BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041737
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5TGZ0|MOS1_HUMAN Mitochondrial inner membrane organizing system protein 1 OS=Homo
sapiens GN=MINOS1 PE=1 SV=1
Length = 78
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 72 DLNAKWDACI-DLTVRRFVYSSLGGAFAGLLFFRSPVTRWASVAFGAGLGIGSAYTDCSH 130
+L KWD C+ D V+ LG F+ L FF+ R +AFG+G+G+G AY++C H
Sbjct: 5 ELGRKWDRCLADAVVKIGTGFGLGIVFS-LTFFKR---RMWPLAFGSGMGLGMAYSNCQH 60
Query: 131 FFD 133
F
Sbjct: 61 DFQ 63
>sp|Q7TNS2|MOS1_MOUSE Mitochondrial inner membrane organizing system protein 1 OS=Mus
musculus GN=Minos1 PE=2 SV=1
Length = 76
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 72 DLNAKWDACI-DLTVRRFVYSSLGGAFAGLLFFRSPVTRWASVAFGAGLGIGSAYTDCSH 130
+L KWD C+ D V+ LG F+ L FF+ R +AFG+G+G+G AY++C H
Sbjct: 5 ELGRKWDRCMADTVVKLGTGFGLGIVFS-LTFFKR---RMWPLAFGSGVGLGMAYSNCQH 60
Query: 131 FFD 133
F
Sbjct: 61 DFQ 63
>sp|B2RYW8|MOS1_RAT Mitochondrial inner membrane organizing system protein 1 OS=Rattus
norvegicus GN=Minos1 PE=3 SV=1
Length = 76
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 76 KWDACI-DLTVRRFVYSSLGGAFAGLLFFRSPVTRWASVAFGAGLGIGSAYTDCSHFFD 133
KWD C+ D V+ LG F+ L FF+ +W +AFG+G+G+G AY++C H F
Sbjct: 9 KWDRCMADALVKLGTGFGLGMVFS-LTFFKR--RKW-PLAFGSGVGLGMAYSNCQHDFQ 63
>sp|Q7RYI0|MOS1_NEUCR Mitochondrial inner membrane organizing system protein NCU06495
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU06495 PE=3 SV=1
Length = 93
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 73 LNAKWDACI-DLTVRRFVYSSLGGAFAGLLFFRSPVTRWASVAFGAGLGIGSAYTDC 128
LN KWD C+ +L ++ + G F+ L+F R W + G G G G AY +C
Sbjct: 26 LNEKWDRCLSNLLIKSTLGLGFGVVFSVLIFKRRA---WPAFV-GVGFGAGRAYEEC 78
>sp|Q8T5T1|MDN1_GIAIN Midasin OS=Giardia intestinalis GN=MDN1 PE=3 SV=1
Length = 4835
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 53/130 (40%), Gaps = 24/130 (18%)
Query: 38 KENLHSRTEKEIEGICEINRMVEDNSKQIVPPKYDLNA---KWDACIDLTVRRFVYSSLG 94
K+ + R K + + ++ V+D+S KY L A ++AC L V + S G
Sbjct: 4613 KDKIWLRRTKPSKRVYQVLLAVDDSSSMAPIAKYALQAITLLFNACKFLEVGQLSVFSFG 4672
Query: 95 GAFAGLLFFRSPVTRW---ASVAFGAG--------------LGIGSAYTDCSHFFDGSPS 137
F LL P+T AS+A+ G + I S Y D FF GS S
Sbjct: 4673 QKFELLL----PITDQYNDASLAYAIGSFTFAQNETRVSDAISIASDYLDSVRFFKGSDS 4728
Query: 138 KLASPKISSD 147
L + SD
Sbjct: 4729 ALQLLLMISD 4738
>sp|Q9N4K0|MOS1_CAEEL Mitochondrial inner membrane organizing system protein F54A3.5
OS=Caenorhabditis elegans GN=F54A3.5 PE=3 SV=2
Length = 105
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 72 DLNAKWDACIDLTVRRFVYSSLGGAFAGLLFFRSPVTRWASVAFGAGLGIGSAYTDCSHF 131
++ K D C ++ + G A + FF+S R + FG+G+G+G+ +++C H
