Query 041737
Match_columns 152
No_of_seqs 105 out of 172
Neff 3.0
Searched_HMMs 13730
Date Mon Mar 25 17:20:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041737.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/041737hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1woqa2 c.55.1.10 (A:140-263) 14.4 20 0.0015 23.5 0.4 13 112-124 7-19 (124)
2 d1pl3a_ b.1.9.1 (A:) Cytochrom 9.6 32 0.0024 24.5 0.2 12 114-125 56-67 (186)
3 d1b8da_ a.1.1.3 (A:) Phycoeryt 8.9 68 0.005 22.7 1.8 23 74-96 76-101 (164)
4 d1jm6a2 d.122.1.4 (A:1177-1366 8.6 49 0.0036 22.8 0.8 11 118-128 141-151 (190)
5 d1hnja2 c.95.1.2 (A:175-317) K 7.8 36 0.0026 22.8 -0.2 15 114-128 125-139 (143)
6 d1u6ea2 c.95.1.2 (A:175-317) K 7.3 40 0.0029 22.8 -0.2 13 115-127 131-143 (148)
7 d1unld_ a.74.1.1 (D:) CDK5 act 7.1 77 0.0056 23.0 1.3 21 63-83 100-120 (150)
8 d1i58a_ d.122.1.3 (A:) Histidi 6.8 58 0.0042 20.4 0.5 13 115-127 148-160 (189)
9 d1mzja2 c.95.1.2 (A:184-336) P 6.4 55 0.004 22.2 0.2 14 115-128 131-144 (153)
10 d1ub7a2 c.95.1.2 (A:174-322) K 6.0 51 0.0037 22.1 -0.2 17 113-129 127-143 (149)
No 1
>d1woqa2 c.55.1.10 (A:140-263) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]}
Probab=14.44 E-value=20 Score=23.49 Aligned_cols=13 Identities=23% Similarity=0.590 Sum_probs=9.9
Q ss_pred eeeeccccccchh
Q 041737 112 SVAFGAGLGIGSA 124 (152)
Q Consensus 112 PIafGtGFGlG~A 124 (152)
-+.+|+|+|.|+-
T Consensus 7 ~ltlGTGiG~gii 19 (124)
T d1woqa2 7 VITLGTGIGSAFI 19 (124)
T ss_dssp EEEESSSEEEEEE
T ss_pred EEEEcCCeeEEEE
Confidence 5678888888764
No 2
>d1pl3a_ b.1.9.1 (A:) Cytochrome domain of cellobiose dehydrogenase {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}
Probab=9.59 E-value=32 Score=24.48 Aligned_cols=12 Identities=25% Similarity=0.235 Sum_probs=8.7
Q ss_pred eeccccccchhh
Q 041737 114 AFGAGLGIGSAY 125 (152)
Q Consensus 114 afGtGFGlG~AY 125 (152)
|+|+|||-+|+-
T Consensus 56 WvgiG~gg~M~g 67 (186)
T d1pl3a_ 56 WIGIALGGAHNN 67 (186)
T ss_dssp EEEEETTSSSSS
T ss_pred EEEEEcCCCCCC
Confidence 378888877753
No 3
>d1b8da_ a.1.1.3 (A:) Phycoerythrin alpha subunit {Red alga (Griffithsia monilis) [TaxId: 42003]}
Probab=8.89 E-value=68 Score=22.65 Aligned_cols=23 Identities=26% Similarity=0.339 Sum_probs=18.8
Q ss_pred HHHHHHHHHH---HHHHhhhcccccc
Q 041737 74 NAKWDACIDL---TVRRFVYSSLGGA 96 (152)
Q Consensus 74 ~eKWDrCLsd---tl~K~g~G~l~Gv 96 (152)
.++++.|+-| .|+.+.|++++|-
T Consensus 76 ~~r~~~C~RD~~~~LR~itYai~aGd 101 (164)
T d1b8da_ 76 PEKINKCYRDIDHYMRLINYSLVVGG 101 (164)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4789999964 6888899998875
No 4
>d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]}
Probab=8.61 E-value=49 Score=22.82 Aligned_cols=11 Identities=27% Similarity=0.555 Sum_probs=7.1
Q ss_pred ccccchhhhhh
Q 041737 118 GLGIGSAYTDC 128 (152)
Q Consensus 118 GFGlG~AYsnC 128 (152)
|.|+|++.+.+
T Consensus 141 G~GLGL~i~k~ 151 (190)
