLFDV   76 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~~l   76 (108)
                      ..+||+.|+|||.+....++.++|+||+|+++|++++|..||.+..   .......+........   .+.+ +..+.++
T Consensus       179 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-s~~~~~l  257 (342)
T 2qr7_A          179 TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV-SDTAKDL  257 (342)
T ss_dssp             CSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTS-CHHHHHH
T ss_pred             ccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccC-CHHHHHH
Confidence            4578999999999987778899999999999999999999997531   1111111111111111   1223 3779999


Q ss_pred             HhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           77 AFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      +.+||..||.+||++.+++.+.++..
T Consensus       258 i~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          258 VSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             HHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             HHHHCCCChhHCcCHHHHhcCCeecC
Confidence            99999999999999999977777643

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.75  E-value=8.6e-19  Score=103.34  Aligned_cols=93  Identities=23%  Similarity=0.175  Sum_probs=70.3

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      .+|+.|+|||.+....++.++|+||+|+++|++++ |..||.......................+ +..+.+++..||..
T Consensus       201 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~~l~~  279 (322)
T 1p4o_A          201 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC-PDMLFELMRMCWQY  279 (322)
T ss_dssp             EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTC-CHHHHHHHHHHTCS
T ss_pred             CCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCCCCC-CHHHHHHHHHHcCC
Confidence            45778999999988889999999999999999999 88898866544433322222112222233 37799999999999


Q ss_pred             CCCCCCCHhhH-HHHH
Q 041728           84 NPESRLIITLT-DGLK   98 (108)
Q Consensus        84 ~p~~Rp~~~~l-~~l~   98 (108)
                      +|.+||++.++ ..++
T Consensus       280 dp~~Rps~~e~l~~L~  295 (322)
T 1p4o_A          280 NPKMRPSFLEIISSIK  295 (322)
T ss_dssp             SGGGSCCHHHHHHHHG
T ss_pred             CcccCcCHHHHHHHHH
Confidence            99999999999 4443

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.75  E-value=2.1e-18  Score=100.12  Aligned_cols=99  Identities=12%  Similarity=0.051  Sum_probs=74.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcC---CCCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEM---LDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~c   80 (108)
                      ..|++.|+|||.+....++.++|+||+|++++++++|..||...................   ..+.. +..+.+++..|
T Consensus       171 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~  249 (283)
T 3bhy_A          171 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT-SELAKDFIRRL  249 (283)
T ss_dssp             -CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTC-CHHHHHHHHTT
T ss_pred             cCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccC-CHHHHHHHHHH
Confidence            458899999999988888999999999999999999999998665433322211111111   11222 36799999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRLASF  103 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l~~~  103 (108)
                      |..||.+||++.+++.+.++...
T Consensus       250 l~~dp~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          250 LVKDPKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             SCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             ccCCHhHCcCHHHHHhCHHHHHH
Confidence            99999999999999777766554

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.75  E-value=2.7e-19  Score=109.37  Aligned_cols=101  Identities=11%  Similarity=-0.001  Sum_probs=71.8

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----------------------C-CC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----------------------P-IP   59 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~-~~   59 (108)
                      ...||+.|+|||.+....++.++||||+|+++|++++|..||.+..........                      . ..
T Consensus       258 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~  337 (429)
T 3kvw_A          258 TYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKG  337 (429)
T ss_dssp             SSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTS
T ss_pred             ccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCC
Confidence            457899999999999888999999999999999999999999765422111100                      0 00


Q ss_pred             CCc--------------------------CC--------CCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHHH
Q 041728           60 LDE--------------------------ML--------DPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLASF  103 (108)
Q Consensus        60 ~~~--------------------------~~--------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~~  103 (108)
                      ...                          ..        .+......+.+|+.+||..||.+||++.+++.+.++...
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~  415 (429)
T 3kvw_A          338 YPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR  415 (429)
T ss_dssp             CBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred             CcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence            000                          00        001123568899999999999999999999777766543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.75  E-value=1e-18  Score=101.21  Aligned_cols=100  Identities=11%  Similarity=-0.012  Sum_probs=74.4

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCC---CCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLD---PRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~   79 (108)
                      ...||+.|+|||.+. +.++.++|+||+|++++++++|..||.....................   ...+ ..+.+++..
T Consensus       167 ~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~  244 (277)
T 3f3z_A          167 TKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVS-PQAESLIRR  244 (277)
T ss_dssp             CCCSCTTTCCHHHHT-TCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSC-HHHHHHHHH
T ss_pred             ccCCCCCccChHHhc-ccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCC-HHHHHHHHH
Confidence            356899999999876 45888999999999999999999999876544333322211111111   1223 679999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRLASFL  104 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l~~~~  104 (108)
                      ||..+|.+||++.+++.+.++...+
T Consensus       245 ~l~~dp~~R~s~~~~l~h~~~~~~~  269 (277)
T 3f3z_A          245 LLTKSPKQRITSLQALEHEWFEKQL  269 (277)
T ss_dssp             HTCSSTTTSCCHHHHTTSHHHHHHH
T ss_pred             HccCChhhCcCHHHHhcCHHHhccc
Confidence            9999999999999997777776644

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.75  E-value=6.1e-19  Score=109.04  Aligned_cols=99  Identities=14%  Similarity=0.073  Sum_probs=74.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCC--CCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDP--RLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~c~   81 (108)
                      ..||+.|+|||.+. +.++.++||||+|+++|++++|..||.+.........+.........+  ...+..+.+++.+||
T Consensus       188 ~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L  266 (484)
T 3nyv_A          188 KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML  266 (484)
T ss_dssp             HTTGGGTCCHHHHH-TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHT
T ss_pred             CCCCccccCceeec-CCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHC
Confidence            46899999999886 468899999999999999999999998766544333222211111111  112367999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRLASF  103 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l~~~  103 (108)
                      ..+|.+||++.+++.+.++...
T Consensus       267 ~~dp~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          267 TYVPSMRISARDALDHEWIQTY  288 (484)
T ss_dssp             CSSGGGSCCHHHHHTSHHHHHH
T ss_pred             CCChhHCcCHHHHhhChhhccc
Confidence            9999999999999777777653

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.75  E-value=8e-19  Score=107.67  Aligned_cols=96  Identities=13%  Similarity=0.020  Sum_probs=74.0

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+||+.|+|||.+....++.++|+||+|+++|++++|..||.+.........+......  .+...+..+.+++..||.
T Consensus       308 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~  385 (446)
T 4ejn_A          308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLK  385 (446)
T ss_dssp             CSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCTTSCHHHHHHHHHHTC
T ss_pred             cccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCC--CCccCCHHHHHHHHHHcc
Confidence            467999999999998888999999999999999999999999866544333322111111  122234779999999999


Q ss_pred             CCCCCCC-----CHhhHHHHHHH
Q 041728           83 GNPESRL-----IITLTDGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp-----~~~~l~~l~~l  100 (108)
                      .||.+||     ++++++.+.++
T Consensus       386 ~dP~~R~~~~~~t~~ell~hp~f  408 (446)
T 4ejn_A          386 KDPKQRLGGGSEDAKEIMQHRFF  408 (446)
T ss_dssp             SSTTTSTTCSTTTHHHHHTSGGG
T ss_pred             cCHHHhCCCCCCCHHHHHhCccc
Confidence            9999999     89988665554

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.75  E-value=1.5e-19  Score=109.17  Aligned_cols=98  Identities=15%  Similarity=0.061  Sum_probs=69.9

Q ss_pred             ccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CCCC-----------------
Q 041728            3 DILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PIPL-----------------   60 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----------------   60 (108)
                      ..+||+.|+|||.+.+ ..++.++||||+|++++++++|..||.+.........+    ....                 
T Consensus       189 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~  268 (388)
T 3oz6_A          189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIE  268 (388)
T ss_dssp             -CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHH
T ss_pred             CCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHH
Confidence            3579999999999876 56889999999999999999999999765433221110    0000                 


Q ss_pred             ------------CcC------------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           61 ------------DEM------------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        61 ------------~~~------------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                                  ...            ..+...+..+.+++.+||..||.+||++++++.+.++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~  332 (388)
T 3oz6_A          269 SLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFV  332 (388)
T ss_dssp             HHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTT
T ss_pred             hCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHH
Confidence                        000            0011223679999999999999999999999666554

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.75  E-value=4.9e-19  Score=103.44  Aligned_cols=97  Identities=15%  Similarity=0.156  Sum_probs=65.2

Q ss_pred             cccccceecccccccC------CCcccccchhhhHHHHHHHhC----------CCCCCcchhH----Hhhh-hc-CCCCC
Q 041728            4 ILLEFMNFFEGLAYTI------KITEKYDVYSFGVLVLEVIKG----------KHPRDQMFFL----QFQL-HL-PIPLD   61 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~------~~~~~~di~s~g~~~~~~~~~----------~~~~~~~~~~----~~~~-~~-~~~~~   61 (108)
                      ..||+.|+|||.+...      .++.++|+||+|+++|++++|          ..||......    .... .. .....
T Consensus       177 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~  256 (301)
T 3q4u_A          177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQR  256 (301)
T ss_dssp             CCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC
T ss_pred             cccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCC
Confidence            4799999999998765      455789999999999999999          7777543110    1110 01 11111


Q ss_pred             cCCCCC-C---CchHHHHHHhhhcCCCCCCCCCHhhH-HHHHHH
Q 041728           62 EMLDPR-L---PPDPLFDVAFSCLNGNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        62 ~~~~~~-~---~~~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l  100 (108)
                      ...... .   .+..+.+++..||..||.+||++.++ ..|+.+
T Consensus       257 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          257 PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             CCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            111110 0   11458999999999999999999999 656554

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.75  E-value=1.1e-18  Score=103.82  Aligned_cols=90  Identities=12%  Similarity=0.073  Sum_probs=69.8

Q ss_pred             ccccccceecccccccCCC-cccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKI-TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~-~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ...||+.|+|||.+....+ +.++||||+|+++|++++|..||......      ..  .....+...+..+.+++..||
T Consensus       188 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~--~~~~~~~~~~~~l~~li~~~L  259 (335)
T 3dls_A          188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------VE--AAIHPPYLVSKELMSLVSGLL  259 (335)
T ss_dssp             EECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------TT--TCCCCSSCCCHHHHHHHHHHT
T ss_pred             ccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------Hh--hccCCCcccCHHHHHHHHHHc
Confidence            3568999999999987766 67899999999999999999999764321      11  111122233478999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ..||.+||++.+++.+.++
T Consensus       260 ~~dP~~Rps~~ell~hp~~  278 (335)
T 3dls_A          260 QPVPERRTTLEKLVTDPWV  278 (335)
T ss_dssp             CSSGGGSCCHHHHHHCTTT
T ss_pred             cCChhhCcCHHHHhcCccc
Confidence            9999999999999666554

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.74  E-value=2e-18  Score=106.74  Aligned_cols=98  Identities=12%  Similarity=0.048  Sum_probs=74.8

Q ss_pred             ccccccceecccccccCCC-cccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKI-TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~-~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..+||+.|+|||.+.+..+ +.++|+||+|+++|++++|..||...+.......+.....  ..+...+..+.+++..||
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~Li~~~L  251 (476)
T 2y94_A          174 TSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIF--YTPQYLNPSVISLLKHML  251 (476)
T ss_dssp             CCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCC--CCCTTCCHHHHHHHHHHT
T ss_pred             ccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCc--CCCccCCHHHHHHHHHHc
Confidence            4579999999999987665 5789999999999999999999987654433332222211  112233477999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ..||.+||+++++..+.++..
T Consensus       252 ~~dP~~Rpt~~eil~hp~~~~  272 (476)
T 2y94_A          252 QVDPMKRATIKDIREHEWFKQ  272 (476)
T ss_dssp             CSSTTTSCCHHHHHTCHHHHT
T ss_pred             CCCchhCcCHHHHHhCHHhhh
Confidence            999999999999977777654

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.74  E-value=8.6e-18  Score=98.82  Aligned_cols=95  Identities=15%  Similarity=0.159  Sum_probs=67.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC--CCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP--LDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..|++.|+|||.+....++.++|+|++|+++|++++|..||...............  ......+.++ ..+.+++..||
T Consensus       195 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l  273 (309)
T 2h34_A          195 TVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIP-VAFDAVIARGM  273 (309)
T ss_dssp             --CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCC-THHHHHHHHHT
T ss_pred             cCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCC-HHHHHHHHHhc
Confidence            46889999999998888889999999999999999999999876543222211111  1112223344 77999999999


Q ss_pred             CCCCCCCC-CHhhH-HHHHH
Q 041728           82 NGNPESRL-IITLT-DGLKR   99 (108)
Q Consensus        82 ~~~p~~Rp-~~~~l-~~l~~   99 (108)
                      ..||.+|| +++++ ..+..
T Consensus       274 ~~dP~~Rp~s~~~l~~~l~~  293 (309)
T 2h34_A          274 AKNPEDRYVTCGDLSAAAHA  293 (309)
T ss_dssp             CSSGGGSCSSHHHHHHHHHH
T ss_pred             cCCHHHHHHhHHHHHHHHHH
Confidence            99999999 89988 54544

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.74  E-value=2.2e-19  Score=107.44  Aligned_cols=96  Identities=15%  Similarity=0.052  Sum_probs=71.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+||+.|+|||.+....++.++|+||+|+++|++++|..||.+.+.......+...  ....+...+..+.+++..||.
T Consensus       183 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~lL~  260 (353)
T 3txo_A          183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND--EVVYPTWLHEDATGILKSFMT  260 (353)
T ss_dssp             ---CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTC
T ss_pred             ccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhh
Confidence            467999999999998888899999999999999999999999877654443322221  111233334779999999999


Q ss_pred             CCCCCCCCH------hhHHHHHHH
Q 041728           83 GNPESRLII------TLTDGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp~~------~~l~~l~~l  100 (108)
                      .||.+|+++      .++..+.++
T Consensus       261 ~dP~~R~~~~~~~~~~~il~hp~f  284 (353)
T 3txo_A          261 KNPTMRLGSLTQGGEHAILRHPFF  284 (353)
T ss_dssp             SSGGGSTTSGGGTCTHHHHTSGGG
T ss_pred             hCHHHccCCcccCCHHHHhhCCcc
Confidence            999999998      556544443

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.74  E-value=1.6e-19  Score=108.84  Aligned_cols=46  Identities=11%  Similarity=0.116  Sum_probs=41.8

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF   48 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~   48 (108)
                      ...||+.|+|||.+....++.++||||+|+++|++++|..||.+..
T Consensus       217 ~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  262 (382)
T 2vx3_A          217 QYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN  262 (382)
T ss_dssp             SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            4578999999999998889999999999999999999999998654

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.74  E-value=7.8e-19  Score=106.01  Aligned_cols=98  Identities=17%  Similarity=0.106  Sum_probs=68.2

Q ss_pred             cccccceeccccccc--CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCC--------------------
Q 041728            4 ILLEFMNFFEGLAYT--IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLD--------------------   61 (108)
Q Consensus         4 ~~~~~~~~ape~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------   61 (108)
                      ..||+.|+|||.+..  ..++.++||||+|+++|++++|..||.+...............                    
T Consensus       195 ~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (389)
T 3gni_B          195 SVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSR  274 (389)
T ss_dssp             CTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------------------
T ss_pred             ccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccc
Confidence            468889999999986  5688999999999999999999999976442222111100000                    


Q ss_pred             ------------------------cCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           62 ------------------------EMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        62 ------------------------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                                              ....+...+..+.+++.+||+.||.+||++.+++.+.++.
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~  338 (389)
T 3gni_B          275 SVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK  338 (389)
T ss_dssp             -------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGG
T ss_pred             cccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHH
Confidence                                    0000111236689999999999999999999996555543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.74  E-value=2.5e-19  Score=107.06  Aligned_cols=97  Identities=15%  Similarity=0.122  Sum_probs=68.5

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh---cCCCC-------------------
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH---LPIPL-------------------   60 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------   60 (108)
                      ...||+.|+|||.+....++.++||||+|+++|++++|..||...........   .....                   
T Consensus       218 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  297 (360)
T 3llt_A          218 SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNK  297 (360)
T ss_dssp             SCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEET
T ss_pred             CccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCc
Confidence            45789999999999988899999999999999999999999975442221110   00000                   


Q ss_pred             --CcCCCCC--------------------CCchHHHHHHhhhcCCCCCCCCCHhhHHHHHH
Q 041728           61 --DEMLDPR--------------------LPPDPLFDVAFSCLNGNPESRLIITLTDGLKR   99 (108)
Q Consensus        61 --~~~~~~~--------------------~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~   99 (108)
                        .....+.                    .....+.+++..||+.||.+||++++++.+.+
T Consensus       298 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~  358 (360)
T 3llt_A          298 DELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKF  358 (360)
T ss_dssp             TTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGG
T ss_pred             ccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcc
Confidence              0000000                    01144779999999999999999999865443

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.74  E-value=4.8e-18  Score=100.49  Aligned_cols=95  Identities=19%  Similarity=0.162  Sum_probs=55.4

Q ss_pred             cccccceeccccc---ccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLA---YTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~---~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ..||+.|+|||.+   ....++.++||||+|+++|++++|..||...........    ......+......+.+++..|
T Consensus       210 ~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~  285 (337)
T 3ll6_A          210 RNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNG----KYSIPPHDTQYTVFHSLIRAM  285 (337)
T ss_dssp             --------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------------CCCCTTCCSSGGGHHHHHHH
T ss_pred             ccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcC----cccCCcccccchHHHHHHHHH
Confidence            4588999999998   456678899999999999999999999975543222111    111111222236689999999


Q ss_pred             cCCCCCCCCCHhhH-HHHHHHHH
Q 041728           81 LNGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      |..||.+||++.++ ..+..+..
T Consensus       286 l~~~p~~Rps~~e~l~~l~~~~~  308 (337)
T 3ll6_A          286 LQVNPEERLSIAEVVHQLQEIAA  308 (337)
T ss_dssp             SCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccCChhhCcCHHHHHHHHHHHHh
Confidence            99999999999999 66666654

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.74  E-value=5.7e-19  Score=105.19  Aligned_cols=96  Identities=13%  Similarity=0.005  Sum_probs=68.2

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch--hHHhh---h----hcCCCCCcCCCCCCCchHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF--FLQFQ---L----HLPIPLDEMLDPRLPPDPL   73 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~--~~~~~---~----~~~~~~~~~~~~~~~~~~~   73 (108)
                      ...||+.|+|||.+....++.++||||+|+++|++++|..||....  .....   .    ...............+..+
T Consensus       219 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  298 (345)
T 2v62_A          219 GHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEI  298 (345)
T ss_dssp             CSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHH
T ss_pred             ccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHH
Confidence            3468999999999988889999999999999999999999996421  11000   0    0000000111111233789


Q ss_pred             HHHHhhhcCCCCCCCCCHhhH-HHHH
Q 041728           74 FDVAFSCLNGNPESRLIITLT-DGLK   98 (108)
Q Consensus        74 ~~l~~~c~~~~p~~Rp~~~~l-~~l~   98 (108)
                      .+++..||..+|.+||++++| ..|+
T Consensus       299 ~~li~~~l~~dp~~Rps~~~l~~~L~  324 (345)
T 2v62_A          299 AQFLVCAHSLAYDEKPNYQALKKILN  324 (345)
T ss_dssp             HHHHHHHHTCCTTCCCCHHHHHHHHC
T ss_pred             HHHHHHHhhcCcccCCCHHHHHHHHh
Confidence            999999999999999999999 4443

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.74  E-value=5.1e-18  Score=100.32  Aligned_cols=100  Identities=12%  Similarity=0.025  Sum_probs=56.5

Q ss_pred             cccccceeccccc----ccCCCcccccchhhhHHHHHHHhCCCCCCcchhH-HhhhhcCCCCCcCCC---CCCCchHHHH
Q 041728            4 ILLEFMNFFEGLA----YTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL-QFQLHLPIPLDEMLD---PRLPPDPLFD   75 (108)
Q Consensus         4 ~~~~~~~~ape~~----~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~   75 (108)
                      ..||+.|+|||.+    ....++.++|+||+|+++|++++|..||...... ...............   ....+..+.+
T Consensus       185 ~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  264 (327)
T 3aln_A          185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFIN  264 (327)
T ss_dssp             ---------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHH
T ss_pred             CCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHH
Confidence            3688999999998    3456788999999999999999999999764322 111111111111111   1122367999


Q ss_pred             HHhhhcCCCCCCCCCHhhHHHHHHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLTDGLKRLASF  103 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l~~l~~l~~~  103 (108)
                      ++..||..||.+||++.+++.+.++...
T Consensus       265 li~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          265 FVNLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence            9999999999999999999666666543

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.74  E-value=2.9e-18  Score=101.16  Aligned_cols=101  Identities=15%  Similarity=0.100  Sum_probs=73.7

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH---------------HhhhhcCCCCCcCCCCCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL---------------QFQLHLPIPLDEMLDPRL   68 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~   68 (108)
                      ..+|+.|+|||.+....++.++|+||+|++++++++|..|+......               ......... .....+..
T Consensus       197 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  275 (318)
T 3lxp_A          197 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG-ERLPRPDK  275 (318)
T ss_dssp             CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT-CCCCCCTT
T ss_pred             CCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc-cCCCCCcc
Confidence            34777899999998888889999999999999999999988654211               001111111 11222233


Q ss_pred             CchHHHHHHhhhcCCCCCCCCCHhhH-HHHHHHHHHHh
Q 041728           69 PPDPLFDVAFSCLNGNPESRLIITLT-DGLKRLASFLL  105 (108)
Q Consensus        69 ~~~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l~~~~~  105 (108)
                      .+..+.+++..||..||.+||+++++ ..|+.+.....
T Consensus       276 ~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~  313 (318)
T 3lxp_A          276 CPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ  313 (318)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence            34789999999999999999999999 77777766543

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.74  E-value=9.8e-19  Score=103.58  Aligned_cols=98  Identities=7%  Similarity=-0.084  Sum_probs=71.1

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchh---HHhhhhcCC----CCCcCCCCCCCchHHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF---LQFQLHLPI----PLDEMLDPRLPPDPLFD   75 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~   75 (108)
                      ...||+.|+|||.+.+..++.++|+||+|+++|++++|..||.+...   .........    ......... . .++.+
T Consensus       176 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~-p~~~~  253 (330)
T 2izr_A          176 SLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCEN-F-PEMAT  253 (330)
T ss_dssp             CCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTT-C-HHHHH
T ss_pred             CcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhcc-C-hHHHH
Confidence            46799999999999988899999999999999999999999976421   111111100    001111111 2 27999


Q ss_pred             HHhhhcCCCCCCCCCHhhH-HHHHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      ++..||..+|.+||++++| ..+..+..
T Consensus       254 li~~~l~~~p~~RP~~~~l~~~l~~~~~  281 (330)
T 2izr_A          254 YLRYVRRLDFFEKPDYDYLRKLFTDLFD  281 (330)
T ss_dssp             HHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence            9999999999999999999 65655544

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.74  E-value=1.2e-18  Score=104.13  Aligned_cols=96  Identities=15%  Similarity=0.049  Sum_probs=73.4

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+||+.|+|||.+....++.++|+||+|+++|++++|..||.+.........+......  .+...+..+.+++.+||+
T Consensus       197 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~--~p~~~~~~~~~li~~lL~  274 (350)
T 1rdq_E          197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQ  274 (350)
T ss_dssp             CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCTTCCHHHHHHHHHHSC
T ss_pred             cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHHhh
Confidence            467999999999998888999999999999999999999999876654443322222111  122234789999999999


Q ss_pred             CCCCCCCC-----HhhHHHHHHH
Q 041728           83 GNPESRLI-----ITLTDGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp~-----~~~l~~l~~l  100 (108)
                      .||.+||+     ++++..+.++
T Consensus       275 ~dp~~R~~~~~~~~~ei~~h~~f  297 (350)
T 1rdq_E          275 VDLTKRFGNLKNGVNDIKNHKWF  297 (350)
T ss_dssp             SCTTTCTTSSTTTTHHHHTSGGG
T ss_pred             cCHHhccCCccCCHHHHHhCcCc
Confidence            99999998     7777554443

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.74  E-value=2.3e-18  Score=100.20  Aligned_cols=96  Identities=17%  Similarity=0.102  Sum_probs=69.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh--cCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH--LPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ...||+.|+|||.+. ..++.++|+||+|++++++++|..||.+.........  ............. +..+.+++..|
T Consensus       185 ~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~  262 (285)
T 3is5_A          185 NAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPL-TPQAVDLLKQM  262 (285)
T ss_dssp             --CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCC-CHHHHHHHHHH
T ss_pred             CcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcC-CHHHHHHHHHH
Confidence            356899999999875 5678899999999999999999999986654333221  1111111111222 37799999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      |..||.+||++.+++.+.++
T Consensus       263 L~~dP~~Rps~~e~l~hp~f  282 (285)
T 3is5_A          263 LTKDPERRPSAAQVLHHEWF  282 (285)
T ss_dssp             TCSCTTTSCCHHHHHTSGGG
T ss_pred             ccCChhhCcCHHHHhcCHHh
Confidence            99999999999999655443

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.74  E-value=1.5e-18  Score=102.61  Aligned_cols=96  Identities=14%  Similarity=0.054  Sum_probs=73.1

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+||+.|+|||.+....++.++|+||+|+++|++++|..||.+.+.......+.....  ..+...+.++.+++.+|+.
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~lL~  239 (318)
T 1fot_A          162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL--RFPPFFNEDVKDLLSRLIT  239 (318)
T ss_dssp             CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTC
T ss_pred             cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHhc
Confidence            46799999999999888899999999999999999999999987654443332211111  1122234789999999999


Q ss_pred             CCCCCCC-----CHhhHHHHHHH
Q 041728           83 GNPESRL-----IITLTDGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp-----~~~~l~~l~~l  100 (108)
                      .||.+|+     +++++..+.++
T Consensus       240 ~dp~~R~~~~~~~~~~i~~hp~f  262 (318)
T 1fot_A          240 RDLSQRLGNLQNGTEDVKNHPWF  262 (318)
T ss_dssp             SCTTTCTTSSTTTTHHHHTSGGG
T ss_pred             cCHHHcCCCcCCCHHHHhcCccc
Confidence            9999999     77777555444

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.74  E-value=3.3e-18  Score=100.95  Aligned_cols=99  Identities=24%  Similarity=0.274  Sum_probs=69.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH------Hhhh--hcCCCCCcCCCC----CCC--
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL------QFQL--HLPIPLDEMLDP----RLP--   69 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~----~~~--   69 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|..||......      .+..  ...........+    ...  
T Consensus       201 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (321)
T 2qkw_B          201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPE  280 (321)
T ss_dssp             CEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHH
T ss_pred             cCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHH
Confidence            45899999999998888999999999999999999999998643211      1100  111111111111    112  


Q ss_pred             -chHHHHHHhhhcCCCCCCCCCHhhH-HHHHHHHH
Q 041728           70 -PDPLFDVAFSCLNGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        70 -~~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                       ...+.+++..||..||.+||++.++ ..++.+..
T Consensus       281 ~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          281 SLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence             1458899999999999999999999 66665543

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.74  E-value=1.4e-18  Score=107.65  Aligned_cols=99  Identities=12%  Similarity=0.020  Sum_probs=72.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH---Hhhhh----cCCCCCcCCCCCCCchHHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL---QFQLH----LPIPLDEMLDPRLPPDPLFD   75 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~   75 (108)
                      ...||+.|++||.+....++.++|||++|+++|++++|..||.+....   .....    ............++ .++.+
T Consensus       172 ~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p-~~l~~  250 (483)
T 3sv0_A          172 NLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYP-TEFAS  250 (483)
T ss_dssp             CCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSC-HHHHH
T ss_pred             ccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCc-HHHHH
Confidence            467999999999999888999999999999999999999999864321   11100    00000111112233 77999


Q ss_pred             HHhhhcCCCCCCCCCHhhH-HHHHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      ++..||..+|.+||++.+| ..|+.+..
T Consensus       251 li~~cl~~dP~~RPs~~el~~~L~~l~~  278 (483)
T 3sv0_A          251 YFHYCRSLRFDDKPDYSYLKRLFRDLFI  278 (483)
T ss_dssp             HHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            9999999999999999999 55665543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.74  E-value=1.4e-18  Score=102.91  Aligned_cols=103  Identities=11%  Similarity=0.082  Sum_probs=67.5

Q ss_pred             ccccccceeccccccc-------CCCcccccchhhhHHHHHHHhCCCCCCcchhH------------------HhhhhcC
Q 041728            3 DILLEFMNFFEGLAYT-------IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL------------------QFQLHLP   57 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-------~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~------------------~~~~~~~   57 (108)
                      ...||+.|+|||.+..       ..++.++||||+|+++|++++|..|+......                  .......
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
T 3g2f_A          187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVS  266 (336)
T ss_dssp             CTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHT
T ss_pred             cCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhc
Confidence            3469999999999875       34567899999999999999986654321100                  0000000


Q ss_pred             -CCCCcCCCCCCC-----chHHHHHHhhhcCCCCCCCCCHhhH-HHHHHHHHHHh
Q 041728           58 -IPLDEMLDPRLP-----PDPLFDVAFSCLNGNPESRLIITLT-DGLKRLASFLL  105 (108)
Q Consensus        58 -~~~~~~~~~~~~-----~~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l~~~~~  105 (108)
                       ............     +..+.+++..||..||.+||++.++ ..|+.+.....
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~  321 (336)
T 3g2f_A          267 REKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE  321 (336)
T ss_dssp             TSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred             ccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence             111111111111     1359999999999999999999999 77777765433

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.73  E-value=1.6e-18  Score=110.83  Aligned_cols=95  Identities=13%  Similarity=0.033  Sum_probs=73.8