Sbjct: 16 EVGQKIDRCFADSLLKVTGGVAIGIVASVAFFKS---RSWPIWFGSGVGLGTGWSNCRHD 72
Query: 132 FDGSPSKLASPKISSDTPAPQ 152
F SP L ++ PA Q
Sbjct: 73 F-ASPYVLHGKRV----PAGQ 88
>sp|Q751T2|MOS1_ASHGO Mitochondrial inner membrane organizing system protein AFR743W
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=AFR743W PE=3 SV=1
Length = 82
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 68 PPKYDLNAKWDACIDLTVRRFVYSSLG---GAFAGLLFFRSPVTRWASVAFGAGLGIGSA 124
P + LN KWD + V V + LG G FA +LFF+ R V G G G+G
Sbjct: 10 PSRSILNDKWDVVLSNLV---VKTGLGFGAGVFASVLFFKR---RAFPVWLGVGFGLGRG 63
Query: 125 YTDCSHFF 132
Y + F
Sbjct: 64 YAEGDAIF 71
>sp|Q5UNW6|YL702_MIMIV Uncharacterized protein L702 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L702 PE=4 SV=1
Length = 764
Score = 31.6 bits (70), Expect = 2.0, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 55 INRMVEDNSKQIVPPKYDLNAKWDACIDLTVRRFVYSSLGGAF------AGLLFFRSPVT 108
+ +++++NS Q + AK C+DL V +F Y+ + F AG +FF ++
Sbjct: 438 LQKLIDNNSFQT---DTEYRAKLHRCLDLLVYKFFYNIVKNGFFHNDLHAGNIFFSHQLS 494
Query: 109 RWASVAFG--AGLGIGSAYTD 127
+ + FG + + I S+ TD
Sbjct: 495 QLTLIDFGSVSEINIFSSNTD 515
>sp|Q9HFF0|MOS1_SCHPO Mitochondrial inner membrane organizing system protein PJ691.03
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAPJ691.03 PE=3 SV=1
Length = 86
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 73 LNAKWDACIDLTVRRFVYSSLG---GAFAGLLFFRSPVTRWASVAFGAGLGIGSAYTD 127
LN +WD C+ V V S +G G + +LFFR W V G G G+G +Y D
Sbjct: 11 LNYQWDVCLSNMV---VQSGIGLGAGIVSSVLFFRRAA--WP-VWGGLGFGLGKSYAD 62
>sp|P0CM97|CWC22_CRYNB Pre-mRNA-splicing factor CWC22 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=CWC22 PE=3
SV=1
Length = 831
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 23/56 (41%)
Query: 81 IDLTVRRFVYSSLGGAFAGLLFFRSPVTRWASVAFGAGLGIGSAYTDCSHFFDGSP 136
I+ RF L AFAG+ +P S+ + +G+G D + +P
Sbjct: 602 INRVAERFRIPDLKPAFAGMFPMDNPKNARFSINYFTSIGMGKVTEDMREYLQNAP 657
>sp|P0CM96|CWC22_CRYNJ Pre-mRNA-splicing factor CWC22 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CWC22 PE=3 SV=1
Length = 831
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 23/56 (41%)
Query: 81 IDLTVRRFVYSSLGGAFAGLLFFRSPVTRWASVAFGAGLGIGSAYTDCSHFFDGSP 136
I+ RF L AFAG+ +P S+ + +G+G D + +P
Sbjct: 602 INRVAERFRIPDLKPAFAGMFPMDNPKNARFSINYFTSIGMGKVTEDMREYLQNAP 657
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,599,722
Number of Sequences: 539616
Number of extensions: 2533022
Number of successful extensions: 6312
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 6302
Number of HSP's gapped (non-prelim): 19
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)