T d1jm6a2 141 GFGYGLPISRL 151 (190)
T ss_dssp CSSCHHHHHHH
T ss_pred CCCccHHHHHH
Confidence 67777766543
No 5
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}
Probab=7.81 E-value=36 Score=22.78 Aligned_cols=15 Identities=13% Similarity=0.239 Sum_probs=9.9
Q ss_pred eeccccccchhhhhh
Q 041737 114 AFGAGLGIGSAYTDC 128 (152)
Q Consensus 114 afGtGFGlG~AYsnC 128 (152)
.+-+|||.|++|.-+
T Consensus 125 vll~g~G~G~s~g~~ 139 (143)
T d1hnja2 125 VLLEAFGGGFTWGSA 139 (143)
T ss_dssp EEEEEEETTTEEEEE
T ss_pred EEEEEEehhhhhEEE
Confidence 355778888877543
No 6
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=7.30 E-value=40 Score=22.83 Aligned_cols=13 Identities=31% Similarity=0.588 Sum_probs=8.4
Q ss_pred eccccccchhhhh
Q 041737 115 FGAGLGIGSAYTD 127 (152)
Q Consensus 115 fGtGFGlG~AYsn 127 (152)
+-+|||.|++|.-
T Consensus 131 ll~gfG~G~s~~a 143 (148)
T d1u6ea2 131 LLIGYGAGLSYAA 143 (148)
T ss_dssp EEEEEETTTEEEE
T ss_pred EEEEEchhhhheE
Confidence 4557777777653
No 7
>d1unld_ a.74.1.1 (D:) CDK5 activator 1 (NCK5a, p25) {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.06 E-value=77 Score=22.99 Aligned_cols=21 Identities=19% Similarity=0.352 Sum_probs=15.5
Q ss_pred CCCCCCChhHHHHHHHHHHHH
Q 041737 63 SKQIVPPKYDLNAKWDACIDL 83 (152)
Q Consensus 63 ~~~~ipSE~~L~eKWDrCLsd 83 (152)
+.+|---|+.-+.=|||||+-
T Consensus 100 PLKPFLve~~k~~FWdRCl~I 120 (150)
T d1unld_ 100 PLKPFLVESCKEAFWDRCLSV 120 (150)
T ss_dssp CSGGGCCSSCHHHHHHHHHHH
T ss_pred CCcceeecccHHHHHHHHHHH
Confidence 334444588889999999973
No 8
>d1i58a_ d.122.1.3 (A:) Histidine kinase CheA {Thermotoga maritima [TaxId: 2336]}
Probab=6.85 E-value=58 Score=20.43 Aligned_cols=13 Identities=23% Similarity=0.317 Sum_probs=8.5
Q ss_pred eccccccchhhhh
Q 041737 115 FGAGLGIGSAYTD 127 (152)
Q Consensus 115 fGtGFGlG~AYsn 127 (152)
-+-|.|+|+|.+.
T Consensus 148 ~~~G~GLGLai~k 160 (189)
T d1i58a_ 148 EVSGRGVGMDVVK 160 (189)
T ss_dssp GGGTCCCHHHHHH
T ss_pred cCCcCccCHHHHH
Confidence 3567777777654
No 9
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}
Probab=6.43 E-value=55 Score=22.15 Aligned_cols=14 Identities=29% Similarity=0.567 Sum_probs=9.6
Q ss_pred eccccccchhhhhh
Q 041737 115 FGAGLGIGSAYTDC 128 (152)
Q Consensus 115 fGtGFGlG~AYsnC 128 (152)
+-+|||.|++|.-+
T Consensus 131 ll~~fG~G~s~~~~ 144 (153)
T d1mzja2 131 LMIGFGAGLSYAGQ 144 (153)
T ss_dssp EEEEEETTTEEEEE
T ss_pred EEEEEchhhhhhEE
Confidence 55678888877543
No 10
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}
Probab=6.02 E-value=51 Score=22.08 Aligned_cols=17 Identities=12% Similarity=0.257 Sum_probs=11.5
Q ss_pred eeeccccccchhhhhhh
Q 041737 113 VAFGAGLGIGSAYTDCS 129 (152)
Q Consensus 113 IafGtGFGlG~AYsnCq 129 (152)
..+-+|||.|++|.-|=
T Consensus 127 ~vll~g~G~G~s~ga~l 143 (149)
T d1ub7a2 127 HVLLVSFGAGLTWAAAV 143 (149)
T ss_dssp EEEEEEEETTTEEEEEE
T ss_pred EEEEEEEchHhhhEEEE
Confidence 34667888888876553
Done!