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      .++||+.|+|||.+....++.++|+||+|+++|++++|..||.+.+.......+......  .|...+.++.+++..||.
T Consensus       501 ~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~  578 (674)
T 3pfq_A          501 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA--YPKSMSKEAVAICKGLMT  578 (674)
T ss_dssp             CCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCC--CCTTSCHHHHHHHHHHSC
T ss_pred             cccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC--CCccCCHHHHHHHHHHcc
Confidence            467999999999998889999999999999999999999999877655444433222221  222334789999999999


Q ss_pred             CCCCCCCCH-----hhHHHHHH
Q 041728           83 GNPESRLII-----TLTDGLKR   99 (108)
Q Consensus        83 ~~p~~Rp~~-----~~l~~l~~   99 (108)
                      .||.+|+++     ++|..+.+
T Consensus       579 ~dP~~R~~~~~~~~~ei~~h~f  600 (674)
T 3pfq_A          579 KHPGKRLGCGPEGERDIKEHAF  600 (674)
T ss_dssp             SSSTTCTTCSTTHHHHHHSSGG
T ss_pred             CCHHHCCCCCCCcHHHHhcCcc
Confidence            999999997     56644333

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.73  E-value=1.1e-18  Score=102.02  Aligned_cols=97  Identities=15%  Similarity=0.146  Sum_probs=69.7

Q ss_pred             cccccceecccccc-----cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcC-CCCCcCCCCCCCchHHHHHH
Q 041728            4 ILLEFMNFFEGLAY-----TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP-IPLDEMLDPRLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~~~~~~ape~~~-----~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~   77 (108)
                      ..|++.|+|||.+.     ...++.++|+|++|+++|++++|..|+............. ........+...+..+.+++
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  256 (302)
T 2j7t_A          177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFL  256 (302)
T ss_dssp             --CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHH
T ss_pred             ccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHH
Confidence            56899999999873     5667889999999999999999999998765443332211 11111222222336799999


Q ss_pred             hhhcCCCCCCCCCHhhHHHHHHH
Q 041728           78 FSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ..||..||.+||++.+++.+.++
T Consensus       257 ~~~l~~dp~~Rps~~~ll~h~~~  279 (302)
T 2j7t_A          257 KIALDKNPETRPSAAQLLEHPFV  279 (302)
T ss_dssp             HHHSCSCTTTSCCHHHHTTSTTT
T ss_pred             HHHcccChhhCCCHHHHhcChHH
Confidence            99999999999999998554443

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.73  E-value=1e-18  Score=103.40  Aligned_cols=97  Identities=15%  Similarity=0.099  Sum_probs=69.3

Q ss_pred             ccccccceecccccccCCC-cccccchhhhHHHHHHHhCCCCCCcchhHH--hhhhcCCCCCcCCCCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKI-TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ--FQLHLPIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~-~~~~di~s~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ...||+.|+|||.+....+ +.++||||+|+++|++++|..||.......  ................+ +..+.+++.+
T Consensus       166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~  244 (323)
T 3tki_A          166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLALLHK  244 (323)
T ss_dssp             SCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGS-CHHHHHHHHH
T ss_pred             CCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccC-CHHHHHHHHH
Confidence            4578999999999987665 678999999999999999999997543211  11111111111111222 3678999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ||..||.+||++.+++++.++
T Consensus       245 ~L~~dP~~R~t~~eil~h~~~  265 (323)
T 3tki_A          245 ILVENPSARITIPDIKKDRWY  265 (323)
T ss_dssp             HSCSSTTTSCCHHHHTTCTTT
T ss_pred             HccCChhhCcCHHHHhhChhh
Confidence            999999999999999655544

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.73  E-value=4.6e-18  Score=99.22  Aligned_cols=97  Identities=14%  Similarity=0.077  Sum_probs=74.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|+|||.+....++.++|+|++|++++++++|..||..................  .+...+..+.+++..||..
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~  252 (294)
T 2rku_A          175 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINPVAASLIQKMLQT  252 (294)
T ss_dssp             CCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC--CCTTSCHHHHHHHHHHTCS
T ss_pred             ccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCC--CccccCHHHHHHHHHHccc
Confidence            45888999999998888889999999999999999999999876544333322121111  1222337799999999999


Q ss_pred             CCCCCCCHhhHHHHHHHHH
Q 041728           84 NPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ||.+||++++++.+.++..
T Consensus       253 ~p~~Rps~~~ll~~~~~~~  271 (294)
T 2rku_A          253 DPTARPTINELLNDEFFTS  271 (294)
T ss_dssp             SGGGSCCGGGGGGSHHHHT
T ss_pred             ChhhCcCHHHHhhChheec
Confidence            9999999999976666643

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.73  E-value=1.7e-18  Score=103.63  Aligned_cols=94  Identities=13%  Similarity=0.045  Sum_probs=71.0

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+||+.|+|||.+....++.++|+||+|+++|++++|..||.+.+.......+......  .|...+.++.+++.+||.
T Consensus       180 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~  257 (353)
T 2i0e_A          180 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA--YPKSMSKEAVAICKGLMT  257 (353)
T ss_dssp             CCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCTTSCHHHHHHHHHHTC
T ss_pred             cccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC--CCCCCCHHHHHHHHHHhh
Confidence            467999999999998888999999999999999999999999876544433322221111  122234789999999999


Q ss_pred             CCCCCCCCH-----hhHHHHH
Q 041728           83 GNPESRLII-----TLTDGLK   98 (108)
Q Consensus        83 ~~p~~Rp~~-----~~l~~l~   98 (108)
                      .||.+||++     .++..+.
T Consensus       258 ~dP~~R~~~~~~~~~~i~~h~  278 (353)
T 2i0e_A          258 KHPGKRLGCGPEGERDIKEHA  278 (353)
T ss_dssp             SCTTSCTTCSTTHHHHHHTSG
T ss_pred             cCHHHcCCCCCCCHHHHhcCc
Confidence            999999964     5554433

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.73  E-value=2.1e-18  Score=102.16  Aligned_cols=96  Identities=16%  Similarity=0.058  Sum_probs=71.9

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||...........+...... ..+.+ +..+.+++.+||.
T Consensus       180 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~-~p~~~-~~~~~~li~~~L~  257 (327)
T 3a62_A          180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN-LPPYL-TQEARDLLKKLLK  257 (327)
T ss_dssp             TTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC-CCTTS-CHHHHHHHHHHSC
T ss_pred             ccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC-CCCCC-CHHHHHHHHHHHh
Confidence            357899999999998888899999999999999999999999876544333322111111 11223 3779999999999


Q ss_pred             CCCCCCC-----CHhhHHHHHHH
Q 041728           83 GNPESRL-----IITLTDGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp-----~~~~l~~l~~l  100 (108)
                      .||.+||     ++.+++.+.++
T Consensus       258 ~dp~~R~~~~~~~~~e~l~hp~f  280 (327)
T 3a62_A          258 RNAASRLGAGPGDAGEVQAHPFF  280 (327)
T ss_dssp             SCGGGSTTSSTTTHHHHHHSGGG
T ss_pred             cCHhhccCCCCCCHHHHHcCCcc
Confidence            9999999     66677555444

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.73  E-value=6.1e-19  Score=104.43  Aligned_cols=97  Identities=14%  Similarity=0.111  Sum_probs=56.1

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchh-------HHhhhhcCCCCCcCCC---CCCCchH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF-------LQFQLHLPIPLDEMLD---PRLPPDP   72 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~---~~~~~~~   72 (108)
                      ..+||+.|+|||.+....++.++|+||+|+++|++++|..||.....       ................   +.+ +.+
T Consensus       168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-s~~  246 (325)
T 3kn6_A          168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNV-SQE  246 (325)
T ss_dssp             ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTS-CHH
T ss_pred             ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCC-CHH
Confidence            34678999999999888899999999999999999999999975432       1112222222111111   122 367


Q ss_pred             HHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           73 LFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        73 ~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      +.+++..||..||.+||++++++.+.++
T Consensus       247 ~~~li~~~L~~dP~~Rpt~~ell~h~w~  274 (325)
T 3kn6_A          247 AKDLIQGLLTVDPNKRLKMSGLRYNEWL  274 (325)
T ss_dssp             HHHHHHHHHCCCTTTCCCTTTSTTCGGG
T ss_pred             HHHHHHHHCCCChhHCCCHHHHhcChhh
Confidence            9999999999999999999998655544

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.73  E-value=2.7e-18  Score=105.12  Aligned_cols=97  Identities=15%  Similarity=0.036  Sum_probs=66.8

Q ss_pred             ccccccceeccccccc---CCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCC-CCchHHHHHH
Q 041728            3 DILLEFMNFFEGLAYT---IKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPR-LPPDPLFDVA   77 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~---~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~   77 (108)
                      ...||+.|+|||.+..   ..++.++||||+|+++|++++ |..||.....................+. .....+.+++
T Consensus       185 ~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  264 (432)
T 3p23_A          185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELI  264 (432)
T ss_dssp             -CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHH
T ss_pred             ccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHH
Confidence            3569999999999873   456778999999999999999 8888865433322222222112222111 1124478999


Q ss_pred             hhhcCCCCCCCCCHhhHHHHHH
Q 041728           78 FSCLNGNPESRLIITLTDGLKR   99 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~~l~~   99 (108)
                      ..||..||.+||++.+++.+.+
T Consensus       265 ~~~L~~dP~~Rps~~evl~hp~  286 (432)
T 3p23_A          265 EKMIAMDPQKRPSAKHVLKHPF  286 (432)
T ss_dssp             HHHSCSSGGGSCCHHHHHTSTT
T ss_pred             HHHHhCCHhhCCCHHHHHhCcc
Confidence            9999999999999999864433

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.73  E-value=4e-18  Score=100.25  Aligned_cols=99  Identities=10%  Similarity=-0.006  Sum_probs=66.6

Q ss_pred             cccccceecccccc-----cCCCcccccchhhhHHHHHHHhCCCCCCcch-hHHhhhhc-CCCCCcCCCCCCCchHHHHH
Q 041728            4 ILLEFMNFFEGLAY-----TIKITEKYDVYSFGVLVLEVIKGKHPRDQMF-FLQFQLHL-PIPLDEMLDPRLPPDPLFDV   76 (108)
Q Consensus         4 ~~~~~~~~ape~~~-----~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~l   76 (108)
                      ..|++.|+|||.+.     ...++.++|+|++|+++|++++|..||.... ........ .............+..+.++
T Consensus       184 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  263 (318)
T 2dyl_A          184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSF  263 (318)
T ss_dssp             ---CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHH
T ss_pred             cCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHH
Confidence            46889999999984     4567889999999999999999999997532 11111111 11111111111223779999


Q ss_pred             HhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           77 AFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      +..||..||.+||++.+++.+.++..
T Consensus       264 i~~~l~~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          264 VKDCLTKDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             HHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred             HHHHccCChhHCcCHHHHhhCHHHHh
Confidence            99999999999999999966666554

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.73  E-value=1e-18  Score=105.08  Aligned_cols=100  Identities=14%  Similarity=0.064  Sum_probs=69.2

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCC----------------------
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPL----------------------   60 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------   60 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||.+..............                      
T Consensus       185 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (371)
T 2xrw_A          185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR  264 (371)
T ss_dssp             -----CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSS
T ss_pred             CceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhC
Confidence            3578999999999988889999999999999999999999998655332211110000                      


Q ss_pred             C------------cCCCCCCC------chHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           61 D------------EMLDPRLP------PDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        61 ~------------~~~~~~~~------~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      .            ....+...      +..+.+++.+||..||.+||++++++.+.++..
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  324 (371)
T 2xrw_A          265 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  324 (371)
T ss_dssp             CCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             ccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence            0            00001000      245889999999999999999999987777753

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.73  E-value=3.1e-18  Score=101.70  Aligned_cols=97  Identities=14%  Similarity=0.077  Sum_probs=73.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|+|||.+....++.++|+|++|+++|++++|..||..................  .+...+..+.+++..||..
T Consensus       201 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~  278 (335)
T 2owb_A          201 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINPVAASLIQKMLQT  278 (335)
T ss_dssp             CCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--CCTTSCHHHHHHHHHHTCS
T ss_pred             cCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCC--CCccCCHHHHHHHHHHccC
Confidence            46889999999998888889999999999999999999999865543332221111111  1222337799999999999


Q ss_pred             CCCCCCCHhhHHHHHHHHH
Q 041728           84 NPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ||.+||++.+++.+.++..
T Consensus       279 dp~~Rps~~ell~~~~~~~  297 (335)
T 2owb_A          279 DPTARPTINELLNDEFFTS  297 (335)
T ss_dssp             SGGGSCCGGGGGGSHHHHT
T ss_pred             ChhHCcCHHHHhcCccccC
Confidence            9999999999976666654

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.73  E-value=2.5e-18  Score=101.11  Aligned_cols=91  Identities=21%  Similarity=0.228  Sum_probs=66.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc--CCCCC-cCCCCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL--PIPLD-EMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~l~~~c   80 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|..||.+..........  ..... ......++ ..+.+++.+|
T Consensus       179 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~  257 (311)
T 3ork_A          179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS-ADLDAVVLKA  257 (311)
T ss_dssp             ---CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCC-HHHHHHHHHH
T ss_pred             cCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCC-HHHHHHHHHH
Confidence            45899999999998888999999999999999999999999876544433211  11111 11112233 7799999999


Q ss_pred             cCCCCCCCCCHhhHH
Q 041728           81 LNGNPESRLIITLTD   95 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~   95 (108)
                      |..||.+||+..+++
T Consensus       258 l~~dP~~R~~~~~~l  272 (311)
T 3ork_A          258 LAKNPENRYQTAAEM  272 (311)
T ss_dssp             TCSSGGGSCSSHHHH
T ss_pred             HhcCHhhChhhHHHH
Confidence            999999999877663

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.73  E-value=1.6e-18  Score=100.39  Aligned_cols=95  Identities=16%  Similarity=0.120  Sum_probs=52.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..|++.|+|||.+....++.++|+|++|++++++++|..||...............  ....+...+..+.+++..||..
T Consensus       172 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~  249 (278)
T 3cok_A          172 LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA--DYEMPSFLSIEAKDLIHQLLRR  249 (278)
T ss_dssp             --------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSS--CCCCCTTSCHHHHHHHHHHSCS
T ss_pred             ccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhc--ccCCccccCHHHHHHHHHHccc
Confidence            45889999999998888889999999999999999999999765422222211111  1112233347799999999999


Q ss_pred             CCCCCCCHhhHHHHHHH
Q 041728           84 NPESRLIITLTDGLKRL  100 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l~~l  100 (108)
                      ||.+||++++++.+.++
T Consensus       250 dp~~Rps~~~~l~h~~~  266 (278)
T 3cok_A          250 NPADRLSLSSVLDHPFM  266 (278)
T ss_dssp             SGGGSCCHHHHTTSTTT
T ss_pred             CHhhCCCHHHHhcCccc
Confidence            99999999998655444

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.73  E-value=3.1e-18  Score=100.83  Aligned_cols=93  Identities=19%  Similarity=0.034  Sum_probs=67.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..||+.|+|||.+.+ .++.++||||+|+++|++++|..++...........  ........... +..+.+++..||..
T Consensus       216 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~l~~li~~~L~~  291 (311)
T 3p1a_A          216 QEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ--GYLPPEFTAGL-SSELRSVLVMMLEP  291 (311)
T ss_dssp             CCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTT--TCCCHHHHTTS-CHHHHHHHHHHSCS
T ss_pred             cCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhc--cCCCcccccCC-CHHHHHHHHHHcCC
Confidence            468999999998874 788999999999999999998665554432222111  11111111223 37799999999999


Q ss_pred             CCCCCCCHhhHHHHHHH
Q 041728           84 NPESRLIITLTDGLKRL  100 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l~~l  100 (108)
                      ||.+||++.+++.+.++
T Consensus       292 dP~~Rpt~~ell~hp~~  308 (311)
T 3p1a_A          292 DPKLRATAEALLALPVL  308 (311)
T ss_dssp             STTTSCCHHHHHTSGGG
T ss_pred             ChhhCcCHHHHHhCccc
Confidence            99999999999655544

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.73  E-value=9.9e-19  Score=103.60  Aligned_cols=97  Identities=12%  Similarity=0.071  Sum_probs=66.7

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CCCCCc------------CCCC
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PIPLDE------------MLDP   66 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~------------~~~~   66 (108)
                      ..||+.|+|||.+... .++.++||||+|+++|++++|..||.+..........    ......            ...+
T Consensus       197 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (329)
T 3gbz_A          197 EIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFP  276 (329)
T ss_dssp             ---CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCC
T ss_pred             CcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhh
Confidence            4578999999998764 4789999999999999999999999765433222110    000000            0000


Q ss_pred             ------------CCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           67 ------------RLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        67 ------------~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                                  ...+.++.+++.+||..||.+||++.+++.+.++
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f  322 (329)
T 3gbz_A          277 KFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF  322 (329)
T ss_dssp             CCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred             hhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCccc
Confidence                        0022668899999999999999999999665554

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.73  E-value=2.7e-18  Score=106.72  Aligned_cols=98  Identities=15%  Similarity=0.015  Sum_probs=74.7

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCC---CCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEML---DPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~   79 (108)
                      ...||+.|+|||.+. ..++.++||||+|+++|++++|..||.+.........+........   .+.++ ..+.+++..
T Consensus       207 ~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~  284 (504)
T 3q5i_A          207 DRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNIS-DEAKELIKL  284 (504)
T ss_dssp             CCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSC-HHHHHHHHH
T ss_pred             cccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCC-HHHHHHHHH
Confidence            356999999999876 5688999999999999999999999987665444332222111111   12233 779999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ||..||.+||++.+++.+.++..
T Consensus       285 ~L~~dp~~R~t~~e~l~h~~~~~  307 (504)
T 3q5i_A          285 MLTYDYNKRCTAEEALNSRWIKK  307 (504)
T ss_dssp             HTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             HcCCChhHCCCHHHHhcCHhhhh
Confidence            99999999999999977777754

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.73  E-value=1.4e-18  Score=101.24  Aligned_cols=96  Identities=13%  Similarity=0.113  Sum_probs=66.8

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CCC----C------------Cc
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PIP----L------------DE   62 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~------------~~   62 (108)
                      ..||+.|+|||.+.. ..++.++|+||+|+++|++++|..||.+..........    ...    .            ..
T Consensus       160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (288)
T 1ob3_A          160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT  239 (288)
T ss_dssp             --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCC
T ss_pred             ccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccc
Confidence            468999999999875 45789999999999999999999999765432211100    000    0            00


Q ss_pred             --------CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           63 --------MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        63 --------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                              .....+ +..+.+++.+||..||.+||++.+++.+.++
T Consensus       240 ~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f  284 (288)
T 1ob3_A          240 VYEPLPWESFLKGL-DESGIDLLSKMLKLDPNQRITAKQALEHAYF  284 (288)
T ss_dssp             CCCCCCGGGTCCSC-CHHHHHHHHHHTCSSTTTSCCHHHHHTSGGG
T ss_pred             cccCccHHHHhhhc-CHHHHHHHHHHcCCCcccCCCHHHHhcCcch
Confidence                    000112 3668899999999999999999998655443

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.73  E-value=5.3e-18  Score=102.17  Aligned_cols=88  Identities=11%  Similarity=0.046  Sum_probs=68.8

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+||+.|+|||.+....++.++|+||+|+++|++++|..||.+.+.......+...... ..+.++ ..+.+++.+||+
T Consensus       198 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~-~~~~~li~~lL~  275 (373)
T 2r5t_A          198 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQ-LKPNIT-NSARHLLEGLLQ  275 (373)
T ss_dssp             SBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCC-CCSSSC-HHHHHHHHHHTC
T ss_pred             cccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-CCCCCC-HHHHHHHHHHcc
Confidence            567999999999998888999999999999999999999999876544433322221111 122333 779999999999


Q ss_pred             CCCCCCCCHh
Q 041728           83 GNPESRLIIT   92 (108)
Q Consensus        83 ~~p~~Rp~~~   92 (108)
                      .||.+|+++.
T Consensus       276 ~dp~~R~~~~  285 (373)
T 2r5t_A          276 KDRTKRLGAK  285 (373)
T ss_dssp             SSGGGSTTTT
T ss_pred             cCHHhCCCCC
Confidence            9999999974

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.73  E-value=3.8e-18  Score=101.39  Aligned_cols=100  Identities=14%  Similarity=0.060  Sum_probs=56.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh----hcCCCCCcCCCC--CCCchHHHHHH
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL----HLPIPLDEMLDP--RLPPDPLFDVA   77 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~l~   77 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|..||..........    ...........+  ...+..+.+++
T Consensus       189 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  268 (336)
T 3fhr_A          189 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLI  268 (336)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHH
T ss_pred             CCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHH
Confidence            467899999999988888899999999999999999999997554222111    011111111111  12237799999


Q ss_pred             hhhcCCCCCCCCCHhhHHHHHHHHHH
Q 041728           78 FSCLNGNPESRLIITLTDGLKRLASF  103 (108)
Q Consensus        78 ~~c~~~~p~~Rp~~~~l~~l~~l~~~  103 (108)
                      ..||..||.+||++.+++.+.++...
T Consensus       269 ~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          269 RLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             HHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             HHHCCCChhHCcCHHHHhcCcccccc
Confidence            99999999999999999877777653

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.72  E-value=6e-18  Score=100.20  Aligned_cols=101  Identities=17%  Similarity=0.156  Sum_probs=66.6

Q ss_pred             ccccccceecccccccCCCccc------ccchhhhHHHHHHHhC----------CCCCCcchhH-----Hhhhhc-CCCC
Q 041728            3 DILLEFMNFFEGLAYTIKITEK------YDVYSFGVLVLEVIKG----------KHPRDQMFFL-----QFQLHL-PIPL   60 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~------~di~s~g~~~~~~~~~----------~~~~~~~~~~-----~~~~~~-~~~~   60 (108)
                      ...||+.|+|||.+........      +||||+|+++|++++|          ..||......     ...... ....
T Consensus       205 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  284 (337)
T 3mdy_A          205 TRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKL  284 (337)
T ss_dssp             SSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC
T ss_pred             CCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhcc
Confidence            3579999999999876555443      8999999999999999          5555432110     000001 1111


Q ss_pred             CcCCCCC----CCchHHHHHHhhhcCCCCCCCCCHhhH-HHHHHHHHH
Q 041728           61 DEMLDPR----LPPDPLFDVAFSCLNGNPESRLIITLT-DGLKRLASF  103 (108)
Q Consensus        61 ~~~~~~~----~~~~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l~~~  103 (108)
                      .......    ..+..+.+++..||..||.+||++.++ ..|+.+...
T Consensus       285 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          285 RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence            1111110    111458899999999999999999999 777776553

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.72  E-value=4e-18  Score=99.65  Aligned_cols=95  Identities=20%  Similarity=0.296  Sum_probs=68.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh-hcCCCCC---cCCCCCCCchHHHHHHhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL-HLPIPLD---EMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~l~~~   79 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|..||.+........ .......   ....+.++ ..+.+++.+
T Consensus       172 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~  250 (294)
T 4eqm_A          172 VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIP-QSLSNVILR  250 (294)
T ss_dssp             ---CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSC-HHHHHHHHH
T ss_pred             cccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCC-HHHHHHHHH
Confidence            468999999999988888899999999999999999999998765443322 1111111   11123334 779999999


Q ss_pred             hcCCCCCCCC-CHhhH-HHHHH
Q 041728           80 CLNGNPESRL-IITLT-DGLKR   99 (108)
Q Consensus        80 c~~~~p~~Rp-~~~~l-~~l~~   99 (108)
                      ||..||.+|| +++++ ..+..
T Consensus       251 ~l~~dp~~R~~~~~~l~~~l~~  272 (294)
T 4eqm_A          251 ATEKDKANRYKTIQEMKDDLSS  272 (294)
T ss_dssp             HSCSSGGGSCSSHHHHHHHHHT
T ss_pred             HhcCCHhHccccHHHHHHHHHH
Confidence            9999999998 67777 44443

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.72  E-value=8.6e-18  Score=97.21  Aligned_cols=97  Identities=12%  Similarity=0.045  Sum_probs=67.2

Q ss_pred             cccccceecccccccCCC-cccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKI-TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~-~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..|++.|+|||.+....+ +.++|+|++|++++++++|..||................. . .+...+..+.+++..||.
T Consensus       170 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~-~~~~~~~~l~~li~~~l~  247 (276)
T 2h6d_A          170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVF-Y-IPEYLNRSVATLLMHMLQ  247 (276)
T ss_dssp             -------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-C-CCTTSCHHHHHHHHHHTC
T ss_pred             ccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcc-c-CchhcCHHHHHHHHHHcc
Confidence            457889999999887655 5789999999999999999999976554333222111111 1 122234779999999999


Q ss_pred             CCCCCCCCHhhHHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      .||.+||++.+++.+.++..
T Consensus       248 ~~p~~Rps~~~~l~h~~~~~  267 (276)
T 2h6d_A          248 VDPLKRATIKDIREHEWFKQ  267 (276)
T ss_dssp             SSGGGSCCHHHHHHSHHHHT
T ss_pred             CChhhCCCHHHHHhChhhcc
Confidence            99999999999977777654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.72  E-value=1.2e-18  Score=102.58  Aligned_cols=97  Identities=15%  Similarity=0.101  Sum_probs=68.4

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh----hcCCCCC-----------------
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL----HLPIPLD-----------------   61 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----------------   61 (108)
                      ..||+.|+|||.+.. ..++.++|+||+|+++|++++|..||.+........    .......                 
T Consensus       179 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (311)
T 3niz_A          179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF  258 (311)
T ss_dssp             CCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCC
T ss_pred             CcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhccc
Confidence            468999999999875 567899999999999999999999997543221111    0000000                 


Q ss_pred             cC--------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           62 EM--------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        62 ~~--------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ..        ..+..+ .++.+++.+||..||.+||++++++.+.++.
T Consensus       259 ~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~  305 (311)
T 3niz_A          259 QVFEKKPWSSIIPGFC-QEGIDLLSNMLCFDPNKRISARDAMNHPYFK  305 (311)
T ss_dssp             CCCCCCCHHHHSTTCC-HHHHHHHHHHSCSCTTTSCCHHHHHTSGGGT
T ss_pred             ccccCCcHHHhCcccC-HHHHHHHHHHcCCChhHCCCHHHHhcCcccc
Confidence            00        001122 5688999999999999999999997665543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.72  E-value=1.2e-18  Score=103.07  Aligned_cols=98  Identities=12%  Similarity=0.075  Sum_probs=68.0

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CCC----CCcC-----------
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PIP----LDEM-----------   63 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~-----------   63 (108)
                      ..||+.|+|||.+.+ ..++.++|+||+|+++|++++|..||.+..........    ...    ....           
T Consensus       160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (324)
T 3mtl_A          160 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNY  239 (324)
T ss_dssp             ---CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCC
T ss_pred             ccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccccc
Confidence            467999999999876 56789999999999999999999999765432221100    000    0000           


Q ss_pred             ----------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           64 ----------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        64 ----------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                                ..+.. +..+.+++.+||+.||.+||++++++.+.++..
T Consensus       240 ~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  287 (324)
T 3mtl_A          240 PKYRAEALLSHAPRL-DSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS  287 (324)
T ss_dssp             CCCCCCCHHHHCTTS-CHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred             ccccchhhhhhcCCC-CHHHHHHHHHHcCcCcccCCCHHHHhcChhhhh
Confidence                      00112 256899999999999999999999976665543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.72  E-value=3.4e-18  Score=103.12  Aligned_cols=100  Identities=16%  Similarity=0.082  Sum_probs=70.6

Q ss_pred             ccccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----C-----------CCCCcCC--
Q 041728            3 DILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----P-----------IPLDEML--   64 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~-----------~~~~~~~--   64 (108)
                      ...||+.|+|||.+.+. .++.++|+||+|++++++++|..||.+..........    .           .......  
T Consensus       200 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~  279 (383)
T 3eb0_A          200 AYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFP  279 (383)
T ss_dssp             CCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCC
T ss_pred             CcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCC
Confidence            35688999999988764 4889999999999999999999999865433221110    0           0000000  


Q ss_pred             ----------CCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           65 ----------DPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        65 ----------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                                .+...+..+.+++.+||..||.+||++.+++.+.++..
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          280 TLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH  327 (383)
T ss_dssp             CCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred             ccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence                      11122366999999999999999999999966655543

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.72  E-value=1e-17  Score=98.12  Aligned_cols=97  Identities=16%  Similarity=0.080  Sum_probs=72.1

Q ss_pred             cccccceecccccccCC--CcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYTIK--ITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~--~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..|++.|+|||.+....  ++.++|+||+|+++|++++|..||.................. . +...+..+.+++..||
T Consensus       171 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~-~-~~~~~~~l~~li~~~l  248 (305)
T 2wtk_C          171 SQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYA-I-PGDCGPPLSDLLKGML  248 (305)
T ss_dssp             CCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC-C-CSSSCHHHHHHHHHHT
T ss_pred             CCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCC-C-CCccCHHHHHHHHHHc
Confidence            45889999999987543  367899999999999999999999876544333322111111 1 2223377999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ..||.+||++.+++.+.++..
T Consensus       249 ~~dp~~Rps~~~ll~~~~~~~  269 (305)
T 2wtk_C          249 EYEPAKRFSIRQIRQHSWFRK  269 (305)
T ss_dssp             CSSTTTSCCHHHHHHSHHHHS
T ss_pred             cCChhhCCCHHHHhcCccccc
Confidence            999999999999977776653

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.72  E-value=2.4e-18  Score=101.81  Aligned_cols=99  Identities=17%  Similarity=0.179  Sum_probs=70.0

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---hcCCC--------------------
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---HLPIP--------------------   59 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--------------------   59 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||..........   .....                    
T Consensus       193 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  272 (339)
T 1z57_A          193 TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRL  272 (339)
T ss_dssp             SSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEE
T ss_pred             cccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccc
Confidence            4578999999999988889999999999999999999999997554222111   00000                    


Q ss_pred             ------------------CCc-CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           60 ------------------LDE-MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        60 ------------------~~~-~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                                        ... ...+...+..+.+++..||..||.+||++.+++.+.++.
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~  333 (339)
T 1z57_A          273 DWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFD  333 (339)
T ss_dssp             CCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGG
T ss_pred             cccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHH
Confidence                              000 000111124588999999999999999999996555543

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.72  E-value=2.2e-18  Score=103.47  Aligned_cols=96  Identities=11%  Similarity=0.051  Sum_probs=69.4

Q ss_pred             ccccccceeccccccc------CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCC---CCCCchHH
Q 041728            3 DILLEFMNFFEGLAYT------IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLD---PRLPPDPL   73 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~------~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~   73 (108)
                      ...||+.|+|||.+..      ..++.++|+||+|+++|++++|..||.....................   ... +..+
T Consensus       258 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~  336 (365)
T 2y7j_A          258 ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDR-SSTV  336 (365)
T ss_dssp             CCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSS-CHHH
T ss_pred             cCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccC-CHHH
Confidence            3578999999998753      35778999999999999999999999765433332211111111111   122 3669


Q ss_pred             HHHHhhhcCCCCCCCCCHhhHHHHHH
Q 041728           74 FDVAFSCLNGNPESRLIITLTDGLKR   99 (108)
Q Consensus        74 ~~l~~~c~~~~p~~Rp~~~~l~~l~~   99 (108)
                      .+++..||..||.+||++.+++.+.+
T Consensus       337 ~~li~~~L~~dP~~Rps~~ell~hp~  362 (365)
T 2y7j_A          337 KDLISRLLQVDPEARLTAEQALQHPF  362 (365)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             HHHHHHHcCCChhHCcCHHHHhcCcc
Confidence            99999999999999999999965544

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.72  E-value=2e-18  Score=104.70  Aligned_cols=87  Identities=20%  Similarity=0.138  Sum_probs=64.6

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchh--------HHhh-hhcCCCCCcCCCCCCCchHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF--------LQFQ-LHLPIPLDEMLDPRLPPDPL   73 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~   73 (108)
                      ..+||+.|+|||.+....++.++|+||+|+++|++++|..||.....        .... ..+...  ....|...+..+
T Consensus       212 ~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~~  289 (396)
T 4dc2_A          212 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKA  289 (396)
T ss_dssp             CCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC--CCCCCTTSCHHH
T ss_pred             cccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc--ccCCCCcCCHHH
Confidence            56899999999999988899999999999999999999999963211        0001 111111  111222234779


Q ss_pred             HHHHhhhcCCCCCCCCCH
Q 041728           74 FDVAFSCLNGNPESRLII   91 (108)
Q Consensus        74 ~~l~~~c~~~~p~~Rp~~   91 (108)
                      .+++.+||+.||.+|+++
T Consensus       290 ~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          290 ASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             HHHHHHHTCSCTTTSTTC
T ss_pred             HHHHHHHhcCCHhHcCCC
Confidence            999999999999999986

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.72  E-value=7e-18  Score=100.38  Aligned_cols=98  Identities=12%  Similarity=0.027  Sum_probs=69.6

Q ss_pred             ccccccceecccccccC-CCcc-cccchhhhHHHHHHHhCCCCCCcchh-HHhhhhcCCCCCcCCC--------------
Q 041728            3 DILLEFMNFFEGLAYTI-KITE-KYDVYSFGVLVLEVIKGKHPRDQMFF-LQFQLHLPIPLDEMLD--------------   65 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~-~~~~-~~di~s~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------------   65 (108)
                      ...|++.|+|||.+... .++. ++|+||+|++++++++|..||..... ................              
T Consensus       209 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  288 (348)
T 2pml_X          209 GSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKS  288 (348)
T ss_dssp             SSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC---
T ss_pred             CCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhcccccccc
Confidence            35688999999999876 5665 89999999999999999999976543 2222222111111110              


Q ss_pred             ---CCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           66 ---PRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        66 ---~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                         ....+..+.+++..||..||.+||++.+++.+.++
T Consensus       289 ~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f  326 (348)
T 2pml_X          289 TCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL  326 (348)
T ss_dssp             -----CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGG
T ss_pred             ccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccc
Confidence               02233779999999999999999999998654443

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.72  E-value=3.9e-18  Score=100.88  Aligned_cols=97  Identities=15%  Similarity=0.097  Sum_probs=70.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHH---------------hhhhcCCCCCcCCCCCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ---------------FQLHLPIPLDEMLDPRL   68 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~   68 (108)
                      ..||+.|+|||.+....++.++||||+|++++++++|..|+.......               ......... ....+..
T Consensus       190 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  268 (327)
T 3lxl_A          190 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ-RLPAPPA  268 (327)
T ss_dssp             CCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTC-CCCCCTT
T ss_pred             CCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhccc-CCCCCCc
Confidence            357778999999988888999999999999999999999886443211               011111111 1112222


Q ss_pred             CchHHHHHHhhhcCCCCCCCCCHhhH-HHHHHHH
Q 041728           69 PPDPLFDVAFSCLNGNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        69 ~~~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      .+..+.+++..||..||.+||++.++ ..|+.+.
T Consensus       269 ~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  302 (327)
T 3lxl_A          269 CPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW  302 (327)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred             ccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            33779999999999999999999999 6666553

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.72  E-value=5.5e-18  Score=99.73  Aligned_cols=95  Identities=21%  Similarity=0.245  Sum_probs=66.4

Q ss_pred             ccccceecccccccCC---CcccccchhhhHHHHHHHhCCCCCCcchhHH--hhhhcCCCCCcCCCCCCCchHHHHHHhh
Q 041728            5 LLEFMNFFEGLAYTIK---ITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ--FQLHLPIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~---~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      .||+.|+|||.+....   ++.++||||+|+++|++++|..||.......  ........ .....+...+..+.+++..
T Consensus       204 ~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~  282 (317)
T 2buj_A          204 RCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ-LSIPQSPRHSSALWQLLNS  282 (317)
T ss_dssp             HSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC---CCCCTTSCHHHHHHHHH
T ss_pred             cCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhcc-CCCCccccCCHHHHHHHHH
Confidence            4688999999987543   6789999999999999999999986432110  00011111 1111112223779999999


Q ss_pred             hcCCCCCCCCCHhhH-HHHHHH
Q 041728           80 CLNGNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l-~~l~~l  100 (108)
                      ||..||.+||++.++ ..++.+
T Consensus       283 ~l~~dp~~Rps~~~ll~~L~~~  304 (317)
T 2buj_A          283 MMTVDPHQRPHIPLLLSQLEAL  304 (317)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHT
T ss_pred             HhhcChhhCCCHHHHHHHhhhc
Confidence            999999999999999 555554

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.72  E-value=3.1e-18  Score=101.90  Aligned_cols=99  Identities=18%  Similarity=0.160  Sum_probs=70.0

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---hcCCCCC------------------
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---HLPIPLD------------------   61 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------------------   61 (108)
                      ...||+.|+|||.+.+..++.++|+||+|+++|++++|..||..........   .......                  
T Consensus       198 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  277 (355)
T 2eu9_A          198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGL  277 (355)
T ss_dssp             SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEE
T ss_pred             CCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhccccc
Confidence            4578999999999988889999999999999999999999997654222111   0000000                  


Q ss_pred             ---------------------cCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           62 ---------------------EMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        62 ---------------------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                                           ...........+.+++..||..||.+||++.+++.+.++.
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~  338 (355)
T 2eu9_A          278 VWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFA  338 (355)
T ss_dssp             CCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGG
T ss_pred             ccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence                                 0000001113588999999999999999999996555543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.72  E-value=7.7e-18  Score=99.61  Aligned_cols=99  Identities=16%  Similarity=0.134  Sum_probs=71.4

Q ss_pred             ccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH----------------HhhhhcCCCCCcCCCCCC
Q 041728            5 LLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL----------------QFQLHLPIPLDEMLDPRL   68 (108)
Q Consensus         5 ~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~   68 (108)
                      .++..|+|||.+....++.++|+||+|++++++++|..|+......                .......... ....+..
T Consensus       209 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  287 (326)
T 2w1i_A          209 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDG  287 (326)
T ss_dssp             SCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTC-CCCCCTT
T ss_pred             CCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCC-CCCCCCc
Confidence            4667799999998888889999999999999999998887533100                0001111111 1112223


Q ss_pred             CchHHHHHHhhhcCCCCCCCCCHhhH-HHHHHHHHHH
Q 041728           69 PPDPLFDVAFSCLNGNPESRLIITLT-DGLKRLASFL  104 (108)
Q Consensus        69 ~~~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l~~~~  104 (108)
                      .+..+.+++..||..||.+||++.++ ..|+.+...+
T Consensus       288 ~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l  324 (326)
T 2w1i_A          288 CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM  324 (326)
T ss_dssp             CCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence            34789999999999999999999999 7788777654

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.72  E-value=3.9e-18  Score=103.83  Aligned_cols=90  Identities=12%  Similarity=0.001  Sum_probs=67.3

Q ss_pred             ccccccceeccccc----------ccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchH
Q 041728            3 DILLEFMNFFEGLA----------YTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDP   72 (108)
Q Consensus         3 ~~~~~~~~~ape~~----------~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (108)
                      ..+| +.|+|||.+          ....++.++||||+|+++|++++|..||..............     ..+.++ ..
T Consensus       267 ~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~-----~~~~~~-~~  339 (413)
T 3dzo_A          267 SPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFR-----SCKNIP-QP  339 (413)
T ss_dssp             CCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGS-----SCCCCC-HH
T ss_pred             cCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHh-----hcccCC-HH
Confidence            3567 899999998          445578899999999999999999999986653322221111     112333 77


Q ss_pred             HHHHHhhhcCCCCCCCCCHhhHHHHHH
Q 041728           73 LFDVAFSCLNGNPESRLIITLTDGLKR   99 (108)
Q Consensus        73 ~~~l~~~c~~~~p~~Rp~~~~l~~l~~   99 (108)
                      +.+++..||..||.+||++.+++...+
T Consensus       340 ~~~li~~~l~~dP~~Rpt~~~~l~~~~  366 (413)
T 3dzo_A          340 VRALLEGFLRYPKEDRLLPLQAMETPE  366 (413)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHhCHH
Confidence            999999999999999999988844333

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.72  E-value=4.5e-18  Score=104.12  Aligned_cols=96  Identities=19%  Similarity=0.143  Sum_probs=64.8

Q ss_pred             cccccceeccccccc-------CCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhh-hcCCCCCcC--CCCCCCchH
Q 041728            4 ILLEFMNFFEGLAYT-------IKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQL-HLPIPLDEM--LDPRLPPDP   72 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-------~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~   72 (108)
                      ..||+.|+|||.+..       ..++.++||||+|+++|++++ |..||.......... .........  ......+.+
T Consensus       192 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  271 (434)
T 2rio_A          192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAE  271 (434)
T ss_dssp             ---CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHHH
T ss_pred             CCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcCCCCcccccccccccchHH
Confidence            469999999999865       567889999999999999998 899987543222111 111111111  000001256


Q ss_pred             HHHHHhhhcCCCCCCCCCHhhHHHHHH
Q 041728           73 LFDVAFSCLNGNPESRLIITLTDGLKR   99 (108)
Q Consensus        73 ~~~l~~~c~~~~p~~Rp~~~~l~~l~~   99 (108)
                      +.+++..||..||.+||++.+++.+.+
T Consensus       272 ~~~li~~~L~~dP~~Rps~~eil~hp~  298 (434)
T 2rio_A          272 ATDLISQMIDHDPLKRPTAMKVLRHPL  298 (434)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHHHHhhCChhhCCCHHHHHhCCc
Confidence            899999999999999999999855433

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.72  E-value=2.2e-18  Score=102.73  Aligned_cols=98  Identities=10%  Similarity=-0.025  Sum_probs=68.4

Q ss_pred             ccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---hcCCCCCcCCCCCC----------
Q 041728            3 DILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---HLPIPLDEMLDPRL----------   68 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~----------   68 (108)
                      ...||+.|+|||.+.+ ..++.++||||+|++++++++|..||.+........   ...........+..          
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  266 (351)
T 3mi9_A          187 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLE  266 (351)
T ss_dssp             SSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSC
T ss_pred             CcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccc
Confidence            3467999999998875 457899999999999999999999998654322111   00000000000000          


Q ss_pred             -----------------CchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           69 -----------------PPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        69 -----------------~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                                       .+..+.+++.+||..||.+||++++++.+.++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f  315 (351)
T 3mi9_A          267 LVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF  315 (351)
T ss_dssp             CCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             cccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCc
Confidence                             02458899999999999999999999766555

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.72  E-value=5.5e-18  Score=98.62  Aligned_cols=98  Identities=15%  Similarity=0.097  Sum_probs=72.4

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCC--cCCC-CCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLD--EMLD-PRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~l~~~c   80 (108)
                      ..|++.|+|||.+. +.++.++|+||+|+++|++++|..||.+...............  .... ..+ +..+.+++..|
T Consensus       183 ~~~~~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~  260 (287)
T 2wei_A          183 RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI-SDDAKDLIRKM  260 (287)
T ss_dssp             HHHHHTTCCHHHHT-TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTS-CHHHHHHHHHH
T ss_pred             ccCcccccChHHhc-CCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhc-CHHHHHHHHHH
Confidence            34788899999876 4588899999999999999999999987654433322111111  1111 222 37799999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRLASF  103 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l~~~  103 (108)
                      |..+|.+||++.+++.+.++...
T Consensus       261 l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          261 LTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             TCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             cccChhhCcCHHHHhcCHHHhcc
Confidence            99999999999999777777653

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.72  E-value=4.5e-18  Score=100.78  Aligned_cols=97  Identities=21%  Similarity=0.205  Sum_probs=70.0

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc---------------------C-CCC
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL---------------------P-IPL   60 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~-~~~   60 (108)
                      ..|++.|+|||.+... .++.++|+||+|+++|++++|..||.+..........                     . ...
T Consensus       184 ~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (331)
T 4aaa_A          184 EVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL  263 (331)
T ss_dssp             CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCC
T ss_pred             CcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccC
Confidence            4688999999998764 6788999999999999999999999765432211100                     0 000


Q ss_pred             CcCC--------CCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           61 DEML--------DPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        61 ~~~~--------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ....        .+..+ ..+.+++..||..||.+||++.+++.+.++.
T Consensus       264 ~~~~~~~~~~~~~~~~~-~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~  311 (331)
T 4aaa_A          264 PEIKEREPLERRYPKLS-EVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ  311 (331)
T ss_dssp             CCCSSCCCHHHHSTTSC-HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             ccccccchhhhcccchh-HHHHHHHHHHhccCcccCCCHHHHhcCchhc
Confidence            0000        11222 6799999999999999999999997666664

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.72  E-value=1.4e-18  Score=101.98  Aligned_cols=97  Identities=14%  Similarity=0.087  Sum_probs=65.6

Q ss_pred             ccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----C------------CC---CCc
Q 041728            3 DILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----P------------IP---LDE   62 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~------------~~---~~~   62 (108)
                      ...||+.|+|||.+.. ..++.++|+||+|++++++++|..||.+..........    .            ..   ...
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (311)
T 4agu_A          161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK  240 (311)
T ss_dssp             -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCC
T ss_pred             CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCc
Confidence            3468899999999875 56789999999999999999999999765432211100    0            00   000


Q ss_pred             CC-----------CCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           63 ML-----------DPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        63 ~~-----------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ..           .+..+ ..+.+++..||..||.+||++++++.+.++
T Consensus       241 ~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~ell~hp~f  288 (311)
T 4agu_A          241 IPDPEDMEPLELKFPNIS-YPALGLLKGCLHMDPTERLTCEQLLHHPYF  288 (311)
T ss_dssp             CCCCSSCCCHHHHCTTCC-HHHHHHHHHHCCSSTTTSCCHHHHHTSGGG
T ss_pred             CCCccccchhhhhccccc-HHHHHHHHHHccCChhhcCCHHHHhcChHH
Confidence            00           02222 568999999999999999999998655544

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.72  E-value=2.1e-18  Score=101.76  Aligned_cols=99  Identities=16%  Similarity=0.113  Sum_probs=69.5

Q ss_pred             ccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CCC-----------------C
Q 041728            3 DILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PIP-----------------L   60 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----------------~   60 (108)
                      ...||+.|+|||.+.. ..++.++|+||+|+++|++++|..||.+..........    ...                 .
T Consensus       167 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  246 (317)
T 2pmi_A          167 SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNI  246 (317)
T ss_dssp             CCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTC
T ss_pred             CCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhccccc
Confidence            3468999999999875 45789999999999999999999999765432211100    000                 0


Q ss_pred             Cc-----------CCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           61 DE-----------MLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        61 ~~-----------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ..           ...+...+..+.+++.+||+.||.+||++.+++.+.++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~  298 (317)
T 2pmi_A          247 QQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFA  298 (317)
T ss_dssp             CCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGG
T ss_pred             ccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhh
Confidence            00           000111236799999999999999999999996665554

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.71  E-value=1.5e-17  Score=99.94  Aligned_cols=98  Identities=13%  Similarity=0.068  Sum_probs=71.0

Q ss_pred             ccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc-------------------------
Q 041728            3 DILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL-------------------------   56 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------   56 (108)
                      ...||+.|+|||.+.. ..++.++|+||+|++++++++|..||.+.+.......+                         
T Consensus       184 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~  263 (367)
T 1cm8_A          184 GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK  263 (367)
T ss_dssp             SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHH
T ss_pred             cCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHH
Confidence            4578999999998876 67889999999999999999999999865432211100                         


Q ss_pred             --C---CCCCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           57 --P---IPLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        57 --~---~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                        .   ........+.. +..+.+++.+||..||.+||++.+++.+.++.
T Consensus       264 ~~~~~~~~~~~~~~~~~-~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~  312 (367)
T 1cm8_A          264 GLPELEKKDFASILTNA-SPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE  312 (367)
T ss_dssp             HSCCCCCCCGGGTCTTC-CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGT
T ss_pred             hCCCCCCCCHHHHCCCC-CHHHHHHHHHHccCChhHCCCHHHHhcChHHH
Confidence              0   00001111222 36799999999999999999999997665553

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.71  E-value=4.9e-19  Score=109.18  Aligned_cols=99  Identities=11%  Similarity=0.042  Sum_probs=69.1

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CC------------------CC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PI------------------PL   60 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~------------------~~   60 (108)
                      ..+||+.|+|||.+.+..++.++||||+|++++++++|..||.+.+.......+    ..                  ..
T Consensus       222 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~  301 (464)
T 3ttj_A          222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR  301 (464)
T ss_dssp             ---CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTS
T ss_pred             CCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcc
Confidence            467899999999999888999999999999999999999999865432211100    00                  00


Q ss_pred             CcCC------------CCCCC------chHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           61 DEML------------DPRLP------PDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        61 ~~~~------------~~~~~------~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ....            .+...      ...+.+|+.+||..||.+||++++++.+.++.
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~  360 (464)
T 3ttj_A          302 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN  360 (464)
T ss_dssp             CCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTG
T ss_pred             cccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhh
Confidence            0000            00000      13588999999999999999999997666553

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.71  E-value=1e-17  Score=98.86  Aligned_cols=97  Identities=12%  Similarity=0.092  Sum_probs=70.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CC--------------------
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PI--------------------   58 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~--------------------   58 (108)
                      ...|++.|+|||.+....++.++|+||+|+++|++++|..||.+..........    ..                    
T Consensus       178 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (326)
T 1blx_A          178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSK  257 (326)
T ss_dssp             CCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCC
T ss_pred             ccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhccc
Confidence            356889999999998888999999999999999999999999765432211100    00                    


Q ss_pred             --CCCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           59 --PLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        59 --~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                        .......+.+ +..+.+++.+||..||.+||++.+++.+.++
T Consensus       258 ~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~  300 (326)
T 1blx_A          258 SAQPIEKFVTDI-DELGKDLLLKCLTFNPAKRISAYSALSHPYF  300 (326)
T ss_dssp             CCCCGGGTCCSC-CHHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred             CcchhhhccccC-CHHHHHHHHHHcCCCcccCCCHHHHhcCccc
Confidence              0000011222 2668999999999999999999998655544

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.71  E-value=1.1e-18  Score=102.59  Aligned_cols=97  Identities=12%  Similarity=0.020  Sum_probs=68.0

Q ss_pred             cccccceeccccccc-----CCCcccccchhhhHHHHHHHhCCCCCCcchhH---------------HhhhhcCCCCCcC
Q 041728            4 ILLEFMNFFEGLAYT-----IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL---------------QFQLHLPIPLDEM   63 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~   63 (108)
                      ..||+.|+|||.+..     ..++.++||||+|+++|++++|..||.+....               .............
T Consensus       181 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  260 (316)
T 2ac3_A          181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEF  260 (316)
T ss_dssp             -CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCC
T ss_pred             ccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCccc
Confidence            358999999999864     45778999999999999999999999754210               0001111111111


Q ss_pred             CC---CCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           64 LD---PRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        64 ~~---~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ..   ..++ ..+.+++..||..||.+||++.+++.+.++.
T Consensus       261 ~~~~~~~~~-~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~  300 (316)
T 2ac3_A          261 PDKDWAHIS-CAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ  300 (316)
T ss_dssp             CHHHHTTSC-HHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC
T ss_pred             CchhcccCC-HHHHHHHHHHhhCChhhCCCHHHHhcChhhc
Confidence            10   1223 6799999999999999999999997666554

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.71  E-value=1.2e-17  Score=97.64  Aligned_cols=96  Identities=18%  Similarity=0.199  Sum_probs=68.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchh--------------H-HhhhhcCCCCCcCCCCCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF--------------L-QFQLHLPIPLDEMLDPRL   68 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~--------------~-~~~~~~~~~~~~~~~~~~   68 (108)
                      ..||..|+|||.+....++.++|+||+|++++++++|..|+.....              . ...............+..
T Consensus       189 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (302)
T 4e5w_A          189 RDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNC  268 (302)
T ss_dssp             TTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTC
T ss_pred             CCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCC
Confidence            4577789999999888888999999999999999998887543211              1 111111111111122233


Q ss_pred             CchHHHHHHhhhcCCCCCCCCCHhhH-HHHHHH
Q 041728           69 PPDPLFDVAFSCLNGNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        69 ~~~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l  100 (108)
                       +..+.+++..||..||.+||++.++ ..++.+
T Consensus       269 -~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  300 (302)
T 4e5w_A          269 -PDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL  300 (302)
T ss_dssp             -CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -CHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence             3779999999999999999999999 656554

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.71  E-value=1.9e-18  Score=103.56  Aligned_cols=99  Identities=16%  Similarity=0.174  Sum_probs=69.9

Q ss_pred             ccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CCCC-----------------
Q 041728            3 DILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PIPL-----------------   60 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----------------   60 (108)
                      ...||+.|+|||.+.. ..++.++|+||+|+++|++++|..||.+..........    ....                 
T Consensus       190 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  269 (364)
T 3qyz_A          190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL  269 (364)
T ss_dssp             CCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHH
T ss_pred             ccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHH
Confidence            3578999999998764 44789999999999999999999999765422211100    0000                 


Q ss_pred             ----C-----cCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           61 ----D-----EMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        61 ----~-----~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                          .     ....+..+ ..+.+++.+||..||.+||++.+++.+.++..
T Consensus       270 ~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  319 (364)
T 3qyz_A          270 SLPHKNKVPWNRLFPNAD-SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ  319 (364)
T ss_dssp             TSCCCCCCCHHHHCTTSC-HHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred             hcCCccCCCHHHhCCCCC-HHHHHHHHHHcCCChhhCCCHHHHhcCcchhh
Confidence                0     00012223 66999999999999999999999976665543

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.71  E-value=1.2e-18  Score=101.55  Aligned_cols=97  Identities=12%  Similarity=0.094  Sum_probs=68.6

Q ss_pred             ccccccceecccccccCC--CcccccchhhhHHHHHHHhCCCCCCcchhHHhhh--hcCCCCCcCCCCCCCchHHHHHHh
Q 041728            3 DILLEFMNFFEGLAYTIK--ITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL--HLPIPLDEMLDPRLPPDPLFDVAF   78 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~--~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~   78 (108)
                      ...|++.|+|||.+....  ++.++|+|++|+++|++++|..||..........  .............. +..+.+++.
T Consensus       182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~  260 (295)
T 2clq_A          182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESM-SAEAKAFIL  260 (295)
T ss_dssp             CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTS-CHHHHHHHH
T ss_pred             ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccC-CHHHHHHHH
Confidence            346889999999987543  7789999999999999999999997543211111  00001111122223 377999999


Q ss_pred             hhcCCCCCCCCCHhhHHHHHHH
Q 041728           79 SCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        79 ~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      .||..||.+||++.+++.+.++
T Consensus       261 ~~l~~dp~~Rps~~~ll~~~~~  282 (295)
T 2clq_A          261 KCFEPDPDKRACANDLLVDEFL  282 (295)
T ss_dssp             HTTCSSTTTSCCHHHHHTSGGG
T ss_pred             HHccCChhhCCCHHHHhcChhh
Confidence            9999999999999998655444

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.71  E-value=3.3e-18  Score=104.33  Aligned_cols=98  Identities=17%  Similarity=0.143  Sum_probs=70.4

Q ss_pred             ccccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh----c-----------CCCCCcC---
Q 041728            3 DILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH----L-----------PIPLDEM---   63 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~----~-----------~~~~~~~---   63 (108)
                      ...||+.|+|||.+... .++.++||||+|+++|++++|+.||.+.........    .           .......   
T Consensus       215 ~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p  294 (420)
T 1j1b_A          215 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFP  294 (420)
T ss_dssp             SCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCC
T ss_pred             eeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccC
Confidence            35789999999998754 688999999999999999999999986543221110    0           0000000   


Q ss_pred             ----------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           64 ----------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        64 ----------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                                ..+.. +.++.+++.+||..||.+||++.+++.+.++.
T Consensus       295 ~~~~~~~~~~~~~~~-~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~  341 (420)
T 1j1b_A          295 QIKAHPWTKVFRPRT-PPEAIALCSRLLEYTPTARLTPLEACAHSFFD  341 (420)
T ss_dssp             CCCCCCHHHHSCTTS-CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGG
T ss_pred             ccCCCCHHHhcCCCC-CHHHHHHHHHhccCChhHCCCHHHHhCCHhhc
Confidence                      11122 36799999999999999999999986655553

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.71  E-value=2.3e-18  Score=101.73  Aligned_cols=95  Identities=23%  Similarity=0.318  Sum_probs=66.9

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH--------Hhhhh--cCCCCCcCCCC----CCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL--------QFQLH--LPIPLDEMLDP----RLP   69 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~~~~~----~~~   69 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|..||......        .+...  ...........    ...
T Consensus       195 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (326)
T 3uim_A          195 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYK  274 (326)
T ss_dssp             CCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCC
T ss_pred             ccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccC
Confidence            45899999999998888899999999999999999999999633211        11110  01111111111    111


Q ss_pred             c---hHHHHHHhhhcCCCCCCCCCHhhH-HHHH
Q 041728           70 P---DPLFDVAFSCLNGNPESRLIITLT-DGLK   98 (108)
Q Consensus        70 ~---~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~   98 (108)
                      .   ..+.+++..||..+|.+||++.+| ..|+
T Consensus       275 ~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          275 DEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             HHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence            1   458899999999999999999999 4443

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.71  E-value=6.1e-18  Score=103.16  Aligned_cols=97  Identities=11%  Similarity=0.075  Sum_probs=65.4

Q ss_pred             ccccccceeccccccc---CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhh-hhcCCCCCcCC---CCCCCchHHHH
Q 041728            3 DILLEFMNFFEGLAYT---IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQ-LHLPIPLDEML---DPRLPPDPLFD   75 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~   75 (108)
                      ..+||+.|+|||.+..   ..++.++|+||+|+++|++++|..||......... ...........   .+.++ ..+.+
T Consensus       300 ~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~  378 (419)
T 3i6u_A          300 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS-EKALD  378 (419)
T ss_dssp             -----CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSC-HHHHH
T ss_pred             ccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccC-HHHHH
Confidence            4578999999999853   56788999999999999999999999754311111 01111111111   12223 67999


Q ss_pred             HHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ++..||+.||.+||++.+++.+.++
T Consensus       379 li~~~L~~dP~~Rps~~e~l~hp~~  403 (419)
T 3i6u_A          379 LVKKLLVVDPKARFTTEEALRHPWL  403 (419)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred             HHHHHccCChhHCcCHHHHhCCccc
Confidence            9999999999999999998766555

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.71  E-value=4.3e-18  Score=102.88  Aligned_cols=95  Identities=13%  Similarity=0.134  Sum_probs=67.5

Q ss_pred             ccccccceeccccccc---CCCcccccchhhhHHHHHHHhCCCCCCcchhH---HhhhhcCCCCCcCCCCCCCchHHHHH
Q 041728            3 DILLEFMNFFEGLAYT---IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL---QFQLHLPIPLDEMLDPRLPPDPLFDV   76 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l   76 (108)
                      ..+||+.|+|||.+..   ..++.++|+||+|+++|++++|..||......   .........  ....+...+..+.++
T Consensus       173 ~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~p~~~s~~~~~l  250 (384)
T 4fr4_A          173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETT--VVTYPSAWSQEMVSL  250 (384)
T ss_dssp             CCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHC--CCCCCTTSCHHHHHH
T ss_pred             ccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhc--ccCCCCcCCHHHHHH
Confidence            5679999999999864   34788999999999999999999999743211   111111111  111222334789999


Q ss_pred             HhhhcCCCCCCCCC-HhhHHHHHH
Q 041728           77 AFSCLNGNPESRLI-ITLTDGLKR   99 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~-~~~l~~l~~   99 (108)
                      +..||..||.+||+ ++++..+.+
T Consensus       251 i~~lL~~dP~~R~s~~~~l~~hp~  274 (384)
T 4fr4_A          251 LKKLLEPNPDQRFSQLSDVQNFPY  274 (384)
T ss_dssp             HHHHSCSSGGGSCCSHHHHHTSGG
T ss_pred             HHHHhcCCHhHhcccHHHHHcChh
Confidence            99999999999998 676654433

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.71  E-value=2.1e-18  Score=105.00  Aligned_cols=99  Identities=10%  Similarity=-0.035  Sum_probs=73.3

Q ss_pred             ccccccceecccccccCC----CcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCC--CcCCCCCCCchHHHHH
Q 041728            3 DILLEFMNFFEGLAYTIK----ITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPL--DEMLDPRLPPDPLFDV   76 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~----~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l   76 (108)
                      ..+||+.|+|||.+....    ++.++|+||+|+++|++++|..||.+.+.......+....  .........+.++.++
T Consensus       228 ~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~l  307 (410)
T 3v8s_A          228 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL  307 (410)
T ss_dssp             SCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHH
T ss_pred             CCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHH
Confidence            567999999999987644    7789999999999999999999998776544433222111  1111111223779999


Q ss_pred             HhhhcCCCCCC--CCCHhhHHHHHHHH
Q 041728           77 AFSCLNGNPES--RLIITLTDGLKRLA  101 (108)
Q Consensus        77 ~~~c~~~~p~~--Rp~~~~l~~l~~l~  101 (108)
                      +.+||..+|.+  |+++++|..+.++.
T Consensus       308 i~~lL~~~~~rlgR~~~~ei~~Hp~f~  334 (410)
T 3v8s_A          308 ICAFLTDREVRLGRNGVEEIKRHLFFK  334 (410)
T ss_dssp             HHHHSSCGGGCTTSSCHHHHHTSGGGC
T ss_pred             HHHHccChhhhCCCCCHHHHhcCcccc
Confidence            99999988888  99999996665543

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.71  E-value=4.1e-18  Score=101.57  Aligned_cols=98  Identities=15%  Similarity=0.085  Sum_probs=69.0

Q ss_pred             ccccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----C----CCCCcC------C---
Q 041728            3 DILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----P----IPLDEM------L---   64 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~------~---   64 (108)
                      ...||+.|+|||.+... .++.++|+||+|+++|++++|..||.+..........    .    ......      .   
T Consensus       171 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  250 (346)
T 1ua2_A          171 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK  250 (346)
T ss_dssp             CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred             cccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCccccccc
Confidence            35689999999998654 4788999999999999999999998765433221110    0    000000      0   


Q ss_pred             -CC--------CCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           65 -DP--------RLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        65 -~~--------~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                       .+        ...+..+.+++..||..||.+||++.+++.+.++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f  295 (346)
T 1ua2_A          251 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF  295 (346)
T ss_dssp             CCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGG
T ss_pred             ccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhh
Confidence             00        1112669999999999999999999999665554

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.71  E-value=1.5e-17  Score=96.20  Aligned_cols=98  Identities=15%  Similarity=0.071  Sum_probs=68.5

Q ss_pred             ccccccceecccccccCCC-cccccchhhhHHHHHHHhCCCCCCcchhHH-hhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            3 DILLEFMNFFEGLAYTIKI-TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ-FQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~-~~~~di~s~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ...|++.|+|||.+....+ +.++|+||+|++++++++|..||....... ..................+..+.+++..|
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  245 (276)
T 2yex_A          166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI  245 (276)
T ss_dssp             CCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHH
T ss_pred             CCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHH
Confidence            3468899999999887665 678999999999999999999997543211 11110111111111111236799999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      |..||.+||++.+++.+.++
T Consensus       246 l~~~p~~Rps~~~il~~~~~  265 (276)
T 2yex_A          246 LVENPSARITIPDIKKDRWY  265 (276)
T ss_dssp             SCSSTTTSCCHHHHTTCTTT
T ss_pred             CCCCchhCCCHHHHhcCccc
Confidence            99999999999999655444

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.71  E-value=4e-18  Score=101.74  Aligned_cols=96  Identities=19%  Similarity=0.121  Sum_probs=68.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchh--------HHh-hhhcCCCCCcCCCCCCCchHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF--------LQF-QLHLPIPLDEMLDPRLPPDPL   73 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~   73 (108)
                      ..+||+.|+|||.+....++.++|+||+|+++|++++|..||.....        ... ...+...  ....|...+..+
T Consensus       169 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~~  246 (345)
T 3a8x_A          169 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKA  246 (345)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--CCCCCTTSCHHH
T ss_pred             ccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--CCCCCCCCCHHH
Confidence            46799999999999888899999999999999999999999964210        000 1111111  111122234779


Q ss_pred             HHHHhhhcCCCCCCCCCH------hhHHHHHHH
Q 041728           74 FDVAFSCLNGNPESRLII------TLTDGLKRL  100 (108)
Q Consensus        74 ~~l~~~c~~~~p~~Rp~~------~~l~~l~~l  100 (108)
                      .+++.+||..||.+||++      .++..+.++
T Consensus       247 ~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f  279 (345)
T 3a8x_A          247 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF  279 (345)
T ss_dssp             HHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGG
T ss_pred             HHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCcc
Confidence            999999999999999996      455444443

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.71  E-value=5.4e-18  Score=102.65  Aligned_cols=97  Identities=15%  Similarity=0.170  Sum_probs=69.6

Q ss_pred             ccccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc--------------------CCCCC
Q 041728            3 DILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL--------------------PIPLD   61 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~   61 (108)
                      ...||+.|+|||.+.+. .++.++||||+|+++|++++|..||.+.........+                    .....
T Consensus       200 ~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~  279 (394)
T 4e7w_A          200 SYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFP  279 (394)
T ss_dssp             SSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCC
T ss_pred             ccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccc
Confidence            45689999999988654 5889999999999999999999999865432211100                    00000


Q ss_pred             --------cCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           62 --------EMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        62 --------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                              ....+.. +.++.+++.+||..||.+||++.+++.+.++
T Consensus       280 ~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f  325 (394)
T 4e7w_A          280 QIRPHPFSKVFRPRT-PPDAIDLISRLLEYTPSARLTAIEALCHPFF  325 (394)
T ss_dssp             CCCCCCHHHHSCTTC-CHHHHHHHHHHCCSSGGGSCCHHHHHTSGGG
T ss_pred             cccCCcHHHhccccC-CHHHHHHHHHHhCCChhhCCCHHHHhcChhh
Confidence                    0011122 3679999999999999999999998665554

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.70  E-value=7.4e-18  Score=99.53  Aligned_cols=90  Identities=13%  Similarity=0.086  Sum_probs=68.4

Q ss_pred             ccccccceecccccccCCC-cccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKI-TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~-~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ...||+.|+|||.+....+ +.++|+||+|+++|++++|..||........   ..    ......+ +..+.+++..||
T Consensus       207 ~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~----~~~~~~~-~~~~~~li~~~l  278 (320)
T 3a99_A          207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---GQ----VFFRQRV-SSECQHLIRWCL  278 (320)
T ss_dssp             CCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH---CC----CCCSSCC-CHHHHHHHHHHT
T ss_pred             CCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhc---cc----ccccccC-CHHHHHHHHHHc
Confidence            3568999999999876665 5788999999999999999999976542211   00    1111223 378999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ..||.+||++++++.+.++
T Consensus       279 ~~dp~~Rps~~~ll~hp~~  297 (320)
T 3a99_A          279 ALRPSDRPTFEEIQNHPWM  297 (320)
T ss_dssp             CSSGGGSCCHHHHHTSGGG
T ss_pred             cCChhhCcCHHHHhcCHhh
Confidence            9999999999998655544

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.70  E-value=4.8e-18  Score=99.10  Aligned_cols=98  Identities=15%  Similarity=0.085  Sum_probs=66.6

Q ss_pred             ccccccceecccccccCC-CcccccchhhhHHHHHHHhCCCCCC-cchhHHhhhh----cCCC----C------------
Q 041728            3 DILLEFMNFFEGLAYTIK-ITEKYDVYSFGVLVLEVIKGKHPRD-QMFFLQFQLH----LPIP----L------------   60 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~-~~~~~di~s~g~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~----~------------   60 (108)
                      ...||+.|+|||.+.+.. ++.++|+||+|++++++++|..|+. +.........    ....    .            
T Consensus       160 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  239 (292)
T 3o0g_A          160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY  239 (292)
T ss_dssp             SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCC
T ss_pred             CCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccccc
Confidence            356899999999987655 7899999999999999998777643 3221111100    0000    0            


Q ss_pred             --------CcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           61 --------DEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        61 --------~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                              .....+.. +..+.+++.+||+.||.+||++++++++.++.
T Consensus       240 ~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  287 (292)
T 3o0g_A          240 PMYPATTSLVNVVPKL-NATGRDLLQNLLKCNPVQRISAEEALQHPYFS  287 (292)
T ss_dssp             CCCCTTCCCTTTSTTC-CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             ccccCCcchhhccccc-ChHHHHHHHHHhccChhhCCCHHHHhcCcccc
Confidence                    00001122 26689999999999999999999997666554

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.70  E-value=3.7e-18  Score=99.74  Aligned_cols=98  Identities=15%  Similarity=0.116  Sum_probs=68.0

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh-hcCCCCCcC----C---CCCCCchHHH
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL-HLPIPLDEM----L---DPRLPPDPLF   74 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~---~~~~~~~~~~   74 (108)
                      ..||+.|+|||.+.. ..++.++|+|++|+++|++++|..||.......... .........    .   .....+..+.
T Consensus       186 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (303)
T 2vwi_A          186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFR  265 (303)
T ss_dssp             --CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHH
T ss_pred             cCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHH
Confidence            468899999998865 467889999999999999999999997654332222 111110000    0   0111236799


Q ss_pred             HHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           75 DVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        75 ~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      +++..||..||.+||++.+++.+.++.
T Consensus       266 ~li~~~l~~dp~~Rps~~~ll~h~~~~  292 (303)
T 2vwi_A          266 KMISLCLQKDPEKRPTAAELLRHKFFQ  292 (303)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHHTSTTC-
T ss_pred             HHHHHHccCChhhCcCHHHHhhChhhh
Confidence            999999999999999999996555443

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.70  E-value=2e-18  Score=104.04  Aligned_cols=98  Identities=11%  Similarity=-0.006  Sum_probs=67.6

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchh---------HHhhhh-cCC--------------
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF---------LQFQLH-LPI--------------   58 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~---------~~~~~~-~~~--------------   58 (108)
                      ...||+.|+|||.+....++.++||||+|+++|++++|..||.....         ...... ...              
T Consensus       252 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  331 (397)
T 1wak_A          252 EDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKE  331 (397)
T ss_dssp             SCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGG
T ss_pred             cCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhccccccc
Confidence            35689999999999888899999999999999999999999964321         000000 000              


Q ss_pred             -----CCCcCCCC--------------CCC---chHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           59 -----PLDEMLDP--------------RLP---PDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        59 -----~~~~~~~~--------------~~~---~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                           ........              ..+   ...+.+++.+||..||.+||++.+++.+.++
T Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~  395 (397)
T 1wak_A          332 FFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL  395 (397)
T ss_dssp             TBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGG
T ss_pred             ccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccc
Confidence                 00000000              001   1347899999999999999999999655543

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.70  E-value=1.7e-17  Score=96.18  Aligned_cols=94  Identities=11%  Similarity=0.032  Sum_probs=69.6

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...|++.|+|||.+....++.++|+||+|+++|++++|..|+........  ....   ..... ..+..+.+++..||.
T Consensus       180 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~--~~~~---~~~~~-~~~~~~~~li~~~l~  253 (284)
T 2a19_B          180 RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFT--DLRD---GIISD-IFDKKEKTLLQKLLS  253 (284)
T ss_dssp             CCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHH--HHHT---TCCCT-TSCHHHHHHHHHHTC
T ss_pred             ccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHH--Hhhc---ccccc-cCCHHHHHHHHHHcc
Confidence            34688999999999888889999999999999999998887654322111  1111   11112 233779999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      .||.+||++.++ ..+..+..
T Consensus       254 ~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          254 KKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             SSGGGSCCHHHHHHHHHHHTC
T ss_pred             CChhhCcCHHHHHHHHHHHhh
Confidence            999999999999 55555543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.70  E-value=8.7e-18  Score=101.01  Aligned_cols=98  Identities=15%  Similarity=0.158  Sum_probs=70.8

Q ss_pred             ccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc-------------------------
Q 041728            3 DILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL-------------------------   56 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------   56 (108)
                      ...||+.|+|||.+.. ..++.++|+||+|++++++++|..||.+..........                         
T Consensus       200 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  279 (371)
T 4exu_A          200 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQ  279 (371)
T ss_dssp             CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHH
T ss_pred             CcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhh
Confidence            4578999999999876 67889999999999999999999999865432211100                         


Q ss_pred             --CCCCC---cCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           57 --PIPLD---EMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        57 --~~~~~---~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                        .....   ....+.. +..+.+++.+||+.||.+||++.+++.+.++.
T Consensus       280 ~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~  328 (371)
T 4exu_A          280 SLPQTPRKDFTQLFPRA-SPQAADLLEKMLELDVDKRLTAAQALTHPFFE  328 (371)
T ss_dssp             HSCCCCCCCHHHHSTTS-CHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGT
T ss_pred             ccCCCcchhHHHhcccc-ChHHHHHHHHHCCCChhhcCCHHHHhcCcccc
Confidence              00000   0001122 36799999999999999999999996665553

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.69  E-value=1.6e-17  Score=102.11  Aligned_cols=99  Identities=15%  Similarity=0.046  Sum_probs=63.8

Q ss_pred             ccccccceecccccc-cCCCcccccchhhhHHHHHHHh-----------CCCCCCcchhH--------------------
Q 041728            3 DILLEFMNFFEGLAY-TIKITEKYDVYSFGVLVLEVIK-----------GKHPRDQMFFL--------------------   50 (108)
Q Consensus         3 ~~~~~~~~~ape~~~-~~~~~~~~di~s~g~~~~~~~~-----------~~~~~~~~~~~--------------------   50 (108)
                      ..+||+.|+|||++. ...++.++||||+||++|++++           +.++|.+....                    
T Consensus       242 ~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~  321 (458)
T 3rp9_A          242 GHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNR  321 (458)
T ss_dssp             ---CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHH
T ss_pred             CCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCH
Confidence            356899999999764 5668999999999999999998           55555432210                    


Q ss_pred             ---Hhhh------------------------hcCCC---CCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           51 ---QFQL------------------------HLPIP---LDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        51 ---~~~~------------------------~~~~~---~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                         ..+.                        .....   ......+.. +..+.+|+.+||..||.+||++++++.+.++
T Consensus       322 ~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f  400 (458)
T 3rp9_A          322 DQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPAS-SADAIHLLKRMLVFNPNKRITINECLAHPFF  400 (458)
T ss_dssp             HHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTS-CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred             HHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCC-CHHHHHHHHHHhccCccccCCHHHHhcCHhh
Confidence               0000                        00000   000011222 3679999999999999999999999777666


Q ss_pred             HH
Q 041728          101 AS  102 (108)
Q Consensus       101 ~~  102 (108)
                      ..
T Consensus       401 ~~  402 (458)
T 3rp9_A          401 KE  402 (458)
T ss_dssp             TT
T ss_pred             hh
Confidence            43

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.69  E-value=1.8e-18  Score=103.62  Aligned_cols=100  Identities=13%  Similarity=0.003  Sum_probs=67.8

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH---------Hhhh-hcCC--------------
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL---------QFQL-HLPI--------------   58 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~---------~~~~-~~~~--------------   58 (108)
                      ...||+.|+|||.+.+..++.++||||+|+++|++++|..||......         .... ....              
T Consensus       194 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  273 (373)
T 1q8y_A          194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRT  273 (373)
T ss_dssp             SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHH
T ss_pred             CCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhh
Confidence            457899999999998888999999999999999999999999744210         0000 0000              


Q ss_pred             -----CC-CcCCC-------------CCCC---chHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           59 -----PL-DEMLD-------------PRLP---PDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        59 -----~~-~~~~~-------------~~~~---~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                           .. .....             ...+   +..+.+++..||..||.+||++.+++.+.++..
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  339 (373)
T 1q8y_A          274 FFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD  339 (373)
T ss_dssp             HBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTT
T ss_pred             hcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhc
Confidence                 00 00000             0011   145889999999999999999999976666544

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.69  E-value=3e-18  Score=105.05  Aligned_cols=98  Identities=9%  Similarity=-0.031  Sum_probs=72.0

Q ss_pred             ccccccceecccccc-----cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCC----CCCCchHH
Q 041728            3 DILLEFMNFFEGLAY-----TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLD----PRLPPDPL   73 (108)
Q Consensus         3 ~~~~~~~~~ape~~~-----~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~   73 (108)
                      ..+||+.|+|||.+.     ...++.++|+||+|+++|++++|..||.+.+.......+.........    ..+ +..+
T Consensus       235 ~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~-s~~~  313 (437)
T 4aw2_A          235 VAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDV-SENA  313 (437)
T ss_dssp             SCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCS-CHHH
T ss_pred             cccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccC-CHHH
Confidence            367999999999986     456889999999999999999999999876644433322111111111    123 3779


Q ss_pred             HHHHhhhcCCCCCC--CCCHhhHHHHHHHH
Q 041728           74 FDVAFSCLNGNPES--RLIITLTDGLKRLA  101 (108)
Q Consensus        74 ~~l~~~c~~~~p~~--Rp~~~~l~~l~~l~  101 (108)
                      .+++.+|+..++..  |++++++..+.++.
T Consensus       314 ~dLi~~lL~~~~~r~~r~~~~eil~Hpff~  343 (437)
T 4aw2_A          314 KDLIRRLICSREHRLGQNGIEDFKKHPFFS  343 (437)
T ss_dssp             HHHHHTTSSCGGGCTTTTTTHHHHTSGGGT
T ss_pred             HHHHHHHhcccccccCCCCHHHHhCCCccC
Confidence            99999999888887  89999986666553

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.69  E-value=4.4e-18  Score=98.97  Aligned_cols=95  Identities=15%  Similarity=0.135  Sum_probs=67.0

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..|++.|+|||.+.. ..++.++||||+|+++|++++ +..|+...............  ....... +..+.+++..||
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~l~~li~~~l  253 (289)
T 4fvq_A          177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR--HQLPAPK-AAELANLINNCM  253 (289)
T ss_dssp             HHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT--CCCCCCS-SCTTHHHHHHHS
T ss_pred             cCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhcc--CCCCCCC-CHHHHHHHHHHc
Confidence            347888999999886 668899999999999999999 45555544332222211111  1111122 356899999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      ..||.+||+++++ ..|+.+.
T Consensus       254 ~~dp~~Rps~~~ll~~l~~l~  274 (289)
T 4fvq_A          254 DYEPDHRPSFRAIIRDLNSLF  274 (289)
T ss_dssp             CSSGGGSCCHHHHHHHHHTCC
T ss_pred             CCChhHCcCHHHHHHHHHHhc
Confidence            9999999999999 6565543

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.69  E-value=4.8e-18  Score=101.46  Aligned_cols=100  Identities=12%  Similarity=0.026  Sum_probs=70.0

Q ss_pred             ccccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcC----C-------------CCCcC-
Q 041728            3 DILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLP----I-------------PLDEM-   63 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------------~~~~~-   63 (108)
                      ...||+.|+|||.+... .++.++||||+|+++|++++|..||.+...........    .             ..... 
T Consensus       190 ~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (360)
T 3e3p_A          190 AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLY  269 (360)
T ss_dssp             STTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGG
T ss_pred             cccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhcccc
Confidence            35689999999998654 47899999999999999999999998654322211100    0             00000 


Q ss_pred             ----------CC--CCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           64 ----------LD--PRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        64 ----------~~--~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                                ..  ....+..+.+++.+||+.||.+||++.+++.+.++..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  320 (360)
T 3e3p_A          270 NSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDE  320 (360)
T ss_dssp             CCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGG
T ss_pred             ccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccc
Confidence                      00  0011256899999999999999999999976666543

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.69  E-value=1.5e-17  Score=96.49  Aligned_cols=95  Identities=9%  Similarity=-0.073  Sum_probs=68.4

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..||+.|+|||.+... .++.++||||+|++++++++|..++...........   .......... +..+.+++..||.
T Consensus       190 ~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~li~~~l~  265 (289)
T 1x8b_A          190 EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQ---GRLPRIPQVL-SQEFTELLKVMIH  265 (289)
T ss_dssp             CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHT---TCCCCCSSCC-CHHHHHHHHHHTC
T ss_pred             cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHc---CCCCCCCccc-CHHHHHHHHHHhC
Confidence            4588999999998765 556799999999999999998876654433222221   1111222233 3779999999999


Q ss_pred             CCCCCCCCHhhHHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      .||.+||++.+++++.++..
T Consensus       266 ~dp~~Rps~~~ll~h~~~~~  285 (289)
T 1x8b_A          266 PDPERRPSAMALVKHSVLLS  285 (289)
T ss_dssp             SSGGGSCCHHHHHTCTTC--
T ss_pred             CCcccCCCHHHHhhChHhhh
Confidence            99999999999976665543

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.69  E-value=1.6e-17  Score=97.71  Aligned_cols=98  Identities=17%  Similarity=0.086  Sum_probs=70.8

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCC------------------------
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPI------------------------   58 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------   58 (108)
                      ..++..|+|||.+.. ..++.++|+||+|+++|++++|..||.+............                        
T Consensus       184 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (320)
T 2i6l_A          184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRND  263 (320)
T ss_dssp             GGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHH
T ss_pred             ccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCccccccc
Confidence            346888999998765 6688899999999999999999999986543322111000                        


Q ss_pred             ---C--CCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           59 ---P--LDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        59 ---~--~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                         .  ......+.++ ..+.+++..||..||.+||++.+++.+.++..
T Consensus       264 ~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  311 (320)
T 2i6l_A          264 MTEPHKPLTQLLPGIS-REAVDFLEQILTFSPMDRLTAEEALSHPYMSI  311 (320)
T ss_dssp             TTSCCCCHHHHSTTCC-HHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHT
T ss_pred             ccCCCCChhHhcchhh-HHHHHHHHHHcCCCccccCCHHHHhCCccccc
Confidence               0  0000012233 67999999999999999999999977777653

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.69  E-value=3.4e-17  Score=97.76  Aligned_cols=98  Identities=16%  Similarity=0.148  Sum_probs=69.4

Q ss_pred             ccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh--------------------------
Q 041728            3 DILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH--------------------------   55 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~--------------------------   55 (108)
                      ...||+.|+|||.+.. ..++.++|+||+|++++++++|..||.+.........                          
T Consensus       182 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
T 3coi_A          182 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQ  261 (353)
T ss_dssp             --CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHH
T ss_pred             ccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHH
Confidence            3568999999998876 5678899999999999999999999986542221110                          


Q ss_pred             -cCCCC---CcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           56 -LPIPL---DEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        56 -~~~~~---~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                       .....   .....+.. +..+.+++.+||..||.+||++.+++.+.++.
T Consensus       262 ~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~  310 (353)
T 3coi_A          262 SLPQTPRKDFTQLFPRA-SPQAADLLEKMLELDVDKRLTAAQALTHPFFE  310 (353)
T ss_dssp             TSCBCSSCCTTTTCTTS-CHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGT
T ss_pred             hCcCCCCccHHHhcCCc-CHHHHHHHHHHcCCCcccCCCHHHHhcCcchh
Confidence             00000   01111222 36799999999999999999999996655543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.69  E-value=8.3e-18  Score=101.08  Aligned_cols=98  Identities=12%  Similarity=0.103  Sum_probs=68.2

Q ss_pred             ccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CCC------------------
Q 041728            3 DILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PIP------------------   59 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~------------------   59 (108)
                      ...||+.|+|||.+.. ..++.++|+||+|++++++++|..||.+.+.......+    ...                  
T Consensus       188 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~  267 (367)
T 2fst_X          188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ  267 (367)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHH
T ss_pred             CcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHh
Confidence            4578999999999876 57889999999999999999999999865432211100    000                  


Q ss_pred             -CCcC-------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           60 -LDEM-------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        60 -~~~~-------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                       ....       ..+.. +..+.+++.+||..||.+||++.+++.+.++.
T Consensus       268 ~~~~~~~~~~~~~~~~~-~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~  316 (367)
T 2fst_X          268 SLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFA  316 (367)
T ss_dssp             TSCCCCCCCHHHHTTTC-CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             ccCCCCCCCHHHHCCCC-CHHHHHHHHHhCCCCcccCcCHHHHhcChhhh
Confidence             0000       01122 26689999999999999999999986655543

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.69  E-value=2.3e-17  Score=97.87  Aligned_cols=99  Identities=12%  Similarity=0.114  Sum_probs=65.9

Q ss_pred             cccccceecccccccC------CCcccccchhhhHHHHHHHhC----------CCCCCcchh-----HHhhhhcCCCCCc
Q 041728            4 ILLEFMNFFEGLAYTI------KITEKYDVYSFGVLVLEVIKG----------KHPRDQMFF-----LQFQLHLPIPLDE   62 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~------~~~~~~di~s~g~~~~~~~~~----------~~~~~~~~~-----~~~~~~~~~~~~~   62 (108)
                      ..||+.|+|||.+...      .++.++|+||+|+++|++++|          ..||.....     .............
T Consensus       211 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  290 (342)
T 1b6c_B          211 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLR  290 (342)
T ss_dssp             CCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC
T ss_pred             CCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhC
Confidence            4689999999998754      233689999999999999998          667754321     1111111111111


Q ss_pred             C-CCCCC----CchHHHHHHhhhcCCCCCCCCCHhhH-HHHHHHHH
Q 041728           63 M-LDPRL----PPDPLFDVAFSCLNGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        63 ~-~~~~~----~~~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      . .....    ....+.+++..||..||.+||++.++ ..|+.+..
T Consensus       291 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~  336 (342)
T 1b6c_B          291 PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  336 (342)
T ss_dssp             CCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence            1 11100    11458899999999999999999999 66666654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.69  E-value=8.5e-18  Score=100.18  Aligned_cols=97  Identities=19%  Similarity=0.139  Sum_probs=69.2

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh----cCCC-------------------
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH----LPIP-------------------   59 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------------------   59 (108)
                      ..||+.|+|||.+.. ..++.++|+||+|+++|++++|..||.+.........    ....                   
T Consensus       182 ~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
T 2b9h_A          182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIK  261 (353)
T ss_dssp             CCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHH
T ss_pred             ccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhh
Confidence            468999999998764 6688899999999999999999999976542211110    0000                   


Q ss_pred             -CC-------cCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           60 -LD-------EMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        60 -~~-------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                       ..       ....+..+ ..+.+++.+||..||.+||++.+++.+.++.
T Consensus       262 ~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  310 (353)
T 2b9h_A          262 SLPMYPAAPLEKMFPRVN-PKGIDLLQRMLVFDPAKRITAKEALEHPYLQ  310 (353)
T ss_dssp             TSCCCCCCCHHHHSTTSC-HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             cccCCCCcchhhhcccCC-HHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence             00       00012223 6789999999999999999999997666553

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.69  E-value=5.2e-17  Score=95.20  Aligned_cols=96  Identities=25%  Similarity=0.320  Sum_probs=66.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHh-------hhhcCCCCCcCCCCC---CC---c
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQF-------QLHLPIPLDEMLDPR---LP---P   70 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~---~~---~   70 (108)
                      ..|++.|+|||.+. +.++.++|+||+|+++|++++|..||........       .............+.   .+   .
T Consensus       195 ~~g~~~y~aPE~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (307)
T 2nru_A          195 IVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSV  273 (307)
T ss_dssp             CCSCGGGCCHHHHT-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHH
T ss_pred             cCCCcCcCChHHhc-CCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHH
Confidence            46899999999876 4578899999999999999999999875432110       000000001111111   11   1


Q ss_pred             hHHHHHHhhhcCCCCCCCCCHhhH-HHHHHH
Q 041728           71 DPLFDVAFSCLNGNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        71 ~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l  100 (108)
                      ..+.+++..||..+|.+||++.++ ..|+.+
T Consensus       274 ~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l  304 (307)
T 2nru_A          274 EAMYSVASQCLHEKKNKRPDIKKVQQLLQEM  304 (307)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            458899999999999999999999 666655

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.68  E-value=3.7e-17  Score=100.04  Aligned_cols=99  Identities=17%  Similarity=0.105  Sum_probs=64.5

Q ss_pred             cccccccceeccccc-ccCCCcccccchhhhHHHHHHHhCCCCCCcchhHH-----------------------------
Q 041728            2 TDILLEFMNFFEGLA-YTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ-----------------------------   51 (108)
Q Consensus         2 ~~~~~~~~~~ape~~-~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~-----------------------------   51 (108)
                      +..+||+.|+|||.+ ....++.++||||+||+++++++|..|+.......                             
T Consensus       209 ~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~q  288 (432)
T 3n9x_A          209 TSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQ  288 (432)
T ss_dssp             --CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHH
T ss_pred             cCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHH
Confidence            346789999999986 44668899999999999999997544433211000                             


Q ss_pred             --hh------------------------hhcCCCCC---cCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           52 --FQ------------------------LHLPIPLD---EMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        52 --~~------------------------~~~~~~~~---~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                        .+                        ........   ....+.++ ..+.+++.+||..||.+||++++++.+.++.
T Consensus       289 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~  366 (432)
T 3n9x_A          289 LNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSIS-DDGINLLESMLKFNPNKRITIDQALDHPYLK  366 (432)
T ss_dssp             HHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSC-HHHHHHHHHHSCSSTTTSCCHHHHHTCGGGT
T ss_pred             HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCC-HHHHHHHHHHhcCCcccCCCHHHHhcChhhh
Confidence              00                        00000000   00012233 6789999999999999999999997666554

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.68  E-value=1.2e-17  Score=97.45  Aligned_cols=97  Identities=12%  Similarity=0.031  Sum_probs=69.6

Q ss_pred             cccccceecccccc------cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCC--CCCchHHHH
Q 041728            4 ILLEFMNFFEGLAY------TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDP--RLPPDPLFD   75 (108)
Q Consensus         4 ~~~~~~~~ape~~~------~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~   75 (108)
                      ..|++.|+|||.+.      ...++.++|+|++|++++++++|..||.....................+  ...+..+.+
T Consensus       183 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  262 (298)
T 1phk_A          183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKD  262 (298)
T ss_dssp             CCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHH
T ss_pred             ccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHH
Confidence            46889999999874      3457789999999999999999999997655433322111111111111  112367999


Q ss_pred             HHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ++..||..||.+||++.+++.+.++
T Consensus       263 li~~~l~~dp~~Rps~~~ll~h~~~  287 (298)
T 1phk_A          263 LVSRFLVVQPQKRYTAEEALAHPFF  287 (298)
T ss_dssp             HHHHHCCSSGGGSCCHHHHTTSGGG
T ss_pred             HHHHHccCCcccCCCHHHHHhChHh
Confidence            9999999999999999999655544

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.68  E-value=7.6e-18  Score=102.22  Aligned_cols=99  Identities=13%  Similarity=0.150  Sum_probs=66.1

Q ss_pred             ccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchh------------HHhhh-hcCCC----CCcC-
Q 041728            3 DILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFF------------LQFQL-HLPIP----LDEM-   63 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~------------~~~~~-~~~~~----~~~~-   63 (108)
                      ..+||+.|+|||.+.. ..++.++||||+|+++|++++|..||.+...            ...+. .....    +... 
T Consensus       194 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~  273 (405)
T 3rgf_A          194 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIK  273 (405)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGG
T ss_pred             CceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhh
Confidence            3568999999999876 4488999999999999999999999964321            00000 00000    0000 


Q ss_pred             ---------------C------------CCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           64 ---------------L------------DPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        64 ---------------~------------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                                     .            ........+.+|+.+||..||.+||++++++.+.++.
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~  338 (405)
T 3rgf_A          274 KMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFL  338 (405)
T ss_dssp             GSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             cCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhc
Confidence                           0            0001135688999999999999999999997666653

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.68  E-value=1.1e-17  Score=104.82  Aligned_cols=87  Identities=16%  Similarity=0.069  Sum_probs=64.9

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchh----HHhhhhcCCCCCcCCCCCCCchHHHHHHh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF----LQFQLHLPIPLDEMLDPRLPPDPLFDVAF   78 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   78 (108)
                      ..+||+.|+|||.+.+..++.++|+||+|+++|++++|..||.+...    ......+...  ....+...+..+.+++.
T Consensus       348 ~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~  425 (543)
T 3c4z_A          348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ--AVTYPDKFSPASKDFCE  425 (543)
T ss_dssp             CCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC--CCCCCTTSCHHHHHHHH
T ss_pred             cccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc--ccCCCcccCHHHHHHHH
Confidence            35899999999999988899999999999999999999999976421    1111111111  11112223377999999


Q ss_pred             hhcCCCCCCCCCH
Q 041728           79 SCLNGNPESRLII   91 (108)
Q Consensus        79 ~c~~~~p~~Rp~~   91 (108)
                      +||..||.+||++
T Consensus       426 ~lL~~dP~~R~~~  438 (543)
T 3c4z_A          426 ALLQKDPEKRLGF  438 (543)
T ss_dssp             HHSCSSGGGSCCC
T ss_pred             HhccCCHhHCCCC
Confidence            9999999999976

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.68  E-value=7.8e-18  Score=102.56  Aligned_cols=96  Identities=15%  Similarity=0.001  Sum_probs=69.2

Q ss_pred             ccccccceecccccc-------cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC----CCcCCCCCCCch
Q 041728            3 DILLEFMNFFEGLAY-------TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP----LDEMLDPRLPPD   71 (108)
Q Consensus         3 ~~~~~~~~~ape~~~-------~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~   71 (108)
                      ..+||+.|+|||.+.       ...++.++|+||+|+++|++++|..||.+.+.......+...    ..+.....++ .
T Consensus       222 ~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s-~  300 (412)
T 2vd5_A          222 VAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVP-E  300 (412)
T ss_dssp             SCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCC-H
T ss_pred             eeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCC-H
Confidence            357999999999987       356889999999999999999999999876544433221111    0111122333 7


Q ss_pred             HHHHHHhhhcCCCCCCC---CCHhhHHHHHHH
Q 041728           72 PLFDVAFSCLNGNPESR---LIITLTDGLKRL  100 (108)
Q Consensus        72 ~~~~l~~~c~~~~p~~R---p~~~~l~~l~~l  100 (108)
                      ++.+++.+||. +|.+|   ++++++..+.++
T Consensus       301 ~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff  331 (412)
T 2vd5_A          301 EARDFIQRLLC-PPETRLGRGGAGDFRTHPFF  331 (412)
T ss_dssp             HHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGG
T ss_pred             HHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCc
Confidence            89999999998 99998   588888655554

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.68  E-value=7.8e-18  Score=105.97  Aligned_cols=96  Identities=16%  Similarity=0.097  Sum_probs=70.2

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchh----HHhhhhcCCCCCcCCCCCCCchHHHHHHh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF----LQFQLHLPIPLDEMLDPRLPPDPLFDVAF   78 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   78 (108)
                      ..+||+.|+|||.+....++.++|+||+|+++|++++|..||.....    .......... .......+ +..+.+++.
T Consensus       344 ~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~-~~~~p~~~-s~~~~dLI~  421 (576)
T 2acx_A          344 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-PEEYSERF-SPQARSLCS  421 (576)
T ss_dssp             CCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC-CCCCCTTS-CHHHHHHHH
T ss_pred             ccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc-cccCCccC-CHHHHHHHH
Confidence            45799999999999888899999999999999999999999976431    1111111111 11111223 377999999


Q ss_pred             hhcCCCCCCCC-----CHhhHHHHHHH
Q 041728           79 SCLNGNPESRL-----IITLTDGLKRL  100 (108)
Q Consensus        79 ~c~~~~p~~Rp-----~~~~l~~l~~l  100 (108)
                      +||..||.+|+     +++++..+.++
T Consensus       422 ~lL~~dP~~R~g~~~~sa~eil~HpfF  448 (576)
T 2acx_A          422 QLLCKDPAERLGCRGGSAREVKEHPLF  448 (576)
T ss_dssp             HHTCSSGGGSTTCSSSHHHHHHTSGGG
T ss_pred             HhccCCHHHcCCCCCCCHHHHHhChhh
Confidence            99999999999     67777655544

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.66  E-value=2.5e-17  Score=98.51  Aligned_cols=97  Identities=16%  Similarity=0.107  Sum_probs=67.5

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh------------------------cCC
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH------------------------LPI   58 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~   58 (108)
                      ..||+.|+|||.+.. ..++.++|+||+|+++|++++|..||.+.........                        ...
T Consensus       193 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (362)
T 3pg1_A          193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRN  272 (362)
T ss_dssp             ---CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTT
T ss_pred             ecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHh
Confidence            568899999998876 6688999999999999999999999976542211110                        000


Q ss_pred             CCCcC-------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           59 PLDEM-------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        59 ~~~~~-------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .....       ..+.. +..+.+++..||..||.+||++.+++.+.++.
T Consensus       273 ~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~  321 (362)
T 3pg1_A          273 SLSNVPARAWTAVVPTA-DPVALDLIAKMLEFNPQRRISTEQALRHPYFE  321 (362)
T ss_dssp             CCCCCCCCCHHHHSTTS-CHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGT
T ss_pred             hcccCChhhHHhhCCCC-CHHHHHHHHHHhcCChhhCCCHHHHHcCchhh
Confidence            00000       01122 25689999999999999999999997666554

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.66  E-value=3.9e-17  Score=96.41  Aligned_cols=96  Identities=13%  Similarity=0.060  Sum_probs=67.2

Q ss_pred             cccccceecccccc---cCCCcccccchhhhHHHHHHHhCCCCCCcchhH----HhhhhcCCCCCcCCCCCCCchHHHHH
Q 041728            4 ILLEFMNFFEGLAY---TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL----QFQLHLPIPLDEMLDPRLPPDPLFDV   76 (108)
Q Consensus         4 ~~~~~~~~ape~~~---~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l   76 (108)
                      ..||+.|+|||.+.   ...++.++|+||+|+++|++++|..||......    ..................+ ..+.++
T Consensus       176 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l  254 (322)
T 2ycf_A          176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS-EKALDL  254 (322)
T ss_dssp             HHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSC-HHHHHH
T ss_pred             ccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcC-HHHHHH
Confidence            45889999999874   456788999999999999999999998754321    1111111111111112223 679999


Q ss_pred             HhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           77 AFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      +..||..||.+||++.+++.+.++
T Consensus       255 i~~~l~~dP~~Rps~~~~l~h~~~  278 (322)
T 2ycf_A          255 VKKLLVVDPKARFTTEEALRHPWL  278 (322)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred             HHHHcccCHhhCCCHHHHhhCcCc
Confidence            999999999999999998654443

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.66  E-value=5.6e-18  Score=100.04  Aligned_cols=93  Identities=11%  Similarity=-0.016  Sum_probs=64.8

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcCC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLNG   83 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~   83 (108)
                      ..||+.|+|||.+....++.++|+||+|+++|++++|..++......  .........+....... ..+.+++..||..
T Consensus       236 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~  312 (332)
T 3qd2_B          236 QVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI--ITDVRNLKFPLLFTQKY-PQEHMMVQDMLSP  312 (332)
T ss_dssp             CC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHH--HHHHHTTCCCHHHHHHC-HHHHHHHHHHHCS
T ss_pred             cCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHH--HHHhhccCCCcccccCC-hhHHHHHHHHccC
Confidence            46999999999998888999999999999999999987665432211  11111111111111112 5578999999999


Q ss_pred             CCCCCCCHhhHHHHHH
Q 041728           84 NPESRLIITLTDGLKR   99 (108)
Q Consensus        84 ~p~~Rp~~~~l~~l~~   99 (108)
                      ||.+||++.+++.+.+
T Consensus       313 ~p~~Rps~~~~l~~~~  328 (332)
T 3qd2_B          313 SPTERPEATDIIENAI  328 (332)
T ss_dssp             SGGGSCCHHHHHHSTT
T ss_pred             CCCcCCCHHHHhhchh
Confidence            9999999999865443

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.66  E-value=9.8e-17  Score=94.27  Aligned_cols=90  Identities=13%  Similarity=0.039  Sum_probs=67.6

Q ss_pred             ccccccceecccccccCCCc-ccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKIT-EKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~-~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ...|++.|+|||.+....+. .++|+||+|+++|++++|..||........  . .    ...... .+..+.+++..||
T Consensus       197 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~-~----~~~~~~-~~~~~~~li~~~l  268 (312)
T 2iwi_A          197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILE--A-E----LHFPAH-VSPDCCALIRRCL  268 (312)
T ss_dssp             CCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH--T-C----CCCCTT-SCHHHHHHHHHHT
T ss_pred             ccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhh--h-c----cCCccc-CCHHHHHHHHHHc
Confidence            35688999999988766654 589999999999999999999976542211  1 0    011122 3377999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ..+|.+||++.+++.+.++
T Consensus       269 ~~~p~~Rps~~e~l~~~~~  287 (312)
T 2iwi_A          269 APKPSSRPSLEEILLDPWM  287 (312)
T ss_dssp             CSSTTTSCCHHHHHHSTTT
T ss_pred             cCChhhCcCHHHHhcChhh
Confidence            9999999999999654443

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.65  E-value=5.5e-17  Score=95.68  Aligned_cols=94  Identities=15%  Similarity=0.026  Sum_probs=64.1

Q ss_pred             ccccccceecccccc--------cCCCcccccchhhhHHHHHHHhCCCCCCcchh----HHhhh----hcCCCC------
Q 041728            3 DILLEFMNFFEGLAY--------TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFF----LQFQL----HLPIPL------   60 (108)
Q Consensus         3 ~~~~~~~~~ape~~~--------~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~----~~~~~----~~~~~~------   60 (108)
                      ...||+.|+|||.+.        ...++.++||||+|+++|++++|..||.....    .....    ......      
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  253 (319)
T 4euu_A          174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQK  253 (319)
T ss_dssp             CCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEEC
T ss_pred             ecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhc
Confidence            356899999999875        46788899999999999999999999863221    11110    000000      


Q ss_pred             --------C-cCCC-CCCC---chHHHHHHhhhcCCCCCCCCCHhhHHH
Q 041728           61 --------D-EMLD-PRLP---PDPLFDVAFSCLNGNPESRLIITLTDG   96 (108)
Q Consensus        61 --------~-~~~~-~~~~---~~~~~~l~~~c~~~~p~~Rp~~~~l~~   96 (108)
                              . .... ....   +..+.+++..||+.||.+||++++++.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~  302 (319)
T 4euu_A          254 AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (319)
T ss_dssp             STTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             ccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhh
Confidence                    0 0000 0111   145889999999999999999999843

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.64  E-value=7.7e-17  Score=95.31  Aligned_cols=100  Identities=13%  Similarity=0.005  Sum_probs=68.8

Q ss_pred             ccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhH-----------------HhhhhcC-------
Q 041728            3 DILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL-----------------QFQLHLP-------   57 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~-------   57 (108)
                      ...|++.|+|||.+.. ..++.++||||+|++++++++|..||......                 .......       
T Consensus       189 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (330)
T 3nsz_A          189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF  268 (330)
T ss_dssp             SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHH
T ss_pred             cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccch
Confidence            3568899999999876 56889999999999999999999998432100                 0000000       


Q ss_pred             ---------CCCCcCCC---CCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           58 ---------IPLDEMLD---PRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        58 ---------~~~~~~~~---~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                               ........   +...+..+.+++.+||..||.+||++++++++.++..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  325 (330)
T 3nsz_A          269 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT  325 (330)
T ss_dssp             HHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             hhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhh
Confidence                     00000000   1112367999999999999999999999976666543

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.64  E-value=5.6e-17  Score=97.07  Aligned_cols=96  Identities=15%  Similarity=0.088  Sum_probs=65.6

Q ss_pred             ccccccceeccccccc--CCCcccccchhhhHHHHHHHhCCCCCCcchh----HHhhhhcCCCCCcCCCCCCCchHHHHH
Q 041728            3 DILLEFMNFFEGLAYT--IKITEKYDVYSFGVLVLEVIKGKHPRDQMFF----LQFQLHLPIPLDEMLDPRLPPDPLFDV   76 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l   76 (108)
                      ...||+.|+|||.+..  ..++.++||||+|+++|++++|..||.....    .......... .....+.+ +..+.++
T Consensus       219 ~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~l  296 (355)
T 1vzo_A          219 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS-EPPYPQEM-SALAKDL  296 (355)
T ss_dssp             GGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC-CCCCCTTS-CHHHHHH
T ss_pred             CcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhcc-CCCCCccc-CHHHHHH
Confidence            3578999999999875  3467899999999999999999999864321    1111111011 11112223 3678999


Q ss_pred             HhhhcCCCCCCCC-----CHhhHHHHHHH
Q 041728           77 AFSCLNGNPESRL-----IITLTDGLKRL  100 (108)
Q Consensus        77 ~~~c~~~~p~~Rp-----~~~~l~~l~~l  100 (108)
                      +..||..||.+||     ++++++.+.++
T Consensus       297 i~~~L~~dP~~R~~~~~~s~~ell~h~~f  325 (355)
T 1vzo_A          297 IQRLLMKDPKKRLGCGPRDADEIKEHLFF  325 (355)
T ss_dssp             HHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred             HHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence            9999999999999     88888544443

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.64  E-value=9.2e-17  Score=93.73  Aligned_cols=93  Identities=17%  Similarity=0.119  Sum_probs=60.4

Q ss_pred             cccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcc-hhHHhhhhc---CCCCCcCCCCCCCchHHHHHHh
Q 041728            4 ILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQM-FFLQFQLHL---PIPLDEMLDPRLPPDPLFDVAF   78 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~   78 (108)
                      ..|++.|+|||.+... .++.++|+||+|+++|++++   |+... .........   ............ +..+.+++.
T Consensus       190 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~  265 (303)
T 1zy4_A          190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNK-MKVEKKIIR  265 (303)
T ss_dssp             ----CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTT-SHHHHHHHH
T ss_pred             CCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCccccccc-hHHHHHHHH
Confidence            4588999999998753 68899999999999999997   33322 211111111   111111122222 256899999


Q ss_pred             hhcCCCCCCCCCHhhHHHHHHH
Q 041728           79 SCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        79 ~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      .||..||.+||++.+++.+.++
T Consensus       266 ~~l~~dp~~Rps~~~ll~h~~~  287 (303)
T 1zy4_A          266 LLIDHDPNKRPGARTLLNSGWL  287 (303)
T ss_dssp             HHTCSSGGGSCCHHHHHHSSCS
T ss_pred             HHHhcCcccCcCHHHHhCCCCc
Confidence            9999999999999998654443

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.63  E-value=5.5e-16  Score=92.95  Aligned_cols=93  Identities=10%  Similarity=-0.102  Sum_probs=67.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+||+.|+|||.+.+..++.++||||+|+++|++++|..||.........  ..    .........+.+.+++..|+.
T Consensus       244 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~l~  317 (365)
T 3e7e_A          244 AKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK--PE----GLFRRLPHLDMWNEFFHVMLN  317 (365)
T ss_dssp             CSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE--EC----SCCTTCSSHHHHHHHHHHHHC
T ss_pred             eecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee--ec----hhccccCcHHHHHHHHHHHcC
Confidence            457999999999999888999999999999999999999998654321111  11    111111123668899999999


Q ss_pred             CCCCCC-CCHhhH-HHHHHHH
Q 041728           83 GNPESR-LIITLT-DGLKRLA  101 (108)
Q Consensus        83 ~~p~~R-p~~~~l-~~l~~l~  101 (108)
                      .+|.+| |++.++ ..++.+.
T Consensus       318 ~~p~~r~~~~~~l~~~l~~~l  338 (365)
T 3e7e_A          318 IPDCHHLPSLDLLRQKLKKVF  338 (365)
T ss_dssp             CCCTTCCCCHHHHHHHHHHHH
T ss_pred             CCCCCcchHHHHHHHHHHHHH
Confidence            999999 456766 5455443

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.59  E-value=3.3e-17  Score=99.23  Aligned_cols=99  Identities=12%  Similarity=0.011  Sum_probs=66.4

Q ss_pred             ccccccceeccccccc--------CCCcccccchhhhHHHHHHHhCCCCCCcchh----HHhhhhc-CCCCC--------
Q 041728            3 DILLEFMNFFEGLAYT--------IKITEKYDVYSFGVLVLEVIKGKHPRDQMFF----LQFQLHL-PIPLD--------   61 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~--------~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~--------   61 (108)
                      ...||+.|+|||.+..        ..++.++|+||+|+++|++++|..||.....    ....... .....        
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  253 (396)
T 4eut_A          174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQK  253 (396)
T ss_dssp             CSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEEC
T ss_pred             cccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhhee
Confidence            4568999999998764        4567889999999999999999999864221    1111100 00000        


Q ss_pred             ---------cCCC--CCCC---chHHHHHHhhhcCCCCCCCCCHhhH-HHHHHHH
Q 041728           62 ---------EMLD--PRLP---PDPLFDVAFSCLNGNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        62 ---------~~~~--~~~~---~~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l~  101 (108)
                               ....  ..+.   +..+.+++..||..||.+||+++++ ..+..+.
T Consensus       254 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il  308 (396)
T 4eut_A          254 AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (396)
T ss_dssp             STTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred             ccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence                     0000  1111   1358899999999999999999998 6555544

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.57  E-value=8e-16  Score=98.25  Aligned_cols=92  Identities=20%  Similarity=0.100  Sum_probs=62.2

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcch-hHHhhhh-------------cCCCCC---cC-C
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMF-FLQFQLH-------------LPIPLD---EM-L   64 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~~~~---~~-~   64 (108)
                      ...||+.|+|||.+....++.++|+||+|+++|++++|..||.... ...+...             ......   .. .
T Consensus       182 ~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp  261 (676)
T 3qa8_A          182 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLP  261 (676)
T ss_dssp             CCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSC
T ss_pred             cccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccC
Confidence            3578999999999988889999999999999999999999986432 1111000             000000   00 0


Q ss_pred             CC-CC---CchHHHHHHhhhcCCCCCCCCCHhhH
Q 041728           65 DP-RL---PPDPLFDVAFSCLNGNPESRLIITLT   94 (108)
Q Consensus        65 ~~-~~---~~~~~~~l~~~c~~~~p~~Rp~~~~l   94 (108)
                      .+ ..   .+..+.+++..||..||.+||++.++
T Consensus       262 ~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el  295 (676)
T 3qa8_A          262 TPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN  295 (676)
T ss_dssp             CSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred             CchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence            01 11   12568999999999999999999886

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.49  E-value=7.6e-14  Score=81.69  Aligned_cols=86  Identities=16%  Similarity=0.126  Sum_probs=57.5

Q ss_pred             cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCc--CCCC----CCCchHHHHHHhhhcCCCCCCCCCH
Q 041728           18 TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDE--MLDP----RLPPDPLFDVAFSCLNGNPESRLII   91 (108)
Q Consensus        18 ~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~l~~~c~~~~p~~Rp~~   91 (108)
                      ...++.++|+||+|+++|++++|..||..................  ...+    ...+..+.+++..||..||.+||++
T Consensus       172 ~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~  251 (299)
T 3m2w_A          172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI  251 (299)
T ss_dssp             TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCH
Confidence            356788999999999999999999999765433221111111100  0001    1223679999999999999999999


Q ss_pred             hhHHHHHHHHHH
Q 041728           92 TLTDGLKRLASF  103 (108)
Q Consensus        92 ~~l~~l~~l~~~  103 (108)
                      .+++.+.++...
T Consensus       252 ~e~l~hp~~~~~  263 (299)
T 3m2w_A          252 TEFMNHPWIMQS  263 (299)
T ss_dssp             HHHHTSHHHHTG
T ss_pred             HHHhcChhhccc
Confidence            999777777543

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.45  E-value=3.5e-14  Score=91.14  Aligned_cols=89  Identities=13%  Similarity=0.009  Sum_probs=61.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...||+.|++||.+... ++.++||||+|++++++++|..++.+...        ...............+.+++.+||.
T Consensus       236 ~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~--------~~~~~~~~~~~~~~~l~~li~~~l~  306 (681)
T 2pzi_A          236 YLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV--------DGLPEDDPVLKTYDSYGRLLRRAID  306 (681)
T ss_dssp             CCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC--------SSCCTTCHHHHHCHHHHHHHHHHTC
T ss_pred             ccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc--------ccccccccccccCHHHHHHHhhhcc
Confidence            45699999999988654 47899999999999999999887764321        0000000000012568899999999


Q ss_pred             CCCCCCCCH-hhH-HHHHHH
Q 041728           83 GNPESRLII-TLT-DGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp~~-~~l-~~l~~l  100 (108)
                      .||.+||+. +++ ..+..+
T Consensus       307 ~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          307 PDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             SSGGGSCSSHHHHHHHHHHH
T ss_pred             CChhhCCCHHHHHHHHHHHH
Confidence            999999964 444 444443

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.42  E-value=1.2e-13  Score=80.61  Aligned_cols=80  Identities=11%  Similarity=0.086  Sum_probs=55.9

Q ss_pred             CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---h-cCCCCC--cCCCCCCCchHHHHHHhhhcCCCCCCCCCHhh
Q 041728           20 KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---H-LPIPLD--EMLDPRLPPDPLFDVAFSCLNGNPESRLIITL   93 (108)
Q Consensus        20 ~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~--~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~   93 (108)
                      .++.++|+||+|+++|++++|..||.+........   . ......  ....+.++ ..+.+++.+||..||.+| ++.+
T Consensus       178 ~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dP~~R-s~~e  255 (286)
T 3uqc_A          178 DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIP-FQISAVAARSVQGDGGIR-SAST  255 (286)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSC-HHHHHHHHHHHCTTSSCC-CHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCC-HHHHHHHHHHcccCCccC-CHHH
Confidence            46789999999999999999999998654322111   0 011000  01113333 779999999999999999 9999


Q ss_pred             H-HHHHHHH
Q 041728           94 T-DGLKRLA  101 (108)
Q Consensus        94 l-~~l~~l~  101 (108)
                      + ..|..+.
T Consensus       256 l~~~L~~~~  264 (286)
T 3uqc_A          256 LLNLMQQAT  264 (286)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            9 6666654

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.88  E-value=7.8e-11  Score=69.95  Aligned_cols=89  Identities=11%  Similarity=-0.027  Sum_probs=56.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHH-HHHHHhCCCCCCcchh----HHhhhhcCCCCCcCCCCC---CCchHHHH
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVL-VLEVIKGKHPRDQMFF----LQFQLHLPIPLDEMLDPR---LPPDPLFD   75 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~   75 (108)
                      .+||+.|+|||.+.+.. +.++||||++.. .++++.|..||.+...    .......... .......   ..+.++.+
T Consensus       237 ~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~d  314 (336)
T 2vuw_A          237 VVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTF-KTKCNTPAMKQIKRKIQE  314 (336)
T ss_dssp             EECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCC-SSCCCSHHHHHHHHHHHH
T ss_pred             EEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhcc-CcccchhhhhhcCHHHHH
Confidence            47899999999998555 889999998766 5566778888865321    1111111010 1110010   01256899


Q ss_pred             HHhhhcCCCCCCCCCHhhHH-HHHH
Q 041728           76 VAFSCLNGNPESRLIITLTD-GLKR   99 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l~-~l~~   99 (108)
                      |+.+||+.|     ++++++ .+.+
T Consensus       315 li~~~L~~d-----sa~e~l~~Hp~  334 (336)
T 2vuw_A          315 FHRTMLNFS-----SATDLLCQHSL  334 (336)
T ss_dssp             HHHHGGGSS-----SHHHHHHHCGG
T ss_pred             HHHHHhccC-----CHHHHHhcCCC
Confidence            999999976     888876 5543

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=96.29  E-value=5.9e-05  Score=48.19  Aligned_cols=34  Identities=15%  Similarity=0.025  Sum_probs=13.9

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEV   37 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~   37 (108)
                      +.+||+.||+||.+. +.+...+|+|+.|+..+.+
T Consensus       398 t~vGTp~YmAPE~l~-g~~~~~~d~~s~g~~~~~l  431 (569)
T 4azs_A          398 NLVQSFFVFVNELFA-ENKSWNGFWRSAPVHPFNL  431 (569)
T ss_dssp             HHHHHHHHHHHHHC------------------CCC
T ss_pred             CceechhhccHHHhC-CCCCCcccccccccchhhh
Confidence            467999999999986 4566788999999876544

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=95.16  E-value=0.0012  Score=42.09  Aligned_cols=42  Identities=10%  Similarity=0.127  Sum_probs=33.3

Q ss_pred             ccccccceeccccccc--CCCcccccchhhhHHHHHHHhCCCCC
Q 041728            3 DILLEFMNFFEGLAYT--IKITEKYDVYSFGVLVLEVIKGKHPR   44 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~   44 (108)
                      .+.||+.|||||.+..  ..|+..+|+|+..+-..+....+.+|
T Consensus       495 ~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          495 AVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             hhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            4679999999999976  55777889999888877776655554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	108
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	6e-10
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-09
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-08
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-08
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-07
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	6e-07
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	8e-07
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	9e-07
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-06
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-06
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-06
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-06
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-06
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-06
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	6e-06
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	6e-06
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	7e-06
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	9e-06
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	9e-06
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-05
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-05
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-05
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-05
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-05
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-05
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-05
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-05
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-05
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-05
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	5e-05
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-05
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	7e-05
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	8e-05
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-04
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-04
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-04
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-04
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-04
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-04
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-04
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-04
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-04
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-04
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	5e-04
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	6e-04
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	6e-04
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	8e-04
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	0.003

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 6e-10
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFS 79
           K T K DV+SFGVL+ E++    P              +    +L P   PDPL++V   
Sbjct: 210 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLK 269

Query: 80  CLNGNPESRLIITLTDGLKRLASFL 104
           C +   E R   + ++ + R+++  
Sbjct: 270 CWHPKAEMR--PSFSELVSRISAIF 292

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 3e-09
 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFS 79
           + + K DV+SFGVL+ EV        +       +        +  PRL    ++ +   
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNH 237

Query: 80  CLNGNPESRLIITLTDGLKRL 100
           C    PE R     +  L++L
Sbjct: 238 CWKERPEDR--PAFSRLLRQL 256

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 2e-08
 Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 10/87 (11%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHP------RDQMFFLQFQLHLPIPLDEMLDPRLPPDPL 73
             + + DVY+FG+++ E++ G+ P      RDQ+ F+  + +L   L ++      P  +
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV--RSNCPKAM 242

Query: 74  FDVAFSCLNGNPESRLIITLTDGLKRL 100
             +   CL    + R        L  +
Sbjct: 243 KRLMAECLKKKRDER--PLFPQILASI 267

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (111), Expect = 5e-08
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 2/85 (2%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFS 79
             T K DV+SFG+L+ E++               +        M+ P   P+ L+ +   
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL 245

Query: 80  CLNGNPESRLIITLTDGLKRLASFL 104
           C    PE R   T       L  F 
Sbjct: 246 CWKERPEDR--PTFDYLRSVLEDFF 268

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 3e-07
 Identities = 20/99 (20%), Positives = 31/99 (31%), Gaps = 11/99 (11%)

Query: 16  AYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFD 75
               K T   DV+SFG+++ EV+               +        +  P   P  ++ 
Sbjct: 185 ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQ 244

Query: 76  VAFSCLNGNPESRL-----------IITLTDGLKRLASF 103
           +   C       R            +I   D LK LA F
Sbjct: 245 LMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADF 283

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 6e-07
 Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHP-RDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAF 78
           K  E  DVY+FG+ +LE+   ++P  +     Q    +   +      ++    + ++  
Sbjct: 188 KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIE 247

Query: 79  SCLNGNPESRL 89
            C+  N + R 
Sbjct: 248 GCIRQNKDERY 258

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 8e-07
 Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 6/82 (7%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHP---RDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDV 76
            ++   D++S G LV  ++ G +P         ++  ++     DE     +  +   D 
Sbjct: 179 VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIE-AMDF 237

Query: 77  AFSCLNGNPESRLIITLTDGLK 98
               L    +SR  +T ++ L+
Sbjct: 238 VDRLLVKERKSR--MTASEALQ 257

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (102), Expect = 9e-07
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHP-RDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAF 78
               K D++S G++ +E+I+G+ P  ++       L       E+ +P        D   
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 251

Query: 79  SCLNGNPESRL 89
            CL+ + E R 
Sbjct: 252 RCLDMDVEKRG 262

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 1e-06
 Identities = 21/85 (24%), Positives = 30/85 (35%), Gaps = 2/85 (2%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFS 79
           + T K DV+SFG+L+ E+             +  L        M  P   P+ L D+   
Sbjct: 190 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 249

Query: 80  CLNGNPESRLIITLTDGLKRLASFL 104
           C    PE R   T       L  + 
Sbjct: 250 CWRKEPEER--PTFEYLQAFLEDYF 272

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 1e-06
 Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 1/70 (1%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFS 79
              EK D++S G L+ E+     P       +    +       +  R   + L ++   
Sbjct: 190 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDE-LNEIITR 248

Query: 80  CLNGNPESRL 89
            LN     R 
Sbjct: 249 MLNLKDYHRP 258

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 1e-06
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 20  KITEKYDVYSFGVLVLEVI-KGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAF 78
           K + K D+++FGVL+ E+   GK P ++    +   H+   L  +  P L  + ++ + +
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-RLYRPHLASEKVYTIMY 235

Query: 79  SCLNGNPESRLIITLTDGLKRL 100
           SC +   + R   T    L  +
Sbjct: 236 SCWHEKADER--PTFKILLSNI 255

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (97), Expect = 3e-06
 Identities = 18/89 (20%), Positives = 30/89 (33%), Gaps = 2/89 (2%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFS 79
             T   DV+S+GVL+ E++                        +  P    D ++D+   
Sbjct: 202 VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQ 261

Query: 80  CLNGNPESRLIITLTDGLKRLASFLLKKK 108
           C    P  R   +    L  L   L ++K
Sbjct: 262 CWREKPYER--PSFAQILVSLNRMLEERK 288

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 4e-06
 Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 20  KITEKYDVYSFGVLVLEVI-KGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAF 78
           K + K DV+SFG+L+ E+   G+ P  ++        +            PP  +++V  
Sbjct: 176 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPA-VYEVMK 234

Query: 79  SCLNGNPESRLIITLTDGLKRL 100
           +C + +   R   +     ++L
Sbjct: 235 NCWHLDAAMR--PSFLQLREQL 254

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.2 bits (96), Expect = 5e-06
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 2/85 (2%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFS 79
           K + K DV++FGVL+ E+            L     L      M  P   P+ ++++  +
Sbjct: 192 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 251

Query: 80  CLNGNPESRLIITLTDGLKRLASFL 104
           C   NP  R   +  +  +   +  
Sbjct: 252 CWQWNPSDR--PSFAEIHQAFETMF 274

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 6e-06
 Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 4/90 (4%)

Query: 20  KITEKYDVYSFGVLVLEVI-KGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAF 78
           + T   DV+ FGV + E++  G  P   +        +       + P  PP  L+ +  
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT-LYSLMT 243

Query: 79  SCLNGNPESRLIITLTDGLKRLASFLLKKK 108
            C   +P  R     T+   +L++ L ++K
Sbjct: 244 KCWAYDPSRR--PRFTELKAQLSTILEEEK 271

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (95), Expect = 6e-06
 Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 16/92 (17%)

Query: 20  KITEKYDVYSFGVLVLEVI-------KGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDP 72
           K T   DV+S+G+++ EV+            +D +  ++    LP P+D        P  
Sbjct: 209 KFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDC-------PSA 261

Query: 73  LFDVAFSCLNGNPESRLIITLTDGLKRLASFL 104
           L  +   C   +   R        +  L   +
Sbjct: 262 LHQLMLDCWQKDRNHR--PKFGQIVNTLDKMI 291

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 7e-06
 Identities = 15/101 (14%), Positives = 33/101 (32%), Gaps = 22/101 (21%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP------------LDEMLDPR 67
           +  ++ D+Y+ G++  E+ +           Q   +  +P             ++ L P 
Sbjct: 194 ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPN 253

Query: 68  LPPDP--------LFDVAFSCLNGNPESRLIITLTDGLKRL 100
           +P           +  +   C   N  +R  +T     K L
Sbjct: 254 IPNRWQSCEALRVMAKIMRECWYANGAAR--LTALRIKKTL 292

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 9e-06
 Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 1/71 (1%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ-FQLHLPIPLDEMLDPRLPPDPLFDVAF 78
               K DV+S G+ ++E+ + + P  ++  ++            +  P        D   
Sbjct: 191 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLK 250

Query: 79  SCLNGNPESRL 89
            CL  N ++R 
Sbjct: 251 KCLEKNVDARW 261

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 40.4 bits (94), Expect = 9e-06
 Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 4/73 (5%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHP---RDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDV 76
            +    D+++ GVL   ++ G  P    D +  LQ         DE     + P+   D 
Sbjct: 204 PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPE-AKDF 262

Query: 77  AFSCLNGNPESRL 89
             + L   P  RL
Sbjct: 263 IKNLLQKEPRKRL 275

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (94), Expect = 1e-05
 Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 2/75 (2%)

Query: 15  LAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLF 74
           +       EK D++S GVL  E + GK P +   +   + +  I   E   P    +   
Sbjct: 175 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--ETYKRISRVEFTFPDFVTEGAR 232

Query: 75  DVAFSCLNGNPESRL 89
           D+    L  NP  R 
Sbjct: 233 DLISRLLKHNPSQRP 247

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 40.4 bits (94), Expect = 1e-05
 Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 4/73 (5%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHP---RDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDV 76
            +    D++S GVL   ++ G  P    +    L+        +D+     +  D   D 
Sbjct: 201 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISED-GKDF 259

Query: 77  AFSCLNGNPESRL 89
               L  +P +R+
Sbjct: 260 IRKLLLADPNTRM 272

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 1e-05
 Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPI-PLDEMLDPRLPPDPLFDVAF 78
             T + DV+S+G+ + E+            +  + +  I     ML P   P  ++D+  
Sbjct: 223 VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK 282

Query: 79  SCLNGNPESRLIITLTDGLKRL 100
           +C + +P  R   T    ++ +
Sbjct: 283 TCWDADPLKR--PTFKQIVQLI 302

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.8 bits (92), Expect = 1e-05
 Identities = 12/73 (16%), Positives = 30/73 (41%)

Query: 16  AYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFD 75
            +  + T + DV+++GV++ E+             +  ++     + +  P   P  L++
Sbjct: 214 IFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYN 273

Query: 76  VAFSCLNGNPESR 88
           +   C +  P  R
Sbjct: 274 LMRLCWSKLPADR 286

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 2e-05
 Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 4/88 (4%)

Query: 20  KITEKYDVYSFGVLVLEVI-KGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAF 78
           K + + DV+S+GV + E +  G+ P  +M   +    +         P  PP+ L+ +  
Sbjct: 188 KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPE-LYALMS 246

Query: 79  SCLNGNPESRLIITLTDGLKRLASFLLK 106
            C     E R         +R+ +    
Sbjct: 247 DCWIYKWEDR--PDFLTVEQRMRACYYS 272

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 39.7 bits (92), Expect = 2e-05
 Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 4/73 (5%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHP---RDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDV 76
              ++ D++S GV++  ++ G  P   R QM  L+  +                  + D+
Sbjct: 191 GYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT-VKDL 249

Query: 77  AFSCLNGNPESRL 89
               L   P+ R 
Sbjct: 250 VSRFLVVQPQKRY 262

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.6 bits (92), Expect = 2e-05
 Identities = 16/70 (22%), Positives = 27/70 (38%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFS 79
           +   K DV+S G+  +E+ + K P   M  +    H+       L      +   +   S
Sbjct: 190 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDS 249

Query: 80  CLNGNPESRL 89
           CL   P+ R 
Sbjct: 250 CLQKIPQDRP 259

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.2 bits (91), Expect = 2e-05
 Identities = 12/73 (16%), Positives = 23/73 (31%), Gaps = 4/73 (5%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHP---RDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDV 76
             ++  D +S GV+   ++ G  P    +     +  L      D      +      D 
Sbjct: 185 PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS-AKDF 243

Query: 77  AFSCLNGNPESRL 89
               +  +PE R 
Sbjct: 244 IRHLMEKDPEKRF 256

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 39.0 bits (90), Expect = 3e-05
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 4/72 (5%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHP---RDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDV 76
            +  + DVYS G ++ EV+ G+ P      +      +             L  D L  V
Sbjct: 190 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSAD-LDAV 248

Query: 77  AFSCLNGNPESR 88
               L  NPE+R
Sbjct: 249 VLKALAKNPENR 260

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 4e-05
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 1/69 (1%)

Query: 22  TEKYDVYSFGVLVLEVIKGKHPRDQMF-FLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSC 80
            E  DV+S G+++  ++ G+ P DQ     Q           +   +        +    
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 243

Query: 81  LNGNPESRL 89
           L  NP +R+
Sbjct: 244 LVENPSARI 252

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 5e-05
 Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 4/86 (4%)

Query: 20  KITEKYDVYSFGVLVLEVI-KGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAF 78
             T + DV+S+GV V E++  G  P D +   +    L         P    D ++ +  
Sbjct: 189 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID-VYMIMV 247

Query: 79  SCLNGNPESRLIITLTDGLKRLASFL 104
            C   + +SR      + +   +   
Sbjct: 248 KCWMIDADSR--PKFRELIIEFSKMA 271

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 5e-05
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFS 79
             T + DV+SFGVL+ E+            ++    L      M  P    + L+ +   
Sbjct: 213 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD 272

Query: 80  CLNGNPESRLIITLTDGLKRL 100
           C +  P  R   T    ++ L
Sbjct: 273 CWHAVPSQR--PTFKQLVEDL 291

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 7e-05
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFS 79
           K     D +SFGVL+ E++ G+ P       + +L   I +D    PR       D+   
Sbjct: 179 KYNHSVDWWSFGVLLYEMLIGQSPFHGQD--EEELFHSIRMDNPFYPRWLEKEAKDLLVK 236

Query: 80  CLNGNPESRL 89
                PE RL
Sbjct: 237 LFVREPEKRL 246

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 8e-05
 Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 13  EGLAYTIKITEKYDVYSFGVLVLEVI-KGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPD 71
                T   +   D + FGV + E+   G+ P   +   Q    +    + +  P   P 
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ 242

Query: 72  PLFDVAFSCLNGNPESR 88
            +++V   C    PE R
Sbjct: 243 DIYNVMVQCWAHKPEDR 259

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 1e-04
 Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 4/92 (4%)

Query: 16  AYTIKITEKYDVYSFGVLVLEVI-KGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLF 74
               K + K DV+SFGVL+ E    G+ P   M   +    L            P + ++
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPRE-MY 240

Query: 75  DVAFSCLNGNPESRLIITLTDGLKRLASFLLK 106
           D+   C   + E+R          RL ++   
Sbjct: 241 DLMNLCWTYDVENR--PGFAAVELRLRNYYYD 270

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 1e-04
 Identities = 11/73 (15%), Positives = 25/73 (34%), Gaps = 4/73 (5%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHP---RDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDV 76
            +  + D++S GV+   ++ G  P     +   L     +    ++            D 
Sbjct: 192 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL-AKDF 250

Query: 77  AFSCLNGNPESRL 89
               L  +P+ R+
Sbjct: 251 IRRLLVKDPKKRM 263

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 1e-04
 Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 8/73 (10%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHP---RDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDV 76
              +  D+++ G ++ +++ G  P    ++    Q  + L     E   P+       D+
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-----ARDL 240

Query: 77  AFSCLNGNPESRL 89
               L  +   RL
Sbjct: 241 VEKLLVLDATKRL 253

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 1e-04
 Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 8/77 (10%)

Query: 13  EGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDP 72
           E + Y         V+S G+L+ +++ G  P        F+    I   ++   +     
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--------FEHDEEIIRGQVFFRQRVSSE 230

Query: 73  LFDVAFSCLNGNPESRL 89
              +   CL   P  R 
Sbjct: 231 CQHLIRWCLALRPSDRP 247

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 1e-04
 Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 3/86 (3%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLD-PRLPPDPLFDVAF 78
             T + DV+SFGVL+ E+            +  +    +     +  P      ++    
Sbjct: 212 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 271

Query: 79  SCLNGNPESRLIITLTDGLKRLASFL 104
            C +G P  R   T ++ ++ L + L
Sbjct: 272 DCWHGEPSQR--PTFSELVEHLGNLL 295

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 2e-04
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 2/81 (2%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFS 79
             T   DV+SFGV++ E+        Q    +  L   +    +  P   PD LF++   
Sbjct: 211 VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM 270

Query: 80  CLNGNPESRLIITLTDGLKRL 100
           C   NP+ R   +  + +  +
Sbjct: 271 CWQYNPKMR--PSFLEIISSI 289

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 2e-04
 Identities = 17/98 (17%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 13  EGLAYTIKITEKYDVYSFGVLVLEVIKGKHP---RDQMFFLQFQLHLPIPLDEMLDPRLP 69
           E L      +   D++S G +  E++  +       ++  L          DE++ P + 
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231

Query: 70  PDPLFDVAFSCLNGNPESRLIITLTDGLKRLASFLLKK 107
             P +  +F        S+++  L +  + L S +L  
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHY 269

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.4 bits (83), Expect = 2e-04
 Identities = 10/77 (12%), Positives = 26/77 (33%), Gaps = 10/77 (12%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRD--------QMFFLQFQLHLPIPLDEMLDPRLPPD 71
           + + + D+ S G +++    G  P          Q +    +  +  P++  L    P +
Sbjct: 189 EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV-LCKGYPSE 247

Query: 72  PLFDVAFSCLNGNPESR 88
                   C +   + +
Sbjct: 248 -FATYLNFCRSLRFDDK 263

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 2e-04
 Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 3/86 (3%)

Query: 20  KITEKYDVYSFGVLVLEVI-KGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAF 78
             T K DV+S+G+L+ E+   G +P   +        L     +M  P    + ++ +  
Sbjct: 242 IYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQ 301

Query: 79  SCLNGNPESRLIITLTDGLKRLASFL 104
           SC   +   R   +  +    L   L
Sbjct: 302 SCWAFDSRKR--PSFPNLTSFLGCQL 325

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 35.9 bits (82), Expect = 3e-04
 Identities = 15/84 (17%), Positives = 31/84 (36%), Gaps = 11/84 (13%)

Query: 12  FEGLAYTIKITEKYDVYSFGVLVLEVIKGKHP------RDQMFFLQFQLHLPIPLDEMLD 65
            E L   +      D +S G ++ ++++G  P      +D+    +  L + + L +   
Sbjct: 174 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFS 233

Query: 66  PRLPPDPLFDVAFSCLNGNPESRL 89
           P      L  +    L  +   RL
Sbjct: 234 P-----ELRSLLEGLLQRDVNRRL 252

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 5e-04
 Identities = 16/111 (14%), Positives = 33/111 (29%), Gaps = 18/111 (16%)

Query: 15  LAYTIKITEKYDVYSFGVLVLEVIKGKHP------------------RDQMFFLQFQLHL 56
                  + + D++S G+ ++E+  G++P                   D           
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 233

Query: 57  PIPLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLASFLLKK 107
             PL        PP  +F++    +N  P        +   +   +  L K
Sbjct: 234 GRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK 284

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 35.2 bits (80), Expect = 6e-04
 Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 3/98 (3%)

Query: 13  EGLAYTIKITEKYDVYSFGVLVLEVIKGKHP---RDQMFFLQFQLHLPIPLDEMLDPRLP 69
           + L  + K +   D++S G +  E++ G        +   L     +    +    P + 
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT 229

Query: 70  PDPLFDVAFSCLNGNPESRLIITLTDGLKRLASFLLKK 107
             P +D  F+     P    +  L +    L S +LK 
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKL 267

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 35.2 bits (80), Expect = 6e-04
 Identities = 14/94 (14%), Positives = 32/94 (34%), Gaps = 15/94 (15%)

Query: 20  KITEKYDVYSFGVLVLEVIKGKHPRD--------QMFFLQFQLHLPIPLDEMLDPRLPPD 71
           + + + D+ + G + +  ++G  P          Q +    +     PL E+      P+
Sbjct: 189 EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL--CAGFPE 246

Query: 72  PLFDVAFSCLNGNPESR-----LIITLTDGLKRL 100
             +       N   ++      L    +  L+RL
Sbjct: 247 EFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 280

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (79), Expect = 8e-04
 Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 2/85 (2%)

Query: 7   EFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHP--RDQMFFLQFQLHLPIPLDEML 64
           E+M             +  D +S GVL+ E++ G  P   D     Q ++   I   E  
Sbjct: 195 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP 254

Query: 65  DPRLPPDPLFDVAFSCLNGNPESRL 89
            P+       D+    L  +P+ RL
Sbjct: 255 YPQEMSALAKDLIQRLLMKDPKKRL 279

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.3 bits (75), Expect = 0.003
 Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 11/97 (11%)

Query: 17  YTIKITEKYDVYSFGVLVLEVIKGKHP------RDQMFFLQFQLHLPIPLDEMLDPRLPP 70
                    D++S G +  E+ + K         DQ+  +   + LP   D   D  LP 
Sbjct: 188 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 247

Query: 71  DPLFDVAFSCLNGNPESRLIITLTDGLKRLASFLLKK 107
                 AF   +  P  + +  + +  K L    L  
Sbjct: 248 Q-----AFHSKSAQPIEKFVTDIDELGKDLLLKCLTF 279

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	108
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.92
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.91
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.91
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.91
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.9
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.9
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.9
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.9
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.9
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.9
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.9
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.9
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.89
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.89
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.89
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.89
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.89
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.89
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.89
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.89
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.88
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.88
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.88
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.88
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.88
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.88
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.88
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.87
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.87
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.86
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.86
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.86
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.86
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.86
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.85
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.85
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.85
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.84
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.84
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.84
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.84
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.84
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.83
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.83
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.81
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.81
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.8
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.79
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.79
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.78
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.76
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.76
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.75
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.74
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.72
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.72
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.71
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.68
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.67
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.64
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.64

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.3e-26  Score=131.21  Aligned_cols=95  Identities=15%  Similarity=0.037  Sum_probs=73.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+||+.|||||.+....++.++||||+|+++|++++|..||.+.+.......+...........++ +++.+++.+||+
T Consensus       173 ~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~s-~~l~~li~~~L~  251 (269)
T d2java1         173 AFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS-DELNEIITRMLN  251 (269)
T ss_dssp             ---CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSC-HHHHHHHHHHTC
T ss_pred             cCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcccC-HHHHHHHHHHcC
Confidence            4679999999999988889999999999999999999999998776554443322222222223333 789999999999


Q ss_pred             CCCCCCCCHhhHHHHH
Q 041728           83 GNPESRLIITLTDGLK   98 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~   98 (108)
                      .||.+||+++|++++.
T Consensus       252 ~dp~~Rps~~ell~hp  267 (269)
T d2java1         252 LKDYHRPSVEEILENP  267 (269)
T ss_dssp             SSGGGSCCHHHHHTST
T ss_pred             CChhHCcCHHHHHhCC
Confidence            9999999999986544

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.3e-25  Score=128.52  Aligned_cols=101  Identities=17%  Similarity=0.154  Sum_probs=78.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ...||+.|||||.+....++.++||||+|+++|++++ |..||.+....+....+..+......+.+ +.++.+++..||
T Consensus       171 ~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~-~~~l~~li~~cl  249 (285)
T d1u59a_         171 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPEC-PPELYALMSDCW  249 (285)
T ss_dssp             SSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTC-CHHHHHHHHHTT
T ss_pred             ccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcC-CHHHHHHHHHHc
Confidence            3568899999999988899999999999999999997 89999877655444433333222222333 478999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRLASFL  104 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l~~~~  104 (108)
                      ..+|++||++.+| ..|+.+...+
T Consensus       250 ~~~p~~RPs~~~i~~~L~~~~~~~  273 (285)
T d1u59a_         250 IYKWEDRPDFLTVEQRMRACYYSL  273 (285)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CCCHhHCcCHHHHHHHHHHHHHHh
Confidence            9999999999999 6666655433

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.4e-25  Score=127.39  Aligned_cols=96  Identities=23%  Similarity=0.202  Sum_probs=74.7

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..||+.|||||.+....++.++||||+|+++|++++ |..||.+....+....+..+.. ...|...+.++.+++..||.
T Consensus       170 ~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~-~~~p~~~~~~~~~li~~cl~  248 (277)
T d1xbba_         170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER-MGCPAGCPREMYDLMNLCWT  248 (277)
T ss_dssp             -CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTC
T ss_pred             cCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCC-CCCCcccCHHHHHHHHHHcC
Confidence            568999999999998889999999999999999997 8999987765544443333222 22233344889999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l  100 (108)
                      .||.+||++++| ..|+..
T Consensus       249 ~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         249 YDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             SSTTTSCCHHHHHHHHHHH
T ss_pred             CCHhHCcCHHHHHHHhhCH
Confidence            999999999999 555543

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=5.2e-25  Score=126.59  Aligned_cols=101  Identities=16%  Similarity=0.244  Sum_probs=74.7

Q ss_pred             ccccccceeccccccc---CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh-hcC----CCCCcCCCCCCCchHHH
Q 041728            3 DILLEFMNFFEGLAYT---IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL-HLP----IPLDEMLDPRLPPDPLF   74 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~   74 (108)
                      ...||+.|||||.+..   ..|+.++||||+|+++|++++|+.||.+........ ...    ..........++ ..+.
T Consensus       165 ~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~l~  243 (276)
T d1uwha_         165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP-KAMK  243 (276)
T ss_dssp             -CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCC-HHHH
T ss_pred             ccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccch-HHHH
Confidence            4679999999999864   457889999999999999999999998654332221 111    111111223333 7899


Q ss_pred             HHHhhhcCCCCCCCCCHhhH-HHHHHHHHHH
Q 041728           75 DVAFSCLNGNPESRLIITLT-DGLKRLASFL  104 (108)
Q Consensus        75 ~l~~~c~~~~p~~Rp~~~~l-~~l~~l~~~~  104 (108)
                      +++..||..||.+|||+++| ..|+.+...+
T Consensus       244 ~li~~cl~~dp~~RPt~~~il~~Le~l~~~~  274 (276)
T d1uwha_         244 RLMAECLKKKRDERPLFPQILASIELLARSL  274 (276)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHHHcC
Confidence            99999999999999999999 7777776544

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=8e-25  Score=125.04  Aligned_cols=98  Identities=17%  Similarity=0.140  Sum_probs=78.2

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...||+.|||||++.+..++.++||||+|+++|++++|+.||.+.+.......+.....  ..|...+.++.+++..||.
T Consensus       163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~~L~  240 (263)
T d2j4za1         163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLK  240 (263)
T ss_dssp             ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC--CCCTTSCHHHHHHHHHHTC
T ss_pred             ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--CCCccCCHHHHHHHHHHcc
Confidence            46799999999999988899999999999999999999999987665444433222211  1223334789999999999


Q ss_pred             CCCCCCCCHhhHHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      .||.+|||++|++++.++..
T Consensus       241 ~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         241 HNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             SSGGGSCCHHHHHTCHHHHH
T ss_pred             CCHhHCcCHHHHHcCcCcCC
Confidence            99999999999987777754

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=1.7e-24  Score=125.66  Aligned_cols=98  Identities=17%  Similarity=0.211  Sum_probs=74.9

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..||+.|||||.+....++.++||||+|+++|++++ |..||.+.........+..... ...+...+..+.+++..||+
T Consensus       193 ~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~l~~li~~cl~  271 (299)
T d1jpaa_         193 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYR-LPPPMDCPSALHQLMLDCWQ  271 (299)
T ss_dssp             ---CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTC
T ss_pred             ccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-CCCCccchHHHHHHHHHHcC
Confidence            357889999999988899999999999999999998 8999987765554443333222 22233334789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      .||.+||++++| ..|+.+..
T Consensus       272 ~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         272 KDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             SSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCHhHCcCHHHHHHHHHHHhc
Confidence            999999999999 66766543

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=9.4e-25  Score=124.77  Aligned_cols=98  Identities=22%  Similarity=0.308  Sum_probs=73.5

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..||+.|+|||.+....++.++||||+|+++|++++ |.+++............... .+...|...+.++.+++..||+
T Consensus       162 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~  240 (263)
T d1sm2a_         162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWK  240 (263)
T ss_dssp             ---CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHT-CCCCCCTTSCHHHHHHHHHHTC
T ss_pred             eecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhc-CCCCCccccCHHHHHHHHHHcc
Confidence            568899999999998999999999999999999998 56666655443333322222 2233344555889999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      .||.+||++++| ..|+.|..
T Consensus       241 ~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         241 ERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCHhHCcCHHHHHHHHHHHHh
Confidence            999999999999 66666653

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.6e-24  Score=124.34  Aligned_cols=99  Identities=18%  Similarity=0.180  Sum_probs=75.8

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ...||+.|+|||.+....++.++||||+|+++|++++ |..|+.+.........+.........+.++ ..+.+++..||
T Consensus       168 ~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~li~~cl  246 (273)
T d1mp8a_         168 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCP-PTLYSLMTKCW  246 (273)
T ss_dssp             ---CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCC-HHHHHHHHHHT
T ss_pred             ceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC-HHHHHHHHHHc
Confidence            4568899999999998899999999999999999987 899998776554444333332222333444 78999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      ..||.+||++++| ..|+.+..
T Consensus       247 ~~dp~~Rps~~ei~~~L~~i~~  268 (273)
T d1mp8a_         247 AYDPSRRPRFTELKAQLSTILE  268 (273)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCHhHCcCHHHHHHHHHHHHH
Confidence            9999999999999 66666543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.2e-24  Score=122.49  Aligned_cols=99  Identities=17%  Similarity=0.210  Sum_probs=77.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+|+.|+|||.+.+..++.++||||||+++|++++ |..|+......+....+.........+.. +.++.+++..||.
T Consensus       160 ~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~li~~cl~  238 (262)
T d1byga_         160 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGC-PPAVYEVMKNCWH  238 (262)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTC-CHHHHHHHHHHTC
T ss_pred             ccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccC-CHHHHHHHHHHcc
Confidence            567889999999988899999999999999999998 78888776555544444443333333333 3789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLASF  103 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~~  103 (108)
                      .||.+||++.+| ..|+.+++.
T Consensus       239 ~dP~~Rps~~~l~~~L~~i~~~  260 (262)
T d1byga_         239 LDAAMRPSFLQLREQLEHIKTH  260 (262)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cCHhHCcCHHHHHHHHHHHHhC
Confidence            999999999999 777777654

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=8.6e-25  Score=125.31  Aligned_cols=96  Identities=15%  Similarity=0.107  Sum_probs=71.8

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhh-hhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQ-LHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..+||+.|||||.+. ..++.++||||+|+++|++++|+.||.+....... ........+...+.....++.+++.+||
T Consensus       172 ~~~GT~~Y~aPE~~~-~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l  250 (270)
T d1t4ha_         172 AVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCI  250 (270)
T ss_dssp             ESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHS
T ss_pred             CcccCccccCHHHhC-CCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHHHc
Confidence            467999999999886 56999999999999999999999999765433222 2222222222222223367999999999


Q ss_pred             CCCCCCCCCHhhHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKR   99 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~   99 (108)
                      ..||++|||++|++.+.+
T Consensus       251 ~~dp~~R~s~~ell~Hp~  268 (270)
T d1t4ha_         251 RQNKDERYSIKDLLNHAF  268 (270)
T ss_dssp             CSSGGGSCCHHHHHTSGG
T ss_pred             cCCHhHCcCHHHHhCCcc
Confidence            999999999999965544

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=1.3e-24  Score=126.56  Aligned_cols=99  Identities=16%  Similarity=0.127  Sum_probs=75.3

Q ss_pred             ccccccceeccccccc---CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYT---IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ...||+.|||||++..   ..|+.++||||+|+++|++++|..||.+...................+...+..+.+++..
T Consensus       170 ~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~  249 (309)
T d1u5ra_         170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDS  249 (309)
T ss_dssp             CCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHH
T ss_pred             ccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHH
Confidence            4679999999999853   4588899999999999999999999987765544432222222222233334789999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ||..||.+|||+++++.+.++.
T Consensus       250 ~L~~dP~~Rpt~~ell~Hp~~~  271 (309)
T d1u5ra_         250 CLQKIPQDRPTSEVLLKHRFVL  271 (309)
T ss_dssp             HTCSSGGGSCCHHHHTTCHHHH
T ss_pred             HCcCChhHCcCHHHHHhCHHhc
Confidence            9999999999999996655553

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=7.8e-25  Score=128.29  Aligned_cols=93  Identities=18%  Similarity=0.160  Sum_probs=71.4

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ...||+.|||||.+....++.++||||+|+++|++++ |..||.+...............+...|...++++.+++..||
T Consensus       225 ~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl  304 (325)
T d1rjba_         225 NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCW  304 (325)
T ss_dssp             TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             cccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHc
Confidence            3567999999999998999999999999999999997 899998654332222111111222333344478999999999


Q ss_pred             CCCCCCCCCHhhHH
Q 041728           82 NGNPESRLIITLTD   95 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~   95 (108)
                      +.||++|||+++|+
T Consensus       305 ~~dP~~RPt~~ei~  318 (325)
T d1rjba_         305 AFDSRKRPSFPNLT  318 (325)
T ss_dssp             CSSGGGSCCHHHHH
T ss_pred             CCChhHCcCHHHHH
Confidence            99999999999994

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.7e-24  Score=122.95  Aligned_cols=98  Identities=16%  Similarity=0.174  Sum_probs=72.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhC-CCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKG-KHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..||+.|||||.+....++.++||||+|+++|+++++ .+++..............+. +...+...+..+.+++..||.
T Consensus       173 ~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~cl~  251 (283)
T d1mqba_         173 GKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF-RLPTPMDCPSAIYQLMMQCWQ  251 (283)
T ss_dssp             -CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC-CCCCCTTCBHHHHHHHHHHTC
T ss_pred             CCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccC-CCCCchhhHHHHHHHHHHHCc
Confidence            4588999999999989999999999999999999985 54555444333333322222 222233344789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      .+|++||++++| ..|+.+..
T Consensus       252 ~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         252 QERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             SSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCHhHCcCHHHHHHHHHHHhh
Confidence            999999999999 66766644

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=6.1e-24  Score=121.09  Aligned_cols=92  Identities=18%  Similarity=0.329  Sum_probs=74.9

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ...||+.|+|||.+....++.++||||+|+++|++++ |..||...........+... .....|...+.++.+++.+||
T Consensus       160 ~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl  238 (258)
T d1k2pa_         160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLYRPHLASEKVYTIMYSCW  238 (258)
T ss_dssp             CSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHTT
T ss_pred             ccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhC-CCCCCcccccHHHHHHHHHHc
Confidence            3568899999999998899999999999999999998 89999877655554443333 233445555588999999999


Q ss_pred             CCCCCCCCCHhhHH
Q 041728           82 NGNPESRLIITLTD   95 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~   95 (108)
                      +.||++||++++|+
T Consensus       239 ~~dP~~RPt~~eil  252 (258)
T d1k2pa_         239 HEKADERPTFKILL  252 (258)
T ss_dssp             CSSGGGSCCHHHHH
T ss_pred             cCCHhHCcCHHHHH
Confidence            99999999999983

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.1e-24  Score=126.03  Aligned_cols=98  Identities=17%  Similarity=0.139  Sum_probs=75.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc-CCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL-PIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ..+||+.|+|||.+.+..++.++||||+|+++|++++|..||.+.+........ .........+...+..+.+++.+||
T Consensus       175 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L  254 (293)
T d1yhwa1         175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL  254 (293)
T ss_dssp             CCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHT
T ss_pred             ccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHc
Confidence            467999999999999888999999999999999999999999876644433321 1111122222223377999999999


Q ss_pred             CCCCCCCCCHhhHHHHHHH
Q 041728           82 NGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ..||.+||+++|++.+.++
T Consensus       255 ~~dP~~R~s~~eil~Hp~~  273 (293)
T d1yhwa1         255 DMDVEKRGSAKELLQHQFL  273 (293)
T ss_dssp             CSSTTTSCCHHHHTTCGGG
T ss_pred             cCChhHCcCHHHHhcCHhh
Confidence            9999999999999666555

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.1e-24  Score=123.96  Aligned_cols=98  Identities=21%  Similarity=0.287  Sum_probs=72.8

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhC-CCCCCcchhHHhhh-hcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKG-KHPRDQMFFLQFQL-HLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ...||+.|||||.+.+..++.++||||+|+++|+++++ ..||.+........ ....+ .....+...+.++.+++..|
T Consensus       195 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~c  273 (299)
T d1ywna1         195 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMRAPDYTTPEMYQTMLDC  273 (299)
T ss_dssp             SCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHT-CCCCCCTTCCHHHHHHHHHH
T ss_pred             ceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC-CCCCCCccCCHHHHHHHHHH
Confidence            46799999999999989999999999999999999985 56776554322222 11111 11222333347899999999


Q ss_pred             cCCCCCCCCCHhhH-HHHHHHH
Q 041728           81 LNGNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      |..||.+||++++| ..|+.+.
T Consensus       274 l~~dP~~Rpt~~eil~~L~~il  295 (299)
T d1ywna1         274 WHGEPSQRPTFSELVEHLGNLL  295 (299)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCCChhHCcCHHHHHHHHHHHH
Confidence            99999999999999 6666654

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.4e-24  Score=124.73  Aligned_cols=97  Identities=18%  Similarity=0.194  Sum_probs=73.7

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..||+.|+|||.+.+..++.++||||+|+++|++++ |..||.+............+ .....+...+..+.+++..||.
T Consensus       173 ~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~-~~~~~p~~~~~~~~~li~~cl~  251 (317)
T d1xkka_         173 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-ERLPQPPICTIDVYMIMVKCWM  251 (317)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHT-CCCCCCTTBCHHHHHHHHHHTC
T ss_pred             cccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-CCCCCCcccCHHHHHHHHHhCC
Confidence            468999999999998999999999999999999998 88898876544333322222 1222233344789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      .||.+||++.+| ..+..+.
T Consensus       252 ~dP~~RPs~~eil~~l~~~~  271 (317)
T d1xkka_         252 IDADSRPKFRELIIEFSKMA  271 (317)
T ss_dssp             SSGGGSCCHHHHHHHHHHHH
T ss_pred             CChhhCcCHHHHHHHHHHHH
Confidence            999999999999 6666654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=2.9e-24  Score=125.04  Aligned_cols=97  Identities=12%  Similarity=0.017  Sum_probs=72.0

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcC---CCCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEM---LDPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~   79 (108)
                      +.+||+.|||||.+.+..|+.++||||+|+++|++++|..||.+.........+.......   ..+.++ .++.+++..
T Consensus       168 ~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~  246 (307)
T d1a06a_         168 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDIS-DSAKDFIRH  246 (307)
T ss_dssp             -----CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSC-HHHHHHHHH
T ss_pred             eeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCC-HHHHHHHHH
Confidence            4679999999999998889999999999999999999999998765544433222221121   223333 779999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ||..||.+|||++|++.+.++
T Consensus       247 ~L~~dP~~R~s~~eil~hp~~  267 (307)
T d1a06a_         247 LMEKDPEKRFTCEQALQHPWI  267 (307)
T ss_dssp             HSCSSGGGSCCHHHHHHSTTT
T ss_pred             HccCCHhHCcCHHHHhcCHhh
Confidence            999999999999999765554

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=6.1e-24  Score=123.37  Aligned_cols=97  Identities=15%  Similarity=0.138  Sum_probs=75.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhC-CCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKG-KHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ...|++.|+|||.+....++.++||||||+++|+++++ ..||.+.+..+................++ .++.+++..||
T Consensus       201 ~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~-~~~~~li~~cl  279 (301)
T d1lufa_         201 NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCP-LELYNLMRLCW  279 (301)
T ss_dssp             -CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCC-HHHHHHHHHHT
T ss_pred             CCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCccch-HHHHHHHHHHc
Confidence            45688999999999999999999999999999999986 56787776655554433332222233344 78999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l  100 (108)
                      +.+|.+||++.+| ..|+++
T Consensus       280 ~~~P~~RPt~~ev~~~L~~i  299 (301)
T d1lufa_         280 SKLPADRPSFCSIHRILQRM  299 (301)
T ss_dssp             CSSGGGSCCHHHHHHHHHHT
T ss_pred             CCChhHCcCHHHHHHHHHHh
Confidence            9999999999999 556554

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.4e-24  Score=123.79  Aligned_cols=97  Identities=11%  Similarity=0.044  Sum_probs=75.1

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      +.+||+.|||||++.+..++.++||||+|+++|++++|..||.+.+.......+....... ...+ +.++.+++.+||+
T Consensus       169 ~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~-p~~~-s~~~~~li~~~L~  246 (288)
T d1uu3a_         169 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF-PEKF-FPKARDLVEKLLV  246 (288)
T ss_dssp             -CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCC-CTTC-CHHHHHHHHTTSC
T ss_pred             cccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCC-CccC-CHHHHHHHHHHcc
Confidence            4679999999999998899999999999999999999999998776554443322221211 1223 3779999999999


Q ss_pred             CCCCCCCCHhhHHHHHHHH
Q 041728           83 GNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .||.+|||++|+.....+.
T Consensus       247 ~dP~~R~t~~e~~~~~~i~  265 (288)
T d1uu3a_         247 LDATKRLGCEEMEGYGPLK  265 (288)
T ss_dssp             SSGGGSTTSGGGTCHHHHH
T ss_pred             CCHhHCcCHHHHcCCHHHH
Confidence            9999999999985445444

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.4e-23  Score=120.41  Aligned_cols=97  Identities=22%  Similarity=0.257  Sum_probs=72.2

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhC-CCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKG-KHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ...||+.|||||.+....++.++||||+|+++|+++++ .+++............... .+...|...+.++.+++..||
T Consensus       169 ~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl  247 (272)
T d1qpca_         169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRMVRPDNCPEELYQLMRLCW  247 (272)
T ss_dssp             TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHT
T ss_pred             ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc-CCCCCcccChHHHHHHHHHHc
Confidence            45688999999999888899999999999999999995 5555554443333333222 222233334478999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l  100 (108)
                      ..||++|||+++| ..|+.+
T Consensus       248 ~~~P~~Rpt~~ei~~~L~~~  267 (272)
T d1qpca_         248 KERPEDRPTFDYLRSVLEDF  267 (272)
T ss_dssp             CSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCHhHCcCHHHHHHHhhhh
Confidence            9999999999999 545543

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.7e-24  Score=123.66  Aligned_cols=98  Identities=14%  Similarity=0.153  Sum_probs=73.5

Q ss_pred             ccccccceecccccc-----cCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC-CCcCCCCCCCchHHHHH
Q 041728            3 DILLEFMNFFEGLAY-----TIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP-LDEMLDPRLPPDPLFDV   76 (108)
Q Consensus         3 ~~~~~~~~~ape~~~-----~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l   76 (108)
                      +..||+.|+|||.+.     ...|+.++||||+|+++|++++|..||.+.+.......+... ......+...+.++.++
T Consensus       169 ~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~l  248 (288)
T d2jfla1         169 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDF  248 (288)
T ss_dssp             CCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHH
T ss_pred             ccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHH
Confidence            567999999999874     355788999999999999999999999876655443322211 12222222334779999


Q ss_pred             HhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           77 AFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        77 ~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      +.+||+.||.+|||++|++.+.++
T Consensus       249 i~~~L~~dp~~R~t~~ell~hp~~  272 (288)
T d2jfla1         249 LKKCLEKNVDARWTTSQLLQHPFV  272 (288)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTSGGG
T ss_pred             HHHHccCChhHCcCHHHHhcCccc
Confidence            999999999999999999655443

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.2e-23  Score=120.70  Aligned_cols=91  Identities=19%  Similarity=0.243  Sum_probs=71.6

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..||..|+|||.+....++.++||||||+++|++++ |..||.+.+.................+...+..+.+++..||.
T Consensus       174 ~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~  253 (273)
T d1u46a_         174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWA  253 (273)
T ss_dssp             --CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             cccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHHHHHHHHHHcC
Confidence            457889999999998889999999999999999997 8999987766555443322222333333334789999999999


Q ss_pred             CCCCCCCCHhhH
Q 041728           83 GNPESRLIITLT   94 (108)
Q Consensus        83 ~~p~~Rp~~~~l   94 (108)
                      .||++||++.+|
T Consensus       254 ~dp~~RPt~~ei  265 (273)
T d1u46a_         254 HKPEDRPTFVAL  265 (273)
T ss_dssp             SSGGGSCCHHHH
T ss_pred             CChhHCcCHHHH
Confidence            999999999999

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=3.2e-23  Score=119.08  Aligned_cols=98  Identities=20%  Similarity=0.196  Sum_probs=71.0

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc---CCCCCcCCCCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL---PIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ..+||+.|+|||.+.+..++.++||||+|+++|++++|..||.+..........   .........+.++ ..+.+++.+
T Consensus       173 ~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~l~~li~~  251 (277)
T d1o6ya_         173 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS-ADLDAVVLK  251 (277)
T ss_dssp             ------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCC-HHHHHHHHH
T ss_pred             cccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCC-HHHHHHHHH
Confidence            457999999999998888999999999999999999999999877655443311   1111122223344 779999999


Q ss_pred             hcCCCCCCCC-CHhhH-HHHHHHH
Q 041728           80 CLNGNPESRL-IITLT-DGLKRLA  101 (108)
Q Consensus        80 c~~~~p~~Rp-~~~~l-~~l~~l~  101 (108)
                      ||..||.+|| +++++ ..+.++.
T Consensus       252 ~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         252 ALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             HTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HccCCHhHCHhHHHHHHHHHHHHh
Confidence            9999999999 78888 6666654

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.9e-23  Score=120.43  Aligned_cols=97  Identities=22%  Similarity=0.259  Sum_probs=76.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..||+.|+|||.+....|+.++||||||+++|++++ |..||.+............+. ....+...+..+.+++..||+
T Consensus       197 ~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~-~~~~p~~~~~~l~~li~~cl~  275 (299)
T d1fgka_         197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-RMDKPSNCTNELYMMMRDCWH  275 (299)
T ss_dssp             SCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-CCCCCSSCCHHHHHHHHHHTC
T ss_pred             CCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCC-CCCCCccchHHHHHHHHHHcc
Confidence            568899999999998999999999999999999997 788887665544433332222 222233334789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      .||.+|||+++| ..|++|.
T Consensus       276 ~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         276 AVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             SSGGGSCCHHHHHHHHHHHH
T ss_pred             CCHhHCcCHHHHHHHHHHHh
Confidence            999999999999 7777764

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.8e-24  Score=123.98  Aligned_cols=99  Identities=15%  Similarity=0.071  Sum_probs=71.7

Q ss_pred             ccccccceecccccccCCC-cccccchhhhHHHHHHHhCCCCCCcchhHHh-hh-hcCCCCCcCCCCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKI-TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQF-QL-HLPIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~-~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ..+||+.|||||++....+ +.++||||+|+++|++++|+.||........ .. ...........+.++ .++.+++.+
T Consensus       164 ~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~li~~  242 (271)
T d1nvra_         164 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID-SAPLALLHK  242 (271)
T ss_dssp             CCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSC-HHHHHHHHH
T ss_pred             ceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCC-HHHHHHHHH
Confidence            4679999999999987776 5789999999999999999999975432211 11 111111111112233 778999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      ||..||.+||++++++.+.++..
T Consensus       243 ~L~~dP~~R~t~~eil~hpwf~~  265 (271)
T d1nvra_         243 ILVENPSARITIPDIKKDRWYNK  265 (271)
T ss_dssp             HSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             HcCCChhHCcCHHHHhcCHhhCc
Confidence            99999999999999966666543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.2e-23  Score=121.26  Aligned_cols=102  Identities=14%  Similarity=0.067  Sum_probs=72.8

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh---------------------------
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL---------------------------   54 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---------------------------   54 (108)
                      ++.+||+.|+|||++.+..|+.++||||+||++|++++|+.||.+.+......                           
T Consensus       161 ~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (322)
T d1s9ja_         161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSY  240 (322)
T ss_dssp             ---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-------------------------
T ss_pred             ccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccc
Confidence            45789999999999999899999999999999999999999997543111000                           


Q ss_pred             ---------------hcCCCCCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHHH
Q 041728           55 ---------------HLPIPLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLASF  103 (108)
Q Consensus        55 ---------------~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~~  103 (108)
                                     ...............+.++.+++.+||+.||.+|||++|++++.++...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~  304 (322)
T d1s9ja_         241 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  304 (322)
T ss_dssp             -----CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             ccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence                           0000000011111223568999999999999999999999888877653

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.9e-23  Score=120.99  Aligned_cols=99  Identities=26%  Similarity=0.346  Sum_probs=73.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCc-chhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQ-MFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..||+.|+|||.+....++.++||||||+++|+++++..|+.. ............+ .+...|...++++.+++..||.
T Consensus       194 ~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g-~~~~~p~~~~~~l~~li~~cl~  272 (311)
T d1r0pa_         194 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-RRLLQPEYCPDPLYEVMLKCWH  272 (311)
T ss_dssp             SSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTT-CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             ccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-CCCCCcccCcHHHHHHHHHHcC
Confidence            5688999999999888999999999999999999996666543 3322222222222 2233344445889999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRLASF  103 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l~~~  103 (108)
                      .||++||+++|| ..|+.+...
T Consensus       273 ~dP~~RPs~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         273 PKAEMRPSFSELVSRISAIFST  294 (311)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CCHhHCcCHHHHHHHHHHHHHh
Confidence            999999999999 777777553

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=5.8e-23  Score=119.60  Aligned_cols=99  Identities=21%  Similarity=0.209  Sum_probs=75.1

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhC-CCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKG-KHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ...||..|+|||.+....++.++||||||+++|++++| ..|+.+.+.......+.... +...+...++++.+++..||
T Consensus       185 ~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~li~~cl  263 (309)
T d1fvra_         185 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-RLEKPLNCDDEVYDLMRQCW  263 (309)
T ss_dssp             ---CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTC-CCCCCTTBCHHHHHHHHHHT
T ss_pred             ceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcC-CCCCCccCCHHHHHHHHHHc
Confidence            34689999999999989999999999999999999995 56787766555544433332 22223333478999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                      ..||++||++++| ..|+.+..
T Consensus       264 ~~dP~~RPs~~eil~~L~~i~~  285 (309)
T d1fvra_         264 REKPYERPSFAQILVSLNRMLE  285 (309)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCChhHCcCHHHHHHHHHHHHh
Confidence            9999999999999 66666653

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=4.2e-23  Score=119.42  Aligned_cols=97  Identities=13%  Similarity=0.028  Sum_probs=75.5

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcC---CCCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEM---LDPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~   79 (108)
                      ...||+.|+|||.+.+..++.++||||+|+++|++++|..||.+.........+.......   ..+.++ ..+.+++.+
T Consensus       175 ~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~  253 (293)
T d1jksa_         175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS-ALAKDFIRR  253 (293)
T ss_dssp             CCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC-HHHHHHHHT
T ss_pred             ccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCC-HHHHHHHHH
Confidence            4678999999999998889999999999999999999999998776554433222221111   112333 679999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ||..||.+||++++++.+.++
T Consensus       254 ~L~~dP~~R~s~~eil~hp~~  274 (293)
T d1jksa_         254 LLVKDPKKRMTIQDSLQHPWI  274 (293)
T ss_dssp             TSCSSGGGSCCHHHHHHSTTT
T ss_pred             HccCChhHCcCHHHHhcCccc
Confidence            999999999999999766555

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=6.1e-23  Score=118.48  Aligned_cols=96  Identities=19%  Similarity=0.196  Sum_probs=70.0

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCC-CCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHP-RDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..|++.|+|||.+....++.++||||+|+++|+++++..| +.+.............. ....+...+..+.+++..||+
T Consensus       176 ~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~cl~  254 (287)
T d1opja_         176 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY-RMERPEGCPEKVYELMRACWQ  254 (287)
T ss_dssp             EEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTC
T ss_pred             ccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCC-CCCCCccchHHHHHHHHHHcC
Confidence            3578899999999989999999999999999999996554 44443333222222221 222233344789999999999


Q ss_pred             CCCCCCCCHhhH-HHHHHH
Q 041728           83 GNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~~l  100 (108)
                      .||.+||++++| ..|+.+
T Consensus       255 ~dP~~Rps~~ei~~~L~~~  273 (287)
T d1opja_         255 WNPSDRPSFAEIHQAFETM  273 (287)
T ss_dssp             SSGGGSCCHHHHHHHHHHT
T ss_pred             CCHhHCcCHHHHHHHHHHH
Confidence            999999999999 445443

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=6.6e-23  Score=119.45  Aligned_cols=99  Identities=18%  Similarity=0.272  Sum_probs=73.4

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHh-CCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIK-GKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ...||+.|+|||.+....++.++||||||+++|++++ |.+++...+.............+...+...+..+.+++..||
T Consensus       206 ~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl  285 (311)
T d1t46a_         206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCW  285 (311)
T ss_dssp             SSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             ecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHc
Confidence            4678999999999988889999999999999999998 666666554332222111111223333334478999999999


Q ss_pred             CCCCCCCCCHhhH-HHHHHHH
Q 041728           82 NGNPESRLIITLT-DGLKRLA  101 (108)
Q Consensus        82 ~~~p~~Rp~~~~l-~~l~~l~  101 (108)
                      +.||.+||++++| ..|+++.
T Consensus       286 ~~dP~~RPs~~~il~~L~~~i  306 (311)
T d1t46a_         286 DADPLKRPTFKQIVQLIEKQI  306 (311)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCChhHCcCHHHHHHHHHHhh
Confidence            9999999999999 5666543

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.3e-22  Score=117.74  Aligned_cols=98  Identities=13%  Similarity=0.103  Sum_probs=72.5

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc------------CC-----------C
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL------------PI-----------P   59 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~------------~~-----------~   59 (108)
                      ...||+.|+|||++....|+.++||||+||++|++++|+.||.+.........+            ..           .
T Consensus       174 ~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (305)
T d1blxa_         174 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSK  253 (305)
T ss_dssp             CCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCC
T ss_pred             CcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccc
Confidence            467999999999999899999999999999999999999999865432211100            00           0


Q ss_pred             ---CCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           60 ---LDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        60 ---~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                         ........+ +..+.+|+.+||+.||.+|||++|++.+.++.
T Consensus       254 ~~~~~~~~~~~~-s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~  297 (305)
T d1blxa_         254 SAQPIEKFVTDI-DELGKDLLLKCLTFNPAKRISAYSALSHPYFQ  297 (305)
T ss_dssp             CCCCGGGTCCSC-CHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGT
T ss_pred             cccchhhccccC-CHHHHHHHHHHCcCChhHCcCHHHHhcChhhc
Confidence               000011112 25688999999999999999999997666654

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.86  E-value=7.7e-23  Score=120.79  Aligned_cols=97  Identities=15%  Similarity=-0.009  Sum_probs=74.7

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCC---CcCCCCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPL---DEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~   79 (108)
                      ...||+.|||||++.+..++.++||||+|+++|++++|..||.+.+.......+....   .....+.++ .++.+++.+
T Consensus       184 ~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~  262 (350)
T d1koaa2         184 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGIS-EDGKDFIRK  262 (350)
T ss_dssp             EECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCC-HHHHHHHHH
T ss_pred             eecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCC-HHHHHHHHH
Confidence            4679999999999998889999999999999999999999998765544333221111   111112233 679999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ||..||.+|||++|++.+.++
T Consensus       263 ~L~~dP~~R~t~~eil~hp~~  283 (350)
T d1koaa2         263 LLLADPNTRMTIHQALEHPWL  283 (350)
T ss_dssp             HCCSSGGGSCCHHHHHHSTTT
T ss_pred             HccCChhHCcCHHHHhcCccc
Confidence            999999999999999765554

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4.5e-22  Score=116.94  Aligned_cols=98  Identities=15%  Similarity=0.131  Sum_probs=72.9

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh----hcCCCCCcCCCC---CCCchHHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL----HLPIPLDEMLDP---RLPPDPLFD   75 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~   75 (108)
                      ..+||+.|||||.+.+..|+.++||||+|+++|++++|..||.+.+......    ...........+   .+ +.++.+
T Consensus       172 ~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-s~~~~~  250 (335)
T d2ozaa1         172 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV-SEEVKM  250 (335)
T ss_dssp             CCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHS-CHHHHH
T ss_pred             cccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccC-CHHHHH
Confidence            4679999999999988889999999999999999999999997654322211    111111111111   12 266999


Q ss_pred             HHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      |+.+||+.||++||++.+++.+.++.
T Consensus       251 li~~~L~~dP~~R~s~~eil~hp~~~  276 (335)
T d2ozaa1         251 LIRNLLKTEPTQRMTITEFMNHPWIM  276 (335)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHHSHHHH
T ss_pred             HHHHHccCChhHCcCHHHHHcCHHhh
Confidence            99999999999999999997766664

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=3.5e-22  Score=115.18  Aligned_cols=94  Identities=22%  Similarity=0.247  Sum_probs=69.3

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhC-CCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKG-KHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..||+.|+|||.+....++.++||||+|+++|++++| .+++.....................+.+ +.++.+++..||+
T Consensus       174 ~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~l~~li~~cl~  252 (285)
T d1fmka3         174 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC-PESLHDLMCQCWR  252 (285)
T ss_dssp             --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTS-CHHHHHHHHHHTC
T ss_pred             ccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCccc-CHHHHHHHHHHcc
Confidence            5689999999999989999999999999999999995 4455544443333333332222233333 4789999999999


Q ss_pred             CCCCCCCCHhhH-HHHH
Q 041728           83 GNPESRLIITLT-DGLK   98 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~   98 (108)
                      .||++||++++| ..|+
T Consensus       253 ~dP~~Rps~~~i~~~L~  269 (285)
T d1fmka3         253 KEPEERPTFEYLQAFLE  269 (285)
T ss_dssp             SSGGGSCCHHHHHHHHH
T ss_pred             cCHhHCcCHHHHHHHHh
Confidence            999999999999 4343

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.5e-22  Score=118.36  Aligned_cols=96  Identities=18%  Similarity=0.133  Sum_probs=74.5

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...||+.|+|||.+.+..++.++||||+||++|++++|..||.+.+.......+.....  ..|...+.++.+++.+||.
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~--~~p~~~s~~~~dli~~~L~  239 (320)
T d1xjda_         162 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP--FYPRWLEKEAKDLLVKLFV  239 (320)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHSC
T ss_pred             ccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--CCCccCCHHHHHHHHHhcc
Confidence            46799999999999999999999999999999999999999987765544433222211  2223334789999999999


Q ss_pred             CCCCCCCCHh-hHHHHHHH
Q 041728           83 GNPESRLIIT-LTDGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp~~~-~l~~l~~l  100 (108)
                      .||.+||++. ++..+.++
T Consensus       240 ~dP~~R~s~~~~l~~hpff  258 (320)
T d1xjda_         240 REPEKRLGVRGDIRQHPLF  258 (320)
T ss_dssp             SSGGGSBTTBSCGGGSGGG
T ss_pred             cCCCCCcCHHHHHHhCchh
Confidence            9999999985 67544443

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.85  E-value=3.9e-22  Score=117.82  Aligned_cols=97  Identities=15%  Similarity=0.018  Sum_probs=75.3

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC---CCcCCCCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP---LDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ...||+.|+|||.+.+..++.++||||+||++|++++|..||.+.........+...   ......+.++ .++.+|+..
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~  265 (352)
T d1koba_         187 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVS-PEAKDFIKN  265 (352)
T ss_dssp             EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSC-HHHHHHHHT
T ss_pred             eccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCC-HHHHHHHHH
Confidence            357999999999999888999999999999999999999999876655443322211   1122223334 779999999


Q ss_pred             hcCCCCCCCCCHhhHHHHHHH
Q 041728           80 CLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                      ||+.||.+||+++|++.+.++
T Consensus       266 ~L~~dp~~R~s~~eil~Hp~~  286 (352)
T d1koba_         266 LLQKEPRKRLTVHDALEHPWL  286 (352)
T ss_dssp             TSCSSGGGSCCHHHHHTSTTT
T ss_pred             HccCChhHCcCHHHHhcCHhh
Confidence            999999999999998655444

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=7.1e-22  Score=116.13  Aligned_cols=96  Identities=13%  Similarity=0.020  Sum_probs=73.9

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..+||+.|+|||.+.+..|+.++|+||+||++|++++|..||.+.+.............  ..|...+.++.+++.+||+
T Consensus       164 ~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~dli~~~L~  241 (337)
T d1o6la_         164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI--RFPRTLSPEAKSLLAGLLK  241 (337)
T ss_dssp             CCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTC
T ss_pred             cceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCC--CCCccCCHHHHHHHHhhcc
Confidence            47899999999999999999999999999999999999999987765444332222211  1223334779999999999


Q ss_pred             CCCCCCCC-----HhhHHHHHHH
Q 041728           83 GNPESRLI-----ITLTDGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp~-----~~~l~~l~~l  100 (108)
                      .||.+|++     +.++..+.++
T Consensus       242 ~dP~~R~~~~~~~~~eil~Hp~f  264 (337)
T d1o6la_         242 KDPKQRLGGGPSDAKEVMEHRFF  264 (337)
T ss_dssp             SSTTTSTTCSTTTHHHHHTSGGG
T ss_pred             CCchhhcccccccHHHHHcCccc
Confidence            99999995     6677554443

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=4.5e-22  Score=116.14  Aligned_cols=97  Identities=13%  Similarity=0.081  Sum_probs=75.0

Q ss_pred             cccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhc
Q 041728            2 TDILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCL   81 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   81 (108)
                      ++.+||+.|||||.+.+..|+.++||||+|+++|++++|..||.+.+.......+...... ..+.++ .++.+++.+||
T Consensus       159 ~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~-~p~~~s-~~~~~li~~~L  236 (316)
T d1fota_         159 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELR-FPPFFN-EDVKDLLSRLI  236 (316)
T ss_dssp             CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCC-CCTTSC-HHHHHHHHHHT
T ss_pred             ccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCC-CCCCCC-HHHHHHHHHHh
Confidence            3578999999999998888999999999999999999999999877655444432222111 122333 77999999999


Q ss_pred             CCCCCCCC-----CHhhHHHHHHH
Q 041728           82 NGNPESRL-----IITLTDGLKRL  100 (108)
Q Consensus        82 ~~~p~~Rp-----~~~~l~~l~~l  100 (108)
                      ..||.+|+     ++++++.+.++
T Consensus       237 ~~dp~~R~~~~r~t~~~il~Hp~f  260 (316)
T d1fota_         237 TRDLSQRLGNLQNGTEDVKNHPWF  260 (316)
T ss_dssp             CSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred             hhCHHhccccchhhHHHHHcCccc
Confidence            99999996     78888655554

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=4.5e-22  Score=114.11  Aligned_cols=92  Identities=14%  Similarity=0.093  Sum_probs=71.4

Q ss_pred             cccccccceecccccccCCC-cccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhh
Q 041728            2 TDILLEFMNFFEGLAYTIKI-TEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~~~~-~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   80 (108)
                      ++..||+.|+|||.+....+ +.++||||+|+++|++++|..||........   ..    ....+.++ .++.+++..|
T Consensus       167 ~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i~~---~~----~~~~~~~s-~~~~~li~~~  238 (273)
T d1xwsa_         167 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---GQ----VFFRQRVS-SECQHLIRWC  238 (273)
T ss_dssp             CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH---CC----CCCSSCCC-HHHHHHHHHH
T ss_pred             cccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHHhh---cc----cCCCCCCC-HHHHHHHHHH
Confidence            35789999999999887665 5678999999999999999999986542211   11    11122333 7899999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      |..||++|||++|++.+.++.
T Consensus       239 L~~dp~~R~s~~eil~hp~~~  259 (273)
T d1xwsa_         239 LALRPSDRPTFEEIQNHPWMQ  259 (273)
T ss_dssp             TCSSGGGSCCHHHHHTSGGGS
T ss_pred             ccCCHhHCcCHHHHhcCHhhC
Confidence            999999999999997666654

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=9.1e-22  Score=114.49  Aligned_cols=94  Identities=22%  Similarity=0.140  Sum_probs=73.2

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhC-CCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKG-KHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ..||+.|+|||.+....++.++|+||||+++|+++++ ..|+.+.+..+..............+.+ +..+.+++..||+
T Consensus       195 ~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p~~~-~~~l~~li~~cl~  273 (308)
T d1p4oa_         195 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC-PDMLFELMRMCWQ  273 (308)
T ss_dssp             SEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTC-CHHHHHHHHHHTC
T ss_pred             eecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCCCCcccc-hHHHHHHHHHHcC
Confidence            4689999999999989999999999999999999996 6788877665555533332222222333 3779999999999


Q ss_pred             CCCCCCCCHhhH-HHHH
Q 041728           83 GNPESRLIITLT-DGLK   98 (108)
Q Consensus        83 ~~p~~Rp~~~~l-~~l~   98 (108)
                      .+|.+||++++| ..|+
T Consensus       274 ~~P~~RPs~~~il~~L~  290 (308)
T d1p4oa_         274 YNPKMRPSFLEIISSIK  290 (308)
T ss_dssp             SSGGGSCCHHHHHHHHG
T ss_pred             CChhHCcCHHHHHHHHH
Confidence            999999999999 4333

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=5.9e-22  Score=116.99  Aligned_cols=96  Identities=14%  Similarity=0.073  Sum_probs=74.6

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcCCCCCCCchHHHHHHhhhcC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEMLDPRLPPDPLFDVAFSCLN   82 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~   82 (108)
                      ...||+.|||||++.+..++.++||||+||++|++++|..||.+.+.......+...... ....+ +.++.+++..||.
T Consensus       197 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~-~p~~~-s~~~~~li~~~L~  274 (350)
T d1rdqe_         197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHF-SSDLKDLLRNLLQ  274 (350)
T ss_dssp             CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CCTTC-CHHHHHHHHHHSC
T ss_pred             cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCC-CCccC-CHHHHHHHHHHhh
Confidence            467999999999999888999999999999999999999999877655444432222111 12233 3779999999999


Q ss_pred             CCCCCCC-----CHhhHHHHHHH
Q 041728           83 GNPESRL-----IITLTDGLKRL  100 (108)
Q Consensus        83 ~~p~~Rp-----~~~~l~~l~~l  100 (108)
                      .||.+|+     ++++++.+.++
T Consensus       275 ~dP~kR~~~~r~t~~ell~Hp~f  297 (350)
T d1rdqe_         275 VDLTKRFGNLKNGVNDIKNHKWF  297 (350)
T ss_dssp             SCTTTCTTSSTTTTHHHHTSGGG
T ss_pred             hCHHhccccccccHHHHHcCccc
Confidence            9999994     88888665554

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.83  E-value=1.2e-21  Score=113.52  Aligned_cols=97  Identities=11%  Similarity=0.012  Sum_probs=70.6

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh-------hcCCCCCcCCCCCCCchHHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL-------HLPIPLDEMLDPRLPPDPLFD   75 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~   75 (108)
                      ...||+.|||||.+.+..++.++||||+|+++|++++|..||..........       .......+...+.++ .++.+
T Consensus       172 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~  250 (299)
T d1ckia_         172 NLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYP-SEFAT  250 (299)
T ss_dssp             SCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSC-HHHHH
T ss_pred             CcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCC-HHHHH
Confidence            4579999999999998889999999999999999999999997543221111       000011111223334 77999


Q ss_pred             HHhhhcCCCCCCCCCHhhH-HHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l-~~l~~l  100 (108)
                      ++..||..+|++||+++++ ..|+.+
T Consensus       251 li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         251 YLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             HHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHccCChhHCcCHHHHHHHHHHH
Confidence            9999999999999999988 445544

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.83  E-value=1.1e-21  Score=116.42  Aligned_cols=97  Identities=11%  Similarity=0.084  Sum_probs=70.2

Q ss_pred             ccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHh--hhhcCCCCCcCCCCCCCchHHHHHHhh
Q 041728            3 DILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQF--QLHLPIPLDEMLDPRLPPDPLFDVAFS   79 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~   79 (108)
                      ..+||+.|+|||++.. ..|+.++||||+||++|++++|..||.+......  ...............+ +.++.+++.+
T Consensus       164 ~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~li~~  242 (364)
T d1omwa3         164 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF-SPELRSLLEG  242 (364)
T ss_dssp             SCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSS-CHHHHHHHHH
T ss_pred             ccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCCCC-CHHHHHHHHH
Confidence            4679999999999875 4688999999999999999999999975432111  1111111111122233 3779999999


Q ss_pred             hcCCCCCCCCC-----HhhHHHHHHH
Q 041728           80 CLNGNPESRLI-----ITLTDGLKRL  100 (108)
Q Consensus        80 c~~~~p~~Rp~-----~~~l~~l~~l  100 (108)
                      ||..||.+||+     +++++.+.++
T Consensus       243 ~L~~dP~~R~t~~~~~a~eil~Hp~f  268 (364)
T d1omwa3         243 LLQRDVNRRLGCLGRGAQEVKESPFF  268 (364)
T ss_dssp             HTCSSTTTSTTTSSSTHHHHHTSGGG
T ss_pred             HcccCHHHhCCCcccCHHHHHcCccc
Confidence            99999999999     5777655554

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=4.5e-21  Score=112.12  Aligned_cols=98  Identities=13%  Similarity=0.044  Sum_probs=76.1

Q ss_pred             cccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcC---CCCCCCchHHHHHHhhh
Q 041728            4 ILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEM---LDPRLPPDPLFDVAFSC   80 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~c   80 (108)
                      ..||+.|++||...+..++.++||||+|+++|++++|..||.+.........+.......   ..+.++ .++.+|+.+|
T Consensus       163 ~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~~  241 (321)
T d1tkia_         163 LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEIS-IEAMDFVDRL  241 (321)
T ss_dssp             EESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSC-HHHHHHHHTT
T ss_pred             cccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCC-HHHHHHHHHH
Confidence            568899999999988889999999999999999999999998776544433222211111   112333 6799999999


Q ss_pred             cCCCCCCCCCHhhHHHHHHHHH
Q 041728           81 LNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        81 ~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                      |..||.+||+++|++.+.++..
T Consensus       242 L~~dp~~R~s~~eil~hp~~~~  263 (321)
T d1tkia_         242 LVKERKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             SCSSGGGSCCHHHHHHSHHHHS
T ss_pred             ccCChhHCcCHHHHhcCHhhcc
Confidence            9999999999999977777653

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.8e-21  Score=111.39  Aligned_cols=98  Identities=13%  Similarity=0.045  Sum_probs=70.2

Q ss_pred             ccccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc--------CCCCC-----------c
Q 041728            3 DILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL--------PIPLD-----------E   62 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-----------~   62 (108)
                      ..+||+.|+|||.+... .++.++||||+||++|++++|..||.+.........+        .....           .
T Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~  238 (299)
T d1ua2a_         159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK  238 (299)
T ss_dssp             CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred             ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhc
Confidence            45799999999998754 5789999999999999999999999765433221100        00000           0


Q ss_pred             C--------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           63 M--------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        63 ~--------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .        ..+.. +..+.+|+.+||+.||++|||++|++.+.++.
T Consensus       239 ~~~~~~~~~~~~~~-s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~  284 (299)
T d1ua2a_         239 SFPGIPLHHIFSAA-GDDLLDLIQGLFLFNPCARITATQALKMKYFS  284 (299)
T ss_dssp             CCCCCCHHHHCTTC-CHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGT
T ss_pred             cCCCCChHHhcccC-CHHHHHHHHHHccCChhhCcCHHHHhCCHhhC
Confidence            0        00112 25689999999999999999999997666554

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=3e-20  Score=107.85  Aligned_cols=97  Identities=13%  Similarity=0.113  Sum_probs=65.3

Q ss_pred             ccccccceecccccccC------CCcccccchhhhHHHHHHHhCCCCCCcchhH--------------Hhhh-hcCCCCC
Q 041728            3 DILLEFMNFFEGLAYTI------KITEKYDVYSFGVLVLEVIKGKHPRDQMFFL--------------QFQL-HLPIPLD   61 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~------~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~--------------~~~~-~~~~~~~   61 (108)
                      ...||+.|+|||.+...      .++.++||||||+++|++++|..|+......              .... .....  
T Consensus       171 ~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  248 (303)
T d1vjya_         171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ--  248 (303)
T ss_dssp             -CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS--
T ss_pred             ceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhcc--
Confidence            35799999999988643      2567899999999999999987765321100              0000 01110  


Q ss_pred             cCCCCCCCc--------hHHHHHHhhhcCCCCCCCCCHhhH-HHHHHHHH
Q 041728           62 EMLDPRLPP--------DPLFDVAFSCLNGNPESRLIITLT-DGLKRLAS  102 (108)
Q Consensus        62 ~~~~~~~~~--------~~~~~l~~~c~~~~p~~Rp~~~~l-~~l~~l~~  102 (108)
                       ...|.++.        ..+.+++..||+.||.+||++.+| ..|..+..
T Consensus       249 -~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  297 (303)
T d1vjya_         249 -KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             -CCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -ccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence             11111111        348899999999999999999999 66776654

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.79  E-value=3.1e-20  Score=107.32  Aligned_cols=97  Identities=8%  Similarity=0.008  Sum_probs=71.2

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhH---Hhhh----hcCCCCCcCCCCCCCchHHHH
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFL---QFQL----HLPIPLDEMLDPRLPPDPLFD   75 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~   75 (108)
                      .+.||+.|||||.+.+..++.++|+||+|+++|++++|..||.+....   ....    .......+...+.++ .++.+
T Consensus       172 ~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p-~~l~~  250 (293)
T d1csna_         172 NLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFP-EEFYK  250 (293)
T ss_dssp             CCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSC-HHHHH
T ss_pred             ceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCC-HHHHH
Confidence            467999999999999888999999999999999999999999744211   1111    000111111223444 77999


Q ss_pred             HHhhhcCCCCCCCCCHhhH-HHHHHH
Q 041728           76 VAFSCLNGNPESRLIITLT-DGLKRL  100 (108)
Q Consensus        76 l~~~c~~~~p~~Rp~~~~l-~~l~~l  100 (108)
                      ++..||..+|++||+++.+ ..++.+
T Consensus       251 ii~~~~~~~~~~rP~y~~l~~~l~~~  276 (293)
T d1csna_         251 YMHYARNLAFDATPDYDYLQGLFSKV  276 (293)
T ss_dssp             HHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            9999999999999999888 444444

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.79  E-value=1.4e-20  Score=108.04  Aligned_cols=98  Identities=11%  Similarity=0.021  Sum_probs=72.9

Q ss_pred             ccccccceeccccccc------CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCCCCcC---CCCCCCchHH
Q 041728            3 DILLEFMNFFEGLAYT------IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIPLDEM---LDPRLPPDPL   73 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~------~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~   73 (108)
                      ...||+.|++||.+..      ..++.++||||+|+++|++++|..||.+.+.......+.......   ..+.++ +++
T Consensus       168 ~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~  246 (277)
T d1phka_         168 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYS-DTV  246 (277)
T ss_dssp             CCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSC-HHH
T ss_pred             eeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCC-HHH
Confidence            4678999999998752      346788999999999999999999998776544433222111111   112333 779


Q ss_pred             HHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           74 FDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        74 ~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .+++.+||..||.+||++++++.++++.
T Consensus       247 ~~li~~~L~~~p~~R~s~~eil~h~~~~  274 (277)
T d1phka_         247 KDLVSRFLVVQPQKRYTAEEALAHPFFQ  274 (277)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHHHHHHccCChhHCcCHHHHHcCHHHH
Confidence            9999999999999999999996665543

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=5.3e-20  Score=107.28  Aligned_cols=99  Identities=9%  Similarity=-0.054  Sum_probs=69.1

Q ss_pred             ccccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh----cCCCCCcC---C----------
Q 041728            3 DILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH----LPIPLDEM---L----------   64 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~----------   64 (108)
                      ..+||+.|+|||.+... .++.++||||+|+++|++++|+.||.+.........    ........   .          
T Consensus       180 ~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  259 (318)
T d3blha1         180 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLE  259 (318)
T ss_dssp             SCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------
T ss_pred             ceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhc
Confidence            35799999999998754 688999999999999999999999986543222110    00000000   0          


Q ss_pred             ---CCC----------CCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           65 ---DPR----------LPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        65 ---~~~----------~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                         ...          .....+.+|+.+||+.||++|+|++|++.+.++.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~  309 (318)
T d3blha1         260 LVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW  309 (318)
T ss_dssp             CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGS
T ss_pred             ccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhc
Confidence               000          0113467899999999999999999997766653

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=6.7e-19  Score=103.67  Aligned_cols=99  Identities=15%  Similarity=0.072  Sum_probs=70.9

Q ss_pred             cccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhh--------------------------
Q 041728            2 TDILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQL--------------------------   54 (108)
Q Consensus         2 ~~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~--------------------------   54 (108)
                      +...||+.|+|||.+.+ ..++.++||||+|++++++++|..||.+........                          
T Consensus       176 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (346)
T d1cm8a_         176 TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYM  255 (346)
T ss_dssp             CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHH
T ss_pred             ccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhh
Confidence            35679999999999876 456789999999999999999999997653221110                          


Q ss_pred             -hcCC---CCCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           55 -HLPI---PLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        55 -~~~~---~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                       ....   .......+... ..+.+|+..||..||.+|||++|++.+.++.
T Consensus       256 ~~~~~~~~~~~~~~~~~~s-~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~  305 (346)
T d1cm8a_         256 KGLPELEKKDFASILTNAS-PLAVNLLEKMLVLDAEQRVTAGEALAHPYFE  305 (346)
T ss_dssp             HHSCCCCCCCGGGTCTTCC-HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGT
T ss_pred             ccCCcccccchHHhccCCC-HHHHHHHHHHCcCChhHCcCHHHHhcChhhC
Confidence             0000   00111112223 6688999999999999999999997766654

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2.6e-19  Score=103.66  Aligned_cols=98  Identities=10%  Similarity=0.073  Sum_probs=69.3

Q ss_pred             ccccccceecccccccCC-CcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc-------CCC--------------C
Q 041728            3 DILLEFMNFFEGLAYTIK-ITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL-------PIP--------------L   60 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~-~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--------------~   60 (108)
                      ...||+.|+|||.+.... ++.++|+||+|+++|++++|..||.+.+........       ...              .
T Consensus       161 ~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  240 (298)
T d1gz8a_         161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF  240 (298)
T ss_dssp             CCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTS
T ss_pred             eecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccccccc
Confidence            457999999999877655 468899999999999999999999765432211100       000              0


Q ss_pred             CcCC-------CCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           61 DEML-------DPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        61 ~~~~-------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ....       .+... ..+.+++.+||..||.+|||++|+++++++.
T Consensus       241 ~~~~~~~~~~~~~~~s-~~~~dll~~mL~~dP~~R~t~~ell~H~ff~  287 (298)
T d1gz8a_         241 PKWARQDFSKVVPPLD-EDGRSLLSQMLHYDPNKRISAKAALAHPFFQ  287 (298)
T ss_dssp             CCCCCCCHHHHSTTCC-HHHHHHHHHHTCSSTTTSCCHHHHHTSGGGT
T ss_pred             ccccccchhhhccCCC-HHHHHHHHHHccCChhHCcCHHHHhCCHhhc
Confidence            0000       01112 5688999999999999999999997666653

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.75  E-value=7e-19  Score=101.23  Aligned_cols=96  Identities=15%  Similarity=0.122  Sum_probs=66.4

Q ss_pred             cccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh------------------cCCCCC---
Q 041728            4 ILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH------------------LPIPLD---   61 (108)
Q Consensus         4 ~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~---   61 (108)
                      ..|++.|++||.+.. ..++.++|+||+|++++++++|+.||.+.+..+....                  ......   
T Consensus       160 ~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T d1ob3a_         160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT  239 (286)
T ss_dssp             --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCC
T ss_pred             ecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccc
Confidence            468899999999875 4567999999999999999999999976542221110                  000000   


Q ss_pred             -------cCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHH
Q 041728           62 -------EMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRL  100 (108)
Q Consensus        62 -------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l  100 (108)
                             ....+.. +..+.+++..||+.||++|||++|++++.++
T Consensus       240 ~~~~~~~~~~~~~~-s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f  284 (286)
T d1ob3a_         240 VYEPLPWESFLKGL-DESGIDLLSKMLKLDPNQRITAKQALEHAYF  284 (286)
T ss_dssp             CCCCCCGGGTCCSC-CHHHHHHHHHHTCSSTTTSCCHHHHHTSGGG
T ss_pred             cccCcchhhhcccC-CHHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence                   0001111 2568899999999999999999999655544

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.4e-18  Score=102.50  Aligned_cols=99  Identities=15%  Similarity=0.143  Sum_probs=71.0

Q ss_pred             ccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc--------------------CCC--
Q 041728            3 DILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL--------------------PIP--   59 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~--   59 (108)
                      +..|++.|+|||.+.. ..++.++||||+||++|++++|..||............                    ...  
T Consensus       181 ~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~  260 (350)
T d1q5ka_         181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFP  260 (350)
T ss_dssp             SCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCC
T ss_pred             cccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhcccc
Confidence            4678999999998765 56889999999999999999999999755422211100                    000  


Q ss_pred             ------CCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHHH
Q 041728           60 ------LDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLAS  102 (108)
Q Consensus        60 ------~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~~  102 (108)
                            ......+..+ ..+.+|+.+||..||.+|||+.|++++.++..
T Consensus       261 ~~~~~~~~~~~~~~~s-~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  308 (350)
T d1q5ka_         261 QIKAHPWTKVFRPRTP-PEAIALCSRLLEYTPTARLTPLEACAHSFFDE  308 (350)
T ss_dssp             CCCCCCGGGTSCTTSC-HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             ccccCchhhhcccCCC-HHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence                  0011112223 67999999999999999999999976665543

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=4.9e-19  Score=103.46  Aligned_cols=98  Identities=17%  Similarity=0.057  Sum_probs=67.5

Q ss_pred             ccccccceecccccccC--CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhcCCC--CCcCCCCCCCchHHHHHHh
Q 041728            3 DILLEFMNFFEGLAYTI--KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHLPIP--LDEMLDPRLPPDPLFDVAF   78 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~--~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~   78 (108)
                      ...|++.|++||.+...  .++.++||||+||++|++++|..||.+.............  ......+...+.++.+++.
T Consensus       189 ~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  268 (322)
T d1vzoa_         189 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQ  268 (322)
T ss_dssp             GGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred             ccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCCHHHHHHHH
Confidence            45789999999998754  4567899999999999999999999765422211110000  0111122233478999999


Q ss_pred             hhcCCCCCCCCC-----HhhHHHHHHH
Q 041728           79 SCLNGNPESRLI-----ITLTDGLKRL  100 (108)
Q Consensus        79 ~c~~~~p~~Rp~-----~~~l~~l~~l  100 (108)
                      +||..||.+|++     ++|++.+.++
T Consensus       269 ~~l~~dP~~R~s~~~~t~~eil~Hpff  295 (322)
T d1vzoa_         269 RLLMKDPKKRLGCGPRDADEIKEHLFF  295 (322)
T ss_dssp             HHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred             HHcccCHHHcCCCCcccHHHHHcCHhh
Confidence            999999999995     6777655554

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=3.4e-18  Score=100.67  Aligned_cols=98  Identities=17%  Similarity=0.159  Sum_probs=68.6

Q ss_pred             ccccccceeccccccc-CCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh--------------------------
Q 041728            3 DILLEFMNFFEGLAYT-IKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH--------------------------   55 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~--------------------------   55 (108)
                      ..+||+.|+|||.+.. ..++.++|+||+|++++++++|..||.+.........                          
T Consensus       171 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (345)
T d1pmea_         171 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL  250 (345)
T ss_dssp             CCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHH
T ss_pred             cccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccc
Confidence            3568999999998854 5567899999999999999999999975432111100                          


Q ss_pred             -cCCCC---CcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           56 -LPIPL---DEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        56 -~~~~~---~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                       .....   .....+.+. ..+.+|+.+||..||.+||++++++.+.++.
T Consensus       251 ~~~~~~~~~~~~~~~~~s-~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~  299 (345)
T d1pmea_         251 SLPHKNKVPWNRLFPNAD-SKALDLLDKMLTFNPHKRIEVEQALAHPYLE  299 (345)
T ss_dssp             TSCCCCCCCHHHHCTTSC-HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGT
T ss_pred             cCCccCCCCHHHhCCCCC-HHHHHHHHHHccCChhHCcCHHHHhcCHhhc
Confidence             00000   000112222 5689999999999999999999997655543

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=9.7e-19  Score=103.33  Aligned_cols=99  Identities=13%  Similarity=0.060  Sum_probs=67.6

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhh----cCC------------------CC
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLH----LPI------------------PL   60 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~------------------~~   60 (108)
                      ..+||+.|+|||++.+..++.++||||+||+++++++|..||.+.+.......    ...                  ..
T Consensus       177 ~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (355)
T d2b1pa1         177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR  256 (355)
T ss_dssp             ----CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTS
T ss_pred             cccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcC
Confidence            45789999999999888899999999999999999999999965432211100    000                  00


Q ss_pred             Cc------------CCCCCC------CchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           61 DE------------MLDPRL------PPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        61 ~~------------~~~~~~------~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      ..            ...+..      .+..+.+|+.+|+..||++|||++|++.+.++.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~  315 (355)
T d2b1pa1         257 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN  315 (355)
T ss_dssp             CCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTG
T ss_pred             ccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccC
Confidence            00            000000      013478999999999999999999997776664

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.68  E-value=9.3e-18  Score=99.09  Aligned_cols=99  Identities=12%  Similarity=-0.008  Sum_probs=67.5

Q ss_pred             ccccccceecccccccCCCcccccchhhhHHHHHHHhCCCCCCcchhHH----------hhhh-----------------
Q 041728            3 DILLEFMNFFEGLAYTIKITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ----------FQLH-----------------   55 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~----------~~~~-----------------   55 (108)
                      ..+||+.|+|||.+....++.++|+||+|++++++++|+.||.......          ....                 
T Consensus       188 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~  267 (362)
T d1q8ya_         188 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRT  267 (362)
T ss_dssp             SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHH
T ss_pred             cccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhccccccc
Confidence            4679999999999998889999999999999999999999986432100          0000                 


Q ss_pred             -cC-CCC-CcCCC-------------CCCC---chHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           56 -LP-IPL-DEMLD-------------PRLP---PDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        56 -~~-~~~-~~~~~-------------~~~~---~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                       .. ... .....             ....   ...+.+|+.+|+..||.+|||++|++++.++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~  332 (362)
T d1q8ya_         268 FFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK  332 (362)
T ss_dssp             HBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGT
T ss_pred             ccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccC
Confidence             00 000 00000             0011   14588999999999999999999997776665

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=3.5e-18  Score=100.56  Aligned_cols=98  Identities=11%  Similarity=0.064  Sum_probs=69.0

Q ss_pred             ccccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHHhhhhc----CC-------------------
Q 041728            3 DILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQFQLHL----PI-------------------   58 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------------------   58 (108)
                      ...|++.|+|||..... .++.++|+||+|+++|++++|..||.+.+........    ..                   
T Consensus       177 ~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  256 (348)
T d2gfsa1         177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ  256 (348)
T ss_dssp             SSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHT
T ss_pred             cccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhh
Confidence            46689999999987664 4578999999999999999999999754322111100    00                   


Q ss_pred             CCCcC-------CCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           59 PLDEM-------LDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        59 ~~~~~-------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                      .....       ..... +..+.+|+.+|+..||.+|||++|++.+.++.
T Consensus       257 ~~~~~~~~~~~~~~~~~-s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~  305 (348)
T d2gfsa1         257 SLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRITAAQALAHAYFA  305 (348)
T ss_dssp             TSCCCCCCCHHHHSTTC-CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             hcccCCCcchhhhcCCC-CHHHHHHHHHHCcCChhhCcCHHHHhcCHhhC
Confidence            00000       01122 26689999999999999999999997666654

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.64  E-value=2.8e-17  Score=96.06  Aligned_cols=99  Identities=13%  Similarity=0.010  Sum_probs=67.5

Q ss_pred             ccccccceecccccccC-CCcccccchhhhHHHHHHHhCCCCCCcchhHH-----------------hhhh--cC-----
Q 041728            3 DILLEFMNFFEGLAYTI-KITEKYDVYSFGVLVLEVIKGKHPRDQMFFLQ-----------------FQLH--LP-----   57 (108)
Q Consensus         3 ~~~~~~~~~ape~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~-----------------~~~~--~~-----   57 (108)
                      ...||+.|+|||.+... .++.++|+||+|++++++++|..||.......                 ....  ..     
T Consensus       188 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~  267 (328)
T d3bqca1         188 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF  267 (328)
T ss_dssp             SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGG
T ss_pred             ccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCccc
Confidence            45689999999998764 47899999999999999999999986432100                 0000  00     


Q ss_pred             -----CC----CCcCC---CCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           58 -----IP----LDEML---DPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        58 -----~~----~~~~~---~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                           ..    .....   .....+.++.+|+.+||..||.+|||++|++++.++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~  323 (328)
T d3bqca1         268 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY  323 (328)
T ss_dssp             GGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             chhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence                 00    00000   0011125689999999999999999999997666543

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=9.1e-17  Score=92.43  Aligned_cols=97  Identities=14%  Similarity=0.084  Sum_probs=64.8

Q ss_pred             cccccceecccccccCC-CcccccchhhhHHHHHHHhCCCCCCcch-hHH---hhhh---cC-------------C----
Q 041728            4 ILLEFMNFFEGLAYTIK-ITEKYDVYSFGVLVLEVIKGKHPRDQMF-FLQ---FQLH---LP-------------I----   58 (108)
Q Consensus         4 ~~~~~~~~ape~~~~~~-~~~~~di~s~g~~~~~~~~~~~~~~~~~-~~~---~~~~---~~-------------~----   58 (108)
                      ..+++.|++||.+.... ++.++||||+|++++++++|..|+.... ...   ....   ..             .    
T Consensus       161 ~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (292)
T d1unla_         161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP  240 (292)
T ss_dssp             CCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCC
T ss_pred             eccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccc
Confidence            45778899999887654 6789999999999999999988864221 111   0000   00             0    


Q ss_pred             -----CCCcCCCCCCCchHHHHHHhhhcCCCCCCCCCHhhHHHHHHHH
Q 041728           59 -----PLDEMLDPRLPPDPLFDVAFSCLNGNPESRLIITLTDGLKRLA  101 (108)
Q Consensus        59 -----~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~l~~l~~l~  101 (108)
                           .......+.. ...+.+|+.+||+.||.+|||++|++.+.++.
T Consensus       241 ~~~~~~~~~~~~~~~-s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~  287 (292)
T d1unla_         241 MYPATTSLVNVVPKL-NATGRDLLQNLLKCNPVQRISAEEALQHPYFS  287 (292)
T ss_dssp             CCCTTCCCTTTSTTC-CHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGS
T ss_pred             cccccchhhhccccC-CHHHHHHHHHHccCChhHCcCHHHHhcChhhc
Confidence                 0000001111 25688999999999999999999997665553